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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,351 records · Page 75
All sourcesNASA NTRSDOE OSTI
DOE OSTI2015

UNAMBIGUOUS DETECTION OF REFLECTION IN MAGNETIC CATACLYSMIC VARIABLES: JOINT NuSTAR–XMM-NEWTON OBSERVATIONS OF THREE INTERMEDIATE POLARS

In magnetic cataclysmic variables (CVs), X-ray emission regions are located close to the white dwarf surface, which is expected to reflect a significant fraction of intrinsic X-rays above 10 keV, producing a Compton reflection hump. However, up to now, a secure detection of this effect in magnetic CVs has largely proved elusive because of the limited sensitivity of non-imaging X-ray detectors. Here we report our analysis of joint NuSTAR–XMM-Newton observations of three magnetic CVs, V709 Cas, NY Lup, and V1223 Sgr. The improved hard X-ray sensitivity of the imaging NuSTAR data has resulted in the first robust detection of Compton hump in all three objects, with amplitudes of ∼1 or greater in NY Lup, and likely <1.0 in the other two. We also confirm earlier reports of a strong spin modulation above 10 keV in V709 Cas, and we report the first detection of small spin amplitudes in the others. We interpret this as due to different height of the X-ray emitting region among these objects. A height of ∼0.2 white dwarf radii provides a plausible explanation for the low reflection amplitude of V709 Cas. Since emission regions above both poles are visible at certain spin phases, this can also explain the strong hard X-ray spin modulation. A shock height of ∼0.05 white dwarf radii can explain our results on V1223 Sgr, while the shock height in NY Lup appears negligible.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2019

Joint linkage and association mapping of complex traits in shrub willow (Salix purpurea L.)

Abstract Background and Aims Increasing energy demands and the necessity to reduce greenhouse gas emissions are key motivating factors driving the development of lignocellulosic crops as an alternative to non-renewable energy sources. The effects of global climate change will require a better understanding of the genetic basis of complex adaptive traits to breed more resilient bioenergy feedstocks, like willow (Salix spp.). Shrub willow is a sustainable and dedicated bioenergy crop, bred to be fast-growing and high-yielding on marginal land without competing with food crops. In a rapidly changing climate, genomic advances will be vital for the sustained improvement of willow and other non-model bioenergy crops. Here, joint genetic mapping was used to exploit genetic variation garnered from both recent and historical recombination events in S. purpurea. Methods A panel of North American naturalized S. purpurea accessions and full-sib F2S. purpurea population were genotyped and phenotyped for a suite of morphological, physiological, pest and disease resistance, and wood chemical composition traits, collected from multi-environment and multi-year replicated field trials. Controlling for population stratification and kinship in the association panel and spatial variation in the F2, a comprehensive mixed model analysis was used to dissect the complex genetic architecture and plasticity of these important traits. Key Results Individually, genome-wide association (GWAS) models differed in terms of power, but the combined approach, which corrects for yearly and environmental co-factors across datasets, improved the overall detection and resolution of associated loci. Although there were few significant GWAS hits located within support intervals of QTL for corresponding traits in the F2, many large-effect QTL were identified, as well as QTL hotspots. Conclusions This study provides the first comparison of linkage analysis and linkage disequilibrium mapping approaches in Salix, and highlights the complementarity and limits of these two methods for elucidating the genetic architecture of complex bioenergy-related traits of a woody perennial breeding programme.

Plant Sciences↗
DOE OSTI2020

MOSAIC: a joint modeling methodology for combined circadian and non-circadian analysis of multi-omics data

Abstract Motivation Circadian rhythms are approximately 24-h endogenous cycles that control many biological functions. To identify these rhythms, biological samples are taken over circadian time and analyzed using a single omics type, such as transcriptomics or proteomics. By comparing data from these single omics approaches, it has been shown that transcriptional rhythms are not necessarily conserved at the protein level, implying extensive circadian post-transcriptional regulation. However, as proteomics methods are known to be noisier than transcriptomic methods, this suggests that previously identified arrhythmic proteins with rhythmic transcripts could have been missed due to noise and may not be due to post-transcriptional regulation. Results To determine if one can use information from less-noisy transcriptomic data to inform rhythms in more-noisy proteomic data, and thus more accurately identify rhythms in the proteome, we have created the Multi-Omics Selection with Amplitude Independent Criteria (MOSAIC) application. MOSAIC combines model selection and joint modeling of multiple omics types to recover significant circadian and non-circadian trends. Using both synthetic data and proteomic data from Neurospora crassa, we showed that MOSAIC accurately recovers circadian rhythms at higher rates in not only the proteome but the transcriptome as well, outperforming existing methods for rhythm identification. In addition, by quantifying non-circadian trends in addition to circadian trends in data, our methodology allowed for the recognition of the diversity of circadian regulation as compared to non-circadian regulation. Availability and implementation MOSAIC’s full interface is available at https://github.com/delosh653/MOSAIC. An R package for this functionality, mosaic.find, can be downloaded at https://CRAN.R-project.org/package=mosaic.find. Supplementary information Supplementary data are available at Bioinformatics online.

De los Santos, Hannah↗
DOE OSTI2020

Characterizing the uppermost 100 m structure of the San Jacinto fault zone southeast of Anza, California, through joint analysis of geological, topographic, seismic and resistivity data

We present results from complementary geological, topographic, seismic and electrical resistivity surveys at the Sagebrush Flat (SGB) site along the Clark fault (CF) strand of the San Jacinto fault zone trifurcation area southeast of Anza, California. Joint interpretation of these data sets, each with unique spatiotemporal sensitivities, allow us to better characterize the shallow (<100 m) fault zone at this structurally complex site. Geological mapping at the surface shows the CF has three main subparallel strands within a <100 m zone with varying degrees of rock damage. These strands intersect units of banded gneiss and tonalite, and various sedimentary units. Near the surface, the weathered but more intact tonalite and gneiss to the southwest have relatively high VP. The low-lying flat sedimentary basins around the two southwestern-most CF strands and elevated damaged gneiss to the northeast have lowest VP <500 m s–1. The high relief of the northeast gneiss unit may in part be explained by its extensive damage and inferred increased relative rock uplift. Resistivity imaging shows the unconsolidated dry basin sediments (maximum >1300 Ohm.m) contrasted against the compacted fine-grained (potentially wet) materials within the CF core and the Bautista Formation (minimum <40 Ohm.m), which is slightly elevated above the flat basins. The inverse relationship between VP (increases) and resistivity (decreases) in the uppermost ~15 m can be characterized as log–log linear with slopes of –2.6 to –4. At depths >30 m, the velocity heterogeneity near the surface merges into larger-scale structures that are generally slower on the northeast side of the CF core compared to the southwest side (as much as ~40 per cent reduction in average VP). A previous study revealed a 20–37 per cent variability in peak ground velocities across the SGB site from local earthquakes. The upper end of that range is associated with the near-surface unconsolidated sedimentary basins and northeast damaged gneiss unit. Preliminary analysis of time-dependent topography mostly shows effects of changing vegetation and anthropogenic activity.

Geochemistry & Geophysics↗
DOE OSTI2024

GLAD-M35: a joint P and S global tomographic model with uncertainty quantification

We present our third and final generation joint P and S global adjoint tomography (GLAD) model, GLAD-M35, and quantify its uncertainty based on a low-rank approximation of the inverse Hessian. Starting from our second-generation model, GLAD-M25, we added 680 new earthquakes to the database for a total of 2160 events. New P-wave categories are included to compensate for the imbalance between P- and S-wave measurements, and we enhanced the window selection algorithm to include more major-arc phases, providing better constraints on the structure of the deep mantle and more than doubling the number of measurement windows to 40 million. Two stages of a Broyden–Fletcher–Goldfarb–Shanno (BFGS) quasi-Newton inversion were performed, each comprising five iterations. With this BFGS update history, we determine the model’s standard deviation and resolution length through randomized singular value decomposition.

58 GEOSCIENCES↗
DOE OSTI2025

Seismic imaging of the Ecuadorian forearc and arc from joint ambient noise, local, and teleseismic tomography: catching the Nazca slab in the act of flattening

SUMMARY The Ecuadorian Andes are a complex region characterized by accreted oceanic terranes driven by the ongoing subduction of the oceanic Nazca plate beneath South America. Present-day tectonics in Ecuador are linked to the downgoing plate geometry featuring the subduction of the aseismic, oceanic Carnegie Ridge, which is currently entering the trench. Using seismic tomography, we jointly invert arrival times of P and S waves from local and teleseismic earthquakes with surface wave dispersion curves to image the structure of the forearc and magmatic arc of the Ecuadorian Andes. Our data set includes > 100 000 traveltimes recorded at 294 stations across Ecuador. Our images show the basement of the central forearc is composed of accreted oceanic terranes with high elastic wave speeds. Inboard of the Carnegie Ridge, the westernmost forearc and coastal cordilleras display relatively low Vp and Vs and high Vp/Vs values, which we attribute to the increased hydration and fracturing of the overriding plate due to the subduction of the thick oceanic crust of the Carnegie Ridge. We additionally image across-arc differences in magmatic architecture. The frontal volcanic arc overlies accreted terranes and is characterized by low velocities and high Vp/Vs indicative of partial melt reservoirs which are limited to the upper crust. In contrast, the main arc displays regions of partial melt across a wider range of depths. The Subandean zone of Ecuador has two active volcanoes built on continental crust suggesting the arc is expanding eastwards. The mid to lower crust does not show indications of being modified from the magmatic process. We infer that the slab is in the process of flattening as a consequence of early-stage subduction of the buoyant Carnegie Ridge.

58 GEOSCIENCES↗
DOE OSTI2024

Joint inference of multiplicative and additive systematics in galaxy density fluctuations and clustering measurements

Galaxy clustering measurements are a key probe of the matter density field in the Universe. With the era of precision cosmology upon us, surveys rely on precise measurements of the clustering signal for meaningful cosmological analysis. However, the presence of systematic contaminants can bias the observed galaxy number density, and thereby bias the galaxy two-point statistics. As the statistical uncertainties get smaller, correcting for these systematic contaminants becomes increasingly important for unbiased cosmological analysis. We present and validate a new method for understanding and mitigating both additive and multiplicative systematics in galaxy clustering measurements (two-point function) by joint inference of contaminants in the galaxy overdensity field (one-point function) using a maximum-likelihood estimator (MLE). We test this methodology with Kilo-Degree Survey-like mock galaxy catalogues and synthetic systematic template maps. We estimate the cosmological impact of such mitigation by quantifying uncertainties and possible biases in the inferred relationship between the observed and the true galaxy clustering signal. Our method robustly corrects the clustering signal to the sub-percent level and reduces numerous additive and multiplicative systematics from 1.5σ to less than 0.1σ for the scenarios we tested. In addition, we provide an empirical approach to identifying the functional form (additive, multiplicative, or other) by which specific systematics contaminate the galaxy number density. Even though this approach is tested and geared towards systematics contaminating the galaxy number density, the methods can be extended to systematics mitigation for other two-point correlation measurements.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2024

Project Dinos I: A joint lensing–dynamics constraint on the deviation from the power law in the mass profile of massive ellipticals

The mass distribution in massive elliptical galaxies encodes their evolutionary history, thus providing an avenue to constrain the baryonic astrophysics in their evolution. The power-law assumption for the radial mass profile in ellipticals has been sufficient to describe several observables to the noise level, including strong lensing and stellar dynamics. In this paper, we quantitatively constrained any deviation, or the lack thereof, from the power-law mass profile in massive ellipticals through joint lensing–dynamics analysis of a large statistical sample with 77 galaxy–galaxy lens systems. We performed an improved and uniform lens modelling of these systems from archival Hubble Space Telescope imaging using the automated lens modelling pipeline dolphin. We combined the lens model posteriors with the stellar dynamics to constrain the deviation from the power law after accounting for the line-of-sight lensing effects, a first for analyses on galaxy–galaxy lenses. We find that the Sloan Lens ACS Survey lens galaxies with a mean redshift of 0.2 are consistent with the power-law profile within 1.1σ (2.8σ) and the Strong Lensing Legacy Survey lens galaxies with a mean redshift of 0.6 are consistent within 0.8σ (2.1σ), for a spatially constant (Osipkov–Merritt) stellar anisotropy profile. We adopted the spatially constant anisotropy profile as our baseline choice based on previous dynamical observables of local ellipticals. However, spatially resolved stellar kinematics of lens galaxies are necessary to differentiate between the two anisotropy models. Future studies will use our lens models to constrain the mass distribution individually in the dark matter and baryonic components.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Developing an Evolutionary Baseline Model for Humans: Jointly Inferring Purifying Selection with Population History

Building evolutionarily appropriate baseline models for natural populations is not only important for answering fundamental questions in population genetics—including quantifying the relative contributions of adaptive versus nonadaptive processes—but also essential for identifying candidate loci experiencing relatively rare and episodic forms of selection (e.g., positive or balancing selection). Here, a baseline model was developed for a human population of West African ancestry, the Yoruba, comprising processes constantly operating on the genome (i.e., purifying and background selection, population size changes, recombination rate heterogeneity, and gene conversion). Specifically, to perform joint inference of selective effects with demography, an approximate Bayesian approach was employed that utilizes the decay of background selection effects around functional elements, taking into account genomic architecture. This approach inferred a recent 6-fold population growth together with a distribution of fitness effects that is skewed towards effectively neutral mutations. Importantly, these results further suggest that, although strong and/or frequent recurrent positive selection is inconsistent with observed data, weak to moderate positive selection is consistent but unidentifiable if rare.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2013

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a national user facility, serves the diverse scientific community by providing integrated high-throughput sequencing and computational analysis to enable system-based scientific approaches in support of DOE missions related to clean energy generation and environmental characterization. The JGI Genome Portal (http://genome.jgi.doe.gov) provides unified access to all JGI genomic databases and analytical tools. The JGI maintains extensive data management systems and specialized analytical capabilities to manage and interpret complex genomic data. A user can search, download and explore multiple data sets available for all DOE JGI sequencing projects including their status, assemblies and annotations of sequenced genomes. In this paper, we describe major updates of the Genome Portal in the past 2 years with a specific emphasis on efficient handling of the rapidly growing amount of diverse genomic data accumulated in JGI.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Building a custom high-throughput platform at the Joint Genome Institute for DNA construct design and assembly—present and future challenges

Abstract The rapid design and assembly of synthetic DNA constructs have become a crucial component of biological engineering projects via iterative design–build–test–learn cycles. In this perspective, we provide an overview of the workflows used to generate the thousands of constructs and libraries produced each year at the U.S. Department of Energy Joint Genome Institute. Particular attention is paid to describing pipelines, tools used, types of scientific projects enabled by the platform and challenges faced in further scaling output.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Cosmological inference from an emulator based halo model. II. Joint analysis of galaxy-galaxy weak lensing and galaxy clustering from HSC-Y1 and SDSS

Here, we present high-fidelity cosmology results from a blinded joint analysis of galaxy-galaxy weak lensing (ΔΣ) and projected galaxy clustering (w p ) measured from the Hyper Suprime-Cam Year-1 (HSC-Y1) data and spectroscopic Sloan Digital Sky Survey (SDSS) galaxy catalogs in the redshift range 0.15 < z < 0.7. We define luminosity-limited samples of SDSS galaxies to serve as the tracers of w p in three spectroscopic redshift bins, and as the lens samples for ΔΣ. For the ΔΣ measurements, we select a single sample of 4×10 6 source galaxies over 140 deg 2 from HSC-Y1 with photometric redshifts (photo z) greater than 0.75, enabling a better handle of photo- z errors by comparing the ΔΣ amplitudes for the three lens redshift bins. The deep, high-quality HSC-Y1 data enable significant detections of the ΔΣ signals, with integrated signal-to-noise ratio S/N ~ 15 in the range 3 ≤ R/[h –1 Mpc] ≤ 30 for the three lens samples, despite the small area coverage. For cosmological parameter inference, we use an input galaxy-halo connection model built on the dark emulator package (which uses an ensemble set of high-resolution N-body simulations and enables fast, accurate computation of the clustering observables) with a halo occupation distribution that includes nuisance parameters to marginalize over modeling uncertainties. We model the ΔΣ and wp measurements on scales from R≃3 and 2h –1 Mpc , respectively, up to 30 h –1 Mpc (therefore excluding the baryon acoustic oscillations information) assuming a flat Λ CDM cosmology, marginalizing over about 20 nuisance parameters and demonstrating the robustness of our results to them. With various tests using mock catalogs described in Miyatake et al. [preceding paper, Phys. Rev. D 106, 083519 (2022)], we show that any bias in the clustering amplitude S 8 ≡ σ 8 (Ω m /0.3) 0.5 due to uncertainties in the galaxy-halo connection is less than ~ 50 % of the statistical uncertainty of S 8 , unless the assembly biaseffect is unexpectedly large. Our best-fit models have S 8 = 0.795$_{-0.042}^{+0.049}$ (mode and 68% credible interval) for the flat Λ CDM model; we find tighter constraints on the quantity S 8 (α = 0.17)≡σ 8 (Ω m /0.3) 0.17 = 0.745$_{-0.031}^{+0.039}$.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2011

Top quark forward-backward asymmetry, flavor-changing neutral-current decays, and like-sign pair production as a joint probe of new physics

The anomaly of the top quark forward-backward asymmetry A{sub FB}{sup t} observed at the Tevatron can be explained by the t-channel exchange of a neutral gauge boson (Z{sup '}) which has sizable flavor-changing coupling for top and up quarks. This gauge boson can also induce the top quark flavor-changing neutral-current (FCNC) decays and the like-sign top pair production at the LHC. In this work, we focus on two models which predict such a Z', namely, the left-right model and the U(1){sub X} model, to investigate the correlated effects on A{sub FB}{sup t}, the FCNC decays t{yields}uV (V=g, Z, {gamma}) and the like-sign top pair production at the LHC. We also pay special attention to the most recently measured A{sub FB}{sup t} in the large top pair invariant mass region. We find that under the current experimental constraints both models can alleviate the deviation of A{sub FB}{sup t} and, meanwhile, enhance the like-sign top pair production to the detectable level of the LHC. We also find that the two models give different predictions for the observables and their correlations, and thus they may even be distinguished by jointly studying these top quark observables.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2017

Dark matter constraints from a joint analysis of dwarf Spheroidal galaxy observations with VERITAS

We present constraints on the annihilation cross section of weakly interacting massive particles dark matter based on the joint statistical analysis of four dwarf galaxies with VERITAS. These results are derived from an optimized photon weighting statistical technique that improves on standard imaging atmospheric Cherenkov telescope (IACT) analyses by utilizing the spectral and spatial properties of individual photon events.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

Joint Analysis of BICEP2/ Keck Array and Planck Data

Here, we report the results of a joint analysis of data from BICEP2/Keck Array and Planck . BICEP2 and Keck Array have observed the same approximately 400 deg 2 patch of sky centered on RA 0 h, Dec. -57.5°. The combined maps reach a depth of 57 nK deg in Stokes Q and U in a band centered at 150 GHz. Planck has observed the full sky in polarization at seven frequencies from 30 to 353 GHz, but much less deeply in any given region (1.2 μK deg in Q and U at 143 GHz). We detect 150×353 cross-correlation in B modes at high significance. We fit the single- and cross-frequency power spectra at frequencies ≥150 GHz to a lensed-ΛCDM model that includes dust and a possible contribution from inflationary gravitational waves (as parametrized by the tensor-to-scalar ratio r), using a prior on the frequency spectral behavior of polarized dust emission from previous Planck analysis of other regions of the sky. We find strong evidence for dust and no statistically significant evidence for tensor modes. We probe various model variations and extensions, including adding a synchrotron component in combination with lower frequency data, and find that these make little difference to the r constraint. Finally, we present an alternative analysis which is similar to a map-based cleaning of the dust contribution, and show that this gives similar constraints. Lastly,l the final result is expressed as a likelihood curve for r, and yields an upper limit r 0.05 < 0.12 at 95% confidence. Marginalizing over dust and r, lensing B modes are detected at 7.0σ significance.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2017

Threshold and Jet Radius Joint Resummation for Single-Inclusive Jet Production

Here, we present the first threshold and jet radius jointly resummed cross section for single-inclusive hadronic jet production. We work at next-to-leading logarithmic accuracy and our framework allows for a systematic extension beyond the currently achieved precision. Long-standing numerical issues are overcome by performing the resummation directly in momentum space within soft collinear effective theory. We present the first numerical results for the LHC and observe an improved description of the available data. Our results are of immediate relevance for LHC precision phenomenology including the extraction of parton distribution functions and the QCD strong coupling constant.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2022

Joint Measurement of the 235 U Antineutrino Spectrum by PROSPECT and STEREO

The PROSPECT and STEREO collaborations present a combined measurement of the pure 235 U antineutrino spectrum, without site specific corrections or detector-dependent effects. The spectral measurements of the two highest precision experiments at research reactors are found to be compatible with χ 2 /ndf = 24.1/21, allowing a joint unfolding of the prompt energy measurements into antineutrino energy. This $\bar{ν}_e$ energy spectrum is provided to the community, and an excess of events relative to the Huber model is found in the 5-6 MeV region. When a Gaussian bump is fitted to the excess, the data-model χ 2 value is improved, corresponding to a 2.4σ significance.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2025

First Joint Oscillation Analysis of Super-Kamiokande Atmospheric and T2K Accelerator Neutrino Data

The Super-Kamiokande and T2K Collaborations present a joint measurement of neutrino oscillation parameters from their atmospheric and beam neutrino data. It uses a common interaction model for events overlapping in neutrino energy and correlated detector systematic uncertainties between the two datasets, which are found to be compatible. Using 3244.4 days of atmospheric data and a beam exposure of 19.7⁢(16.3) × 10 20 protons on target in (anti)neutrino mode, the analysis finds a 1.9⁢𝜎 exclusion of 𝐶⁢𝑃 conservation (defined as 𝐽 𝐶⁢𝑃 = 0) and a 1.2⁢𝜎 exclusion of the inverted mass ordering.

Neutrino detection↗