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At least 1,315 records · Page 73

Characterizing the contribution of bioaerosols diversity from complex aerosol particle samples.

Current global change scenarios expect to significantly increase the contribution of pollen to the total organic aerosol budget. In addition, pollen can burst into smaller fragments that are highly efficient as cloud condensation nuclei. However, current climate models still do not incorporate the effects of these particles due to detection and quantification challenges in complex aerosol mixtures. Chemical biomarkers (i.e. fructose) have commonly been used to trace pollen but this approximation can generate false positive results given the large number of shared compounds between different bioaerosols. A previous pilot EMSL experiment performed on pure pollen samples suggested that using a set of metabolites as a fingerprint of bioaerosols could serve to substantially increase detection accuracy over single biomarker approaches. In this proposal we developed novel bioinformatic strategies to characterize and quantify complex pollen mixtures present in the atmosphere. For that, we used diverse machine learning algorithms to analyze metabolic fingerprints from complex mixtures of different pollen acquired with high-resolution mass spectrometry (Orbitrap Q-Exactive). Our preliminary results demonstrated the potential to accurately discern and identify at specific relative abundances different pollen species in complex mixtures. Our research will lead to a significant advancement in the atmospheric chemistry and provide much needed data to improve the accuracy of climate models.

54 ENVIRONMENTAL SCIENCES↗

Malleable Thermosets (Vitrimers) from CO 2 and Plants

Fiber-reinforced composite materials are increasingly used to replace heavy metal components in transportation applications for lightweighting purposes. Polymer matrix materials used in automotive parts, such as epoxies, nylons, and polypropylenes, are almost all produced from fossil fuels. Higher performance thermoset composites are generally not repairable and lower-cost thermoplastic composites do not have enough performance to replace steel. Vitrimers are a new class of polymer materials with long shelf life, low waste in production, ease of processing, and repairability that have the potential to break through the high-cost thermoset/low-performance thermoplastic barrier to vehicle light-weighting. Vitrimers also exhibit easier chemical recyclability than conventional thermosets with reversible chemical crosslinking that enables reprocessing of scrap from production and end of life components. Vitrimers are a new class of engineered plastics that are weldable, repairable and recyclable like thermoplastics but have high mechanical properties like thermosets. Bio-based vitrimers have only recently been reported in the academic and patent literature. These materials represent an unusual opportunity to meet both VTO light-weighting targets for low-density, high performance materials and BETO sustainability targets for value-added high-volume applications of bio-fuel byproducts. Also, PNNL researchers have previously demonstrated a process to convert CO 2 into potential vitrimer precursors. Washington State University (WSU) success in demonstration of bio-based vitrimers and recent steps toward commercialization of petroleum-based vitrimers support the opportunity for PNNL success in development of sustainable vitrimer materials for recyclable, high-performance fiber-reinforced composites for the transportation sectors.

36 MATERIALS SCIENCE↗

Plant Growth Study: Growth of Three Plant Species in 100-OL-1 Operable Unit Soils

Soil contamination from historical application of lead arsenate pesticides persists in the 100-OL-1 Operable Unit (OU) of the U.S. Department of Energy’s Hanford Site in Benton County, Washington. A remedial investigation used a portable X-ray fluorescence analyzer to estimate and map the concentrations of metals in surface soil in the 133 decision units comprising the OU. There is variability in lead and arsenic concentrations among the non-contiguous decision units, and an incomplete understanding of the ecological and human risks from soil contamination. While general screening criteria for lead are reported in literature, limited information is available on the impacts of heavy metals on site-specific plant and animal life. To address this information gap, a study on plant growth in Hanford soils was conducted using native bluegrass (Poa secunda), invasive cheatgrass (Bromus tectorum), and buttercrunch lettuce (Lactuca sativa). The latter is included because it is a common species used in plant growth studies. Soil samples were collected from a single general location within the 100-OL-1 OU, prepared, and categorized as having low, medium, or high concentrations of lead and arsenic, with the high concentration soil having concentrations of up to 3,400 and 790 mg/kg lead and arsenic, respectively. Additionally, a synthetic soil was prepared and used as a control, in accordance with standard plant growth protocols. Fifty-four seeds of each plant species were planted in each of the four soil types following the procedure outlined by the Washington State Department of Ecology. Germination rates and biomass measurements were recorded for 20 days. Both bluegrass and lettuce germination rates appeared to be reduced at the highest lead and arsenic concentrations (Pb: 3400 mg/kg, As: 790 mg/kg), while cheatgrass germination rates were unaffected. Total biomass for all species appeared to be related to the relative concentrations of lead and arsenic in the soil. Results of this growth study agree reasonably well with previous Hanford Site plant growth studies and provide additional data for assessing ecological risk at the Hanford Site.

54 ENVIRONMENTAL SCIENCES↗

The 38 th Annual Interdisciplinary Plant Group Symposium: Enhancing the Resilience of Plant Systems to Climate Change (Meeting Summary)

The University of Missouri’s Interdisciplinary Plant Group held its 38th annual symposium on May 25–27. In short, it was a resounding success! The air was almost electric because of a confluence of events that were particular to this symposium. Not only was there great enthusiasm from students attending their first ever scientific meeting, but this was coupled with excitement and delight exuded by many of our senior invited speakers, who were attending their first in-person meeting since the Covid pandemic began. After a long planning period, and with the ongoing pandemic injecting uncertainty, it was gratifying to see the symposium unfold with such excitement and engagement among participants. The symposium was organized to address the grand challenge of “Enhancing the Resilience of Plant System to Climate Change”, by bringing together experts at the intersections of multiple disciplines to educate our community on the opportunities to develop innovative mitigation strategies and to adapt plants to climate change.

54 ENVIRONMENTAL SCIENCES↗

Plant Cell Biology International Meeting 2022

There is a strong need to develop the knowledge base that will enable the rational design of improved crop species for sustainable agriculture and biomass production. To attain this goal, researchers must learn how plant cells integrate metabolism and cellular dynamics during growth and in response to environmental challenges. Meeting these goals require data sharing and the development and training of faculty, post-doctoral fellows, graduate and undergraduate students in state-of-the-art quantitative integrative cell biology methods. The inaugural Plant Cell Biology International (PCBI) meeting capitalized on the interaction between two well-established plant cell biology communities across the Atlantic, the Midwest Plant Cell Dynamics (PCD) and the European Network for Plant Endomembrane Research (ENPER) and provided a framework to meet these goals. The conference took place in person successfully during August 1-5th 2022 in Crete, Greece. The conference offered opportunities for undergraduate and graduate students, postdocs, young investigators across the globe to present their results and interact across different disciplines. The conference provided an open and inclusive forum for oral presentations that allowed all labs to share research results. It was attended over 80 % by students, postdocs and young investigators. Workshops on best practices for image acquisition and processing pipelines, publication guidelines by scientific journal editors, professional development and well-being benefited the participants at large. Overall, this was the inaugural joint Plant Cell Biology International conference that for the first time officially brought together plant cell biologists to discuss opportunities and challenges in the field to gain a mechanistic understanding of complex biological processes and advance sustainable agriculture. Due to its success, it was rescheduled for 2025 in Crete, to continue strengthening the plant cell biology community and exchanging knowledge and expertise across the globe.

59 BASIC BIOLOGICAL SCIENCES↗

Forensics, Instruments, Turtles & Hot Sauce: The Role of an Isotope Geochemist at LANL [Slides]

Measurable quantities of U in Turtle and Tortoise scute. Turtle samples from areas of known history of radionuclide releases found to have non-natural U isotope signatures. These signatures match what we know about the release of uranium radionuclides at each site. Able to determine quantifiable changes in the U concentration and isotope composition along individual layers of growth (representing seven years of life). Possible correlations with historical releases of U from Oak Ridge site.

54 ENVIRONMENTAL SCIENCES↗

Worth More Dead than Alive? Quantifying Necromass Persistence for Terrestrial Carbon Storage

The continuous cycle of plant-associated microbial biomass growth, death, and decay provides a consistent supply of necromass-C throughout the rooting zone of the soil profile. These inputs are obviously important for resource allocation and soil quality, but microbial necromass-C may play a critical, but currently unknown, role in mitigating the impacts of climate change through atmospheric decarbonization. Microbial necromass is the largest terrestrial sink of persistent carbon in soils, thus its fate and preservation will have a major impact on global C budgets. Our current understanding of the ecosystem controls on necromass generation, biogeochemical transformation, and stabilization is lacking. The objective of this project is to explore the specific influence of rhizosphere and necromass inputs on soil carbon pools.

54 ENVIRONMENTAL SCIENCES↗

Microbial Competition for Copper: Impacts on Carbon and Nitrogen Cycling

Activities from this DOE sponsored project focused on two general questions: (1) how does competition between microbes for copper affect emissions of greenhouse gasses, especially methane and nitrous oxide? and (2) how does a novel copper-binding compound (methanobactin) made by some methane-oxidizing bacteria bind and reduce metals, as well as what are the regulatory elements involved in controlling methanobactin synthesis? From these efforts, we have conclusively shown that microbial competition for copper does indeed exert significant control on microbial community composition, as well as affects how microbes produce and consume nitrous oxide. We have also developed much better insights into the basis for methanobactin activity, as well as how methanotrophs control its production.

54 ENVIRONMENTAL SCIENCES↗

BTRIC Technical Support for Appalachia: FY 2023 Summary Report on Net Negative Carbon Building Demonstration with AgPod

This study investigates the effects of various concentrations of carbon dioxide (CO 2 ) on the photosynthesis and biomass accumulation of crops growing in an Agricultural Pod (AgPod). The initial test crop was kale. It has been found that increasing the CO 2 concentration in the AgPod promotes higher photosynthetic rates in kale plants up to 1300 ppm (highest CO 2 concentration). An interesting finding was that net photosynthetic rates of kale leaves remain unsaturated until unusually high levels of photosynthetically active radiation (PAR, > 1200 µmolm-2s-1) and CO 2 concentration (> 1100 ppm) are reached. Such high levels of saturating PAR and CO 2 concentration values rarely occur under natural conditions, suggesting a promising potential for carbon capture via enriched greenhouse crop production. This task is one part of an overall plan to incorporate an AgPod to utilize carbon captured from the atmosphere to achieve net negative carbon emissions in a small neighborhood or community.

54 ENVIRONMENTAL SCIENCES↗

Microbial metabolic dependency and its impacts on the soil carbon cycle (Final Technical Report, DE-SC0016364)

The terrestrial biosphere contains a large fraction of global carbon (C) and nearly 70% of the organic C in terrestrial systems is found in soils. Global changes in atmospheric CO 2 , temperature, precipitation, and ecosystem N inputs, will impact primary production and carbon inputs to soils, but it remains difficult to predict soil responses to these environmental conditions. Our ability to predict C-cycle responses to global change remains limited by unexplained variability within the terrestrial C-cycle. Our difficulty in predicting responses of the soil C-cycle to environmental change suggests a need for a greater understanding of the biotic mechanisms that govern soil C-transformations. Changes in microbial community structure and function have been proposed to impact soil processes, but mechanistic connections between microbial activity and C-cycle transformations remain poorly described. We assembled an interdisciplinary team to conduct cross-scale examination of microbial contributions to C-cycle dynamics and C-fate in soils. We investigated microbial contributions to soil C-transformations using a suite of complementary isotopic techniques including DNA-Stable Isotope Probing (DNA-SIP), metagenomic-SIP, metabolomic-SIP, proteomic-SIP, and microspatial analysis of soil organic C. These techniques were deployed in experiments that tested fundamental assumptions that underlie terrestrial C-cycle models. We characterized the functional characteristics of soil microorganisms responsible for major C-transformations in soil, evaluated the metabolic and ecological interactions that underlie soil C-cycle dynamics, and evaluated the degree to which these interactions impact rates of C mineralization and stabilization in soils.

54 ENVIRONMENTAL SCIENCES↗

Using root and soil traits to forecast woody encroachment dynamics in mesic grassland

Grasslands are a widespread and globally important biome providing key ecosystem services including C storage and regulation of the water cycle. Grasslands face multiple threats, including changes in drought intensity and woody encroachment - a process that results in increased woody plant abundance corresponding with decreased herbaceous plant abundance. The combination of reduced soil moisture and shifts in plant dominance from herbaceous to woody are likely to alter C pools in the soil profile. We currently do not have the capacity to predict either the magnitude or rates of change in these C pools. In order to predict changes in grassland vegetation structure and the associated impacts on C cycling requires greater understanding of changes in soil C pools at multiple soil depths, and the responses of these pools to changes in precipitation. To support and perform this parameterization of Land Surface Models, we performed detailed investigations of root (anatomical and physiological) and soil traits (microbial function) at varying soil depths, to capture the belowground impacts of changing dominant plant growth forms (grasses to shrubs) and the impacts of frequent drought.

54 ENVIRONMENTAL SCIENCES↗

Biogeochemical consequences of microbial evolution under drought (Final technical report)

As the climate changes, droughts may become more severe. Scientists are uncertain about how drought will affect the natural world, particularly the bacteria, fungi, and other microbes that live in soils and control the Earth’s flows of carbon and nutrients. Researchers at the University of California, Irvine, and Lawrence Berkeley National Laboratory teamed up to study how microbes at the soil surface change with drought and what that means for the carbon cycle. Since 2007, the researchers have used shelters with retractable roofs to prevent nearly half of normal rainfall from reaching grass and shrub landscapes, and their soil microbiomes, in Southern California.

54 ENVIRONMENTAL SCIENCES↗

Science &Technology Review (October/November 2022)

Livermore researchers seek to understand the disease mechanism of amyotrophic lateral sclerosis (ALS) and, with that knowledge, identify therapies to cure this always-fatal disease. As the article beginning on p. 4 describes, the ALS research effort combines Laboratory core competencies in bioscience, engineering, computational modeling, and data science.

36 MATERIALS SCIENCE↗

Science & Technology Review (January/February 2023)

The vortex on this issue’s cover represents the sense of uncertainty experienced by scientists in the initial stages of exploring a new research path. The article beginning on p. 4 introduces research projects of higher technical risk conducted under Lawrence Livermore’s Disruptive Research (DR) Program, a component of the Laboratory Directed Research and Development Program. If successful, DR projects yield order-of-magnitude rewards. If DR projects fail to meet stated goals, they offer different rewards by shaping future research and investment

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Tailored Bioblendstocks with Low Environmental Impact to Optimize MCCI Engines (Final Technical Report)

The overall objective of the project is to develop and demonstrate a microalgae bio-blendstock with greater than 60% greenhouse gas reduction potential relative to petroleum diesel, that can reduce sooting propensity, increase cetane number and improve engine thermal efficiency relative to a baseline diesel engine operating on conventional fuel. Overall, the project achieved the proposed objectives including producing the final tangible deliverable. A sample of algal bioblendstock was analyzed by National Renewable Energy Laboratory (NREL) staff and partners at Yale University. In addition, the work outlined in this report provides substantial new knowledge on the subjects of algae cultivation, algae conversion to biocrude, biocrude upgrading and combustion optimization.

09 BIOMASS FUELS↗

Evaluation of Foster Dam Juvenile Fish Passage, 2018 (Final Report)

This report presents the results of a fish passage study conducted by the Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers Portland District (USACE) at Foster Dam (herein, Foster) during the spring (March–June) and fall (October–December) of 2018. The goal of this study was to provide biologists, engineers, resource managers, and regional decision-makers with information about passage of juvenile Chinook salmon and juvenile steelhead (or appropriate surrogates) through specific routes at Foster. The results of this study are intended to help facilitate decision-making regarding long-term measures for enhancing salmonid passage at Foster. Radio telemetry (RT) methods were instituted at low winter reservoir forebay elevation (low pool, 613 ft mean sea level (msl); spring 2018 and fall 2018) and high summer reservoir forebay elevation (high pool, 635 ft msl; late spring and early summer 2018) to accomplish the following objectives: I. Estimate the following passage metrics under typical operations (i.e., baseline conditions): a. Overall dam-passage survival and survival specific to each route of dam passage, calculated using two different methods: i. Cormack-Jolly-Seber (CJS) estimate: Probability of survival from dam passage to detection at the Primary Array, 19 river kilometers (rkm) downstream of Foster. ii. Virtual Release/Dead Fish Correction (ViRDCt) estimate: Corrects the bias that occurs from misidentifying fish that did not survive dam-passage as alive at the tailrace Egress Array, allowing an estimate of survival from dam passage to this array, 2.5 rkm downstream of Foster. b. Route distribution (passage proportions by route; also known as “passage efficiencies”). c. Efficiency metrics i. Dam-passage efficiency (DPE), the proportion of total fish passing the dam relative to the number of total fish detected in the near forebay of the dam and therefore available to pass. ii. Fish passage efficiency (FPE), the proportion of fish passing via a non-turbine route, relative to the number of total fish in the near forebay and available to pass. iii. Fish weir efficiency (FWE) and spill bay efficiency (SBE), the proportion of fish passing the weir or spill bays, respectively, relative to the total number of fish passing the dam. d. Reservoir residency time (time elapsed between release into reservoir and dam passage) and travel times through the system. II. Estimate efficiency and effectiveness of the new fish weir, compared to the turbines and the spillway. III. Under alternative operations, compare passage through each route (turbines, weir, spillway) using a block/treatment (on/off) design similar to the 2015 and 2016 studies. IV. Estimate efficiency of the new fish weir operating at a low level of discharge (< 500 cfs) and a high level of discharge (= 500 cfs), as well as dam passage survival at each weir discharge level. V. Evaluate survival and behavior of hatchery summer steelhead to wild surrogate winter steelhead for potential use of summer steelhead as a surrogate species winter steelhead. VI. Evaluate juvenile passage rates in the auxiliary water supply (AWS), forebay water supply (FWS), and hatchery water supply (HWS).

54 ENVIRONMENTAL SCIENCES↗

Water foraging with dynamic roots in E3SM; The role of roots in terrestrial ecosystem memory on intermediate timescales (Final Technical Report)

Terrestrial ecosystems can show sustained responses to stress events that may last for years after the initial perturbation. This phenomenon is referred to as legacy or memory and it emerges from a set of ecosystem processes that are poorly captured by Earth System and Land Surface Models. Consequently, these models struggle to predict the impact that extreme climate events have on surface energy, carbon and hydrological exchange once a stressor such as drought has relaxed or in response to repeated exposure to stress. In this project, we set out to test how the addition of dynamic root profiles in land surface models impact the capacity for Earth System Models, such as the Department of Energy’s E3SM, to capture realistic legacy effects. Observations have shown that vegetation shifts their root profiles during stress events to forage for water and these altered root profiles may take years to relax back to the initial state. We hypothesized that the alteration of the belowground root structures may be a source of terrestrial ecosystem legacy that is missing from models. To test this idea we undertook three core activities. (1) We developed a global-scale analysis of the impact of dynamic roots on ecosystem legacy building from a recently developed dynamic root module. (2) We developed new root dynamics in the DOE’s Energy Land Model (ELM) that allowed not only root profiles to shift their profile but also simultaneously alter carbon allocation to fine root pools. We then tested the impact of these new dynamics with intensive sensitivity analysis at four long-term AmeriFlux sites. (3) We undertook detailed isotopic analysis of tree rings from these AmeriFlux sites to assess ecophysiological and ecohydrological legacy to stress events that can be used to benchmark the sensitivity experiments with ELM. From these core activities, we report the following key findings. Firstly, on a global scale, the addition of dynamic roots led to chronically water-stressed ecosystems recovering faster to climate stress while wetter ecosystem showed enhanced legacy. This is because across ecosystems, stress events were almost universally associated with water shortages that led to the development of deeper root profiles. These deeper root profiles proved beneficial for recovery from drought stress. While the root dynamics did not universally improve the modeled representation of legacy it showed complex transient dynamics that emerge from the addition of dynamic roots. Secondly, the sensitivity analysis illustrated long term shifts in rooting depths away from the prescribed default profile suggesting that initializing of root profiles could benefit from spin-up simulations that converge on locally optimized root profiles. In addition, by enabling dynamic allocation some of the sites predicted unrealistically low allocation to roots (and high allocation to leaves). While these changes did not dramatically alter modeled gross primary productivity, they illustrated that without more sophisticated root processes in models, there is little penalty to dramatically disinvest in roots. Thirdly, the isotopic analysis of tree rings showed highly distinct legacy responses across species and sites. For example, T. canadensis showed reduced transpiration the year after stress events illustrated by sustained elevated $\delta^{18}$O. In contrast, A saccharum displayed elevated $\delta^{13}$C associated with reduced stomatal conductance in response to the previous years’ stress event. These geochemical signatures of legacy were present despite tree growth returning to normal the year after the stress. The results show the importance of species-level dynamics in legacy that are absent in modeling that assumes common traits within plant functional types. In summary, the work here established new avenues to explore root dynamics in models while illustrating how additional root processes are needed before dynamic carbon allocation can be implemented. Lastly, this project provided mentorship to a postdoctoral fellow, training for an early career scientist and multiple undergraduate students recruited from a minority serving institution.

54 ENVIRONMENTAL SCIENCES↗

2023 Project Peer Review Report

The Bioenergy Technologies Office (BETO) within the U.S. Department of Energy’s Office of Energy Efficiency and Renewable Energy supports the research, development, and demonstration (RD&D) of technologies aimed at mobilizing domestic renewable carbon resources for the reduction of greenhouse gas emissions across the U.S. economy. BETO systematically prioritizes RD&D into technology opportunities across a range of emerging scientific breakthroughs and technology readiness levels in the subprogram areas illustrated in Figure 1. This approach supports a diverse portfolio while developing the most promising and widely applicable technologies, testing technologies as integrated processes, and demonstrating integrated processes to support scale-up. These technologies will use a broad variety of renewable carbon resources to produce increasing volumes of biofuels and bioproducts. More information on BETO’s mission, goals, and strategic approaches can be found in the Bioenergy Technologies Office Multi-Year Program Plan. The biennial Peer Review process enables external stakeholders to provide feedback on the responsible use of taxpayer funding and develop recommendations for the most efficient and effective ways to accelerate the development of a bioenergy industry. This report includes the results of the Project Peer Review meeting held on April 3–7, 2023, in Denver, Colorado.

09 BIOMASS FUELS↗