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At least 1,351 records · Page 75

Plant density and enhanced plant vigor estimation for high-resolution images v1

The package contains algorithms for the estimation of sprout/plant density and the corresponding enhanced plant vigor from remotely sensed (RS) images. These algorithms aim to improve the plant characterization and monitoring in the early season when the soil component is significant compared to the plant spatial coverage. In such a scenario, the identification of sprouts (or plants) and the estimation of plant vegetation indexes can be performed only using UAV-acquired images. Additionally, because of the extremely high resolution, gridding becomes necessary to improve visualization and provide more informative maps. However, to capture the real range of values of the VIs, it is important to avoid the inclusion of those pixels belonging to the soil component. The sprout/plant density estimation algorithm takes in input a classification map and uses the vegetation class to estimates the plant density within a user-defined grid using a floating window. Similarly, the enhanced plant vigor algorithm takes in input the vegetation index and the classification map. The enhanced vegetation index is computed for each pixel as the average value among those pixels that belong to the vegetation class within a floating window. The software is developed for the MATLAB environment.

Falco, Nicola↗

hdsullivan/ResSR

This is the official implementation of ResSR [1]. ResSR is a computationally efficient MSI-SR method that achieves high-quality reconstructions by using a closed-form spectral decomposition along with a spatial residual correction. ResSR applies singular value decomposition to identify correlations across spectral bands, uses pixel-wise computation to upsample the MSI, and then applies a residual correction process to correct the high-spatial frequency components of the upsampled bands. While ResSR is formulated as the solution to a spatially-coupled optimization problem, we use pixel-wise regularization and derive an approximate closed-form solution, resulting in a pixel-wise algorithm with a dramatic reduction in computation that achieves state-of-the-art reconstructions. [1] Duba-Sullivan, H., Reid, E. J., Voisin, S., Bouman, C. A., & Buzzard, G. T. (2024). ResSR: A Computationally Efficient Residual Approach to Super-Resolving Multispectral Images. arXiv preprint arXiv:2408.13225.

Duba-Sullivan, Haley [Oak Ridge National Laborator↗

Photon noise correlations in millimeter-wave telescopes

Many modern millimeter and submillimeter (“mm-wave”) telescopes for astronomy are deploying more detectors by increasing the detector pixel density and, with the rise of lithographed detector architectures and high-throughput readout techniques, it is becoming increasingly practical to overfill the focal plane. However, when the pixel pitch p pix is small compared to the product of the wavelength λ and the focal ratio F , or p pix ≲1.2 F λ , the Bose term of the photon noise correlates between neighboring detector pixels due to the Hanbury Brown and Twiss (HBT) effect. When this HBT effect is non-negligible, the array-averaged sensitivity scales with the detector count N det less favorably than the uncorrelated limit of N det −1/2 . In this paper, we present a general prescription to calculate this HBT correlation based on a quantum optics formalism and extend it to polarization-sensitive detectors. We then estimate the impact of HBT correlations on the sensitivity of a model mm-wave telescope and discuss the implications for a focal plane design.

Hill, Charles A. (ORCID:0000000226416878)↗

Pan-arctic river bank erosion and accretion, and planform metrics measured over intervals ranging from 1973 to 2016

This dataset provides the tabular summary of analysis of 17 reaches of 15 Arctic rivers for river bank erosion and accretion rates, as well as, river channel properties such as channel width, bank curvature, and the aspect/orientation of the river banks. These rivers include the: Chandalar River, Alaska, Colville River, Alaska; Indigirka River, Russia; Kolyma River, Russia; Koyukuk River, Alaska; Lena River, Alaska; Noatak River, Alaska; Ob River, Russia; Pechora River, Russia; Tanana River, Alaska, Selawik River, Alaska; Taz River, Russia; Yana River, Russia; Yenisei River, Russia; and the Yukon River, Alaska. The dataset was generated from a total of 129 images including: Landsat, higher resolution satellite imagery, and aerial photography over time periods ranging from the 1970s and 2016. A full list of the image dates, row and path (for Landsat), and pixel resolutions is provided in the dataset. Masks for the Chandalar River, Tanana River, and Yukon at Holy Cross were obtained from Brown et al. (2020). The masks were analyzed using the Spatially Continuous Riverbank Erosion and Accretion Measurements (SCREAM) software detailed in Rowland et al. 2016. The masks used in this analysis can be found an accompanying dataset (doi:10.15485/1571527).In files with “summary” in the name, the data is provided at a pixel level, where each mapped bank pixel has an associated erosion or accretion value, a channel width, a curvature value, and an aspect each river and time period will have an individual file. Files with “Segments” in name provide data that is averaged along segments of the rivers. These data are consolidated into a single file each for the erosion and accretion measurements. These segments are approximately 10 channel widths in length. In addition to erosion and accretion rates, the segment-based results include area measurements of erosion and accretion, islands, and channels. Revisions 2023:-Data added for the Koyukuk River for time periods of 1978-2012, 1978-2018, and 2012-2018. ---Data added from the Chandalar River, Tanana River, and Yukon River at Holy Cross based on masks obtained from Brown et al. (2020).-Updated the values for Drainage area and river slope, see methods below-Added values for meant topographic slope for upstream contributing area, long term averaged annual maximum monthly flow, average annual maximum monthly flow for the time period of erosion record, and added the river slope extracted from the Lin et al. (2020) data product.-Add field for River Planform Multi threaded (M) or Single threaded-Added ‘ConsolidatedErosionSegments.csv’ which provides the same data as AllRiversErosionSegments.csv rebinned with averages along river segments based on upstream drainage area instead of channel segments based on lengths set to approximately 10 channel widths.

54 ENVIRONMENTAL SCIENCES↗

Aspen ploidy level and cover maps from NEON Airborne Observation Platform, 2018, Crested Butte, Colorado

Maps of aspen ploidy (diploid or triploid) developed using National Ecological Observatory Network (NEON) Airborne Observation Platform visible to shortwave infrared imaging spectroscopy data that were acquired over the Upper East River, Colorado in 2018. Maps of aspen distribution, as well as other land cover types that were used to screen for aspen dominated pixels are also provided. Each image file is provided as a GeoTiff with internal tiling and LZW compression. For use of ploidy maps, it is necessary to mask out non-aspen and shaded pixels. Shaded pixels are provided in an associated data package. For full details, please see associated publication and methods description. This dataset is associated with the publication in Ecological Applications.

54 ENVIRONMENTAL SCIENCES↗

Deployment of ADTimePix3 areaDetector Driver at Neutron and X-ray User Facilities

TimePix3 is a 65k hybrid pixel readout chip with simultaneous Time-of-Arrival (ToA) and Time-over-Threshold (ToT) recording in each pixel*. The chip operates without a trigger signal with a sparse readout where only pixels containing events are read out. The flexible architecture allows 40 MHits/s/cm² readout throughput, using simultaneous readout and acquisition by sharing readout logic with transport logic of superpixel matrix formed using 2x4 structure. The chip ToA records 1.5625 ns time resolution. The X-ray and charged particle events are counted directly. However, indirect neutron counts use 6Li fission in a scintillator matrix, such as ZnS(Ag). The fission space-charge region is limited to 5-9 um. A photon from scintillator material excites a photocathode electron, which is further multiplied in dual-stack MCP. The neutron count event is a cluster of electron events at the chip. We report on the EPICS areaDetector** ADTimePix3 driver that controls Serval*** using json commands. The driver directs data to storage and to a real-time processing pipeline and configures the chip. The time-stamped data are stored in raw .tpx3 file format and passed through a socket where the clustering software identifies individual neutron events. The conventional 2D images are available as images for each exposure frame, and a preview is useful for sample alignment. The areaDetector driver allows integration of time-enhanced capabilities of this detector into SNS beamlines controls and unprecedented time resolution.

Gofron, Kaz↗

Development of processing algorithms to enable high-rate microcalorimeter array operation

The millisecond-scale decay constants of microcalorimeter gamma-ray pulses present challenges for operation at high count rates needed to compete with semiconductor HPGe detectors. If using conventional optimal filtering methods, pulse records with pileup events are simply discarded, leading to a large fraction of data unused when count rates are large. For single pixel rates exceeding 1-2 Hz, improved pulse processing algorithms are needed to better deal with pileup and increase the filter throughput. A 256-pixel array operating at 10 Hz per pixel would provide a total counting rate of 2.5 kHz.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

3D, Flash, Induced Current Readout for Silicon Sensors

A new method for silicon microstrip and pixel detector readout using (1) 65 nm-technology current amplifers which can, for the first time with silicon microstrop and pixel detectors, have response times far shorter than the charge collection time (2) 3D trench electrodes large enough to subtend a reasonable solid angle at most track locations and so have adequate sensitivity over a substantial volume of pixel, (3) induced signals in addition to, or in place of, collected charge

47 OTHER INSTRUMENTATION↗

Focal Plane Array Low Background Testing (Focal Plane Array Characterization under a Low Background)

Most infra-red (IR) imagers for tactical applications use a direct injection (DI) input amplifier design. Fewer transistors in the unit cell allow the read-out electronic circuit (ROIC) to be minimized. This allows either more room for charge integration capacitors or finer pixel pitches. These ROICs work well at high background irradiance levels. However, at low background irradiance levels photocurrent inject efficiency for a DI unit cell amplifier is reduced. Some models have shown that this efficiency can drastically affect performance under low background conditions. The main benefit for Sandia National Laboratories (SNL) and L-3 Communications Cincinnati Electronics (L-3) was a better understanding of these types of sensors under low background conditions. It also provided the opportunity for an independent analysis of these sensors. The purpose of this project was to measure DI for low light levels under different operating temperatures of the L-3 CE103 a 1280 x 1024 indium antimonide 15 micron pitch detector. Results showed DI efficiency approaches 75% under extremely low light levels. Additionally, measured data didn't conform well to traditional circuit based models indicated that other effects are contributing to DI efficiency. A "spot scanning" PSF measurement was also conducted to measure pixel-to-pixel crosstalk for this array. Spot scanning data showed near ideal performance.

47 OTHER INSTRUMENTATION↗

Elementary Particle Physics

The UT Dallas High Energy Physics group collaborates on the ATLAS experiment which observes the world’s high energy proton-proton collisions. The UTD group utilized ATLAS 8 TeV Run 1 data to search for evidence of a “dark photon”, a gauge boson outside the “Standard Model of Particle Physics” that theorist hypothesize could mediate a force felt only by the dark matter particles that dominate out universe. The observable signature is a pair of prompt lepton jets. The results of this search were published in 2013. More recently, we have improved the sensitivity of the analysis using machine learning techniques, and we are extending the search to higher and lower mass dark photons using the ATLAS 13 TeV data set. Detection of a new fifth force would represent an important advance beyond the 4 known forces that influence baryonic matter. The LHC Long Shutdown 1 from 2013-2014 was a period of intense work on refurbishment and upgrades for the ATLAS Pixel community and the UTD group. The service quarter panels of the original Pixel detector were replaced, and the Insertable B Layer (IBL) detector was integrated. During IBL integration, UTD participated on the Stave Task Force that solved corrosion problems with IBL wire bonds. We developed a relative humidity sensor that was used during integration and transport to the beamline when detector was unpowered. The sensors were repurposed to monitor relative humidity inside the ID endplates until the built-in sensors were recommissioned. The UTD group worked on the connection of the Pixel and IBL at Point 1 and we were in charge of electric service testing. The IBL wire bond corrosion was the instigation for developing a new conformal coating method using an atomizing spray and Cellpack polyurethane. It is being considered for use in the ITk tracker upgrade. We have demonstrated its tolerance both of a 9 MGy ionizing dose and thermal expansion. Two UTD students are completing authorship qualification projects. One is helping understand variations in impact parameter resolution across different running periods. The second is developing a data-driven method to monitor the fraction of fake tracks in dense jets.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

The ETROC Project: Precision Timing ASIC Development for LGAD-based CMS Endcap Timing Layer (ETL) Upgrade

The ETROC (Endcap Timing Readout Chip) is being developed for the LGAD-based CMS Endcap Timing Layer (ETL) at HL-LHC. The ETL on each side of the interaction region will be instrumented with a two-disk system of MIP-sensitive LGAD silicon devices to be read out by ETROCs for precision timing measurement with down to 30 ps timing resolution. The ETROC is designed to handle a 16 x 16 pixel cell matrix, with each pixel cell being 1.3 mm x 1.3 mm to match the LGAD sensor pixel size. Approximately 15% of the sensors near the highest eta region will experience hadron fluence above 1e15 neq/cm² towards end of operation of HL-LHC, resulting in small signal amplitude with LGAD gain reduced to around 10. For this reason, the front-end design for preamplifier and discriminator has been specifically optimized for the reduced LGAD signals, with enough flexibilities to meet the ETL specific needs for time resolution, power budget and radiation profile.

97 MATHEMATICS AND COMPUTING↗

A New CIERRA Gridded Product Climatology for LIS/OTD

The GLM-CIERRA processing generates two products: A level-2 cluster feature dataset that merges flashes that should have been a single flash following the clustering algorithm flash definition (for GLM, this is due to the LCFA thresholds); A set of level-3 gridded products including Flash Extent Density, Convective Probability, etc. The CIERRA Level-3 products are generated on a 0.1 degree grid. This is suboptimal given the spatial variations in GLM pixel size AND the size of gridpoints in the output grid. As a stepping-stone towards developing improved GLM-CIERRA grids, I am testing pixel matching techniques on the LIS/OTD data. The goal is to maintain accuracy while vastly improving computational efficiency. The CIERRA reclustering codes are also being applied to LIS / OTD to merge flashes split by the “first fit” clustering technique. The end result will be standardized grids at the nominal resolution of each instrument (5 km for LIS, 10 km for OTD) that take into account the pixel geometry for each event that comprises a given reclustered flash.

54 ENVIRONMENTAL SCIENCES↗

Ultra low background time projection alpha particle detector ( Phase II Final Scientific/Technical Report)

When alpha particles are emitted into a gas they create an ionization track of gas ions and electrons. In our commercial UltraLo instrument we apply a voltage between a planar sample and an anode, integrate the anode signal as it collects the electrons, and distinguish between alphas emitted from the sample and elsewhere (anode, sidewalls) by the duration and shape of the resultant signal. The major contributors limiting the instrument’s lower detection limit are cosmic rays that pass through the detector close to the sample and Rn decays that produce charge tracks the originate in the gas and end on the sample. In this work we proposed to identify and reject these events by converting the anode into a multi-pixel array and operating in time projection mode. Cosmic rays would be eliminated by generating charge on many pixels, while charge collection asymmetry would distinguish between sample events (Bragg curve up) and Rn events (Bragg curve down). We therefore proposed to modify an UltraLo by pixilating its anode, developing low noise, low power multiplexed electronics to track each pixel’s signal individually, and develop analysis software to make the required discriminations.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Chamber Interior Viewing System (CIVS 2.0)

The NIF facility is used to conduct fusion and high-density scientific research. The experiments are conducted inside of a 10-meter diameter vacuum chamber called the “Target Chamber”. The target chamber is covered in ports to permit adding equipment to the exterior. Some of this equipment extends into the target chamber such as the target positioners and diagnostics. Other equipment sits on the surface and looks inward, such as the CIVS system. CIVS stands for Chamber Interior Viewing System. The CIVS system provides simple black and white digital images of the interior of the target chamber in real time. These images are used for positioner alignment, trouble shooting and observing for positioner collision. The views through these cameras need to be clear enough for the operators to safely conduct these tasks. One of the products of the experiments conducted in the target chamber are neutrons. These neutrons expand outward from the center of the target chamber with great energy. If the neutrons hit the sensor chip on a digital camera they will “kill” the sensor pixel where they contact, and the result will be a permanently bright white pixel on the image. Over time these “dead” pixels will build up and make the camera less and less usable providing a “staticky” image. The current solution of replacing the cameras when they become damaged is unsustainable due to both the cameras being out of production and the increased rate of camera failure based upon the increased number and energy of neutrons being generated. Current supplies of the correct camera type are dwindling with no source of replacement and the projected rate of replacement is unsustainable. Without a redesign, the function provided by the current CIVS system will be lost.

42 ENGINEERING↗

Characterization of ORNL PSD ASIC

The performance of the ORNL ASIC and its readout system was tested with pixelated organic scintillators. We use a pixelated trans-Stilbene scintillator array from Inrad Optics and a pixelated organic glass scintillator array developed at Sandia National Laboratories to characterize the energy and timing resolutions and the pulse-shape discrimination (PSD) figure-of-merit (FoM). The results are compared to previous work in which the same metrics were measured on waveforms digitized at 250 MHz with 14-bit resolution. We found that the PSD FoM at 340 keVee of the ASIC configuration compared to waveform data varied with the scintillator type. We measured a PSD FoM of 1.12 ± 0.14 with the ASIC configuration versus 1.39 ± 0.23 with waveform data using the trans-Stilbene array. We measured a PSD FoM of 0.52 ± 0.18 with the ASIC configuration versus 1.25 ± 0.19 with waveform data using the the organic glass scintillator array. The coincidence timing resolution was measured using two 6x6x6 mm 3 cubes of trans-Stilbene. It was measured to be 805 ± 9 ps with the ASIC configuration versus 300 ps on average with waveform data.

42 ENGINEERING↗

Dense Image Matching Uncertainty Estimation and Confidence Metrics

Dense stereo matching takes overlapping image pairs as input and outputs a disparity map which encodes pixel-by-pixel matches between the images. Recently, there has been an interest in ranking the quality, or even quantifying the accuracy, of disparity estimates. The proposed methods can be described as either uncertainty estimators or confidence metrics. Uncertainty estimators are a small minority of the research. However, they have the potential to be the most useful because they estimate disparity accuracy (in pixel units) that can be used to threshold matches or carried forward using error propagation. The majority of the research deals with confidence metrics which give an ordinal (or binary) ranking of a match’s quality relative to other matches. Confidence metrics do not have units and thus are useful primarily for thresholding matches from mismatches. The methods could also be described as handcrafted or deep-learning based. The majority of the research focused on outdoor driving scenes. Hence, our interest–application to a satellite semi-global matching pipeline–is a domain shift that may challenge deep-learning based methods. We conclude by recommending five handcrafted and two deep-learning based methods for evaluation in our pipeline.

97 MATHEMATICS AND COMPUTING↗

Digital Silicon Photomultiplier Chip Testing

Silicon Photomultipliers (SiPMs) are highly sensitive photodetectors. Traditional analog SiPMs require complex external readout electronics. Digital SiPMs (dSiPMs) include digital readout circuitry directly on-chip, offering superior timing resolution, reduced power consumption and compact size, pixel-level masking for active noise reduction. The primary objectives of this study are to, verify digital logic integrity of the shift registers used for controlling the pixel masking circuit, and determine the dark count rate of individual pixels as a function of bias voltage and clock frequency. I observe and explain behavior of the shift register and counting circuit.

Graham, Bennett [U. Chicago (main)]↗

DECAL MDN Resolution Calibration

The simulated pixelated calorimeter uses 0.1 mm × 0.1 mm silicon pixels (0.0001 cm²) silicon pixels as active layers — far finer than current concepts like HGCAL (~0.5 cm²) — improving energy resolution through much finer segmentation. While the standard resolution formalism fits three numbers to a handful of discrete test-beam energies, this work is a first try at a more data-efficient alternative: learning the full response shape continuously in energy with a mixture density network. This continuous, differentiable surrogate is a natural building block for fast simulation of extremely complex calorimeters.

Wang, Peter [U. Chicago (main)]↗