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At least 1,333 records · Page 74

Plasma equation of state accounting for ion core volume

Highlights: •Thermodynamically consistent Saha model accounting for non-point ion cores is constructed. •The applicability range of the model is expanded on superhigh densities and moderate temperatures. •Experimental verification of the model is performed which has demonstrated that the achieved accuracy is about 1% for pressures larger than 11 Mbar. -- Abstract: Equation of state for gaseous plasma is well described by the Saha model. In the present paper, we include accounting for finite ion core volumes into this model. This improvement allows to expand the Saha model on superhigh densities and moderate temperatures where plasma can be considered liquid. In this domain, thermodynamics of the Saha model is essentially close to the one of the Tomas–Fermi model which is conventionally used for condensed matter. To construct wide-range equation of state, we imply interpolation of the two mentioned models providing rigorous thermodynamic consistency. Comparison with experimental data on shock adiabats shows good agreement for a very wide range of pressures.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Orbital selectivity versus Pomeranchuk instability in the iron–chalcogenide superconductors: A two-loop renormalization group study

We perform a two-loop renormalization group (RG) analysis of a 2D effective multiband model, which is relevant for describing the low-energy properties of some iron–chalcogenide superconducting materials. Crucial ingredients in this analysis are the calculation of higher-order contributions in the RG scheme that go beyond the widely-used parquet approximation and the consequent inclusion of nontrivial self-energy effects of the model that yield an anisotropic renormalization of the quasiparticle weight in the system. The motivation of our work is the experimental discovery by Sprau et al. (2017) that orbitally-selective renormalization of the quasiparticle weight in the Hund’s metal phase at moderate temperatures underpins the highly unusual gap in the superconducting phase of the FeSe compound at lower temperatures. One prediction we arrive here is that the underlying origin of nematicity in these systems may indeed come from orbital-selectivity, instead of a Pomeranchuk instability in the d{sub ±} channel. This orbital selectivity is driven by the presence of stripe-type antiferromagnetic fluctuations in the model. Therefore, we argue that the present RG results may provide a scenario from a weak-to-moderate coupling perspective, in which the role of orbital selectivity to describe the physical properties of some iron–chalcogenide superconductors is emphasized.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Near-threshold incoherent pion photoproduction on the deuteron with final-state interaction effects

Highlights: • Incoherent pion photoproduction on the deuteron near threshold is investigated including rescattering effects. • For the first time, polarization observables are predicted near threshold. • The influence of NN-FSI effect is moderate in the π{sup 0}-production. • πN-rescattering has a noticeable contribution only in the π{sup 0}-production. • The unpolarized cross sections have a satisfactory agreement with experiment and other theories. - Abstract: Incoherent pion photoproduction on the deuteron γd→πNN is investigated in the energy region E{sub γ}{sup thr}≤E{sub γ}≤ 160 MeV. The model applied contains the amplitudes of the impulse approximation as well as the NN and πN rescattering in the final state. For the elementary γN→πN amplitude, the unitary isobar MAID-2007 model is used. This model is parameterized in terms of invariant amplitudes and allows one to give a more reliable description of the threshold region. The half-off-shell NN and πN scattering amplitudes are obtained from separable representations of realistic NN and πN interactions, respectively. For the first time, numerical results for the linear photon asymmetry Σ, vector T{sub 11} and tensor T{sub 2M} (M=0,1,2) deuteron spin asymmetries for the reactions γd→π{sup −}pp, γd→π{sup +}nn, and γd→π{sup 0}np are presented. In addition, results for the unpolarized differential and total cross sections are given. We found that the influence of NN rescattering is moderate in both charged-and neutral-pion production channels, whereas πN rescattering is almost negligible in the charged-pion production channels which is not the case in neutral-pion production since a noticeable contribution is obtained. The calculated results for unpolarized differential and total cross sections are compared with the available experimental data and other theoretical models, and a satisfactory agreement is obtained.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Low temperature dry reforming of methane using Ru-Ni-Mg/ceria-zirconia catalysts: Effect of Ru loading and reduction temperature

Dry reforming catalysts, especially those with activity at moderate temperatures, have been intensely investigated to enhance the conversion of biogas. Here, Ru is evaluated as a promoter for Ni-Mg based catalysts. Catalysts based on 1.4 wt%Ni-1.0 wt%Mg-Ce 0.6 Zr 0.4 O 2 with Ru (0.02–0.32 wt%) were prepared using incipient wetness. The reducibility of the catalysts and conversions increased with increasing Ru content. Increases in conversions with increasing Ru loading was attributed to the additional active sites and synergistic effect between Ru and Ni, which weakened Ni-Mg interactions. Samples showed dry reforming activity at low temperatures (450–510 °C). Reaction rates and activation energies of higher loading Ru samples (1.4 wt%Ni-1.0 wt%Mg/Ce 0.6 Zr 0.4 O 2 with 0.16 and 0.32 wt%Ru) decreased when the reduction temperature was raised from 300 to 400 °C. A 20 h TOS study showed stable catalytic activity with minimal coke deposition. Furthermore, the results suggest that Ru is an alternative to Pt in promoting low temperature dry reforming of methane.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A framework for estimating the energy-saving potential of occupant behaviour improvement

Energy-related occupant behaviour in buildings has demonstrated considerable energy-saving potential. However, the current modelling method of occupant behaviour does not give sufficient considerations on the implementation difficulty of behaviour and provide a holistic map from survey data to various behaviour models. This article proposes a holistic survey-and-simulation-based framework for estimating the energy-saving potential of occupant behaviour improvement. In the framework, seven typical categories of occupant behaviour models are identified based on the survey results. According to the implementation difficulty, the models are integrated into four behaviour styles (baseline, wasteful, moderate and austere) to represent different levels of energy-saving consciousness of occupants. Based on a case study with a nationwide survey in Singapore, there are remarkable energy savings potential if occupant behaviour is improved; the building energy consumption can be reduced by up to 9.5% with the moderate behaviour improvement, and up to 21.0% with the aggressive behaviour improvement. The simulation results accord well with the measured results within a reasonable range of deviation. The framework can be applied to estimate the energy-saving potential of occupant behaviour improvement in a building with affordable cost, and the findings can inform a behaviour improvement programme with effective and efficient measures.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Evaluation of a multi-scale WRF-CAM5 simulation during the 2010 East Asian Summer Monsoon

The Weather Research and Forecasting model with Chemistry (WRF-Chem) with the physics package of the Community Atmosphere Model Version 5 (CAM5) has been applied at multiple scales over Eastern China (EC) and the Yangtze River Delta (YRD) to evaluate how increased horizontal resolution with physics designed for a coarser resolution climate model impacts aerosols and clouds, and the resulting precipitation characteristics and performance during the 2010 East Asian Summer Monsoon (EASM). Despite large underpredictions in surface aerosol concentrations and aerosol optical depth, there is good spatial agreement with surface observations of chemical predictions, and increasing spatial resolution tends to improve performance. Model bias and normalized root mean square values for precipitation predictions are relatively small, but there are significant differences when comparing modeled and observed probability density functions for precipitation in EC and YRD. Increasing model horizontal resolution tends to reduce model bias and error for precipitation predictions. The surface and column aerosol loading is maximized between about 32N and 42N in early to mid-May during the 2010 EASM, and then shifts north while decreasing in magnitude during July and August. Changing model resolution moderately changes the spatiotemporal relationships between aerosols, cloud properties, and precipitation during the EASM, thus demonstrating the importance of model grid resolution in simulating EASM circulation and rainfall patterns over EC and the YRD. Results from this work demonstrate the capability and limitations in the aerosol, cloud, and precipitation representation of WRF-CAM5 for regional-scale applications down to relatively fine horizontal resolutions. Further WRF-CAM5 model development and application in this area is needed.

Campbell, Patrick↗

Analysis of aerosol cloud interactions with a consistent signal of meteorology and other influencing parameters

Quantifying the impact of aerosols on cloud micro/macro physical properties and estimating the signature of Aerosol Cloud Interactions (ACI) is one of the challenging tasks in atmospheric sciences. The Moderate Resolution Imaging Spectroradiometer and the European Centre for Medium-Range Weather Forecasts ERA-5 reanalysis data are employed to systematically study the ACI over the monsoon region in Pakistan. Based on the monsoon occurrence and rainfall intensity, the whole region is divided into three sub-regions labeled as highly intensive (R1), moderately intensive (R2) and weak (R3) monsoon region. The results indicate that the monthly mean Aerosol Optical Depth (AOD) peaks in the summer monsoon months (Jun, Jul, Aug, Sep). Here, the well-known Twomey effect whereby the Cloud Droplet Radius (CDR) decreases with increasing AOD holds only over R3; the opposite effects (Anti-Twomey effect) are found over R1 and R2, all passing the test of statistical significance (p<0.05). The multi-year AOD is found to be positively correlated with Cloud Liquid Water Path (CLWP) and Cloud Optical Depth (COD) over R1 and R2, suggesting that thicker clouds containing more water droplets are formed in polluted atmosphere. Over R3, decreases in CLWP and COD are found with increasing AOD only when AOD is less than~0.325. The analysis of ACI over R1 and R2 during the winter months shows similar but stronger responses of CDR, CLWP and COD to the variation in AOD. The weaker responses during the summer monsoon season may attributed to the occurrence of high level cloud and unstable atmospheric condition. Further investigation of the influences of Relative Humidity and pressure vertical velocity on the CDR-AOD relationships shows that although the magnitude of the CDR-AOD correlations change with meteorological conditions, the sign of correlations remain unchanged with meteorological conditions.

54 ENVIRONMENTAL SCIENCES↗

The mitochondrial ND1 m.3337G>A mutation associated to multiple mitochondrial DNA deletions in a patient with Wolfram syndrome and cardiomyopathy

Highlights: {yields} We reported a patient with Wolfram syndrome and dilated cardiomyopathy. {yields} We detected the ND1 mitochondrial m.3337G>A mutation in 3 tested tissues (blood leukocytes, buccal mucosa and skeletal muscle). {yields} Long-range PCR amplification revealed the presence of multiple mitochondrial deletions in the skeletal muscle. {yields} The deletions remove several tRNA and protein-coding genes. -- Abstract: Wolfram syndrome (WFS) is a rare hereditary disorder also known as DIDMOAD (diabetes insipidus, diabetes mellitus, optic atrophy, and deafness). It is a heterogeneous disease and full characterization of all clinical and biological features of this disorder is difficult. The wide spectrum of clinical expression, affecting several organs and tissues, and the similarity in phenotype between patients with Wolfram syndrome and those with certain types of respiratory chain diseases suggests mitochondrial DNA (mtDNA) involvement in Wolfram syndrome patients. We report a Tunisian patient with clinical features of moderate Wolfram syndrome including diabetes, dilated cardiomyopathy and neurological complications. The results showed the presence of the mitochondrial ND1 m.3337G>A mutation in almost homoplasmic form in 3 tested tissues of the proband (blood leukocytes, buccal mucosa and skeletal muscle). In addition, the long-range PCR amplifications revealed the presence of multiple deletions of the mitochondrial DNA extracted from the patient's skeletal muscle removing several tRNA and protein-coding genes. Our study reported a Tunisian patient with clinical features of moderate Wolfram syndrome associated with cardiomyopathy, in whom we detected the ND1 m.3337G>A mutation with mitochondrial multiple deletions.

60 APPLIED LIFE SCIENCES↗

Recombinant expression and solution structure of antimicrobial peptide aurelin from jellyfish Aurelia aurita

Highlights: Black-Right-Pointing-Pointer Aurelin was overexpressed in Escherichia coli, and its spatial structure was studied by NMR. Black-Right-Pointing-Pointer Aurelin compact structure encloses helical regions cross-linked by three disulfide bonds. Black-Right-Pointing-Pointer Aurelin shows structural homology to the BgK and ShK toxins of sea anemones. Black-Right-Pointing-Pointer Aurelin binds to the anionic lipid vesicles, but does not interact with zwitterionic ones. Black-Right-Pointing-Pointer Aurelin binds to DPC micelle surface with moderate affinity via two helical regions. -- Abstract: Aurelin is a 40-residue cationic antimicrobial peptide isolated from the mezoglea of a scyphoid jellyfish Aurelia aurita. Aurelin and its {sup 15}N-labeled analogue were overexpressed in Escherichia coli and purified. Antimicrobial activity of the recombinant peptide was examined, and its spatial structure was studied by NMR spectroscopy. Aurelin represents a compact globule, enclosing one 3{sub 10}-helix and two {alpha}-helical regions cross-linked by three disulfide bonds. The peptide binds to anionic lipid (POPC/DOPG, 3:1) vesicles even at physiological salt concentration, it does not interact with zwitterionic (POPC) vesicles and interacts with the DPC micelle surface with moderate affinity via two {alpha}-helical regions. Although aurelin shows structural homology to the BgK and ShK toxins of sea anemones, its surface does not possess the 'functional dyad' required for the high-affinity interaction with the K{sup +}-channels. The obtained data permit to correlate the modest antibacterial properties and membrane activity of aurelin.

60 APPLIED LIFE SCIENCES↗

Ex-vivo assessment and non-invasive in vivo imaging of internal hemorrhages in Aga2/+ mutant mice

Highlights: ► Aga2/+ mice, model for Osteogenesis imperfecta, have type I collagen mutation. ► Aga2/+ mice display both moderate and severe phenotypes lethal 6–11th postnatal. ► Internal hemorrhages studied in Aga2/+ vs. control mice at 6 and 9 days postnatal. ► Anatomical and functional findings in-vivo contrasted to the ex-vivo appearance. -- Abstract: Mutations in type I collagen genes (COL1A1/2) typically lead to Osteogenesis imperfecta, the most common heritable cause of skeletal fractures and bone deformation in humans. Heterozygous Col1a1{sup Aga2/+}, animals with a dominant mutation in the terminal C-propeptide domain of type I collagen develop typical skeletal hallmarks and internal hemorrhages starting from 6 day after birth. The disease progression for Aga2/+ mice, however, is not uniform differing between severe phenotype lethal at the 6–11th day of life, and moderate-to-severe one with survival to adulthood. Herein we investigated whether a new modality that combines X-ray computer tomography with fluorescence tomography in one hybrid system can be employed to study internal bleedings in relation to bone fractures and obtain insights into disease progression. The disease phenotype was characterized on Aga2/+ vs. wild type mice between 6 and 9 days postnatal. Anatomical and functional findings obtained in-vivo were contrasted to the ex-vivo appearance of the same tissues under cryo-slicing.

60 APPLIED LIFE SCIENCES↗

Differences in antiproliferative effect of STAT3 inhibition in HCC cells with versus without HBV expression

Chronic infection with hepatitis B virus (HBV) plays an important role in the etiology of hepatocellular carcinoma (HCC). Signal transducer and activator of transcription 3 (STAT3) inactivation could inhibit the tumor growth of HCC. In this study, differential antiproliferative effect of STAT3 inhibition was observed with HBV-related HCC cells being more resistant than non-HBV-related HCC cells. Resistance of HBV-related HCC cells to STAT3 inhibition was positively correlated to the expression of HBV. Enhanced ERK activation after STAT3 blockade was detected in HBV-related HCC cells but not in non-HBV-related HCC cells. Combined ERK and STAT3 inhibition eliminates the discrepancy between the two types of HCC cells. Moderate reduced HBV expression was found after STAT3 inhibition. These findings disclose a discrepancy in cellular response to STAT3 inhibition between non-HBV-related and HBV-related HCC cells and underscore the complexity of antiproliferative effect of STAT3 inactivation in HBV-related HCC cells. - Highlights: • HBV endows HCC cells with resistance to STAT3 inactivation on proliferation. • Abnormal ERK activation after STAT3 inhibition in HBV-related HCC cells. • Combined ERK and STAT3 inhibition eliminates the discrepancy. • STAT3 inhibition moderately reduces HBV expression.

60 APPLIED LIFE SCIENCES↗

The impact of endurance exercise on global and AMPK gene-specific DNA methylation

Alterations in gene expression as a consequence of physical exercise are frequently described. The mechanism of these regulations might depend on epigenetic changes in global or gene-specific DNA methylation levels. The AMP-activated protein kinase (AMPK) plays a key role in maintenance of energy homeostasis and is activated by increases in the AMP/ATP ratio as occurring in skeletal muscles after sporting activity. To analyze whether exercise has an impact on the methylation status of the AMPK promoter, we determined the AMPK methylation status in human blood samples from patients before and after sporting activity in the context of rehabilitation as well as in skeletal muscles of trained and untrained mice. Further, we examined long interspersed nuclear element 1 (LINE-1) as indicator of global DNA methylation changes. Our results revealed that light sporting activity in mice and humans does not alter global DNA methylation but has an effect on methylation of specific CpG sites in the AMPKα2 gene. These regulations were associated with a reduced AMPKα2 mRNA and protein expression in muscle tissue, pointing at a contribution of the methylation status to AMPK expression. Taken together, these results suggest that exercise influences AMPKα2 gene methylation in human blood and eminently in the skeletal muscle of mice and therefore might repress AMPKα2 gene expression. -- Highlights: •AMPK gene methylation increases after moderate endurance exercise in humans and mice. •AMPKα mRNA and protein decrease after moderate endurance exercise in mice. •Global DNA methylation is not affected under the same conditions.

60 APPLIED LIFE SCIENCES↗

Insight into the transition between the open and closed conformations of Thermus thermophilus carboxypeptidase

Carboxypeptidase cleaves the C-terminal amino acid residue from proteins and peptides. Here, we report the functional and structural characterizations of carboxypeptidase belonging to the M32 family from the thermophilic bacterium Thermus thermophilus HB8 (TthCP). TthCP exhibits a relatively broad specificity for both hydrophilic (neutral and basic) and hydrophobic (aliphatic and aromatic) residues at the C-terminus and shows optimal activity in the temperature range of 75–80 °C and in the pH range of 6.8–7.2. Enzyme activity was significantly enhanced by cobalt or cadmium and was moderately inhibited by Tris at 25 °C. We also determined the crystal structure of TthCP at 2.6 Å resolution. Two dimer types of TthCP are present in the crystal. One type consists of two subunits in different states, open and closed, with a C{sup α} RMSD value of 2.2 Å; the other type consists of two subunits in the same open state. This structure enables us to compare the open and closed states of an M32 carboxypeptidase. The TthCP subunit can be divided into two domains, L and S, which are separated by a substrate-binding groove. The L and S domains in the open state are almost identical to those in the closed state, with C{sup α} RMSD values of 0.84 and 0.53 Å, respectively, suggesting that the transition between the open and closed states proceeds with a large hinge-bending motion. The superimposition between the closed states of TthCP and BsuCP, another M32 family member, revealed that most putative substrate-binding residues in the grooves are oriented in the same direction. - Highlights: • The enzyme activity of TthCP was inhibited moderately by Tris molecule. • We solved the crystal structure of TthCP at 2.6 Å resolution. • The crystal structure of TthCP revealed both the open and closed conformations.

60 APPLIED LIFE SCIENCES↗

Discovery of a Kelch-like ECH-associated protein 1-inhibitory tetrapeptide and its structural characterization

Keap1 constitutively binds to the transcription factor Nrf2 to promote its degradation, resulting in negative modulation of genes involved in cellular protection against oxidative stress. Keap1 is increasingly recognized as an attractive target for treating diseases involving oxidative stress, including cancer, atherosclerosis, diabetes, arthritis, and neurodegeneration. We used phage-display peptide screening to identify a tetrapeptide showing moderate binding affinity, which inhibits the interaction between Nrf2 and Keap1. The tetrapeptide does not include an ETGE motif, which is a commonly found consensus sequence in known peptidic inhibitors. In addition to affinity parameters, IC{sub 50}, K{sub D}, and thermodynamic parameters, the crystal structure of the complex was determined to elucidate the binding conformation. The binding interactions resemble those of known small-molecule inhibitors as opposed to those of substrates and peptidic inhibitors. Although the tetrapeptide's affinity is not very high, our results may help facilitate the designing of small-molecule inhibitors during lead generation in drug discovery. - Highlights: • Keap1 inhibitory tetrapeptide with moderate affinity was discovered. • Crystal structure of the complex showed the unique binding mode. • Structural information gives a valuable insight for design of therapeutic compounds.

60 APPLIED LIFE SCIENCES↗

Fibulin-5 promotes airway smooth muscle cell proliferation and migration via modulating Hippo-YAP/TAZ pathway

Asthma is a common chronic disease mainly occurs from childhood. Increased airway smooth muscle mass is involved in the pathogenesis of asthma. Fibulin-5 was upregulated in the lung tissues of patients with COPD and idiopathic pulmonary fibrosis. This study aimed to investigate Fibulin-5 expression in asthmatic patients and the effect and mechanism of Fibulin-5 on the proliferation and migration of airway smooth muscle cells (ASMCs). The expression of Fibulin-5, YAP, and TAZ in the induced sputum of 38 asthmatic children (19 mild and 19 moderate asthmatics) and 19 healthy controls was determined. The effects and mechanisms of Fibulin-5 on the proliferation and migration of ASMCs were analyzed through upregulating Fibulin-5. We found compared with healthy controls, the expression of Fibulin-5, YAP, and TAZ was increased in the induced sputum of asthmatic children and much higher in moderate asthmatics. Fibulin-5 overexpression promoted the proliferation and migration of ASMCs, upregulated the expression of YAP and TAZ, and reduced the levels of p-YAP and p-TAZ. YAP inhibitor (Peptide 17) abrogated the proliferation and migration of ASMCs induced by Fibulin-5 overexpression in a dose-dependent manner. Additionally, Fibulin-5 overexpression enhanced its binding capacity of β1 integrin, and β1 integrin blocking antibody partly reversed the effect of Fibulin-5 overexpression on the levels of YAP and TAZ. In conclusion, Fibulin-5 expression is correlated with the pathogenesis of childhood asthma. It may function at least partly through binding to β1 integrin and modulating Hippo-YAP/TAZ pathway to promote the proliferation and migration of ASMCs. - Highlights: • Fibulin-5 expression is increased in the induced sputum of asthmatic patients. • Overexpression of Fibulin-5 promotes the proliferation and migration of ASMCs. • Fibulin-5 functions via modulating Hippo-YAP/TAZ signaling pathway. • Fibulin-5 binding to β1 integrin to activate YAP/TAZ signaling.

60 APPLIED LIFE SCIENCES↗

Role of pyroptosis in normal cardiac response to calorie restriction and starvation

Highlights: • Moderate and severe caloric restriction exert different effect on cardiomyocytes. • Moderate caloric restriction alleviates the progression of pyroptosis. • Severe caloric restriction promotes the progression of pyroptosis. An unhealthy diet is a major risk factor for cardiac diseases. Most researches focus on high fat diet, little is known about the detrimental effects of starvation on heart.

60 APPLIED LIFE SCIENCES↗