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At least 1,279 records · Page 71

Exploring and Analyzing Climate Variations Online by Using NASA MERRA-2 Data at GES DISC

NASA Giovanni (Goddard Interactive Online Visualization ANd aNalysis Infrastructure) (http:giovanni.sci.gsfc.nasa.govgiovanni) is a web-based data visualization and analysis system developed by the Goddard Earth Sciences Data and Information Services Center (GES DISC). Current data analysis functions include Lat-Lon map, time series, scatter plot, correlation map, difference, cross-section, vertical profile, and animation etc. The system enables basic statistical analysis and comparisons of multiple variables. This web-based tool facilitates data discovery, exploration and analysis of large amount of global and regional remote sensing and model data sets from a number of NASA data centers. Long term global assimilated atmospheric, land, and ocean data have been integrated into the system that enables quick exploration and analysis of climate data without downloading, preprocessing, and learning data. Example data include climate reanalysis data from NASA Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2) which provides data beginning in 1980 to present; land data from NASA Global Land Data Assimilation System (GLDAS), which assimilates data from 1948 to 2012; as well as ocean biological data from NASA Ocean Biogeochemical Model (NOBM), which provides data from 1998 to 2012. This presentation, using surface air temperature, precipitation, ozone, and aerosol, etc. from MERRA-2, demonstrates climate variation analysis with Giovanni at selected regions.

knowledge base↗

Astro-H Data Analysis, Processing and Archive

Astro-H (Hitomi) is an X-ray Gamma-ray mission led by Japan with international participation, launched on February 17, 2016. The payload consists of four different instruments (SXS, SXI, HXI and SGD) that operate simultaneously to cover the energy range from 0.3 keV up to 600 keV. This paper presents the analysis software and the data processing pipeline created to calibrate and analyze the Hitomi science data along with the plan for the archive and user support.These activities have been a collaborative effort shared between scientists and software engineers working in several institutes in Japan and USA.

Archive↗

Astro-H/Hitomi Data Analysis, Processing, and Archive

Astro-H is the x-ray/gamma-ray mission led by Japan with international participation, launched on February 17, 2016. Soon after launch, Astro-H was renamed Hitomi. The payload consists of four different instruments (SXS, SXI, HXI, and SGD) that operate simultaneously to cover the energy range from 0.3 keV up to 600 keV. On March 27, 2016, JAXA lost contact with the satellite and, on April 28, they announced the cessation of the efforts to restore mission operations. Hitomi collected about one months worth of data with its instruments. This paper presents the analysis software and the data processing pipeline created to calibrate and analyze the Hitomi science data, along with the plan for the archive. These activities have been a collaborative effort shared between scientists and software engineers working in several institutes in Japan and United States.

Angelini, Lorella↗

Simplifying Satellite and Ground Data Validation with Level-2 Subsetting

We demonstrate that scientists can simplify their satellite data validation workflow with the use of NASA Godddard Earth Sciences Data and Information Services Center (GES DISC) subsetting services. We perform a sample validation of Aura ozone products collocated with ground-based ozone measurements using subsetting services to trim satellite data to only the relevant user-defined variables and spatio-temporal region. Because the subsetting service automatically returns only relevant data granules that adhere to a set of user-defined coincidence criteria, user workload is greatly reduced. Moreover, the resultant data files are substantially smaller than full data granules due to the subsetting service further culling the data to the relevant geospatio-temporal coincidence criteria, user-defined variables, and user-defined dimensions of variables. This decreases data download throughput and file storage requirements. The validation presented here quantifies the time and file size savings that can be achieved by utilizing subsetting services within the satellite data validation workflow.

Johnson, James↗

Arm DevSummit Keynote: Environment for Data Engineering in Virtual Reality: Ethical Considerations

Currently, the US Government is going through a large-scale data Transformation effort, where the GSA playbook is guiding all agencies to make their processes data-driven with the help of emerging technologies. To address concerns about algorithm sharing, AI adoption, and vendor lock-in, the NASA Langley Research Center Digital Transformation Group has developed the Environment for Data Engineering in Virtual Reality (EnDEVR), a data science ecosystem that allows users to command and investigate customizable data analyses from a VR environment. The system has been evaluated in the Oculus Rift S and Quest environments, two popular VR systems powered by the ARM architecture. Current and future development will employ several AI capabilities to guide research and automation within the environment and to facilitate algorithm sharing. In this talk, we will discuss the results of an initial ethical investigation and recommended considerations for the use of AI within the system.

Artificial Intelligence↗

pyQuARC: Open Source Library for Earth Observation Metadata Quality Assessment

Metadata quality is essential to effective data discovery and has become increasingly vital as more Earth Science data sets become available. The Common Metadata Repository (CMR) hosts metadata describing NASA’s Earth Observation data products, which are archived across 12 Distributed Active Archive Centers (DAACs). The Analysis and Review of CMR (ARC) Team, located at Marshall Space Flight Center, conducts metadata quality assessments to ensure that these data products are discoverable, accessible, and usable. To achieve these goals, the ARC team has developed a metadata quality assessment framework to evaluate metadata completeness, correctness, and consistency. ARC uses a combination of manual and automated methods to assess these three components and identify areas of improvement; the team then collaborates with the DAACs to resolve any findings. To streamline this process, ARC is currently developing a host of scripts, known as pyQuARC, to automate metadata quality assessments as much as possible. pyQuARC is an open source library for Earth Observation Metadata Quality Assessment, and the tool utilizes ARC’s metadata quality assessment framework to make basic validation checks, pinpoint inconsistencies between dataset-level (i.e. collection) and file-level (i.e. granule) metadata, and identify opportunities for more descriptive and robust information. Since pyQuARC is also customizable, other users can make modifications as needed, and future metadata standards can also be implemented. Once pyQuARC is fully developed, it will support multiple schema types to serve the broader EOSDIS metadata community. This presentation will provide an overview of pyQuARC and its process of development while showcasing the tool’s valuable features and uses.

Jenny Wood↗

Squeezing Every Last 'Bit' of Information from Enceladus Mass Spectrometry

Potential opportunities to return to Enceladus in Discovery and Flagship class missions inspire development of next-generation instruments and creative approaches to sample collection, sample analysis, and data analysis and transmission strategies. Mass spectrometers (MS) are ideally suited to future Enceladus missions due to their analytical power in identifying a range of molecular and ionic compositions – including complex organics – and potentially astrobiologically-important features such as isotope ratios, chirality, and enantiomeric excess. However, long communication delays from Enceladus and limited bandwidth limits the data transmission from these higher-data-volume instruments, likely delaying mission-related response to new data. We explore the utility of data science and machine learning (ML) on isotope ratio (IR)MS data collected from laboratory analogs of Enceladus to: 1) process data quickly for rapid ground-based analyses, 2) understand if compositional and biosignature information could be extracted from IRMS data, and 3) evaluate whether onboard ML techniques could improve sample analysis, cadence, and transmission prioritization. Laboratory analogs analyzed isotopes of volatile CO2 that interacted with seawaters of varying composition, and include both abiotic and biotic (microbially-influenced) experiments. Enceladus’s alkaline oceans promote speciation of carbon into multiple forms (e.g., H2CO3 / CO2, HCO3-, and CO32-), each of which could be isotopically fractionated by abiotic or biotic reactions. Large (>2‰) changes in carbon isotopes (δ13C) are observed from some biotic experiments inoculated with complex microbial ecosystems relative to the abiotic seawaters. ML training and classification suggests that microbial samples can be distinguished from abiotic samples, yet that a broad range of microbial experiments are necessary to train ML models to cover a range of complexities including disequilibria, and isotopic and compositional fractionation.

geochemistry↗

Optimizing a Small RNAseq Analysis Pipeline for NASA GeneLab Using Open-Source Tools and Libraries

Small RNA sequencing (small RNAseq) is a powerful tool for studying the regulation of gene expression in various organisms. Small RNAseq has been leveraged in space biology research to study how expression of small RNAs, e.g. micro RNAs (miRNAs), small interfering RNAs (siRNAs), and piwi-interacting RNAs (piRNAs), change upon exposure to the space environment. NASA GeneLab currently hosts small RNAseq raw data derived from space-relevant experiments on the Open Science Data Repository (OSDR). To maximize the accessibility of these data to the scientific community, in addition to hosting raw data, which is only interpretable by bioinformaticians, GeneLab plans to process all small RNAseq datasets and make those processed data available to the scientific community via the OSDR. In this study, we present the development of the GeneLab standardized pipeline for processing small RNAseq datasets. Using human, plant, and synthetic small RNAseq datasets, we interrogate various open-source software and publicly available databases to evaluate their accuracy and reproducibility in each step of the pipeline. For quality control and adapter detection and trimming, we evaluated TrimGalore!, FASTX, SeqKit, and DNApi methods to optimize alignment to reference genomes. We compared BWA, Bowtie, and Bowtie2 to determine the optimal alignment tool. For each alignment tool we also assessed various reference databases, including Ensembl reference genomes and different types of small RNA reference databases, including genome, hairpin, and miRNA references from the miRbase and MirGeneDB databases. To quantify the aligned data, we compared SAMtools, HTSeq, and RSEM for counting alignment events from each alignment tool used. Finally, we evaluated various tools, including DESeq2 and EdgeR, for data normalization and subsequent differential expression analysis. We will present the results from our comparative analyses for each pipeline step and propose a consensus pipeline for processing small RNAseq data derived from various organisms exposed to the space environment.

SmallRNAseq, NASA GeneLab, quality control, adapte↗

AIRS-Only Product in Giovanni for Exploring Up-to-Date AIRS Observation and Comparing with AIRS+AMSU Product

The NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) has been the home of processing, archiving, and distribution services for the Atmospheric Infrared Sounder (AIRS) mission since its launch in 2002 for global observations of the atmospheric state. Giovanni, a Web-based application developed by the GES DISC, provides a simple and intuitive way to visualize, analyze, and access vast amounts of Earth science remote sensing data without having to download the data. Most important AIRS variables, including temperature and humidity profiles, outgoing longwave radiation, cloud properties, and trace gases, are available in Giovanni. AIRS is an instrument suite comprised of a hyperspectral infrared instrument (AIRS) and two multichannel microwave instruments, the Advanced Microwave Sounding Unit (AMSU) and the Humidity Sounder for Brazil (HSB). As HSB ceased operation in the very early stages of the AIRS mission, the AIRS project operates two parallel retrieval algorithms: one using both IR and MW measurements (AIRS+AMSU) and the other using only IR measurements (AIRS-only), which covers most of the mission duration. The AIRS+AMSU product is better quality, and the variables in Giovanni are from this product. However, generation of the AIRS+AMSU product has been suspended since the AMSU instrument anomaly occurred in late September 2016. To continue exploring up-to-date AIRS observations, the same set of variables from the AIRS-only product have been added to Giovanni by the GES DSIC. This will also support comparison of AIRS-only with AIRS+AMSU retrievals. In this presentation, we demonstrate the visualization of the AIRS-only product and plots/statistics of comparison with AIRS+AMSU product using Giovanni.

AIRS↗

Prospects of federated machine learning in fluid dynamics

Physics-based models have been mainstream in fluid dynamics for developing predictive models. In recent years, machine learning has offered a renaissance to the fluid community due to the rapid developments in data science, processing units, neural network based technologies, and sensor adaptations. So far in many applications in fluid dynamics, machine learning approaches have been mostly focused on a standard process that requires centralizing the training data on a designated machine or in a data center. In this article, we present a federated machine learning approach that enables localized clients to collaboratively learn an aggregated and shared predictive model while keeping all the training data on each edge device. We demonstrate the feasibility and prospects of such a decentralized learning approach with an effort to forge a deep learning surrogate model for reconstructing spatiotemporal fields. Our results indicate that federated machine learning might be a viable tool for designing highly accurate predictive decentralized digital twins relevant to fluid dynamics.

36 MATERIALS SCIENCE↗

Distributed Active Archive Center

The Goddard Space Flight Center Version 0 Distributed Active Archive Center (GSFC V0 DAAC) is being developed to enhance and improve scientific research and productivity by consolidating access to remote sensor earth science data in the pre-EOS time frame. In cooperation with scientists from the science labs at GSFC, other NASA facilities, universities, and other government agencies, the DAAC will support data acquisition, validation, archive and distribution. The DAAC is being developed in response to EOSDIS Project Functional Requirements as well as from requirements originating from individual science projects such as SeaWiFS, Meteor3/TOMS2, AVHRR Pathfinder, TOVS Pathfinder, and UARS. The GSFC V0 DAAC has begun operational support for the AVHRR Pathfinder (as of April, 1993), TOVS Pathfinder (as of July, 1993) and the UARS (September, 1993) Projects, and is preparing to provide operational support for SeaWiFS (August, 1994) data. The GSFC V0 DAAC has also incorporated the existing data, services, and functionality of the DAAC/Climate, DAAC/Land, and the Coastal Zone Color Scanner (CZCS) Systems.

Bodden, Lee↗

The moderate resolution imaging spectrometer data system

Science requirements for a moderate resolution imaging spectrometer (MODIS) data system are outlined, as well as the operations concept and system specifications based on these requirements. Two systems are considered - MODIS-N for a 40-channel nadir-viewing scanner and MODIS-T for a 64-channel tiltable scanner. The first system collects data from 15 thermal-infrared channels at all times and from 25 reflected-energy channels during daytime, while MODIS-T will take data from 64 channels on a 100-percent duty cycle during daytime only. Standard data products, data acquisition and processing, and requirements on data are discussed. Emphasis is placed on the interfaces between the science data processing facilities and the scientific users.

Han, Daesoo↗

Developing a Machine-Learning-Based Processing Framework for Twitter and Other Crowdsourced Data

Crowdsourced data streams such as Twitter and other social media are important sources of real-time and historical global information for Earth science applications. At the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC), we have been exploring the Twitter data stream for its potential in augmenting the validation program of NASA's Global Precipitation Measurement (GPM) mission. To realize this potential, we need to increase the information density and enhance the quality of filtered precipitation tweets. We have implemented various components of a machine learning (ML)-based processing infrastructure for crowdsourced data that outputs, in this instance, useful and usable information derived from precipitation tweets. We have test enriched the Twitter stream with higher quality active tweets from those knowingly contributing to our effort and from existing crowdsourced programs (e.g., mPING, CoCoRaHS). We have experimented with various algorithms for processing tweets, including Naà ve Bayes, Convolutional Neural Network (CNN), Hierarchical Attention Network (HAN), and semi-supervised learning (with tri-training). Our current work focuses on (1) automated review of Earth science-related publications to determine relationships between discipline research needs and ML algorithms; (2) investigating Sequential Generative Adversarial Network (SeqGAN) for processing precipitation tweets for anomaly detection; and (3) managing crowdsourced data in a way that is compatible with existing NASA satellite data archives and using the data for ML applications. Key results include (1) network visualization of NLP-processed publications in various Earth science disciplines; (2) difference between GPM-linked, generated tweets and collected actual tweets that is small for GPM-determined light to moderate rain cases and high for GPM-determined heavy rain cases; and (3) identification of MongoDB for storing raw tweets and Zarr format for gridded tweets (compatible with GPM data). Our results have taken us a step closer to an operational ML-based tweet processing infrastructure and have already demonstrated that tweet-derived precipitation information is potentially useful for validation of Earth science satellite data.

Teng, William↗

Determination of Ceres Physical Parameters Using Radiometric and Optical Data

The Dawn spacecraft was launched on September 27th, 2007. Its mission is to rendezvous with and observe the two largest bodies in the main asteroid belt, Vesta and Ceres. It has completed over a year’s worth of direct observations of Vesta from early 2011 through late 2012. In the spring of 2015, the Dawn spacecraft entered orbit around the asteroid Ceres for the start of what is expected to be more than a year of science operations. The science data collected from this encounter consist of infrared (IR) images and spectra, visible images through a number of color filters, gamma ray detections and measurements of the Ceres gravity field. These data will be collected during several science phases: an Approach phase (1500000-4860 km from Ceres), a Survey orbit (4860 km radius), a High Altitude Mapping Orbit (HAMO) (1940 km radius) and a Low Altitude Mapping Orbit (LAMO) (855 km radius). The Approach phase included three Rotational Characterization (RC) opportunities. Designing each science orbit and successfully transferring into that orbit requires a sufficiently accurate estimate of Ceres physical parameters (body fixed frame, GM and harmonics). This paper focuses on work performed to estimate Ceres physical parameters using Deep Space Network (DSN) radiometric tracking data and optical measurements derived from science camera imagery. This paper describes planning for the data acquisition, as well as processing techniques and methodology. The trajectories predicted by the gravity field estimations are also compared with the actual as-flown trajectories. Observations of the gravity at high altitudes are found to be sufficient to design precision orbits at lower altitudes. Follow-up analysis after successfully reaching LAMO is included, as is a discussion of lessons learned.

Kennedy, Brian M.↗

The Environmental Data Application for Analysis of Space Telemetry Data

Sensors on the International Space Station (ISS) and multiple spacecraft elsewhere in Earth orbit and in deep space continuously monitor and collect environmental data, transmitting this information back to Earth. These data include ionizing radiation and, on the ISS and spacecrafts, CO2, relative humidity levels, and temperature, and are of great importance to space biology research. Looking ahead to future long duration crewed missions beyond low Earth orbit, the ability to study how factors including CO2 levels, light cycle, temperature modulate the response to ionizing radiation and microgravity is essential. To date, access to these data has been fragmented across space agencies, spacecraft, and databases. To address this issue, NASA’s Open Science Data Repository (OSDR) has developed a user interface for interrogation of telemetry data: the Environmental Data Application (EDA). The EDA provides the capability to visualize telemetry and radiation data collected on the International Space Station and corresponding ground platforms during the Rodent Research missions. Telemetry data includes temperature, relative humidity, and CO2 levels. Radiation data includes galactic cosmic rays, the contribution of the South Atlantic Anomaly, total radiation dose rate, and accumulated radiation dose. The application allows users to view single missions, compare multiple missions, and view and download summary or full data tables. In summary, the EDA provides GUIs for data visualization and exploration, as well as means for data export, making these data FAIR (Findable, Accessible, Interoperable, and Reusable), complementing the biological data contained in OSDR, and providing the space science community with a valuable resource for scientific analyses.

telemetry↗

Communicating by Doppler: Detecting Spacecraft Dynamics During Critical Maneuvers

Communicating information from spacecraft in deep space utilizes sophisticated techniques of modulations onto a microwave signal carrier. Under most conditions, there is a high success rate of sending commands to the spacecraft and receiving science data acquired by on-board instruments along with health and status information. There are conditions, however, where the signal dynamics are too high and/or the received signal-to-noise ratio is below the receiver threshold. Under these conditions, often by design and sometimes as a result of planned or unplanned critical maneuvers, events (e.g., orbit insertion or descent and landing), safe mode, etc., it becomes highly critical but exceedingly challenging to receive information about the health and dynamical behavior of the spacecraft. The Deep Space Network, being a world-class instrument for Radio Science research, developed openloop receivers, called the Radio Science Receiver, designed to capture the raw incoming electromagnetic signals and associated noise for Radio Science experiments; post data capture digital signal processing extracts the signal carrier for scientific analysis. This receiver provides a high level of configuration flexibility and can be optimized for the various types of experiments. In addition to its scientific utility, it proved to be useful, and in some cases critical, for the support of missions during specific scenarios were the link budget is below the threshold of the tracking receiver to maintain lock or the frequency dynamics are faster than the limits of the tracking receiver. In these cases, the signal carrier is often detected only in the open-loop receiver to provide information on the specific behavior of the spacecraft from the carrier dynamics. This paper describes the utility of the system to support mission-critical events for the three cases of Cassini's Saturn orbit insertion, Huygens Titan landing, and Mars rovers landing.

radio science↗

Data Reduction for Science: Brochure from the Advanced Scientific Computing Research Workshop

Data reduction for science holds promise for addressing the challenges of moving, storing, and processing massive data sets produced by the scientific community. Pursuing the PRDs outlined here will enable advances in data streaming, fast feedback and/or autonomous control of experiments, and faster time to scientific insight. These advances will result in a significant improvement in the ability to transport, store, process and interpret experimental, observational, and computational data.

97 MATHEMATICS AND COMPUTING↗

Big Data, Cloud, and Earth Science

Given the reality of a Big Data future, we need to reevaluate our ability to quickly process immense amounts of data while maintaining our responsibility of stewarding our archives. At National Aeronautics and Space Administration (NASA), our Science Missions Directorate and Earth Science Data Systems have been exploring the commercial cloud as a potential mechanism for data ingest, archive, and distribution since 2015. This talk will discuss our timeline and strategies being employed and will discuss the process of introducing commercial cloud entities into a largely on-premise hardware-reliant approach to ingest, archive, and distribution. We will address topics such as vendor lock-in, varying compute and costing strategies, and end-user adoption. Please join us for an open and authentic conversation about the opportunities we are embracing and the risks we are undertaking as a part of this evolution.

Informatics↗