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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,333 records · Page 74
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Local Structure Analysis and Modelling of Lignin‐Based Carbon Composites through the Hierarchical Decomposition of the Radial Distribution Function

Abstract Carbonized lignin has been proposed as a sustainable and domestic source of activated, amorphous, graphitic, and nanostructured carbon for many industrial applications as the structure can be tuned through processing conditions. However, the inherent variability of lignin and its complex physicochemical structure resulting from feedstock and pulping selection make the Process‐Structure‐Property‐Performance (PSPP) relationships hard to define. In this work, radial distribution functions (RDFs) from synchrotron X‐ray and neutron scattering of lignin‐based carbon composites (LBCCs) are investigated using the Hierarchical Decomposition of the Radial Distribution Function (HDRDF) modelling method to characterize the local atomic environment and develop quantitative PSPP relationships. PSPP relationships for LBCCs defined by this work include crystallite size dependence on lignin feedstock as well as increasing crystalline volume fraction, nanoscale composite density, and crystallite size with increasing reduction temperature.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2021

The Arabidopsis thaliana nucleotide sugar transporter GONST2 is a functional homolog of GONST1

Abstract Glycosylinositolphosphorylceramides (GIPCs) are the predominant lipid in the outer leaflet of the plasma membrane. Characterized GIPC glycosylation mutants have severe or lethal plant phenotypes. However, the function of the glycosylation is unclear. Previously, we characterized Arabidopsis thaliana GONST1 and showed that it was a nucleotide sugar transporter which provides GDP‐mannose for GIPC glycosylation. gonst1 has a severe growth phenotype, as well as a constitutive defense response. Here, we characterize a mutant in GONST1’s closest homolog, GONST2. The gonst2‐ 1 allele has a minor change to GIPC headgroup glycosylation. Like other reported GIPC glycosylation mutants, gonst1‐1gonst2‐1 has reduced cellulose, a cell wall polymer that is synthesized at the plasma membrane. The gonst2‐1 allele has increased resistance to a biotrophic pathogen Golovinomyces orontii but not the necrotrophic pathogen Botrytis cinerea . Expression of GONST2 under the GONST1 promoter can rescue the gonst1 phenotype, indicating that GONST2 has a similar function to GONST1 in providing GDP‐D‐Man for GIPC mannosylation.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination

Abstract The Salicaceae family is of growing interest in the study of dioecy in plants because the sex determination region (SDR) has been shown to be highly dynamic, with differing locations and heterogametic systems between species. Without the ability to transform and regenerate Salix in tissue culture, previous studies investigating the mechanisms regulating sex in the genus Salix have been limited to genome resequencing and differential gene expression, which are mostly descriptive in nature, and functional validation of candidate sex determination genes has not yet been conducted. Here, we used Arabidopsis to functionally characterize a suite of previously identified candidate genes involved in sex determination and sex dimorphism in the bioenergy shrub willow Salix purpurea . Six candidate master regulator genes for sex determination were heterologously expressed in Arabidopsis, followed by floral proteome analysis. In addition, 11 transcription factors with predicted roles in mediating sex dimorphism downstream of the SDR were tested using DAP‐Seq in both male and female S. purpurea DNA. The results of this study provide further evidence to support models for the roles of ARR17 and GATA15 as master regulator genes of sex determination in S. purpurea , contributing to a regulatory system that is notably different from that of its sister genus Populus . Evidence was also obtained for the roles of two transcription factors, an AP2 / ERF family gene and a homeodomain‐like transcription factor, in downstream regulation of sex dimorphism.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

A phosphorylation-deficient ribosomal protein eS6 is largely functional in Arabidopsis thaliana , rescuing mutant defects from global translation and gene expression to photosynthesis and growth

The eukaryote-specific ribosomal protein of the small subunit eS6 is phosphorylated through the target of rapamycin (TOR) kinase pathway. Although this phosphorylation event responds dynamically to environmental conditions and has been studied for over 50 years, its biochemical and physiological significance remains controversial and poorly understood. Here, we report data from Arabidopsis thaliana, which indicate that plants expressing only a phospho-deficient isoform of eS6 grow essentially normally under laboratory conditions. The eS6z (RPS6A) paralog of eS6 functionally rescued a double mutant in both rps6a and rps6b genes when expressed at approximately twice the wild-type dosage. A mutant isoform of eS6z lacking the major six phosphorylatable serine and threonine residues in its carboxyl-terminal tail also rescued the lethality, rosette growth, and polyribosome loading of the double mutant. This isoform also complemented many mutant phenotypes of rps6 that were newly characterized here, including photosynthetic efficiency, and most of the gene expression defects that were measured by transcriptomics and proteomics. However, compared with plants rescued with a phospho-enabled version of eS6z, the phospho-deficient seedlings retained a mild pointed-leaf phenotype, root growth was reduced, and certain cell cycle-related mRNAs and ribosome biogenesis proteins were misexpressed. The residual defects of the phospho-deficient seedlings could be understood as an incomplete rescue of the rps6 mutant defects. There was little or no evidence for gain-of-function defects. As previously published, the phospho-deficient eS6z also rescued the rps6a and rps6b single mutants; however, phosphorylation of the eS6y (RPS6B) paralog remained lower than predicted, further underscoring that plants can tolerate phospho-deficiency of eS6 well. Our data also yield new insights into how plants cope with mutations in essential, duplicated ribosomal protein isoforms.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

A core of cell wall proteins functions in wall integrity responses in Arabidopsis thaliana

Abstract Cell walls surround all plant cells, and their composition and structure are tightly regulated to maintain cellular and organismal homeostasis. In response to wall damage, the cell wall integrity (CWI) system is engaged to ameliorate effects on plant growth. Despite the central role CWI plays in plant development, our current understanding of how this system functions at the molecular level is limited. Here, we investigated the transcriptomes of etiolated seedlings of mutants of Arabidopsis thaliana with defects in three major wall polysaccharides, pectin ( quasimodo2 ), cellulose ( cellulose synthase3 je5 ), and xyloglucan ( xyloglucan xylosyltransferase1 and 2 ), to probe whether changes in the expression of cell wall‐related genes occur and are similar or different when specific wall components are reduced or missing. Many changes occurred in the transcriptomes of pectin‐ and cellulose‐deficient plants, but fewer changes occurred in the transcriptomes of xyloglucan‐deficient plants. We hypothesize that this might be because pectins interact with other wall components and/or integrity sensors, whereas cellulose forms a major load‐bearing component of the wall; defects in either appear to trigger the expression of structural proteins to maintain wall cohesion in the absence of a major polysaccharide. This core set of genes functioning in CWI in plants represents an attractive target for future genetic engineering of robust and resilient cell walls.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Embracing Anisotropy – Opportunities and Challenges to the Functional Application of Advanced Manufacturing of Energetic Materials

The growing use of additive manufacturing (AM) to manipulate materials, such as metals and plastics, is a result of the desire to realize the potential benefits (i.e., cheaper, faster, and simpler production of complex parts) of the process and the efforts of countless researchers to reduce the method to practice for a broad range of materials. However, in the field of energetic materials (EMs), similar benefits have been broadly claimed, but the transition to practical, industrial applications is still not obvious. The translation of small-scale experimental results to real-world application will have unique challenges, especially due to the nature and requirements of EM functionality. Some of the benefits of AM, such as simpler and faster part creation, are more easily realized. However, attaining the most profound benefits, such as added functionality enabled by spatial gradations of composition or density, will require much more effort from the EMs community to put them into general use.

36 MATERIALS SCIENCE↗
DOE OSTI2023

PTM‐Psi : A python package to facilitate the computational investigation of p ost‐ t ranslational m odification on p rotein s tructures and their i mpacts on dynamics and functions

Abstract Post‐translational modification (PTM) of a protein occurs after it has been synthesized from its genetic template, and involves chemical modifications of the protein's specific amino acid residues. Despite of the central role played by PTM in regulating molecular interactions, particularly those driven by reversible redox reactions, it remains challenging to interpret PTMs in terms of protein dynamics and function because there are numerous combinatorially enormous means for modifying amino acids in response to changes in the protein environment. In this study, we provide a workflow that allows users to interpret how perturbations caused by PTMs affect a protein's properties, dynamics, and interactions with its binding partners based on inferred or experimentally determined protein structure. This Python‐based workflow, called PTM‐Psi , integrates several established open‐source software packages, thereby enabling the user to infer protein structure from sequence, develop force fields for non‐standard amino acids using quantum mechanics, calculate free energy perturbations through molecular dynamics simulations, and score the bound complexes via docking algorithms. Using the S ‐nitrosylation of several cysteines on the GAP2 protein as an example, we demonstrated the utility of PTM‐Psi for interpreting sequence–structure–function relationships derived from thiol redox proteomics data. We demonstrate that the S ‐nitrosylated cysteine that is exposed to the solvent indirectly affects the catalytic reaction of another buried cysteine over a distance in GAP2 protein through the movement of the two ligands. Our workflow tracks the PTMs on residues that are responsive to changes in the redox environment and lays the foundation for the automation of molecular and systems biology modeling.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Multi-Functional Applications of H-Glass Embedded with Stable Plasmonic Gold Nanoislands

Metal nanoparticles (MNPs) are synthesized using various techniques on diverse substrates that significantly impact their properties. However, among the substrate materials investigated, the major challenge is the stability of MNPs due to their poor adhesion to the substrate. Herein, it is demonstrated how a newly developed H-glass can concurrently stabilize plasmonic gold nanoislands (GNIs) and offer multifunctional applications. The GNIs on the H-glass are synthesized using a simple yet, robust thermal dewetting process. The H-glass embedded with GNIs demonstrates versatility in its applications, such as i) acting as a room temperature chemiresistive gas sensor (70% response for NO 2 gas); ii) serving as substrates for surface-enhanced Raman spectroscopy for the identifications of Nile blue (dye) and picric acid (explosive) analytes down to nanomolar concentrations with enhancement factors of 4.8 × 10 6 and 6.1 × 10 5 , respectively; and iii) functioning as a nonlinear optical saturable absorber with a saturation intensity of 18.36 × 10 15 W m -2 at 600 nm, and the performance characteristics are on par with those of materials reported in the existing literature. In conclusion, this work establishes a facile strategy to develop advanced materials by depositing metal nanoislands on glass for various functional applications.

36 MATERIALS SCIENCE↗
DOE OSTI2021

Functional prescription for EFT matching

We simplify the one-loop functional matching formalism to develop a streamlined prescription. The functional approach is conceptually appealing: all calculations are performed within the UV theory at the matching scale, and no prior determination of an Effective Field Theory (EFT) operator basis is required. Our prescription accommodates any relativistic UV theory that contains generic interactions (including derivative couplings) among scalar, fermion, and vector fields. As an example application, we match the singlet scalar extended Standard Model (SM) onto SMEFT.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2020

Three-loop soft function for heavy-to-light quark decays

We compute the 1-jettiness soft function for the decay of a heavy quark into a light quark jet plus colorless particles at three-loop order in soft-collinear effective theory. The 1-jettiness measurement fixes the total small light-cone momentum component of the soft radiation with respect to the jet direction. This soft function is a universal ingredient to the factorization of heavy-to-light quark decays in the limit of small 1-jettiness. Our three-loop result is required for resummation at the N 3 LL' level, e.g. near the endpoint in the photon energy spectrum of the B → X s γ decay. It is also a necessary ingredient for future calculations of fully-differential heavy-to-light quark decay rates at N 3 LO using the N -jettiness subtraction method, e.g. for semileptonic top decays. Using our result for the soft anomalous dimension we confirm predictions on the universal infrared structure of QCD scattering amplitudes with a massive external quark at three loops.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2026

Heavy-quark contributions to the DIS structure functions F 4 and F 5 at NLO in the ACOT scheme

We compute the contributions of heavy quarks to the deep-inelastic scattering structure functions F 4 and F 5 at next-to-leading order of perturbative QCD in the ACOT scheme. Both analytic results including the details of the calculation as well as numerical results for the neutral and charged current cases are presented. Our study thus lays the groundwork for future measurements of these two structure functions in experiments such as the SHiP experiment.

deep inelastic scattering↗
DOE OSTI2020

Functional methods for Heavy Quark Effective Theory

We use functional methods to compute one-loop effects in Heavy Quark Effective Theory. The covariant derivative expansion technique facilitates the efficient extraction of matching coefficients and renormalization group evolution equations. This paper pro- vides the first demonstration that such calculations can be performed through the algebraic evaluation of the path integral for the class of effective field theories that are (i) constructed using a non-trivial one-to-many mode decomposition of the UV theory, and (ii) valid for non-relativistic kinematics. We discuss the interplay between operators that appear at intermediate steps and the constraints imposed by the residual Lorentz symmetry that is encoded as reparameterization invariance within the effective description. The tools presented here provide a systematic approach for computing corrections to higher order in the heavy mass expansion; precision applications include predictions for experimental data and connections to theoretical tests via lattice QCD. A set of pedagogical appendices comprehensively reviews modern approaches to performing functional calculations algebraically, and derives contributions from a term with open covariant derivatives for the first time.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2023

The graviton four-point function in de Sitter space

We compute the tree-level late-time graviton four-point correlation function, and the related quartic wavefunction coefficient, for Einstein gravity in de Sitter spacetime. We derive this result in several ways: by direct calculation, using the in-in formalism and the wavefunction of the universe; by a heuristic derivation leveraging the flat space wave-function coefficient; and by using the boostless cosmological bootstrap, in particular the combination of the cosmological optical theorem, the amplitude limit, and the manifestly local test. We find agreement among the different methods.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2024

NS5-brane backgrounds and coset CFT partition functions

Worldsheet string theory is solvable for a variety of backgrounds involving Neveu-Schwarz fivebranes, in terms of gauged nonlinear sigma models on group manifolds. We compute the worldsheet torus partition function of these models, and propose gauging of null isometries as a unifying principle and conceptual framework for this large family of string backgrounds. In the process, we explain how partition functions of asymmetrically gauged Wess-Zumino-Witten models can be computed from the path integral, and organize and systematize various results scattered throughout the literature.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2022

Sphere and disk partition functions in Liouville and in matrix integrals

We compute the sphere and disk partition functions in semiclassical Liouville and analogous quantities in double-scaled matrix integrals. The quantity sphere/disk2 is unambiguous and we find a precise numerical match between the Liouville answer and the matrix integral answer. An application is to show that the sphere partition function in JT gravity is infinite.

2D Gravity↗
DOE OSTI2025

The boundary entropy function for interface conformal field theories

In 1+1 dimensional conformal field theory with a boundary the boundary contribution to the entanglement entropy is determined by a single number g effectively counting the boundary degrees of freedom. In contrast, in 1+1 dimensional interface CFTs the corresponding quantity is a non-trivial function depending on the position of the interval relative to the interface, giving access to much more detailed information about the defect. In this work we determined this g -function in several examples using holography and derive some of its basic properties from holography and strong subadditivity.

AdS-CFT correspondence↗
DOE OSTI2021

The disk partition function in string theory

We investigate the disk partition function for the open string. This is a subtle problem because of the presence of a residual gauge group PSL(2, R) on the worldsheet even after fixing the conformal gauge. It naively has infinite volume and leads to a vanishing answer. We use different methods that all demonstrate that PSL(2, R) effectively behaves like a group with finite negative volume in the path integral, which leads to a simple prescription for the computation of the disk partition function. We apply our findings to give a simple rederivation of the D-brane tensions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2023

c -functions in higher-derivative flows across dimensions

In the context of gravitational theories describing renormalization group flows across dimensions via AdS/CFT, we study the role of higher-derivative corrections to Einstein gravity. We use the Null Energy Condition to derive monotonicity properties of candidate holographic central charges formed by combinations of metric functions. We also implement an entropic approach to the characterization of the four-derivative flows using the Jacobson-Myers functional and demonstrate, under reasonable conditions, monotonicity of certain terms in the entanglement entropy via the appropriate generalization of the Ryu-Takayanagi prescription. In particular, we show that any flow from a higher dimensional theory to a holographic CFT 2 satisfies a type of monotonicity. We also uncover direct relations between NEC-motivated and entropic central charges.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗