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At least 1,351 records · Page 75

Enabling Real-Time Volume Rendering of Functional Magnetic Resonance Imaging on an iOS Device

Powerful non-invasive imaging technologies like computed tomography (CT), ultrasound, and magnetic resonance imaging (MRI) are used daily by medical professionals to diagnose and treat patients. While 2D slice viewers have long been the standard, many tools allowing 3D representations of digital medical data are now available. The newest imaging advancement, functional MRI (fMRI) technology, has changed medical imaging from viewing static to dynamic physiology (4D) over time, particularly to study brain activity. Add this to the rapid adoption of mobile devices for everyday work and the need to visualize fMRI data on tablets or smartphones arises. However, there are few mobile tools available to visualize 3D MRI data, let alone 4D fMRI data. Building volume rendering tools on mobile devices to visualize 3D and 4D medical data is challenging given the limited computational power of the devices. This paper describes research that explored the feasibility of performing real-time 3D and 4D volume raycasting on a tablet device. The prototype application was tested on a 9.7” iPad Pro using two different fMRI datasets of brain activity. The results show that mobile raycasting is able to achieve between 20 and 40 frames per second for traditional 3D datasets, depending on the sampling interval, and up to 9 frames per second for 4D data. While the prototype application did not always achieve true real-time interaction, these results clearly demonstrated that visualizing 3D and 4D digital medical data is feasible with a properly constructed software framework.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Balancing Open Science and Data Privacy in the Water Sciences

Open science practices such as publishing data and code are transforming water science by enabling synthesis and enhancing reproducibility. However, as research increasingly bridges the physical and social science domains (e.g., socio-hydrology), there is the potential for well-meaning researchers to unintentionally violate the privacy and security of individuals or communities by sharing sensitive information. Here we identify the contexts in which privacy violations are most likely to occur, such as working with high-resolution spatial data (e.g., from remote sensing), consumer data (e.g., from smart meters), and/or digital trace data (e.g., from social media). We also suggest practices for identifying and addressing privacy concerns at the individual, institutional, and disciplinary levels. We strongly advocate that the water science community continue moving toward open science and socio-environmental research and that progress toward these goals be rooted in open and ethical data management.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Abell 1430: A merging cluster with exceptional diffuse radio emission

Diffuse radio emission has been found in many galaxy clusters, predominantly in massive systems which are in the state of merging. The radio emission can usually be classified as relic or halo emission, which are believed to be related to merger shocks or volume-filling turbulence, respectively. Recent observations have revealed radio bridges for some pairs of very close galaxy clusters. The mechanisms that may allow one to explain the high specific density of relativistic electrons, which are necessary to explain the radio luminosity of these bridge regions, have been poorly explored until now. When inspecting the first data release of the LOFAR Two-Metre Sky Survey (LoTSS), we discovered diffuse radio emission in the galaxy cluster Abell 1430. Here, for this work, we aim to determine the dynamical state of the cluster and characterise the diffuse radio emission. We analysed the LoTSS data in detail and complemented them with recent Karl G. Jansky Very Large Array observations in the L-band. To study the dynamical state of the cluster, we analysed XMM-Newton data, Chandra data, and Sloan Digital Sky Survey data. Moreover, we compared our results to clusters extracted from THE THREE HUNDRED PROJECT cosmological simulation. We find that Abell 1430 consists of two components, namely A1430-A and A1430-B, with a mass ratio of about 2:1. The massive component shows diffuse radio emission which can be classified as radio halo which shows a low radio power at 1.4 GHz with respect to the mass of the cluster. Most interestingly, there is extended diffuse radio emission in the following dubbed as the ‘Pillow’ according to its morphology, which is apparently related to A1430-B and which is neither typical halo nor typical relic emission. The origin of this emission is puzzling. We speculate that the two components of Abell 1430 undergo an off-axis merger. In this scenario, A1430-B is moving towards the main cluster component and may have compressed and stirred the medium in the filament between the two cluster components. We have discovered evidence for diffuse radio emission related to the low-density intracluster or intergalactic medium in Abell 1430. To date, only a few examples of emission originating from such regions are known. These discoveries are crucial to constrain possible acceleration mechanisms which may allow us to explain the presence of relativistic electrons in these regions. In particular, our results indicate a spectral index of α 144 MHz 1.5 GHz = -1.4±0.5 for the Pillow. If upcoming observations confirm a slope as flat as -1.4 or even flatter, this would pose a challenge for the electron acceleration scenarios.

79 ASTRONOMY AND ASTROPHYSICS↗

The research data alliance photon and neutron science interest group

Scientific research data provides unique challenges that are distinct from classic “Big Data” sources. One common element in research data is that the experiment, observations, or simulation were designed, and data were specifically acquired, to shed light on an open scientific question. The data and methods are usually “owned” by the researcher(s) and the data itself might not be viewed to have long-term scientific significance after the results have been published. Often, the data volume was relatively low, with data sometimes easier to reproduce than to catalog and store. Some data and meta-data were not collected in a digital form, or were stored on antiquated or obsolete media. Generally speaking, policies, tools, and management of digital research data have reflected an ad hoc approach that varies domain by domain and research group by research group. This model, which treats research data as disposable, is proving to be a serious limitation as the volume and complexity of research data explodes. Changes are required at every level of scientific research: within the individual groups, and across scientific domains and interdisciplinary collaborations. Enabling researchers to learn about available tools, processes, and procedures should encourage a spirit of cooperation and collaboration, allowing researchers to come together for the common good. In conclusion, these community-oriented efforts provide the potential for targeted projects with high impact.

97 MATHEMATICS AND COMPUTING↗

Enhancing the Impact of Science Data: Toward Data Discovery and Reuse

The amount of data produced in support of scientific research continues to grow rapidly. Despite the accumulation and demand for scientific data, relatively little data are actually made available for the broader scientific community. We surmise that one root of this problem is the perceived difficulty of electronically publishing scientific data and associated metadata in a way that makes it discoverable. We propose exploiting Semantic Web technologies and best practices to make metadata both discoverable and easy to publish. We share experiences in curating metadata to illustrate the cumbersome nature of data reuse in the current research environment. We also make recommendations with a real-world example of how data publishers can provide their metadata by adding limited additional markup to HTML pages on the Web. With little additional effort from data publishers, the difficulty of data discovery, access, and sharing can be greatly reduced and the impact of research data greatly enhanced.

Data Curation↗

Automated storage and retrieval of data obtained in the Interkosmos project

The formation of a data bank and information retrieval system for scientific data is described. The stored data can be digital or documentation data. Data classification methods are discussed along with definition and compilation of the dictionary utilized, definition of the indexing scheme, and definition of the principles used in constructing a file for documents, data blocks, and tapes. Operating principles are also presented.

Ziolkovski, K.↗

Quantitative optical scanning tests of complex microcircuits

An approach for the development of the optical scanner as a screening inspection instrument for microcircuits involves comparing the quantitative differences in photoresponse images and then correlating them with electrical parameter differences in test devices. The existing optical scanner was modified so that the photoresponse data could be recorded and subsequently digitized. A method was devised for applying digital image processing techniques to the digitized photoresponse data in order to quantitatively compare the data. Electrical tests were performed and photoresponse images were recorded before and following life test intervals on two groups of test devices. Correlations were made between differences or changes in the electrical parameters of the test devices.

Erickson, J. J.↗

The Use of Multi-Source Satellite and Geospatial Data to Study the Effect of Urbanization of Primary Productivity in the United States

Data from two different satellites, a digital land cover map, and digital census data were analyzed and combined in a geographic information system to study the effect of urbanization on photosynthetic vegetation productivity in the United States. Results show that urbanization can have a measurable but variable impact on the primary productivity of the land surface. Annual productivity can be reduced by as much as 20 days in some areas, but in resource limited regions, photosynthetic production can be enhanced by human activity. Overall, urban development reduces the productivity of the land surface and those areas with the highest productivity are directly in the path of urban sprawl.

Imhoff, M. L.↗

A digital system to produce imagery from SAR data

This paper describes a digital processing algorithm and its associated system design for producing images from Synthetic Aperture Radar (SAR) data. The proposed system uses the Fast Fourier Transform (FFT) approach to perform the two-dimensional correlation process. The range migration problem, which is often a major obstacle to efficient processing, can be alleviated by approximating the locus of echoes from a point target by several linear segments. SAR data corresponding to each segment is correlated separately, and the results are coherently summed to produce full-resolution images. This processing approach exhibits greatly improved computation efficiency relative to conventional digital processing methods.

Wu, C.↗

Data reduction by computer processing

The automated analysis of remote sensing data, specifically digital processing of LANDSAT or other image data in numerical form was considered in a technical workshop which covered the teaching of digital image processing, including both theoretical and applied subjects and laboratory experience, and also reviewed NASA developed image processing software, and hardware/software systems employed at NASA-Ames Research Center in support of the Western Regional Applications Program (WRAP). A course titled Image Processing Lab, one of two courses required for a graduate minor in remote sensing at Arizona is examined as well as the rationale, content, and hardware/software support for this course.

Lumb, D. R.↗

Cloud cover estimation: Use of GOES imagery in development of cloud cover data base for insolation assessment

The potential of using digital satellite data to establish a cloud cover data base for the United States, one that would provide detailed information on the temporal and spatial variability of cloud development are studied. Key elements include: (1) interfacing GOES data from the University of Wisconsin Meteorological Data Facility with the Jet Propulsion Laboratory's VICAR image processing system and IBIS geographic information system; (2) creation of a registered multitemporal GOES data base; (3) development of a simple normalization model to compensate for sun angle; (4) creation of a variable size georeference grid that provides detailed cloud information in selected areas and summarized information in other areas; and (5) development of a cloud/shadow model which details the percentage of each grid cell that is cloud and shadow covered, and the percentage of cloud or shadow opacity. In addition, comparison of model calculations of insolation with measured values at selected test sites was accomplished, as well as development of preliminary requirements for a large scale data base of cloud cover statistics.

Huning, J. R.↗

The Eighteenth Data Release of the Sloan Digital Sky Surveys: Targeting and First Spectra from SDSS-V

The eighteenth data release (DR18) of the Sloan Digital Sky Survey (SDSS) is the first one for SDSS-V, the fifth generation of the survey. SDSS-V comprises three primary scientific programs or “Mappers”: the Milky Way Mapper (MWM), the Black Hole Mapper (BHM), and the Local Volume Mapper. This data release contains extensive targeting information for the two multiobject spectroscopy programs (MWM and BHM), including input catalogs and selection functions for their numerous scientific objectives. We describe the production of the targeting databases and their calibration and scientifically focused components. DR18 also includes ~25,000 new SDSS spectra and supplemental information for X-ray sources identified by eROSITA in its eFEDS field. We present updates to some of the SDSS software pipelines and preview changes anticipated for DR19. We also describe three value-added catalogs (VACs) based on SDSS-IV data that have been published since DR17, and one VAC based on the SDSS-V data in the eFEDS field.

79 ASTRONOMY AND ASTROPHYSICS↗

The Sloan Digital Sky Survey Quasar Catalog: Sixteenth Data Release

We present the final Sloan Digital Sky Survey IV (SDSS-IV) quasar catalog from Data Release 16 of the extended Baryon Oscillation Spectroscopic Survey (eBOSS). This catalog comprises the largest selection of spectroscopically confirmed quasars to date. The full catalog includes two subcatalogs (the current versions are DR16Q_v4 and DR16Q_Superset_v3 at https://data.sdss.org/sas/dr16/eboss/qso/DR16Q/): a "superset" of all SDSS-IV/eBOSS objects targeted as quasars containing 1,440,615 observations and a quasar-only catalog containing 750,414 quasars, including 225,082 new quasars appearing in an SDSS data release for the first time, as well as known quasars from SDSS-I/II/III. We present automated identification and redshift information for these quasars alongside data from visual inspections for 320,161 spectra. Here, the quasar-only catalog is estimated to be 99.8% complete with 0.3%-1.3% contamination. Automated and visual inspection redshifts are supplemented by redshifts derived via principal component analysis and emission lines. We include emission-line redshifts for Hα, Hβ, Mg II, C III], C IV, and Lyα. Identification and key characteristics generated by automated algorithms are presented for 99,856 broad absorption-line quasars and 35,686 damped Lyman alpha quasars. In addition to SDSS photometric data, we also present multiwavelength data for quasars from the Galaxy Evolution Explorer, UKIDSS, the Wide-field Infrared Survey Explorer, FIRST, ROSAT/2RXS, XMM-Newton, and Gaia. Calibrated digital optical spectra for these quasars can be obtained from the SDSS Science Archive Server.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Conversion of cardiac performance data in analog form for digital computer entry

A system is presented which will reduce analog cardiac performance data and convert the results to digital form for direct entry into a commercial time-shared computer. Circuits are discussed which perform the measurement and digital conversion of instantaneous systolic and diastolic parameters from the analog blood pressure waveform. Digital averaging over a selected number of heart cycles is performed on these measurements, as well as those of flow and heart rate. The determination of average cardiac output and peripheral resistance, including trends, is the end result after processing by digital computer.

Miller, R. L.↗

Preliminary Analysis of AVIRIS Data for Tectonostratigraphic Assessment of Northern Guerrero

The tectonostratigraphic evolution of the southern margin of North American Plate in Mexico is still in debate. Recent explanations assert Laramide age (Campanian-Eocene) accretion of far-traveled oceanic terranes (Campa and Coney, 1983; Sedlock et al. 1993). In 1989, we began an effort to bring new data to this debate through field mapping, incorporating Lansat Thematic Mapper and digital elevation data, along a 30km by 250km, east-west geologic transect on northern Guerrero State.

AVIRIS tectonostratigraphic evolution Laramide age↗

Animation and Visualization of Space Mission Data

Caltech's Jet Propulsion Laboratory (JPL) has been processing digital image data returned from remote sensing instruments on spacecraft sine the Mariner 4 spacecraft flew by Mars in 1964.

digital image processing techniqes↗