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At least 1,333 records · Page 74

Scalable 3D reconstruction for X-ray single particle imaging with online machine learning

X-ray free-electron lasers offer unique capabilities for measuring the structure and dynamics of biomolecules, helping us understand the basic building blocks of life. Notably, high-repetition-rate free-electron lasers enable single particle imaging, where individual, weakly scattering biomolecules are imaged under near-physiological conditions with the opportunity to access fleeting states that cannot be captured in cryogenic or crystallized conditions. Existing X-ray single particle reconstruction algorithms, which estimate the particle orientation for each image independently, are slow and memory-intensive when handling the massive datasets generated by emerging free-electron lasers. Here, we introduce X-RAI (X-Ray single particle imaging with Amortized Inference), an online reconstruction framework that estimates the structure of 3D macromolecules from large X-ray single particle datasets. X-RAI consists of a convolutional encoder, which amortizes pose estimation over large datasets, as well as a physics-based decoder, which employs an implicit neural representation to enable high-quality 3D reconstruction in an end-to-end, self-supervised manner. We demonstrate that X-RAI achieves state-of-the-art performance for small-scale datasets in simulation and challenging experimental settings and demonstrate its unprecedented ability to process large datasets containing millions of diffraction images in an online fashion. These abilities signify a paradigm shift in X-ray single particle imaging towards real-time reconstruction.

Computer science↗

Martian Dust Devils: Laboratory Simulations of Particle Threshold

An apparatus has been fabricated to simulate terrestrial and Martian dust devils. Comparisons of surface pressure profiles through the vortex core generated in the apparatus with both those in natural dust devils on Earth and those inferred for Mars are similar and are consistent with theoretical Rankine vortex models. Experiments to determine particle threshold under Earth ambient atmospheric pressures show that sand (particles > 60 micron in diameter) threshold is analogous to normal boundary-layer shear, in which the rotating winds of the vortex generate surface shear and hence lift. Lower-pressure experiments down to approx. 65 mbar follow this trend for sand-sized particles. However, smaller particles (i.e., dust) and all particles at very low pressures (w 10-60 mbar) appear to be subjected to an additional lift function interpreted to result from the strong decrease in atmospheric pressure centered beneath the vortex core. Initial results suggest that the wind speeds required for the entrainment of grains approx. 2 microns in diameter (i.e., Martian dust sizes) are about half those required for entrainment by boundary layer winds on both Earth and Mars.

Greeley, Ronald↗

Electron-Hadron Colliders: EIC, LHeC and FCC-eh

Electron-hadron colliders are the ultimate tool for high-precision quantum chromodynamics studies and provide the ultimate microscope for probing the internal structure of hadrons. The electron is an ideal probe of the proton structure because it provides the unmatched precision of the electromagnetic interaction, as the virtual photon or vector bosons probe the proton structure in a clean environment, the kinematics of which is uniquely determined by the electron beam and the scattered lepton, or the hadronic final state accounting appropriately for radiation. The Hadron Electron Ring Accelerator HERA (DESY, Hamburg, Germany) was the only electron-hadron collider ever operated (1991–2007) and advanced the knowledge of quantum chromodynamics and the proton structure, with implications for the physics studied in RHIC (BNL, Upton, NY) and the LHC (CERN, Geneva, Switzerland). Recent technological advances in the field of particle accelerators pave the way to realize next-generation electron-hadron colliders that deliver higher luminosity and enable collisions in a much broader range of energies and beam types than HERA. Electron-hadron colliders combine challenges from both electron and hadron machines besides facing their own distinct challenges derived from their intrinsic asymmetry. This review paper will discuss the major features and milestones of HERA and will examine the electron-hadron collider designs of the Electron-Ion Collider (EIC) currently under construction at BNL, the CERN’s Large Hadron electron Collider (LHeC), at an advanced stage of design and awaiting approval, and the Future Circular lepton-hadron Collider (FCC-eh).

43 PARTICLE ACCELERATORS↗

Effect of gravitational sedimentation on simulated aerosol dispersion in the human acinus

We studied the effect of gravitational sedimentation on the dispersion of 0.5 and 1 micrometer-diameter particle boluses within a two-dimensional symmetric six-generation model of the human acinus. Boluses were introduced at the beginning of a 2-s inspiration immediately followed by a 4-s expiration, in normal gravity (1 G) and in the absence of gravity (0 G). The flow corresponded to a flow rate at the mouth of 500 ml/s. In 0 G, simulated dispersion (Hsim) was 16 ml for both particle sizes. In 1 G, Hsim was 71 and 242 ml for 0.5 and 1 micrometer-diameter particles, respectively, showing the effect of gravitational sedimentation. The difference between experimental data (J. Appl. Physiol. 86 (1999) 1402) and simulations was independent of particle size. This suggests that the residual dispersion was independent of the intrinsic properties of the particles and was more likely due to other mechanisms such as ventilation inhomogeneities, cardiogenic oscillations and alveolar wall motion. c2003 Elsevier Science Ltd. All rights reserved.

short duration↗

Correlated charge noise and relaxation errors in superconducting qubits

In This report, the central challenge in building a quantum computer is error correction. Unlike classical bits, which are susceptible to only one type of error, quantum bits (“qubits”) are susceptible to two types of error, corresponding to flips of the qubit state about the X- and Z-directions. While the Heisenberg Uncertainty Principle precludes simultaneous monitoring of X- and Z-flips on a single qubit, it is possible to encode quantum information in large arrays of entangled qubits that enable accurate monitoring of all errors in the system, provided the error rate is low. Another crucial requirement is that errors cannot be correlated. Here, we characterize a superconducting multiqubit circuit and find that charge fluctuations are highly correlated on a length scale over 600 µm; moreover, discrete charge jumps are accompanied by a strong transient suppression of qubit energy relaxation time across the millimeter-scale chip. The resulting correlated errors are explained in terms of the charging event and phonon-mediated quasiparticle poisoning associated with absorption of gamma rays and cosmic-ray muons in the qubit substrate. Robust quantum error correction will require the development of mitigation strategies to protect multiqubit arrays from correlated errors due to particle impacts.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Laser wavelength dependence of particle acceleration mechanisms in high intensity laser–solid density plasma interactions

We investigate the generation of relativistic electrons and the subsequent ion acceleration due to target-normal sheath acceleration when ultra-intense (⁠ I > 10 18 W/cm 2 ⁠) short pulse (⁠ τ L < 10ps⁠) lasers are incident onto solid density targets as laser wavelength is varied. Scaling laws for the hot electron temperature, T hot ⁠, and the maximum ion energy, E max ⁠, are recast as a function of laser wavelength. These predictions are compared to results from particle-in-cell computer simulations in a variety of geometries, including cases where realistic plasma density profiles as determined by a radiation hydrodynamics code are used. It is found that the wavelength dependence observed in simulation is less pronounced than what is predicted from the well-established scaling laws. An assessment of how switching to longer laser wavelengths, specifically 2 μm Tm:YLF technology, would impact current high energy density science applications and diagnostics is made.

Electromagnetism↗

Robust impurity detection and tracking for tokamaks

A robust impurity detection and tracking code, able to generate large sets of dust tracks from tokamak camera footage, is presented. This machine learning–based code is tested with cameras from the Joint European Torus, Doublet-III-D, and Magnum-PSI and is able to generate dust tracks with a 65 – 100 % classification accuracy. Moreover, the number dust particles detected from a single camera shot can be up to the order of 1000. Several areas of improvement for the code are highlighted, such as generating more significant training data sets and accounting for selection biases. Finally, although the code is tested with dust in single two-dimensional camera views, it could easily be applied to multiple-camera stereoscopic reconstruction or nondust impurities.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Assessment of the associated particle technique with high-resolution gamma-ray spectroscopy for in-field identification of chemical warfare agents and explosives

In this work, high-resolution prompt γ-ray neutron activation analysis (PGNAA) is performed using the associated particle (AP) technique with a deuterium-tritium neutron generator and high-purity germanium detector. Although the time resolution is inferior compared to similar systems employing fast scintillation γ-ray detectors, the strong background suppression combined with the high γ-ray energy resolution provides an important boost in sensitivity to certain key elements, especially relevant to field measurements of complex chemicals encased within thick layers of metal, such as in the case of recovered chemical warfare (CW) munitions. Results for various CW and explosive simulants contained within mock munitions are presented and compared with results obtained from traditional PGNAA measurements without the aid of the AP technique. Significant improvements in identification and discrimination between certain chemicals are achieved with the high energy resolution AP technique.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Reversible Electron-Beam Patterning of Colloidal Nanoparticles at Fluid Interfaces

The directed self-assembly of colloidal nanoparticles (NPs) using external fields guides the formation of sophisticated hierarchical materials but becomes less effective with decreasing particle size. As an alternative, electron-beam-driven assembly offers a potential avenue for targeted nanoscale manipulation, yet remains poorly controlled due to the variety and complexity of beam interaction mechanisms. Here, we investigate the beam–particle interaction of silica NPs pinned to the fluid–vacuum interface of ionic liquid droplets. In these experiments, scanning electron microscopy of the droplet surface resolves NP trajectories over space and time while simultaneously driving their reorganization. With this platform, we demonstrate the ability to direct particle transport and create transient, reversible colloidal patterns on the droplet surface. By tuning the beam voltage, we achieve precise control over both the strength and sign of the beam–particle interaction, with low voltages repelling particles and high voltages attracting them. This response stems from the formation of well-defined solvent flow fields generated from trace radiolysis of the ionic liquid, as determined through statistical analysis of single-particle trajectories under varying solvent composition. Altogether, electron-beam-guided assembly introduces a versatile strategy for nanoscale colloidal manipulation, offering new possibilities for the design of dynamic, reconfigurable systems with applications in adaptive photonics and catalysis.

36 MATERIALS SCIENCE↗

The effects of pre-plasma scale length on the relativistic electron beam directionality

The effects of pre-plasmas on the electron beam directionality was experimentally and numerically investigated. Single material and layered targets made of Ti and/or CH were used to simultaneously measure high-energy (≥3 MeV) electrons along two directions, pre-pulse energy and pre-plasma density. The electron directionality is quantified by using a new parameter, the electron energy ratio of the total kinetic energies along the two directions. Measurements and radiation–hydrodynamic (RH) simulations show that a large (≥3.5 μm) plasma scale length at the critical surface enhances electrons along the laser axis, and such pre-plasma conditions could only be achieved with the CH targets. Particle-in-cell simulations were performed on the RH generated pre-plasmas from Ti and CH targets, and the results show that the CH target provided conditions for higher forward momentum gains by electrons. First, the CH target allowed longer distances for electrons to interact with laser. Second, the intense laser pulse modified the critical surface, but the resulting surface differed. The CH target resulted in a smooth surface where a retro-reflection was observed while the Ti target resulted in a rippled surface that scattered the reflected light. As results, the CH electrons gained higher forward momentum via a direct-laser-acceleration in the counter propagating laser fields. So the results presented in this article show a way of controlling the high-energy electron directionality.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Enhanced Detection of Primary Biological Aerosol Particles Using Machine Learning and Single-Particle Measurement

Accurately identifying primary biological aerosol particles (PBAPs) using analytical techniques poses inherent challenges due to their resemblance to other atmospheric carbonaceous particles. Here, we present a study of an enhanced method for detecting PBAPs by combining single-particle measurement with advanced supervised machine learning (SML) techniques. We analyzed ambient particles from a variety of environments and lab-generated standards, focusing on chemical composition for traditional rule-based and clustering approaches and incorporating morphological features into the SML approaches, neural networks and XGBoost, for improved accuracy. This study demonstrates that SML methods outperform traditional methods in quantifying PBAPs, achieving significant improvements in precision, recall, F1-score, and accuracy, leading to an increased number of detected PBAPs by at least 19%. The adaptability of the proposed XGBoost-based SML model is showcased in comparison to traditional methods in categorizing PBAPs for blind data sets from different geographical locations. Two field case studies were investigated, over agricultural land and Amazonia rain forest, representing relatively low and high concentrations of PBAPs, respectively, where XGBoost consistently detected up to 3.5 times more PBAPs than traditional methods. Precise detection of PBAPs in the atmosphere could significantly improve the prediction of climatic impacts by them.

42 ENGINEERING↗

Energetic Proton Acceleration By EMIC Waves in Io’s Footprint Tail

In this study, we present a survey of energetic proton observations associated with Io’s footprint tail (FPT) and compare their signatures with in situ measurements of the plasma waves and lower-energy electron environments. We find further supporting evidence that proton acceleration in Io’s FPT is likely a consequence of wave–particle interactions via electromagnetic ion cyclotron waves that are generated by precipitating electrons into Jupiter’s ionosphere. This idea was originally proposed by Clark et al. (2020) and Sulaiman et al. (2020) based on NASA’s Juno mission likely transiting Io’s Main Alfvén Wing (MAW) during its twelfth orbit (i.e., PJ12). Additionally, the analysis of > 50 keV protons presented here highlights important observational details about the Io–Jupiter interaction as follows: 1) proton acceleration in Io’s FPT is a persistent feature and the energy flux carried by the protons is highest at smaller Io-Alfvén tail distances; 2) energetic protons exhibit positive correlations with both plasma waves and <100 keV/Q electrons; 3) during a small number of Io FPT crossings, the protons display finer spatial/temporal structure reminiscent of the electron observations reported by Szalay et al. (2018); and 4) the proton pitch angle distributions are characterized by two types: conic distributions in or near Io’s MAW and isotropic elsewhere.

space physics↗

A numerical study of particle jetting in a dense particle bed driven by an air-blast

In this work, the particle jetting behavior in a blast-driven dense particle bed is studied at early times. Four-way coupled Euler–Lagrange simulations are performed using a high-order discontinuous Galerkin spectral element solver coupled with a high-order Lagrangian particle solver, wherein the inter-particle collisions are resolved using a discrete element method collision model. Following the experiments of Rodriguez et al. [“Formation of particle jetting in a cylindrical shock tube,” Shock Waves 23(6), 619–634 (2013)] and the simulations of Osnes et al. [“Numerical simulation of particle jet formation induced by shock wave acceleration in a Hele-Shaw cell,” Shock Waves 28(3), 451–461 (2018)], the simulations are performed in a quasi-two-dimensional cylindrical geometry (Hele-Shaw cell). Parametric studies are carried out to assess the impact of the coefficient of restitution and the strength of the incident shock on the particle jetting behavior. The deposition of vorticity through a multiphase (gas–particle) analog of Richtmyer–Meshkov instability is observed to play a crucial role in channeling the particles into well-defined jets at the outer edge of the particle bed. This is confirmed by the presence of vortex pairs around the outer jets. Furthermore, the effect of the relaxation of the relative velocity between the two phases on the vorticity generation is explored by analyzing the correlation between the radial velocity of particles and the radial velocity of the gas at the particle location.

42 ENGINEERING↗

Improving High-Energy Particle Detectors with Machine Learning

Microseconds after the Big Bang, the universe existed in a state called the quark-gluon plasma (QGP). To experimentally study its properties, the QGP is recreated in high-energy nuclear collisions at the LHC, and the particles produced from the QGP are reconstructed from their energy deposition in the ATLAS calorimeter. This requires both classifying the particles and calibrating their deposited energy. The objective of this project is to improve the reconstruction by using machine learning techniques, where the energy depositions of clusters of cells, formed by ATLAS topo-clustering methods, are treated as three-dimensional images when inputted to neural networks. This approach significantly improves the calibration of deposited energies when cross-validating while training, and models trained on idealized data predict the calibrated energies of particles in more complex data sets well. Additionally, implementation of a data generator using uproot allows the program to load input data into memory as needed while training or predicting, significantly reducing the amount of memory used. The data generator also allows for use of multiprocessing to speed up training and evaluating. This work illustrates that using machine learning methods for both classification and calibration has the potential to significantly improve particle reconstruction.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Wavelength scaling and multicolor operation of a plasma-driven attosecond x-ray source via harmonic generation

The generation of high-power coherent soft x-ray pulses of sub-100 as duration and 10 nm wavelength using beams from a GeV energy plasma wakefield accelerator has been recently investigated in Emma []. As a future upgrade to this concept, this contribution investigates scaling to shorter x-ray wavelengths by cascading undulators tuned to higher harmonics of the fundamental. We present two simulation studies for plasma-driven attosecond harmonic generation schemes with final photon wavelengths of 2 and 0.40 nm. We demonstrate in these schemes that using undulators with retuned fundamental frequencies can produce GW-scale pulses of sub-nm radiation with tens of attosecond-scale pulse lengths, an order of magnitude shorter than current state-of-the-art attosecond x-ray free electron lasers (XFELs). This multipulse multicolor operation will be broadly applicable to attosecond pump-probe experiments. Published by the American Physical Society 2024

43 PARTICLE ACCELERATORS↗

Impact of dark matter on tidal signatures in neutron star mergers with the Einstein Telescope

If dark matter (DM) accumulates inside neutron stars (NS), it changes their internal structure and causes a shift of the tidal deformability from the value predicted by the dense-matter equation of state (EOS). In principle, this shift could be observable in the gravitational-wave (GW) signal of binary neutron star (BNS) mergers. We investigate the effect of fermionic, noninteracting DM when observing a large number of GW events from DM-admixed BNSs with the precision of the proposed Einstein telescope (ET). Specifically, we study the impact on the recovery of the baryonic EOS and whether DM properties can be constrained. For this purpose, we create event catalogs of BNS mock events with DM fraction up to 1%, from which we reconstruct the posterior uncertainties with the Fisher matrix approach. Using this data, we perform joint Bayesian inference on the baryonic EOS, DM particle mass, and DM particle fraction in each event. Here, our results reveal that when falsely ignoring DM effects, the EOS posterior is biased toward softer EOSs, though the offset is rather small. Further, we find that within our assumptions of our DM model and population, ET will likely not be able to test the presence of DM in BNSs, even when combining many events and adding Cosmic Explorer (CE) to the next-generation detector network. Likewise, the potential constraints on the DM particle mass will remain weak because of degeneracies with the fraction and EOS.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

X-rays from radio pulsars - The portable supernova remnants

Neutron stars are the longest-lived remnants of supernova explosions. As a reservoir of thermal energy remaining from the explosion and generated by frictional coupling between core and crust, as a storehouse of magnetic and rotational kinetic energy which allows the star to act as a high energy particle accelerator, and as the source of a deep gravitational potential which can generate heat from infalling matter, neutron stars remain capable of producing high energy radiation for a Hubble time. The results of an extensive survey of supernova remnants and radio pulsars performed with the imaging instruments on board the Einstein Observatory are reviewed and the implications of these results for pulsar physics and for the origin and evolution of galactic neutron stars are discussed.

Helfand, D. J.↗

Reconnection-driven Particle Acceleration in Relativistic Shear Flows

Particle energization in shear flows is invoked to explain nonthermal emission from the boundaries of relativistic astrophysical jets. Yet the physics of particle injection, i.e., the mechanism that allows thermal particles to participate in shear-driven acceleration, remains unknown. With particle-in-cell simulations, we study the development of Kelvin–Helmholtz (KH) instabilities seeded by the velocity shear between a relativistic magnetically dominated electron–positron jet and a weakly magnetized electron–ion ambient plasma. Here, we show that, in their nonlinear stages, KH vortices generate kinetic-scale reconnection layers, which efficiently energize the jet particles, thus providing a first-principles mechanism for particle injection into shear-driven acceleration. Our work lends support to spine-sheath models of jet emission—with a fast core/spine surrounded by a slower sheath —and can explain the origin of radio-emitting electrons at the boundaries of relativistic jets.

79 ASTRONOMY AND ASTROPHYSICS↗