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At least 1,351 records · Page 75

Investigation of Turbulence Generated by Upwind Blockages at the Inlet of a 1/50th-Scale Model of the 80- by 120-Foot Wind Tunnel

A 1/50th scale model of the 80- by 120-Foot Wind Tunnel (hereafter referred to as the 80x120) was utilized to determine the magnitude of turbulence caused by buildings located upstream of the wind tunnel inlet. The 1/50th scale models of existing and proposed buildings were constructed to act as blockage for the test. Various inlet locations were sampled for turbulence intensity levels under a variety of blockage conditions including simple three-dimensional rectangular bodies creating quasi two-dimensional physics along the tunnel centerline, existing building structures in the vicinity of the full-scale wind tunnel inlet flow field, and proposed building structures that may someday be constructed at NASA Ames Research Center upwind of the inlet. Therefore, the testing performed and reported in this report can be considered representative of quiescent atmospheric conditions that exist when operating the full-scale 80x120 at night. At quiescent atmospheric conditions there is a measurable increase in turbulence intensity produced by upstream blockages. The blockages examined produced an average turbulence intensity level between 2% and 5% when measured at the inlet. Previous research has shown that the flow control of the 80x120 is capable of reducing this turbulence to less than 0.5% when measured in the test section. Additional research will need to be conducted to determine the influence of atmospheric wind on relative turbulence intensity at the inlet. These results show that for future buildings lying more than 1,000 ft upstream of the full-scale 80x120 inlet, these new buildings will have a negligible effect on the flow quality of the air entering the 80x120 test section under strictly quiescent atmospheric conditions. The Googleplex buildings modeled and tested in this experiment are located approximately 2,450 ft upstream and, as seen in this test campaign, have a negligible influence on the turbulence levels measured at the inlet under quiescent atmospheric conditions.

80- by 120-Foot Wind Tunnel↗

Additional Comparison of Iced Aerodynamic Measurements on a Swept Wing From Two Wind Tunnels

Artificial ice shapes of various geometric fidelity were tested on a wing model based on the Common Research Model. Low Reynolds number test were conducted at Wichita State University's Walter H. Beech Memorial Wind utilizing an 8.9% scale model, and high Reynolds number tests were conducted at ONERA's F1 wind tunnel utilizing a 13.3% scale model. Several identical geometrically-scaled ice shapes were tested at both facilities, and the results were compared at overlapping Reynolds and Mach numbers. This was to ensure that the results and trends observed at low Reynolds number could be applied and continued to high, near-flight Reynolds number. The data from Wichita State University and ONERA F1 agreed well at matched Reynolds and Mach numbers. The lift and pitching moment curves agreed very well for most configurations. This confirmed results from previous tests with other ice shapes that indicated the data from the low Reynolds number tests could be used to understand ice-swept-wing aerodynamics at high Reynolds number. This allows ice aerodynamics testing to be performed at low Reynolds number facilities with much lower operating costs and generate results that are applicable to flight Reynolds number.

Scale models↗

Closure of Fracture Due to Cover Stress Re-establishment After Coal Mining

In situ measurements of deformations, stresses, and closure of fractures, affecting water inflow following coal mining, are challenging due to the inaccessibility of fractured rock. Here, the authors studied the closure process of the fractured rock mass with the cover stress re-establishment based on a theoretical analysis and a scale model testing. A quantitative analysis is used to study the fracture distribution in the fractured zone. A function to describe a fracture aperture distribution in the fractured zone is proposed, which takes into account the curvature and thickness of the fractured rock. The theoretical analysis and a scale model testing both indicate that the cover stress re-establishment with mining distance increasing and the relationship between the fracture closure and cover stress re-establishment both satisfy a logarithmic function. The scale model test also shows the following features: (1) the fracture ratio (which is the fracture area divided by the total area of fracture and intact rock with a unit width in the vertical or horizontal direction) in the lower part of the fractured rock mass is greater than that in the upper part; (2) the initially fast decreased of fracture ratios is then followed by a slower decrease during the cover stress re-establishment process; (3) in the upper part of the rock mass, the vertical directional fractures with small apertures are being closed with cover stress re-establishment, which indicates an increase in the water resistance reducing the seepage from these parts of the fractured zone. This study improves the general understanding of the fracture closure process and cover stress re-establishment in the fractured rock mass after coal mining ceased, and provides a theoretical basis for water resource protection in case of underground coal mining.

58 GEOSCIENCES↗

Structurally flexible cloud microphysics, observationally constrained at all scales via ML-accelerated Bayesian inference

We discuss the challenge of developing observationally informed parameterizations of microphysics for use at a hierarchy of modeling scales. Our proposed approach is applicable to any domain that suffers from a two-fold parameterization problem, where physical processes are not resolved at the model scale (the first problem), and those processes are uncertain at any scale (the second problem). For such problems, a physical approach facilitates modeling across scales, as well as systematic observational inference accelerated by machine learning (ML) surrogate models, and quantification of physical uncertainties.

54 ENVIRONMENTAL SCIENCES↗

A detailed genome-scale metabolic model of Clostridium thermocellum investigates sources of pyrophosphate for driving glycolysis

Lignocellulosic biomass is an abundant and renewable source of carbon for chemical manufacturing, yet it is cumbersome in conventional processes. A promising, and increasingly studied, candidate for lignocellulose bioprocessing is the thermophilic anaerobe Clostridium thermocellum given its potential to produce ethanol, organic acids, and hydrogen gas from lignocellulosic biomass under high substrate loading. Possessing an atypical glycolytic pathway which substitutes GTP or pyrophosphate (PP i ) for ATP in some steps, including in the energy-investment phase, identification, and manipulation of PP i sources are key to engineering its metabolism. Previous efforts to identify the primary pyrophosphate have been unsuccessful. Here, we explore pyrophosphate metabolism through reconstructing, updating, and analyzing a new genome-scale stoichiometric model for C. thermocellum, iCTH669. Hundreds of changes to the former GEM, iCBI655, including correcting cofactor usages, addressing charge and elemental balance, standardizing biomass composition, and incorporating the latest experimental evidence led to a MEMOTE score improvement to 94%. We found agreement of iCTH669 model predictions across all available fermentation and biomass yield datasets. The feasibility of hundreds of PP i synthesis routes, newly identified and previously proposed, were assessed through the lens of the iCTH669 model including biomass synthesis, tRNA synthesis, newly identified sources, and previously proposed PP i -generating cycles. In all cases, the metabolic cost of PP i synthesis is at best equivalent to investment of one ATP suggesting no direct energetic advantage for the cofactor substitution in C. thermocellum. Even though no unique source of PP i could be gleaned by the model, by combining with gene expression data two most likely scenarios emerge. First, previously investigated PP i sources likely account for most PP i production in wild-type strains. Second, alternate metabolic routes as encoded by iCTH669 can collectively maintain PP i levels even when previously investigated synthesis cycles are disrupted. Model iCTH669 is available at github.com/maranasgroup/iCTH669.

59 BASIC BIOLOGICAL SCIENCES↗

Propulsion-induced aerodynamics of an ejector-configured STOVL fighter aircraft

Propulsion-induced aerodynamic effects are computed by using data obtained from tests of a full-scale model of the E-7A configuration that were run in the NASA Ames 40 x 80 and 80 x 120-foot tunnels. These effects are shown both in aerodynamic coefficients and nondimensionalized by thrust versus equivalent velocity. The test results show that the full-scale ventral nozzle-induced effects are smaller than scale model data, while the ejector-induced effects demonstrate fair agreement. The effect of tunnel test section size is primarily observed at low and static speed, high thrust conditions, as seen in comparisons of data from both tunnels. The 80 x 120-foot tunnel test gave better static thrust calibrations and permitted a greater range of test freestream velocities and angles-of-attack, extending the database provided by the full-scale model.

Poppen, William A.↗

Simulations of Cryogenic Line Chilldown with Advanced Sub-Grid Wall Boiling Models

A meso-scale model developed at MIT [2][11] for boiling processes in water was adapted for cryogens and demonstrated for chilldown of propellant transfer lines in both liquid nitrogen and hydrogen. The sub-grid boiling model accurately captures the contributions to heat transfer from the generation of bubble nuclei, growth, and interaction of the bubbles in the microlayer as well as quenching of the boiling surface following bubble departure. It was adapted for cryogenic fluids using thermodynamic scaling concepts taking into account non-dimensional pressures and temperatures that are scaled by the corresponding critical values for the fluid. The boiling model was demonstrated for line chilldown in liquid nitrogen (Darr et al. [6]). The predicted wall temperature at which quenching occurs was close to the test data while the slope of the temperature curve after quenching is initiated, showing a steeper variation than the test data. Simulations were also performed for liquid hydrogen by simulating experiments of Hartwig et al. [7]. Chilldown times in liquid hydrogen are much more rapid due to higher heat transfer in the film boiling regime and accounting for the higher turbulence levels were found to be important. Furthermore, at the much lower fluid temperatures in liquid hydrogen flows, accounting for the variable thermal properties of the solid material is critical and has a dramatic impact on the quench times. The need for additional studies to better understand the evolution of the quench front in liquid hydrogen was noted.

Computational Fluid Dynamics↗

Simulations of Cryogenic Line Chilldown with Advanced Sub-Grid Wall Boiling Models

A meso-scale model developed at MIT [2][11] for boiling processes in water was adapted for cryogens and demonstrated for chilldown of propellant transfer lines in both liquid nitrogen and hydrogen. The sub-grid boiling model accurately captures the contributions to heat transfer from the generation of bubble nuclei, growth, and interaction of the bubbles in the microlayer as well as quenching of the boiling surface following bubble departure. It was adapted for cryogenic fluids using thermodynamic scaling concepts taking into account non-dimensional pressures and temperatures that are scaled by the corresponding critical values for the fluid. The boiling model was demonstrated for line chilldown in liquid nitrogen (Darr et al. [6]). The predicted wall temperature at which quenching occurs was close to the test data while the slope of the temperature curve after quenching is initiated, showing a steeper variation than the test data. Simulations were also performed for liquid hydrogen by simulating experiments of Hartwig et al. [7]. Chilldown times in liquid hydrogen are much more rapid due to higher heat transfer in the film boiling regime and accounting for the higher turbulence levels were found to be important. Furthermore, at the much lower fluid temperatures in liquid hydrogen flows, accounting for the variable thermal properties of the solid material is critical and has a dramatic impact on the quench times. The need for additional studies to better understand the evolution of the quench front in liquid hydrogen was noted.

Computational Fluid Dynamics↗

A Genome-Scale Metabolic Model of Anabaena 33047 to Guide Genetic Modifications to Overproduce Nylon Monomers

Nitrogen fixing-cyanobacteria can significantly improve the economic feasibility of cyanobacterial production processes by eliminating the requirement for reduced nitrogen. Anabaena sp. ATCC 33047 is a marine, heterocyst forming, nitrogen fixing cyanobacteria with a very short doubling time of 3.8 h. We developed a comprehensive genome-scale metabolic (GSM) model, iAnC892, for this organism using annotations and content obtained from multiple databases. iAnC892 describes both the vegetative and heterocyst cell types found in the filaments of Anabaena sp. ATCC 33047. iAnC892 includes 953 unique reactions and accounts for the annotation of 892 genes. Comparison of iAnC892 reaction content with the GSM of Anabaena sp. PCC 7120 revealed that there are 109 reactions including uptake hydrogenase, pyruvate decarboxylase, and pyruvate-formate lyase unique to iAnC892. iAnC892 enabled the analysis of energy production pathways in the heterocyst by allowing the cell specific deactivation of light dependent electron transport chain and glucose-6-phosphate metabolizing pathways. The analysis revealed the importance of light dependent electron transport in generating ATP and NADPH at the required ratio for optimal N2 fixation. When used alongside the strain design algorithm, OptForce, iAnC892 recapitulated several of the experimentally successful genetic intervention strategies that over produced valerolactam and caprolactam precursors.

59 BASIC BIOLOGICAL SCIENCES↗

Water tunnel flow visualization and wind tunnel data analysis of the F/A-18

Six degree of freedom studies were utilized to extract a band of yawing and rolling moment coefficients from the F/A-18 aircraft flight records. These were compared with 0.06 scale model data obtained in a 16T wind tunnel facility. The results, indicate the flight test yawing moment data exhibit an improvement over the wind tunnel data to near neutral stability and a significant reduction in lateral stability (again to anear neutral level). These data are consistent with the flight test results since the motion was characterized by a relatively slo departure. Flight tests repeated the slow yaw departure at M 0.3. Only 0.16 scale model wind tunnel data showed levels of lateral stability similar to the flight test results. Accordingly, geometric modifications were investigated on the 0.16 scale model in the 30x60 foot wind tunnel to improve high angle of attack lateral stability.

Erickson, G. E.↗

Relative importance of social factors, conspecific density, and forest structure on space use by the endangered Red-cockaded Woodpecker: A new consideration for habitat restoration

Understanding how the interplay between social behaviors and habitat structure influences space use is important for conservation of birds in restored habitat. We integrated fine-grained LiDAR-derived habitat data, spatial distribution of cavity trees, and spatially explicit behavioral observations in a multi-scale model to determine the relative importance of conspecific density, intraspecific interactions, and the distribution of cavities on space use by Red-cockaded Woodpeckers (Picoides borealis) on 2 sites in South Carolina, USA. We evaluated candidate models using information theoretic methods. Top scale-specific models included effects of conspecific density and number of cavity tree starts within 200 m of Red-cockaded Woodpecker foraging locations, and effects of the number of intraspecific interactions within 400 m of Red-cockaded Woodpecker foraging locations. The top multi-scale model for 22 of 34 Red-cockaded Woodpecker groups included covariates for the number of groups within 200 m of foraging locations and LiDARderived habitat with moderate densities of large pines (Pinus spp.) and minimal hardwood overstory. These results indicate distribution of neighboring groups was the most important predictor of space use once a minimal set of structural habitat thresholds was reached, and that placing recruitment clusters as little as 400 m from foraging partitions of neighboring groups may promote establishment of new breeding groups in unoccupied habitat. The presence of neighboring groups likely provides cues to foraging Red-cockaded Woodpeckers that facilitate prospecting prior to juvenile dispersal and, to a lesser extent, indicates high-quality forage resources. Careful consideration of local distribution of neighboring groups in potential habitat may improve managers’ ability to increase Red-cockaded Woodpecker density on restored landscapes and mitigate isolation of Red-cockaded Woodpecker groups, a problem that negatively affects fitness across the species’ range.

60 APPLIED LIFE SCIENCES↗

Multiscale Modeling of the Uptake of Hydrogen Chloride on Anodized Aluminum in Relevance to Spacecraft Fire Safety

Fire safety is a critical component of space missions. An electrical fire within the spacecraft often produces gaseous hydrogen chloride (HCl) from the smoldering of wire insulation. These gases tend to stick to the interior materials of the spacecraft, which is often comprised of treated aluminum. Determining the rate of uptake for HCl by aluminum helps the safe design of the spacecraft to reduce catastrophic mission risk. Our previous studies showed that a one-step global reaction model for adsorption of HCl on aluminum is incapable of predicting the experimentally measured HCl uptake of anodized aluminum, compared to other treatments with thinner oxide layers. X-ray photoelectron spectroscopy revealed that aluminum chloride is found deep in the oxide layer of the anodized aluminum, implying that the transport of HCl within the oxide layer covering the aluminum surface must be considered. This work uses a multiscale modeling approach to predict the uptake of HCl. A pore model is developed wherein the HCl reacts with the aluminum oxide pore walls to create an aluminum chloride layer. The HCl then diffuses through that layer for further reaction, until the diffusion resistance grows too large, and the surface is said to be saturated. The pore model is then coupled with the reactor-scale model to predict overall HCl uptake. Results show that this new multiscale approach predicts the uptake of HCl far more accurately than previously used single-scale models.

Modeling↗

Evaluation of a Scaling Approach for Stiffened Composite Flat Panels Loaded in Compression

Results of an experimental study of the effects of geometric scaling on a graphite-epoxy flat stiffened-skin panel concept loaded in compression are presented. The scaled models were fabricated using an approach to laminate thickness scaling, referred to as the "ply-thickness method." The structural response and failure characteristics of full-, half-, and quarter-scale specimens fabricated with this scaling concept are discussed and compared. The scaled up failure loads of the half- and quarter-scale models agree well with the failure load of the full-scale prototypes tested. The strength scale effects observed in the results were substantially smaller than those in earlier studies that employed other laminate scaling techniques. The experimental results indicate that failure initiated by crippling and delamination in the cap of the longitudinal stiffeners and skin-stiffener separation at the bond-lines, and was followed by failure of the specimen skin. Nonlinear finite element analysis results correlate well with experimental results up to failure.

Rouse, Marshall↗

A genome-scale metabolic model for the denitrifying bacterium Thauera sp. MZ1T accurately predicts degradation of pollutants and production of polymers

The denitrifying bacterium Thauera sp . MZ1T, a common member of microbial communities in wastewater treatment facilities, can produce different compounds from a range of carbon (C) and nitrogen (N) sources under aerobic and anaerobic conditions. In these different conditions, Thauera modifies its metabolism to produce different compounds that influence the microbial community. In particular, Thauera sp . MZ1T produces different exopolysaccharides with floc-forming properties, impacting the physical disposition of wastewater consortia and the efficiency of nutrient assimilation by the microbial community. Under N-limiting conditions, Thauera sp . MZ1T decreases its growth rate and accelerates the accumulation of polyhydroxyalkanoate-related (PHA) compounds including polyhydroxybutyrate (PHB), which plays a fundamental role as C and energy storage in this β-proteobacterium. However, the metabolic mechanisms employed by Thauera sp . MZ1T to assimilate and catabolize many of the different C and N sources under aerobic and anaerobic conditions remain unknown. Systems biology approaches such as genome-scale metabolic modeling have been successfully used to unveil complex metabolic mechanisms for various microorganisms. Here, we developed a comprehensive metabolic model (M-model) for Thauera sp . MZ1T ( i Thauera861), consisting of 1,744 metabolites, 2,384 reactions, and 861 genes. We validated the model experimentally using over 70 different C and N sources under both aerobic and anaerobic conditions. i Thauera861 achieved a prediction accuracy of 95% for growth on various C and N sources and close to 85% for assimilation of aromatic compounds under denitrifying conditions. The M-model was subsequently deployed to determine the effects of substrates, oxygen presence, and the C:N ratio on the production of PHB and exopolysaccharides (EPS), showing the highest polymer yields are achieved with nucleotides and amino acids under aerobic conditions. This comprehensive M-model will help reveal the metabolic processes by which this ubiquitous species influences communities in wastewater treatment systems and natural environments.

Tec-Campos, Diego (ORCID:0000000188194150)↗

High‐quality genome‐scale metabolic modelling of Pseudomonas putida highlights its broad metabolic capabilities

Summary Genome‐scale reconstructions of metabolism are computational species‐specific knowledge bases able to compute systemic metabolic properties. We present a comprehensive and validated reconstruction of the biotechnologically relevant bacterium Pseudomonas putida KT2440 that greatly expands computable predictions of its metabolic states. The reconstruction represents a significant reactome expansion over available reconstructed bacterial metabolic networks. Specifically, i JN1462 (i) incorporates several hundred additional genes and associated reactions resulting in new predictive capabilities, including new nutrients supporting growth; (ii) was validated by in vivo growth screens that included previously untested carbon (48) and nitrogen (41) sources; (iii) yielded gene essentiality predictions showing large accuracy when compared with a knock‐out library and Bar‐seq data; and (iv) allowed mapping of its network to 82 P . putida sequenced strains revealing functional core that reflect the large metabolic versatility of this species, including aromatic compounds derived from lignin. Thus, this study provides a thoroughly updated metabolic reconstruction and new computable phenotypes for P . putida , which can be leveraged as a first step toward understanding the pan metabolic capabilities of Pseudomonas .

Microbiology↗

Further Investigation of Employing Binomial Small-Sample Estimator in M-LROM

Reduced Order Modeling (ROM) is essential to enable the identification of the so-called active parameter subspace for high-fidelity models that are employed in computationally intensive analyses such as uncertainty characterization and data assimilation. Given the complexity of models for real-world application, brute force methods to identify the active subspace may not be computationally efficient to realize the value of reduction, since in realistic problems, the full scale model must be executed few hundred times, which may be computationally taxing. Earlier work has introduced a new approach, which represents a further development of our previous work on ROM, referred to as multi-level ROM (M-LROM). In M-LROM, approximate models are employed to identify the active subspace instead of the full scale model. In this summary, we present our recent results on M-LROM, specifically in regard to the construction of reliable error metrics that can bound the errors resulting from the reduction. The idea is to employ a lower fidelity model, i.e., an approximation of the full scale or high fidelity model, to build the active subspace, and via the proposed error bound, the quality of the active subspace can be determined by calculating an upper bound on the errors resulting from the reduction. For this approach to be practical, the error bound must be realistic, implying that it should be close to the actual errors expected, and not much higher. Therefore, an important goal of this summary is to compare different error bounds in terms of the relation between their estimated bounds to the actual errors. In particular, we compare the proposed error bound which numerically construct an estimator using binomial distribution to the widely used small-sample norm estimators. Unlike most probabilistic error estimation methods, the proposed bound employs a binomial distribution to construct the estimator whereas in other conventional methods, the distribution employed is typically the standard Gaussian, normalized over a unit hypersphere as initially proposed by the seminal paper of J. Dixon on random matrix theory. Previous publications provided evidence that the binomial distribution calculates more realistic bounds as compared to the Gaussian distribution, which tends to be conservative, implying that the bound is much bigger than the actual errors, which diminishes the value of the reduction, as now must increase the size of the active subspace to reach the desired upper bound on the reduction errors. This work has provided a rigorous approach by which error bounds on the reduction errors can be established without having to execute the high fidelity model during the construction of the active subspace. The high fidelity model is only need to test the error bound using small number of executions. This methodology paves the way for a more efficient application of ROM to complex engineering models, where standard ROM techniques may be too taxing to optimally realize their value in practical situations. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗