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At least 1,297 records · Page 72

Streaming Data Reorganization at Scale with DeltaFS Indexed Massive Directories

We report complex storage stacks providing data compression, indexing, and analytics help leverage the massive amounts of data generated today to derive insights. It is challenging to perform this computation, however, while fully utilizing the underlying storage media. This is because, while storage servers with large core counts are widely available, single-core performance and memory bandwidth per core grow slower than the core count per die. Computational storage offers a promising solution to this problem by utilizing dedicated compute resources along the storage processing path. We present DeltaFS Indexed Massive Directories (IMDs), a new approach to computational storage. DeltaFS IMDs harvest available (i.e., not dedicated) compute, memory, and network resources on the compute nodes of an application to perform computation on data. We demonstrate the efficiency of DeltaFS IMDs by using them to dynamically reorganize the output of a real-world simulation application across 131,072 CPU cores. DeltaFS IMDs speed up reads by 1,740x while only slightly slowing down the writing of data during simulation I/O for in situ data processing.

97 MATHEMATICS AND COMPUTING↗

WHONDRS laboratory time series moisture manipulative experiment from soil core layers across eastern contiguous US: time series aerobic respiration, geochemistry, and aggregates

This dataset supports a broader study examining the effects of wetting and drying on soil layers across the eastern contiguous United States (CONUS). The dataset provides data generated from a laboratory moisture manipulation experiment. The contents include time series aerobic respiration and moisture; dissolved oxygen; sediment geochemistry data; and field metadata. Samples were collected as part of a collaboration between WHONDRS (Worldwide Hydrobiogeochemistry Observation Network for Dynamic River Systems; https://whondrs.pnnl.gov) and MONet (Molecular Observation Network; https://www.emsl.pnnl.gov/monet). The field samples (soil cores) were labeled as MEL_##_COR and subsequent subsamples begin with MEL_##. Additional subsamples were taken for the laboratory experiment and were labeled as EL_##. The labels from the MEL field samples and the EL subsamples can be mapped directly based on the digits following the prefix and underscore (i.e., EL_01 is a subsample from MEL_01). See the critical details section below for more details on sample naming and experimental design.For details on how to navigate this data package, see this infographic from the River Corridor SFA https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About.In addition to this readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions.This dataset is comprised of (1) a folder containing environmental context photos; (2) file-level metadata; (3) data dictionary; (4) field metadata; (5) readme; (6) international generic sample number (IGSN) mapping file; and (7) a subfolder with soil sample data from field samples and the incubation experiment. The sample data subfolder contains (1) effect size; (2) gravimetric moisture from field samples and incubation experiment; (3) respiration rates, raw dissolved oxygen values, and plots; (4) specific conductance, pH, and temperature from the incubation; (5) soil aggregates; (6) a summary containing median values of each data type for each treatment (wet and dry) in the incubation; (7) a summary containing averages for each data type of each soil layer; and (8) methods codes. All files are .csv, .pdf, .jpeg, or .jpg.

54 ENVIRONMENTAL SCIENCES↗

Magnetic fields and massive star formation

Massive stars (M > 8 M {sub ☉}) typically form in parsec-scale molecular clumps that collapse and fragment, leading to the birth of a cluster of stellar objects. We investigate the role of magnetic fields in this process through dust polarization at 870 μm obtained with the Submillimeter Array (SMA). The SMA observations reveal polarization at scales of ≲0.1 pc. The polarization pattern in these objects ranges from ordered hour-glass configurations to more chaotic distributions. By comparing the SMA data with the single dish data at parsec scales, we found that magnetic fields at dense core scales are either aligned within 40° of or perpendicular to the parsec-scale magnetic fields. This finding indicates that magnetic fields play an important role during the collapse and fragmentation of massive molecular clumps and the formation of dense cores. We further compare magnetic fields in dense cores with the major axis of molecular outflows. Despite a limited number of outflows, we found that the outflow axis appears to be randomly oriented with respect to the magnetic field in the core. This result suggests that at the scale of accretion disks (≲ 10{sup 3} AU), angular momentum and dynamic interactions possibly due to close binary or multiple systems dominate over magnetic fields. With this unprecedentedly large sample of massive clumps, we argue on a statistical basis that magnetic fields play an important role during the formation of dense cores at spatial scales of 0.01-0.1 pc in the context of massive star and cluster star formation.

79 ASTRONOMY AND ASTROPHYSICS↗

Tailoring characteristic thermal stability of Ni-Au binary nanocrystals via structure and composition engineering: theoretical insights into structural evolution and atomic inter-diffusion

We report on the structural evolution and atomic inter-diffusion characteristics of the bimetallic Ni-Au nanocrystals (NCs) by molecular dynamics simulations studies. Our results reveal that the thermal stability dynamics of Ni-Au NCs strongly depends on the atomic configurations. By engineering the structural construction with Ni:Au = 1:1 atomic composition, compared with core-shell Au@Ni and alloy NCs, the melting point of core-shell Ni@Au NCs is significantly enhanced up to 1215 K. Unexpectedly, with atomic ratio of Au:Ni= 1:9, the melting process initiates from the atoms in the shell of Ni@Au and alloy NCs, while starts from the core of Au@Ni NCs. The corresponding features and evolution process of structural motifs, mixing and segregation are illustrated via a series of dynamic simulations videos. Moreover, our results revealed that the face centered cubic phase Au{sub 0.75}Ni{sub 0.25} favorably stabilizes in NCs form but does not exist in the bulk counterpart, which elucidates the anomalies of previously reported experimental results on such bimetallic NCs.

36 MATERIALS SCIENCE↗

Observation of nanoparticle coalescence during core-shell metallic nanowire growth in colloids via nanoscale imaging

The surface morphology and shape of crystalline nanowires significantly influence their functional properties, including phonon transport, electrocatalytic performance, to name but a few. However, the kinetic pathways driving these morphological changes remain underexplored due to challenges in real-space and real-time imaging at single-particle and atomic resolutions. This study investigates the dynamics of shell (Au, Pd, Pt, Fe, Cu, Ni) deposition on AuAg alloy seed nanowires during core-shell formation. By using chiral/non-chiral seed nanowires, advanced imaging techniques, including liquid-phase transmission electron microscopy (LPTEM), cryogenic TEM, and three-dimensional electron tomography, a three-step deposition process is revealed: heterogeneous nucleation, nanoparticle attachment, and coalescence. It is found that colloidal Ostwald ripening, metal reactivity, and deposition amount modulate nanoparticle size and surface roughness, shaping final morphologies. Noble metal nanoparticles (Au, Ag, Pd, Pt) coalesce with seed nanowire along the 〈111〉 direction, distinct from that of other metals. These findings are consistent across different metals, including Ru, Cu, Fe, and Ni, highlighting the hypothesis of these processes in nanowire formation. These findings enhance traditional crystallographic theories and provide a framework for designing nanowire morphology. Additionally, our imaging techniques may be applied to investigate phenomena like electrodeposition, dendrite growth in batteries, and membrane deformation.

Yang, Dahai↗

The effects of temperatures on the pebble flow in a pebble bed high temperature reactor

The core of a pebble bed high temperature reactor (PBHTR) moves during operation, a feature which leads to better fuel economy (online refueling with no burnable poisons) and lower fuel stress. The pebbles are loaded at the top and trickle to the bottom of the core after which the burnup of each is measured. The pebbles that are not fully burned are recirculated through the core until the target burnup is achieved. The flow pattern of the pebbles through the core is of importance for core simulations because it couples the burnup distribution to the core temperature and power profiles, especially in cores with two or more radial burnup 'zones '. The pebble velocity profile is a strong function of the core geometry and the friction between the pebbles and the surrounding structures (other pebbles or graphite reflector blocks). The friction coefficient for graphite in a helium environment is inversely related to the temperature. The Thorium High Temperature Reactor (THTR) operated in Germany between 1983 and 1989. It featured a two-zone core, an inner core (IC) and outer core (OC), with different fuel mixtures loaded in each zone. The rate at which the IC was refueled relative to the OC in THTR was designed to be 0.56. During its operation, however, this ratio was measured to be 0.76, suggesting the pebbles in the inner core traveled faster than expected. It has been postulated that the positive feedback effect between inner core temperature, burnup, and pebble flow was underestimated in THTR. Because of the power shape, the center of the core in a typical cylindrical PBHTR operates at a higher temperature than the region next to the side reflector. The friction between pebbles in the IC is lower than that in the OC, perhaps causing a higher relative flow rate and lower average burnup, which in turn yield a higher local power density. Furthermore, the pebbles in the center region have higher velocities than the pebbles next to the side reflector due to the interaction between the pebbles and the immobile graphite reflector as well as the geometry of the discharge conus near the bottom of the core. In this paper, the coupling between the temperature profile and the pebble flow dynamics was analyzed by using PEBBED/THERMIX and PEBBLES codes by modeling the HTR-10 reactor in China. Two extreme and opposing velocity profiles are used as a starting point for the iterations. The PEBBED/THERMIX code is used to calculate the burnup, power and temperature profiles with one of the velocity profiles as input. The resulting temperature profile is then passed to PEBBLES code to calculate the updated pebble velocity profile taking the new temperature profile into account. If the aforementioned hypothesis is correct, the strong temperature effect upon the friction coefficients would cause the two cases to converge to different final velocity and temperature profiles. The results of this analysis indicates that a single zone pebble bed core is self-stabilizing in terms of the pebble velocity profile and the effect of the temperature profile on the pebble flow is insignificant. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Development of a Multiphase Adjoint Capability in OpenFOAM

Thermal hydraulic predictions of flow regimes within nuclear reactor cores require significant computational resources and accuracy to ensure that the core design does not violate the thermal limits of materials. Multiphase computational fluid dynamics (CFD) has become a valuable computational capability for predicting flow characteristics as they relate to applications such as nuclear reactor safety and mixing phenomena around spacer grids within fuel assemblies. Multiphase CFD requires closure relationships for both the effects of turbulence as well as the transfer of mass, momentum, and energy between phases. Understanding the sensitivity of the parameters used in closure relationships is important for improving accuracy, but performing rigorous sensitivity analysis is computationally expensive. Adjoint mathematics have been utilized for reactor physics and fluid dynamics applications with respect to verification, sensitivity analysis, adaptive mesh refinement, and optimization. The usage of adjoint methods to predict the sensitivities of a variety of closure relationship parameters within a given problem has been shown to return sensitivity responses with significantly fewer computations than normal 'large-scale' methods. As the complexity of multiphase CFD methods increases, the demand for accurate verification tools and improvements in computational efficiency also increases, making the development of adjoint capabilities an attractive option. Closure relationships that describe interphase momentum physics in multiphase CFD modelling rely heavily on prescribed constants determined from experimental data. Due to the computational efficiency of an adjoint approach, the time to derive these closure relationships could be dramatically reduced, and data assimilation techniques could be used to return probability density functions of closure models derived using experimental data. This work develops a multiphase adjoint capability for the Eulerian-Eulerian two field, two phase equations. Specifically, the adjoint capability has been developed for the sub-cooled nucleate boiling solver boilEulerFoam developed by Dr. Nam Dinh of NC State University within the open-source CFD library OpenFOAM.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Patchy Particle Model of the Hierarchical Self-Assembly of π-Conjugated Optoelectronic Peptides

Self-assembling peptides containing aromatic groups are an attractive target for bioelectronic materials design because of their ease of manufacture, biocompatibility, aqueous solubility, and chemical tunability. Microscopic understanding of the properties that control assembly is a prerequisite for rational design. In this work, we study the assembly of a family of DXXX-Π–XXXD oligopeptides possessing a π-conjugated core flanked by Asp-terminated tetrapeptide wings that display pH-triggered assembly into supramolecular aggregates. We develop a coarse-grained patchy particle model to conduct molecular dynamics simulations of the assembly of ten thousand oligopeptides over hundreds of nanometers and hundreds of microseconds. We study the effects of core and side chain interaction strength and side chain steric volume upon the morphology and kinetics of assembly. By characterizing the rate and fractal dimension of hierarchical nanoaggregate growth, we identify parameter regimes that favor rapid assembly of linear aggregates and map these regimes to sequence-defined candidate peptides for experimental synthesis and testing. Here, this work establishes new understanding of assembly on previously unexplored time and length scales and presents an efficient and extensible protocol for computational screening and prediction of promising peptide chemistries to assemble nanostructures with desirable optoelectronic properties.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Correlations for the specific heat capacity of ( U x Pu 1 - x ) 1 - y Gd y O 2 - z derived from molecular dynamics

We report UO 2 is the primary conventional fuel used in most nuclear reactors with Gd 2 O 3 commonly added as a burnable absorber to produce a more level power distribution in the reactor core at the beginning of operation. It can also be mixed with other actinide oxides to produce mixed oxide (MOx) fuel. In this study, molecular dynamics simulations were used to predict the specific heat capacity of Gd-doped PuO 2 , UO 2 and (U, Pu)O 2 MOx accommodating Gd 3+ substituted at cation sites via two charge compensation mechanisms - oxygen vacancy formation and the oxidation of U 4+ to U 5+ . The specific heat capacity values for PuO 2 and UO 2 are in good agreement with other studies showing a distinct peak at high temperatures - above 1800 K. As Gd 3+ is added, the peak height reduces for each composition considered. An analytical fit was applied to the data where Gd 3+ was fully charge compensated by either oxygen vacancies or U 5+ . The expression was then validated by predicting the specific heat capacity for three compositions of (Ux Pu 1-x ) 1-y Gd y O 2-z containing both oxygen vacancies and U 5+ , and compared to molecular dynamics data.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Optimal design at inner core of the shaped pyramidal truss structure

Sandwich material is a type of composite material with lightweight, high strength, good dynamic properties and high bending stiffness-to-weight ratio. This can be found well such structures in the nature (for example, internal structure of bones, plants, etc.). New trend which prefers eco-friendly products and energy efficiency is emerging in industries recently. Demand for materials with high strength and light weight is also increasing. In line with these trends, researches about manufacturing methods of sandwich material have been actively conducted. In this study, a sandwich structure named as “Shaped Pyramidal Truss Structure” is proposed to improve mechanical strength and to apply a manufacturing process suitable for massive production. The new sandwich structure was designed to enhance compressive strength by changing the cross-sectional shape at the central portion of the core. As the next step, optimization of the shape was required. Optimization technique used here was the SZGA(Successive Zooming Genetic Algorithm), which is one of GA(Genetic Algorithm) methods gradually reducing the area of design variable. The objective function was defined as moment of inertia of the cross-sectional shape of the strut. The control points of cubic Bezier curve, which was assumed to be the shape of the cross section, were used as design variables. By using FEM simulation, it was found that the structure exhibited superior mechanical properties compared to the simple design of the prior art.

97 MATHEMATICS AND COMPUTING↗

Electron and muon dynamics in neutron stars beyond chemical equilibrium

A neutron star harbors $\mathcal{O}$(10 56 ) electrons in its core, and almost the same number of muons, with muon decay prohibited by Pauli blocking. However, as macroscopic properties of the star such as its mass, rotational velocity, or magnetic field evolve over time, the equilibrium lepton abundances (dictated by the weak interactions) change as well. Scenarios where this can happen include spin-down, accretion, magnetic field decay, and tidal deformation. Here, we discuss the mechanisms by which a star disrupted in one of these ways re-establishes lepton chemical equilibrium. In most cases, the dominant processes are out-of-equilibrium Urca reactions, the rates of which we compute for the first time. If, however, the equilibrium muon abundance decreases, while the equilibrium electron abundance increases (or decreases less than the equilibrium muon abundance), outward diffusion of muons plays a crucial role as well. This is true in particular for stars older than about 10 4 yrs whose core has cooled to ≲ 20 keV. The muons decay in a region where Pauli blocking is lifted, and we argue that these decays lead to a flux of Script $\mathcal{O}$(10 MeV) neutrinos. Realistically, however, this flux will remain undetectable for the foreseeable future.

79 ASTRONOMY AND ASTROPHYSICS↗

Supertough PLA-Silane Nanohybrids by in Situ Condensation and Grafting

Brittleness is a key barrier for poly(lactic acid) (PLA) toward broader applications. Supertough PLA was achieved by simply mixing a low amount (0.5–1 wt %) of organoalkoxysilane with PLA. Three organosilanes, (3-aminopropyl)triethoxysilane (APTES), 3-(triethoxysilyl)propyl isocyanate (ICPTES), and trimethoxymethylsilane (MTMS), were selected for this study to understand how the functional group on a silane affects the behavior of the PLA-silane hybrids. Remarkable improvements in ultimate tensile strain (up to 12 folds) and tensile toughness (up to 10 folds) were observed in APTES- and ICPTES-modified PLA without any loss in tensile strength and modulus. Glass transition temperatures measured by differential scanning calorimetry (DSC) and dynamic mechanical analysis (DMA) did not show any obvious decrease. We propose that in situ condensation of organosilane and grafting of PLA to form a silica-PLA core–shell nanocomplex may be the reason for the improved mechanical properties. Scanning electron microscopy (SEM) showed evidence of nanofibrils at fractured surfaces. Dynamic light scattering (DLS) indicated nanoparticle formation (bimodal, 50–200 nm and <10 nm) in dilute solution, while transmission electron microscopy (TEM) provided clearer evidence of the nanosized silica formed in situ. Rheological studies also showed increased chain entanglement in the polymer melts, which contributed to 1 order of magnitude higher complex viscosity and storage modulus. The simple PLA toughening strategy and the new mechanism revealed in this study will open a door to novel performance polymer materials and broader use of PLAs.

36 MATERIALS SCIENCE↗

A Heterogeneity-Aware Task Scheduler for Spark

Big data processing systems such as Spark are employed in an increasing number of diverse applications-such as machine learning, graph computation, and scientific computing-each with dynamic and different resource needs. These applications increasingly run on heterogeneous hardware, e.g., with out-of-core accelerators. However, big data platforms do not factor in the multi-dimensional heterogeneity of applications and hardware. This leads to a fundamental mismatch between the application and hardware characteristics, and the resource scheduling adopted in big data platforms. For example, Hadoop and Spark consider only data locality when assigning tasks to nodes, and typically disregard the hardware capabilities and suitability to specific application requirements. In this paper, we present RUPAM, a heterogeneity-aware task scheduling system for big data platforms, which considers both task-level resource characteristics and underlying hardware characteristics, as well as preserves data locality. RUPAM adopts a simple yet effective heuristic to decide the dominant scheduling factor (e.g., CPU, memory, or I/O), given a task in a particular stage. Our experiments show that RUPAM is able to improve the performance of representative applications by up to 62.3% compared to the standard Spark scheduler.

Computer Science↗

V and V of the HTR Code Package (HCP) as a comprehensive HTR steady state and transient safety analysis framework - 18664

The HTR code package (HCP) allows for the simulation of several safety-related aspects of a High Temperature Reactor core in a highly integrated manner. HCP currently couples the thermo-fluid dynamics and time dependent neutronics code MGT, the spectrum code TRISHA, the burn up code TNT, the fuel management code SHUFLE and the fission product release code STACY. During its development, state-of-the-art programming techniques and standards are applied. The cross sections in HCP are generated by a 0D- or 1D solver featuring an innovative approach to treat the double heterogeneity of pebble fuel. Also major improvements have been made to optimize the nuclear data library based on ENDF/B-VII. Two advanced fuel management models are provided by the code module SHUFLE that go far beyond the capabilities of existing system codes like VSOP. The source term analysis code module STACY is coupled to HCP providing release rate calculations with a high spatial resolution making use of the nuclide densities provided by TNT. An outstanding new feature of HCP is the possibility to simulate long-term operation scenarios based on OTTO or MEDUL fuel shuffling schemes as well as selected transients in one integrated code package. Even alternating steady state/transient/steady state simulations are possible. So with HCP different fuel strategies and their influence on various kinds of accidents can be examined with one consistent reactor model. This paper provides an overview of the development status of the HCP and reports about selected benchmark results. It is demonstrated that the new system code HCP is capable to replace existing stand-alone codes like VSOP, TINTE/MGT, FRESCO or PANAMA while introducing new features, which so far to our knowledge were not available in the field of HTR safety research. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Core–Shell Structure and Aggregation Number of Micelles Composed of Amphiphilic Block Copolymers and Amphiphilic Heterografted Polymer Brushes Determined by Small-Angle X-ray Scattering

A large group of functional nanomaterials employed in biomedical applications, including targeted drug delivery, relies on amphiphilic polymers to encapsulate therapeutic payloads via self-assembly processes. Knowledge of the micelle structures will provide critical insights into design of polymeric drug delivery systems. Core–shell micelles composed of linear diblock copolymers poly(ethylene glycol)-b-poly(caprolactone) (PEG-b-PCL), poly(ethylene oxide)-b-poly(lactic acid) (PEG-b-PLA), as well as a heterografted brush consisting of a poly(glycidyl methacrylate) backbone with PEG and PLA branches (PGMA-g-PEG/PLA) were characterized by dynamic light scattering (DLS) and small-angle X-ray scattering (SAXS) measurements to gain structural information regarding the particle morphology, core–shell size, and aggregation number. The structural information at this quasi-equilibrium state can also be used as a reference when studying the kinetics of polymer micellization.

36 MATERIALS SCIENCE↗

Dynamics of interaction between dislocations and point defects in bcc iron

The interaction between dislocations and point defects is crucial for many physical properties and phenomena in materials, such as strengthening mechanisms, dislocation bias and void swelling, creep, and impurity segregation around dislocations. Conventional dislocation-point defect interaction models use approximations based on elasticity theory and/or based on assumptions that transition states energies can be deduced from the binding energies of the defects. In this paper, we present the transport properties of point defects near dislocations based on the actual saddle-point configuration of vacancies and self-interstitial atoms as a function of position with respect to screw and edge dislocations in a model system (bcc iron) using the self-evolving atomistic kinetic Monte Carlo. Here, KMC simulations reveal defect dynamics near dislocations are highly anisotropic and correlated, particularly for dumbbells in the compressive field of the edge dislocation, which could result in zones near dislocation cores where dumbbells are less efficiently absorbed compared with vacancies. This study provides accurate saddle-point configurations and energies required to properly describe the dynamics of point defects around dislocations, allowing fundamental insights on the transport mechanisms which are essential for understanding microstructural evolution and mechanical properties of metallic materials.

36 MATERIALS SCIENCE↗

The return of the merging galaxy subclusters of El Gordo?

Merging galaxy clusters with radio relics provide rare insights to the merger dynamics as the relics are created by the violent merger process. We demonstrate one of the first uses of the properties of the radio relic to reduce the uncertainties of the dynamical variables and determine the three-dimensional (3D) configuration of a cluster merger, ACT-CL J0102-4915, nicknamed El Gordo. From the double radio relic observation and the X-ray observation of a comet-like gas morphology induced by motion of the cool core, it is widely believed that El Gordo is observed shortly after the first core passage of the subclusters. Here, we employ a Monte Carlo simulation to investigate the 3D configuration and dynamics of El Gordo. Using the polarization fraction of the radio relic, we constrain the estimate of the angle between the plane of the sky and the merger axis to be α=21°± $9\atop{11}$. We find the relative 3D merger speed of El Gordo to be 2400 ± $400\atop{200}$ km s -1 at pericentre. The two possible estimates of the time since pericentre (TSP) are 0.46 ± $0.09\atop{0.16}$ and 0.91± $0.22\atop{0.39}$ Gyr for the outgoing and returning scenario, respectively. We put our estimates of the TSP into context by showing that if the time-averaged shock velocity is approximately equal to or smaller than the pericentre velocity of the corresponding subcluster in the centre-of-mass frame, the two subclusters are more likely to be moving towards, rather than away, from each other, post apocentre. Finally, we compare and contrast the merger scenario of El Gordo with that of the Bullet Cluster, and show that this late-stage merging scenario explains why the south-east (SE) dark matter lensing peak of El Gordo is closer to the merger centre than the SE cool core.

79 ASTRONOMY AND ASTROPHYSICS↗