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At least 1,333 records · Page 74

Graphics Processing Unit Assisted Thermographic Compositing

Objective: To develop a software application utilizing general purpose graphics processing units (GPUs) for the analysis of large sets of thermographic data. Background: Over the past few years, an increasing effort among scientists and engineers to utilize the GPU in a more general purpose fashion is allowing for supercomputer level results at individual workstations. As data sets grow, the methods to work them grow at an equal, and often greater, pace. Certain common computations can take advantage of the massively parallel and optimized hardware constructs of the GPU to allow for throughput that was previously reserved for compute clusters. These common computations have high degrees of data parallelism, that is, they are the same computation applied to a large set of data where the result does not depend on other data elements. Signal (image) processing is one area were GPUs are being used to greatly increase the performance of certain algorithms and analysis techniques.

Ragasa, Scott↗

Status and Plans for the WCRP/GEWEX Global Precipitation Climatology Project (GPCP)

The Global Precipitation Climatology Project (GPCP) is an international project under the auspices of the World Climate Research Program (WCRP) and GEWEX (Global Water and Energy Experiment). The GPCP group consists of scientists from agencies and universities in various countries that work together to produce a set of global precipitation analyses at time scales of monthly, pentad, and daily. The status of the current products will be briefly summarized, focusing on the monthly analysis. Global and large regional rainfall variations and possible long-term changes are examined using the 27-year (1 979-2005) monthly dataset. In addition to global patterns associated with phenomena such as ENSO, the data set is explored for evidence of long-term change. Although the global change of precipitation in the data set is near zero, the data set does indicate a small upward change in the Tropics (25s-25N) during the period,. especially over ocean. Techniques are derived to isolate and eliminate variations due to ENS0 and major volcanic eruptions and the significance of the linear change is examined. Plans for a GPCP reprocessing for a Version 3 of products, potentially including a fine-time resolution product will be discussed. Current and future links to IPWG will also be addressed.

Adler, Robert F.↗

Status of the geopotential

Satellite laser ranging, satellite altimetry, and improved measurements of surface gravitational anomalies have broadened the data base on intermediate and short wavelength regions of the earth gravity field. The global data set served to develop new geopotential models with a resolution in spherical harmonics out to degree 180. The resolution was made possible using Seasat altimetry data containing 56,761 values of 1 x 1 deg gravity anomalies. Satellite-to-satellite tracking techniques involving the Geos-3 and Apollo spacecraft data for the sea surface temperature have yielded accurate intermediate wavelength gravity variations which correlate well with residual depth anomalies. Oceanic gravity anomalies have been computed directly from satellite altimetry or through statistical estimation using oceanic geoid heights. The data sets for gravimetric geoids have been compared with altimetric surfaces to identify areas which were of interest for geophysical investigation. Future data sets could become available from a proposed satellite-to-satellite Doppler tracking system (Gravsat) launched by NASA.

Lerch, F. J.↗

BOREAS TE-9 NSA Canopy Biochemistry

The BOREAS TE-9 team collected several data sets related to chemical and photosynthetic properties of leaves. This data set contains canopy biochemistry data collected in 1994 in the NSA at the YJP, OJR, OBS, UBS, and OA sites, including biochemistry lignin, nitrogen, cellulose, starch, and fiber concentrations. These data were collected to study the spatial and temporal changes in the canopy biochemistry of boreal forest cover types and how a high-resolution radiative transfer model in the mid-infrared could be applied in an effort to obtain better estimates of canopy biochemical properties using remote sensing. The data are available in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Hall, Forrest G.↗

Sensitivity of June Near-Surface Temperatures and Precipitation in the Eastern United States to Historical Land Cover Changes Since European Settlement

Land cover changes alter the near surface weather and climate. Changes in land surface properties such as albedo, roughness length, stomatal resistance, and leaf area index alter the surface energy balance, leading to differences in near surface temperatures. This study utilized a newly developed land cover data set for the eastern United States to examine the influence of historical land cover change on June temperatures and precipitation. The new data set contains representations of the land cover and associated biophysical parameters for 1650, 1850, 1920, and 1992, capturing the clearing of the forest and the expansion of agriculture over the eastern United States from 1650 to the early twentieth century and the subsequent forest regrowth. The data set also includes the inferred distribution of potentially water-saturated soils at each time slice for use in the sensitivity tests. The Regional Atmospheric Modeling System, equipped with the Land Ecosystem-Atmosphere Feedback (LEAF-2) land surface parameterization, was used to simulate the weather of June 1996 using the 1992, 1920, 1850, and 1650 land cover representations. The results suggest that changes in surface roughness and stomatal resistance have caused present-day maximum and minimum temperatures in the eastern United States to warm by about 0.3 C and 0.4 C, respectively, when compared to values in 1650. In contrast, the maximum temperatures have remained about the same, while the minimums have cooled by about 0.1 C when compared to 1920. Little change in precipitation was found.

Strack, John E.↗

Earthquake slip vectors and estimates of present-day plate motions

Two alternative models for present-day global plate motions are derived from subsets of the NUVEL-1 data in order to investigate the degree to which earthquake slip vectors affect the NUVEL-1 model and to provide estimates of present-day plate velocities that are independent of earthquake slip vectors. The data set used to derive the first model excludes subduction zone slip vectors. The primary purpose of this model is to demonstrate that the 240 subduction zone slip vectors in the NUVEL-1 data set do not greatly affect the plate velocities predicted by NUVEL-1. A data set that excludes all of the 724 earthquake slip vectors used to derive NUVEL-1 is used to derive the second model. This model is suitable as a reference model for kinematic studies that require plate velocity estimates unaffected by earthquake slip vectors. The slip-dependent slip vector bias along transform faults is investigated using the second model, and evidence is sought for biases in slip directions along spreading centers.

Demets, Charles↗

Enabling NLDAS-2 Anomaly Analysis Using Giovanni

A newly implemented feature in Giovanni (GES DISC Interactive Online Visualization and Analysis Interface) allows users to explore and visualize anomaly data from the NLDAS-2 Primary Forcing and Noah model data sets. For a given measurement and location, an anomaly describes how conditions for a particular time period compare to normal conditions, based on long-term averages. Analyzing anomalies is important for monitoring droughts, determining weather trends, and studying land surface processes relevant for meteorology, hydrology, and climate. Using Giovanni to analyze anomalies for NLDAS-2 data allows for these studies to be efficiently conducted for the central North American region. Phase 2 of NLDAS (NLDAS-2) currently runs at an 1/8th degree resolution, in near-real time, with data sets extending back to January 1979. NLDAS-2 provides data for soil moisture, precipitation, temperature, and other hydrology measurements. Hourly, monthly, and 30-year (1980-2009) monthly climatology data are available for several land surface models and forcing data sets. The Giovanni anomaly tool calculates monthly anomalies, for a given user-defined variable, as the difference between the NLDAS-2 monthly climatology data and the monthly data. The resulting anomaly describes how a chosen month compares to the 30-year monthly average. The presentation will demonstrate the capabilities and usefulness of Giovanni's anomaly tool, detail the recently added NLDAS-2 variables for which anomalies are available, and show how users can access the data.

drough↗

A Gaussian Process Enhancement to Linear Parameter Varying Models

Simulation and analysis for modern engineering systems now routinely requires the merging of multiple disciplines, physical-domains, time-scales, and data sets — all at ever increasing levels. These capabilities are especially needed in the domain of Advanced Air Mobility, where rapidly emerging vehicle designs are significantly more complex, while having to be both cost-effective and safe. To meet these engineering challenges, machine learning methods are an attractive option for merging models and data across multiple areas while providing uncertainty quantification and maintaining computational efficiency. This paper examines the use of Gaussian process machine learning to generalize and enhance the commonly used class of quasi-Linear Parameter Varying models for fast full-envelope simulation while also supporting control system design and analysis with model uncertainty. Gaussian process machine learning is selected because it: can fuse multiple data sets, enables an easy trade-off between data fitting and smoothing, provides model uncertainty quantification, scales well with increasing complexity, and does not generally require starting from a large training data set. To demonstrate the benefits of the approach, a robust stability analysis with Gaussian process uncertainty is shown for a NASA reference design of an electric quad-rotor air-taxi concept vehicle with motor parameter uncertainty.

Gaussian Process↗

A cross-study analysis of drug response prediction in cancer cell lines

Abstract To enable personalized cancer treatment, machine learning models have been developed to predict drug response as a function of tumor and drug features. However, most algorithm development efforts have relied on cross-validation within a single study to assess model accuracy. While an essential first step, cross-validation within a biological data set typically provides an overly optimistic estimate of the prediction performance on independent test sets. To provide a more rigorous assessment of model generalizability between different studies, we use machine learning to analyze five publicly available cell line-based data sets: National Cancer Institute 60, ancer Therapeutics Response Portal (CTRP), Genomics of Drug Sensitivity in Cancer, Cancer Cell Line Encyclopedia and Genentech Cell Line Screening Initiative (gCSI). Based on observed experimental variability across studies, we explore estimates of prediction upper bounds. We report performance results of a variety of machine learning models, with a multitasking deep neural network achieving the best cross-study generalizability. By multiple measures, models trained on CTRP yield the most accurate predictions on the remaining testing data, and gCSI is the most predictable among the cell line data sets included in this study. With these experiments and further simulations on partial data, two lessons emerge: (1) differences in viability assays can limit model generalizability across studies and (2) drug diversity, more than tumor diversity, is crucial for raising model generalizability in preclinical screening.

59 BASIC BIOLOGICAL SCIENCES↗

A geologic atlas of TIMS data

In the three years since the first data were taken, it was well demonstrated that the Thermal Infrared Multispectral Scanner (TIMS), properly used, can be a most valuable tool for the geologist. Compilation of the TIMS data into a geological atlas was felt to be useful. Several data sets were extensively studied to establish TIMS as a geologic tool and to explore the optimum enhancement techniques. It was found that a decorrelation stretch of bands 1, 3, and 5 enhance the data to a form that is very useful and this enhancement will be used in the geologic atlas along with an accompanying geologic map and description. Many data sets are well published and familiar to TIMS users, but there are some sets that, for lack of time and funds, were not thoroughly studied or published. A short description of these least studied sets of data is presented. The images presented along with the many previously studied and published TIMS images constitute an enormously useful set of information for the geologist in the 8 to 10 micron range.

Abbott, Elsa↗

Introduction and data summary, chapter 5

A subset of data representing most of the participating model groups was discussed and reviewed. The results are presented for intercomparisons of that subset of data. Subsequent to the workshop, the various modeling groups had the opportunity to either update or add to the data sets discussed at the workshop. The overall revised data sets as of December 1988 are presented. Data from all the models (where available) are grouped according to: (1) photochemistry and radiation (photodissociation coefficients, and ultraviolet heating and infrared cooling); (2) transport (net radiative heating, tropospheric source tracer experiment, time-dependent source conserved tracer experiment, stratospheric source tracer experiment, and O3 column); (3) current atmosphere (integrated columns of trace gases, Cl(y) and NO(y), nitrogen gases, chlorine gases, O(x) and HO(x) gases, and source gases); and (4) perturbed circulations and temperatures. The data presented provide a detailed summary of the two-dimensional picture of the atmosphere as seen by current atmospheric models.

Source record↗

The Precipitation Characteristics of ISCCP Tropical Weather States

We examine the daytime precipitation characteristics of the International Satellite Cloud Climatology Project (ISCCP) weather states in the extended tropics (35 deg S to 35 deg N) for a 10-year period. Our main precipitation data set is the TRMM Multisatellite Precipitation Analysis 3B42 data set, but Global Precipitation Climatology Project daily data are also used for comparison. We find that the most convective weather state (WS1), despite an occurrence frequency below 10%, is the most dominant state with regard to surface precipitation, producing both the largest mean precipitation rates when present and the largest percent contribution to the total precipitation of the tropical zone of our study; yet, even this weather state appears to not precipitate about half the time. WS1 exhibits a modest annual cycle of domain-average precipitation rate, but notable seasonal shifts in its geographic distribution. The precipitation rates of the other weather states tend to be stronger when occurring before or after WS1. The relative contribution of the various weather states to total precipitation is different between ocean and land, with WS1 producing more intense precipitation on average over ocean than land. The results of this study, in addition to advancing our understanding of the current state of tropical precipitation, can serve as a higher order diagnostic test on whether it is distributed realistically among different weather states in atmospheric models.

Lee, Dongmin↗

Evaluation of SLAR and thematic mapper MSS data for forest cover mapping using computer-aided analysis techniques

Training and test data sets for CAM1S from NS-001 MSS data for two dates (geometrically adjusted to 30 meter resolution) were used to evaluate wavelength band. Two sets of tapes containing digitized HH and HV polarization data were obtained. Because the SAR data on the 9 track tapes contained no meaningful data, the 7 track tapes were copied onto 9 track tapes at LARS. The LARSYS programs were modified and a program was written to reformat the digitized SAR data into a LARSYS format. The radar imagery is being qualitatively interpreted. Results are to be used to identify possible cover types, to produce a classification map to aid in the numerical evaluation classification of radar data, and to develop an interpretation key for radar imagery. The four spatial resolution data sets were analyzed. A program was developed to reduce the spatial distortions resulting from variable viewing distance, and geometrically adjusted data sets were generated. A flowchart of steps taken to geometrically adjust a data set from the NS-001 scanner is presented.

Hoffer, R. M.↗

Prediction of Distributed River Sediment Respiration Rates Using Community-Generated Data and Machine Learning

River sediment microbial respiration is a key indicator of ecosystem functioning and the biogeochemical fluxes across this critical zone link surface and subsurface waters. As such, there is tremendous interest in measuring and mapping these respiration rates. Respiration observations are expensive and labor intensive; there is limited data available to the community. An open science, collaborative initiative is collecting samples for respiration rate analysis and multi-scale metadata; this evolving data set is being used for making machine learning (ML) predictions at unsampled sites to help inform continued community engagement. However, it is a challenge to find an optimum configuration for ML models to work with this feature-rich (i.e., 100+ possible input variables) data set. Here, we present results from a two-tiered approach to managing the analysis of this complex data set: (a) a stacked ensemble of models that automatically optimizes hyperparameters and manages the training of many models and (b) feature permutation importance to detect the most important features in the models. The major elements of this workflow are modular, portable, open, and cloud-based thus making this implementation a potential template for other applications. The models developed here predict that sediment organic matter chemistry is one of the most important features for predicting sediment respiration rate. Other larger-scale, important features fall into the categories of climatic, ecological, geological, and fluvial settings. Leveraging these larger-scale features to generate data-driven estimates of river sediment respiration rates reveals spatially consistent but heterogeneous patterns across the river network of the Columbia River Basin.

54 ENVIRONMENTAL SCIENCES↗

Satellite Instrument Calibration for Measuring Global Climate Change. Report of a Workshop at the University of Maryland Inn and Conference Center, College Park, MD. , November 12-14, 2002

Measuring the small changes associated with long-term global climate change from space is a daunting task. To address these problems and recommend directions for improvements in satellite instrument calibration some 75 scientists, including researchers who develop and analyze long-term data sets from satellites, experts in the field of satellite instrument calibration, and physicists working on state of the art calibration sources and standards met November 12 - 14, 2002 and discussed the issues. The workshop defined the absolute accuracies and long-term stabilities of global climate data sets that are needed to detect expected trends, translated these data set accuracies and stabilities to required satellite instrument accuracies and stabilities, and evaluated the ability of current observing systems to meet these requirements. The workshop's recommendations include a set of basic axioms or overarching principles that must guide high quality climate observations in general, and a roadmap for improving satellite instrument characterization, calibration, inter-calibration, and associated activities to meet the challenge of measuring global climate change. It is also recommended that a follow-up workshop be conducted to discuss implementation of the roadmap developed at this workshop.

NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY (NI↗

Seasonal Characteristics of the Perennial Ice Cover of the Beaufort Sea

By definition, ice which survives the summer is classified as multiyear ice. Thus the area covered by multiyear ice during the winter should be nearly equivalent to the ice area during the previous summer's minima. This condition provides a reasonable criterion for the evaluation of ice concentration and ice type retrieval algorithms using remote-sensing data sets. From special sensor microwave imager (SSM/I) data the NASA Team algorithm estimates the multiyear, first-year, and total ice concentrations during the winter using combinations of the polarization and spectral gradient ratios. The Team algorithm provides only estimates of ice concentration in the summer. From ERS 1 synthetic aperture radar (SAR) data the remarkably stable contrast between multiyear ice and first-year ice in winter provides consistent estimates of multiyear ice concentrations. In the summer, multiyear ice concentration cannot be estimated from SAR or SSM/I data because free water on the surface effectively masks the backscatter and emissivity signature of this ice type. From SAR data a technique which takes advantage of the high backscatter of wind-roughened open water as a discrimination feature is used to estimate the total ice concentration in the summer. With a year-long (January 1992 to January 1993) data set from the Beaufort Sea we found that the multiyear ice concentration estimates from the SAR data are stable and are nearly equivalent to the ice concentration estimated at the end of the previous summer. We contrast this with the variability of the multiyear ice concentration and ice friction estimates obtained using SSM/I data. The Team algorithm produces ice concentration and multiyear ice estimates which are consistently lower than those from the SAR data. We discuss reasons for these discrepancies and the implications of the higher than previously noted multiyear ice concentrations.

Kwok, R.↗

Machine-learning-informed scattering correlation analysis of sheared colloids

We have carried out theoretical analysis, Monte Carlo simulations and machine-learning analysis to quantify microscopic rearrangements of dilute dispersions of spherical colloidal particles from coherent scattering intensity. Both monodisperse and polydisperse dispersions of colloids were created and underwent a rearrangement consisting of an affine simple shear and non-affine rearrangement using the Monte Carlo method. We calculated the coherent scattering intensity of the dispersions and the correlation function of intensity before and after the rearrangement and generated a large data set of angular correlation functions for varying system parameters, including number density, polydispersity, shear strain and non-affine rearrangement. Singular value decomposition of the data set shows the feasibility of machine-learning inversion from the correlation function for the polydispersity, shear strain and non-affine rearrangement using only three parameters. A Gaussian process regressor is then trained on the data set and can retrieve the affine shear strain, non-affine rearrangement and polydispersity with relative errors of 3%, 1% and 6%, respectively. Altogether, our model provides a framework for quantitative studies of both steady and non-steady microscopic dynamics of colloidal dispersions using coherent scattering methods.

Gaussian process regression↗

Evaluation of SLAR and thematic mapper MSS data for forest cover mapping using computer-aided analysis techniques

Several possibilities were considered for defining the data set in which the same test areas could be used for each of the four different spatial resolutions being evaluated. The LARSYS CLUSTER was used to sort the vectors into spectral classes to reduce the within-spectral class variability in an effort to develop training statistics. A data quality test was written to determine the basic signal to noise characteristics within the data set being used. Because preliminary analysis of the LANDSAT MSS data revealed the presence of high cirrus clouds, other data sets are being sought.

Hoffer, R. M.↗