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At least 1,279 records · Page 71

RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D

Abstract Now in its 52nd year of continuous operations, the Protein Data Bank (PDB) is the premiere open‐access global archive housing three‐dimensional (3D) biomolecular structure data. It is jointly managed by the Worldwide Protein Data Bank (wwPDB) partnership. The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is funded by the National Science Foundation, National Institutes of Health, and US Department of Energy and serves as the US data center for the wwPDB. RCSB PDB is also responsible for the security of PDB data in its role as wwPDB‐designated Archive Keeper. Every year, RCSB PDB serves tens of thousands of depositors of 3D macromolecular structure data (coming from macromolecular crystallography, nuclear magnetic resonance spectroscopy, electron microscopy, and micro‐electron diffraction). The RCSB PDB research‐focused web portal ( RCSB.org ) makes PDB data available at no charge and without usage restrictions to many millions of PDB data consumers around the world. The RCSB PDB training, outreach, and education web portal ( PDB101.RCSB.org ) serves nearly 700 K educators, students, and members of the public worldwide. This invited Tools Issue contribution describes how RCSB PDB (i) is organized; (ii) works with wwPDB partners to process new depositions; (iii) serves as the wwPDB‐designated Archive Keeper; (iv) enables exploration and 3D visualization of PDB data via RCSB.org ; and (v) supports training, outreach, and education via PDB101.RCSB.org . New tools and features at RCSB.org are presented using examples drawn from high‐resolution structural studies of proteins relevant to treatment of human cancers by targeting immune checkpoints.

59 BASIC BIOLOGICAL SCIENCES↗

An initial model for estimating soybean development stages from spectral data

A model, utilizing a direct relationship between remotely sensed spectral data and soybean development stage, has been proposed. The model is based upon transforming the spectral data in Landsat bands to greenness values over time and relating the area of this curve to soybean development stage. Soybean development stages were estimated from data acquired in 1978 from research plots at the Purdue University Agronomy Farm as well as Landsat data acquired over sample areas of the U.S. Corn Belt in 1978 and 1979. Analysis of spectral data from research plots revealed that the model works well with reasonable variation in planting date, row spacing, and soil background. The R-squared of calculated U.S. observed development stage exceeded 0.91 for all treatment variables. Using Landsat data the calculated U.S. observed development stage gave an R-squared of 0.89 in 1978 and 0.87 in 1979. No difference in the models performance could be detected between early and late planted fields, small and large fields, or high and low yielding fields.

Henderson, K. E.↗

Some propulsion system noise data handling conventions and computer programs used at the Lewis Research Center

Methods of handling one-third-octave band noise data originating from the outdoor full-scale fan noise facility and the engine acoustic facility at the Lewis Research Center are presented. Procedures for standardizing, retrieving, extrapolating, and reporting these data are explained. Computer programs are given which are used to accomplish these and other noise data analysis tasks. This information is useful as background for interpretation of data from these facilities appearing in NASA reports and can aid data exchange by promoting standardization.

Montegani, F. J.↗

Determination of cloud parameters from infrared sounder data

The World Climate Research Programme (WCRP) plan is concerned with the need to develop a uniform global cloud climatology as part of a broad research program on climate processes. The International Satellite Cloud Climatology Project (ISCCP) has been approved as the first project of the WCRP. The ISCCP has the basic objective to collect and analyze satellite radiance data to infer the global distribution of cloud radiative properties in order to improve the modeling of cloud effects on climate. Research is conducted to explore an algorithm for retrieving cloud properties by utilizing the available infrared sounder data from polar-orbiting satellites. A numerical method is developed for computing cloud top heights, amount, and emissivity on the basis of a parameterized infrared radiative transfer equation for cloudy atmospheres. Theoretical studies were carried out by considering a synthetic atmosphere.

Yeh, H.-Y. M.↗

A Survey of Open-Source Tools for Transmission and Distribution Systems Research

This work presents a review of open-source electric power transmission and distribution systems analysis tools suitable for use by industry professionals and academic researchers. Due to the high complexity of the electric grid, there exist numerous tools and extensive research pertaining to nearly every aspect of the design, operation, and control of transmission and distribution networks. In addition to the commercial tools, a wide range of free, open-source tools, models, and data usable by the scientific community for related research have been developed by different organizations, including both international and US universities and national laboratories. However, due to the absence of a catalog of available tools, models and data, researchers often lack a knowledge of existing capabilities and may develop duplicative software and tools. Increasing awareness of these available resources seeks to accelerate their broader use, leading to more efficient and standardized grid analysis. This review paper (which is part of a larger survey effort that studied over 400 tools in the transmission, distribution, buildings, and electric vehicles space) outlines selected open-source resources that have been developed in power transmission and distribution systems research. It is anticipated that this work can serve as a guide for industry and academic researchers alike, ensuring that research efforts are well-channeled.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Mirador: A Simple, Fast Search Interface for Remote Sensing Data

A major challenge for remote sensing science researchers is searching and acquiring relevant data files for their research projects based on content, space and time constraints. Several structured query (SQ) and hierarchical navigation (HN) search interfaces have been develop ed to satisfy this requirement, yet the dominant search engines in th e general domain are based on free-text search. The Goddard Earth Sci ences Data and Information Services Center has developed a free-text search interface named Mirador that supports space-time queries, inc luding a gazetteer and geophysical event gazetteer. In order to compe nsate for a slightly reduced search precision relative to SQ and HN t echniques, Mirador uses several search optimizations to return result s quickly. The quick response enables a more iterative search strateg y than is available with many SQ and HN techniques.

Lynnes, Christopher↗

Guidelines for Publicly Archiving Terrestrial Model Data to Enhance Usability, Intercomparison, and Synthesis

Scientific communities are increasingly publishing data to evaluate, accredit, and build on published research. However, guidelines for curating data for publication are sparse for model-related research, limiting the usability of archived simulation data. In particular, there are no established guidelines for archiving data related to terrestrial models that simulate land processes and their coupled interactions with climate. Terrestrial modelers have a unique set of challenges when publishing data due to the diversity of scientific domains, research questions, and the types and scales of simulations. Researchers in the U.S. Department of Energy’s (DOE) projects use a variety of multiscale models to advance robust predictions of terrestrial and subsurface ecosystem processes. Here, we synthesize archiving needs for data associated with different DOE models, and provide guidelines for publishing terrestrial model data components following FAIR (Findable, Accessible, Interoperable, Reusable) principles. The guidelines recommend archiving model inputs and testing data used in final simulation runs along with associated codes, workflow scripts, and metadata in public repositories. Researchers should consider archiving model outputs if they are within the storage limits of the repository. We also provide considerations for how to bundle files into different data publications with citable digital object identifiers. Finally, we identify repository features and tools that would enable storage and reuse of model data. Given the diversity of DOE terrestrial models, these guidelines are transferable to other model types and will enable efficient reuse of simulation data for purposes such as model intercomparisons, initialization, benchmarking, synthesis, and comparisons with field observations.

58 GEOSCIENCES↗

Using Federated Learning to Overcome Data Gravity in Space

Humans intend to take longer missions to outer space. Understanding the impact that space has on human health is paramount to the success of these missions. Controlled experiments with model organisms are run to infer the impact of space conditions on human health, but the data these experiments generate are too large to transfer to Earth for building models. The same is true for space-relevant data generated on Earth. Ideally, these datasets should be combined to improve statistical power and model accuracy without having to transfer data. Federated learning is such a method which trains an algorithm across decentralized computing systems, each of which has their own local copy of training and testing data. In this research, made possible by NASA@Work, the AI for Life in Space group at NASA demonstrates the use of federated learning to train an ensemble of causality inference models on a combination of data residing on the International Space Station (ISS) and in the cloud. Our work leverages CRISP, a causal inference platform developed during the 2020 Frontier Development Lab’s “Astronaut Health Challenge.” We also leverage the OpenFL federated learning library which was collaboratively developed at Intel and UPenn. We used publicly available data from the NASA Ames Life Sciences Data Archive to identify features in ionizing radiation experiments as causal of changes in cardiac blood velocity. This research demonstrates, for the first time, the possibility of running machine learning algorithms on datasets separated by astronomical distances. In this experiment, all the data were generated in terra, half of which were transferred to the ISS and analyzed on the Spaceborne Computer. In the future, our research will leverage federated learning on data generated in situ on the ISS with data generated terrestrially to predict the impact of spaceflight on mammalian female reproductive capacity.

James Casaletto↗

CMIP7 Data Request: atmosphere priorities and opportunities

This paper presents a comprehensive overview of the Coupled Model Intercomparison Project Phase 7 (CMIP7) request for data unlocking key research avenues in atmospheric science and provides justification for the resources needed to produce this data. Topics within the CMIP7 Atmosphere Theme centre around processes and feedbacks in atmospheric science such as clouds, aerosols and atmospheric chemistry, atmospheric circulation, temperature variability and extremes, radiative forcings, and Earth system model evaluation. These topics are summarised in this paper as scientific “opportunities” which will be realised through CMIP7 experiments and Earth system model outputs. These opportunities were submitted by a thematic group of atmospheric science community representatives combined with an extended consultation process. The production of these variables will close key gaps and uncertainties identified during previous rounds of CMIP, and will be broadly used by scientific, policy, governmental, industry, and other communities that rely on climate model projections for research and decision making, including supporting the 7th Intergovernmental Panel on Climate Change Assessment Report (AR7). As an author group, we also reflect on the process used to collate this data request and make recommendations to future CMIP governance on implementing a consultation on this scale in the future.

58 GEOSCIENCES↗

Satellite remote sensing for ice sheet research

Potential research applications of satellite data over the terrestrial ice sheets of Greenland and Antarctica are assessed and actions required to ensure acquisition of relevant data and appropriate processing to a form suitable for research purposes are recommended. Relevant data include high-resolution visible and SAR imagery, infrared, passive-microwave and scatterometer measurements, and surface topography information from laser and radar altimeters.

Thomas, R. H.↗

Federated Space-Time Query for Earth Science Data Using OpenSearch Conventions

This slide presentation reviews a Space-time query system that has been developed to assist the user in finding Earth science data that fulfills the researchers needs. It reviews the reasons why finding Earth science data can be so difficult, and explains the workings of the Space-Time Query with OpenSearch and how this system can assist researchers in finding the required data, It also reviews the developments with client server systems.

Lynnes, Chris↗

Small forest cuttings mapped with Landsat digital data

The Cooperative Landsat Applications Research Group used computer classification of Landsat digital data to map forest cuttings (clearcuts) in northern New Hampshire. Cuttings as small as 3 hectares were identified. Several ages or conditions of clearcuts could be distinguished. Progress in two methods of duplicating classification categories from one Landsat pass to another are discussed. One method was used in making maps of areas in 1973, 1975, and 1978.

Bryant, E.↗

Standard Operating Procedure for Optimal Deployment of Meteorological Instrumentation Within the Solar Radiation Research Laboratory (BMS and RMS SOP)

The objective of the National Renewable Energy Laboratory's (NREL's) Solar Radiation Research Laboratory (SRRL) is to collect and use high-quality solar radiation data sets for research leading to the widespread adoption of solar technologies. To appropriately populate and track the diverse array of instruments at the NREL-SRRL, NREL has established a Standard Operating Procedure (SOP) for optimal instrument deployment within the SRRL for both the Baseline Measurement System (BMS) and the Research Measurement System (RMS). Using best practices methodologies, the NREL-SRRL maintains a varied and extensive array of solar monitoring equipment to test, evaluate, and characterize the solar sensors used by federal and international agencies as well as the solar industry to determine the solar resource. The SOP provides the industry with guidance for solar resource assessment and is used for procedures in the long-term continuous monitoring of legacy instruments alongside state-of-the-art instruments. Based on the SOP, instruments are annually evaluated for continued deployment. Instruments that do not meet the SOP criteria are decommissioned, and new instruments that meet the criteria are deployed. Streamlining and optimizing the use of this facility ensures that the lab continues to be a world-leading solar calibration and measurement facility.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Standard Operating Procedure for Optimal Deployment of Meteorological Instrumentation Within the Solar Radiation Research Laboratory: 2024 Edition

The objective of the National Renewable Energy Laboratory's (NREL's) Solar Radiation Research Laboratory (SRRL) is to collect and use high-quality solar radiation data sets for research leading to the widespread adoption of solar technologies. To appropriately populate and track the diverse array of instruments at the NREL-SRRL, NREL has established a Standard Operating Procedure (SOP) for optimal instrument deployment within the SRRL for both the Baseline Measurement System (BMS) and the Research Measurement System (RMS). Using best practices methodologies, the NREL-SRRL maintains a varied and extensive array of solar monitoring equipment to test, evaluate, and characterize the solar sensors used by federal and international agencies as well as the solar industry to determine the solar resource. The SOP provides the industry with guidance for solar resource assessment and is used for procedures in the long-term continuous monitoring of legacy instruments alongside state-of-the-art instruments. Based on the SOP, instruments are annually evaluated for continued deployment. Instruments that do not meet the SOP criteria are decommissioned, and new instruments that meet the criteria are deployed. Streamlining and optimizing the use of this facility ensures that the lab continues to be a world-leading solar calibration and measurement facility. This 2024 edition includes updates to the appendices to reflect the instrument changes from one year to another.

14 SOLAR ENERGY↗

Standard Operating Procedure for Optimal Deployment of Meteorological Instrumentation Within the Solar Radiation Research Laboratory: 2025 Edition

The objective of the National Renewable Energy Laboratory's (NREL's) Solar Radiation Research Laboratory (SRRL) is to collect and use high-quality solar radiation data sets for research leading to the widespread adoption of solar technologies. To appropriately populate and track the diverse array of instruments at the NREL-SRRL, NREL has established a Standard Operating Procedure (SOP) for optimal instrument deployment within the SRRL for both the Baseline Measurement System (BMS) and the Research Measurement System (RMS). Using best practices methodologies, the NREL-SRRL maintains a varied and extensive array of solar monitoring equipment to test, evaluate, and characterize the solar sensors used by federal and international agencies as well as the solar industry to determine the solar resource. The SOP provides the industry with guidance for solar resource assessment and is used for procedures in the long-term continuous monitoring of legacy instruments alongside state-of-the-art instruments. Based on the SOP, instruments are annually evaluated for continued deployment. Instruments that do not meet the SOP criteria are decommissioned, and new instruments that meet the criteria are deployed. Streamlining and optimizing the use of this facility ensures that the lab continues to be a world-leading solar calibration and measurement facility. This 2025 edition includes updates to the appendices to describe the current instrumentation of the NREL-SRRL.

14 SOLAR ENERGY↗

Navigation between the planets

Recent advances in spacecraft tracking, chronometry, ephemerides, and orbit and trajectory determinations are reviewed. Improvements in timekeeping are reviewed, as well as precision distance and range measurements; orbit determinations, trajectory-correction maneuvers, flight path optimization, and information provided by rotation of the tracking station with the earth's surface. Doppler and tropospheric wave propagation effects are dealt with. Nongravitational perturbations (solar radiation pressure, release of gases from the spacecraft, stochastic unmodeled accelerations and sequential estimation to cope with them), the effect of the target planet's gravitational field upon close approach, and navigation problems in the outer reaches of the solar system (TV data telemetered back for inertial navigation) are covered. By-products of the research include: refined data on the mass of planets, on planetary mass distributions, planet configurations, on physical properties of the atmospheres and ionospheres of planets, and opportunities for refined tests of gravitation and relativity theories and models.

Melbourne, W. G.↗

The Critical Need for Continued Data Collection and Development of Future Thermal Satellite Sensors

There is a rich and long history of thermal infrared (TIR) remote sensing data for multidisciplinary Earth science research. The continuity of TIR data collection, however, is now in jeopardy given there are no planned future Earth observing TIR remote sensing satellite systems with moderately high spatial resolutions to replace those currently in orbit on NASA's Terra suite of sensors. This session will convene researchers who have actively worked in the field of TIR remote sensing to present results that elucidate the importance of thermal remote sensing to the wider Earth science research community. Additionally, this session will also exist as a forum for presenting concepts and ideas for new thermal sensing systems with high spatial resolutions for future Earth science satellite missions, as opposed to planned systems such as the Visible/Infrared Imager/Radiometer (VIIRS) suite of sensors on the National Polar-orbiting Operational Environmental Satellite System (NPOESS) that will collect TIR data at very coarse spatial resolutions.

Quattrochi, Dale A.↗

NASA Earth Observation Systems and Applications for Public Health and Air Quality Models and Decisions Support

Health and Air Quality providers and researchers need environmental data to study and understand the geographic, environmental, and meteorological differences in disease. Satellite remote sensing of the environment offers a unique vantage point that can fill in the gaps of environmental, spatial, and temporal data for tracking disease. This presentation will demonstrate the need for collaborations between multi-disciplinary research groups to develop the full potential of utilizing Earth Observations in studying health. Satellite earth observations present a unique vantage point of the earth's environment from space, which offers a wealth of health applications for the imaginative investigator. The presentation is directly related to Earth Observing systems and Global Health Surveillance and will present research results of the remote sensing environmental observations of earth and health applications, which can contribute to the public health and air quality research. As part of NASA approach and methodology they have used Earth Observation Systems and Applications for Public Health and Air Quality Models to provide a method for bridging gaps of environmental, spatial, and temporal data for tracking disease. This presentation will provide an overview of projects dealing with infectious diseases, water borne diseases and air quality and how many environmental variables effect human health. This presentation will provide a venue where the results of both research and practice using satellite earth observations to study weather and it's role in public health research.

Estes, Sue↗