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At least 1,279 records · Page 71

Single Gaussian process method for arbitrary tokamak regimes with a statistical analysis

Abstract Gaussian process regression is a Bayesian method for inferring profiles based on input data. The technique is increasing in popularity in the fusion community due to its many advantages over traditional fitting techniques including intrinsic uncertainty quantification and robustness to over-fitting. This work investigates the use of a new method, the change-point method, for handling the varying length scales found in different tokamak regimes. The use of the Student’s t-distribution for the Bayesian likelihood probability is also investigated and shown to be advantageous in providing good fits in profiles with many outliers. To compare different methods, synthetic data generated from analytic profiles is used to create a database enabling a quantitative statistical comparison of which methods perform the best. Using a full Bayesian approach with the change-point method, Matérn kernel for the prior probability, and Student’s t-distribution for the likelihood is shown to give the best results.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Linear clusters of galaxies - A999 and A1016

Redshifts have been measured for galaxies in two of the 'linear' clusters of the sample of Adams, Strom, and Strom (1980), including 44 redshifts in A999 and 40 in A1016. From the data, it is concluded that the galaxies in A999 are probably drawn from a spherically symmetric distribution, while those in A1016 probably are not. Both A999 and A1016 have mass-to-light ratios lower than typical of other clusters. The effect of anisotropy on the determination of cluster masses from the virial theorem is examined, and it is found that if the shortest axes of these clusters are close to the line of sight, the mass-to-light ratio may be underestimated by about 50 percent. No significant evidence is found for alignments of individual cluster members with the cluster axis in the convincing linear cluster A1016. There is similarly no evidence of segregation by luminosity morphological type in A1016.

Chapman, G. N. F.↗

Data-driven predictive probability density function control of fiber length stochastic distribution shaping in refining process

Pulp is the most important raw material in paper in paper industries, whose Fiber Length Stochastic Distribution (FLSD) shaping directly determines the energy consumption and paper quality of the subsequent papermaking processes. However, the mean and variance are insufficient to describe the output FLSD shaping, which display non-Gaussian distribution properties. Therefore, the traditional control, method based on the mean and variance of fiber length is difficult to control the FLSD shaping effectively. In this paper, a novel data-driven predictive probability density function (PDF) control method is proposed for output FLSD shaping in refining process. Primarily, in order to improve the approximation accuracy of the PDF employing RBF neural network, the parameters (center value and width) of each RBF basis functions are tuned via utilizing iterative learning control (ILC) law, and the corresponding estimations of weights law can be obtained. Secondly, considering that the conventional linear model of weights vector has drawbacks of low accuracy and weak generalization ability, random vector functional link networks (RVFLNs) based data driven nonlinear modelling method is employed to characterize the prediction model between the input variables and weights vector. Finally, in order to reduce the randomness of the output FLSD, a minimum entropy control method under mean constraint is employed to design the predictive PDF controller for the output FLSD shaping with the help of the established nonlinear stochastic distribution model. Both simulations and experiments are given to illustrate the effectiveness and practicability of the proposed method.

Probability debsity function, Fiber length distrib↗

Generative unfolding with distribution mapping

Machine learning enables unbinned, highly-differential cross section measurements. A recent idea uses generative models to morph a starting simulation into the unfolded data. We show how to extend two morphing techniques, Schrödinger Bridges and Direct Diffusion, in order to ensure that the models learn the correct conditional probabilities. This brings distribution mapping (DM) to a similar level of accuracy as the state-of-the-art conditional generative unfolding methods. Numerical results are presented with a standard benchmark dataset of single jet substructure as well as for a new dataset describing a 22-dimensional phase space of Z+2 -jets.

Butter, Anja↗

A two-scale scattering model with application to the JONSWAP '75 aircraft microwave scatterometer experiment

The general problem of bistatic scattering from a two scale surface was evaluated. The treatment was entirely two-dimensional and in a vector formulation independent of any particular coordinate system. The two scale scattering model was then applied to backscattering from the sea surface. In particular, the model was used in conjunction with the JONSWAP 1975 aircraft scatterometer measurements to determine the sea surface's two scale roughness distributions, namely the probability density of the large scale surface slope and the capillary wavenumber spectrum. Best fits yield, on the average, a 0.7 dB rms difference between the model computations and the vertical polarization measurements of the normalized radar cross section. Correlations between the distribution parameters and the wind speed were established from linear, least squares regressions.

Wentz, F. J.↗

GASP cloud encounter statistics - Implications for laminar flow control flight

The cloud observation archive from the NASA Global Atmospheric Sampling Program (GASP) is analyzed in order to derive the probability of cloud encounter at altitudes normally flown by commercial airliners, for application to a determination of the feasability of Laminar Flow Control (LFC) on long-range routes. The probability of cloud encounter is found to vary significantly with season. Several meteorological circulation features are apparent in the latitudinal distribution of cloud cover. The cloud encounter data are shown to be consistent with the classical midlatitude cyclone model with more clouds encountered in highs than in lows. Aircraft measurements of route-averaged time-in-clouds fit a gamma probability distribution model which is applied to estimate the probability of extended cloud encounter, and the associated loss of LFC effectiveness along seven high-density routes. The probability is demonstrated to be low.

Jasperson, W. H.↗

Statistical parameters of reverberating fields, calculated by computer

A method, developed for making measurements in reverberation chambers in the steady state mode, is reported. Spatial distribution patterns of the square of the sound pressure vs type of exciting signal were produced theoretically and checked experimentally in a reverberation chamber. Results of measurements of spatial irregularities of the field with pure tones and with noise bands in the 200 to 2,000 Hz frequency range were used for calculating statistical parameters of the reverbation fields by computer. The calculation program included determination of density probability function, integral distribution pattern, mathematical expectation, normalized dispersion of the mean square of the pressure.

Lebedeva, I. V.↗

Integrated Hardware and Software for No-Loss Computing

When an algorithm is distributed across multiple threads executing on many distinct processors, a loss of one of those threads or processors can potentially result in the total loss of all the incremental results up to that point. When implementation is massively hardware distributed, then the probability of a hardware failure during the course of a long execution is potentially high. Traditionally, this problem has been addressed by establishing checkpoints where the current state of some or part of the execution is saved. Then in the event of a failure, this state information can be used to recompute that point in the execution and resume the computation from that point. A serious problem arises when one distributes a problem across multiple threads and physical processors is that one increases the likelihood of the algorithm failing due to no fault of the scientist but as a result of hardware faults coupled with operating system problems. With good reason, scientists expect their computing tools to serve them and not the other way around. What is novel here is a unique combination of hardware and software that reformulates an application into monolithic structure that can be monitored in real-time and dynamically reconfigured in the event of a failure. This unique reformulation of hardware and software will provide advanced aeronautical technologies to meet the challenges of next-generation systems in aviation, for civilian and scientific purposes, in our atmosphere and in atmospheres of other worlds. In particular, with respect to NASA s manned flight to Mars, this technology addresses the critical requirements for improving safety and increasing reliability of manned spacecraft.

James, Mark↗

Evaluating Precipitation Features and Rainfall Characteristics in a Multi-scale Modeling Framework

Cloud and precipitation systems over the tropics and subtropics are simulated with a multi-scale modeling framework (MMF) and compared against the TRMM radar precipitation features (RPFs) product. A methodology, in close analogy to the TRMM RPFs, is developed to analyze simulated cloud precipitating structures from the embedded two-dimensional cloud-resolving models (CRMs) within an MMF. Despite the two-dimensionality of the CRMs, the simulated RPFs population distribution, and horizontal and vertical structure are in good agreement with TRMM observations. However, some deficits are also found in the model simulations. The model tends to overestimate mean convective precipitation rates for RPFs with a size less than 100 km, contributing to the excessive precipitation biases in the warm pool and western Pacific, western and northern India Ocean, and eastern Pacific commonly found in most MMFs. For large features with a size greater than 150 km, both convective and stratiform rain rates are underestimated. The distribution of maximum radar echo top heights as a function of RPF size is well simulated except the model tends to underestimate the occurrence frequency of maximum heights greater than 15 km. The maximum echo top heights for convective cells embedded within large RPFs with a size greater than 150 km are also underestimated. The cyclic lateral boundary with a limited model domain generates artificial occurrences for RPFs with a size close to the model domain size, producing a significant contribution to the total rainfall due to their sizes. This cyclic lateral boundary effect can be easily identified and quantified in both probability and cumulative distribution functions of RPFs. The geophysical distribution of the population of the largest RPFs in the control experiment shows they are mainly located in the Subtropics but also partially contribute to the common MMF biases of excessive precipitation in the Tropics. Sensitivity experiments using CRMs with different domain sizes and different grid spacings show larger domains (higher resolution) tend to shift the RPFs distribution to large (small) sizes. The cyclic lateral boundary biases increase as CRM domain size decreases. The impacts of model horizontal and vertical resolution on simulated convective systems are also investigated.

Chern, Jiun-Dar↗

Analysis of Terminal Deletions using a Generalized Time-Dependent Model of Radiation-Induced Formation of Chromosomal Aberrations

We have developed a model that can simulate different types of radiation induced chromosomal aberrations (CA's) and can provide predictions on the frequency and size of chromosomes with terminal deletions. Chromosomes with terminal deletions lack telomeres and this can elicit sister chromatid unions and the prolonged breakage/fusion/bridge (B/F/B) cycles that have been observed in mammalian tumors. The loss of a single telomere has been shown to cause extensive genomic instability through the B/F/B cycle process. Our model uses a stochastic process of DNA broken end joining, in which a realistic spectrum of CA's is created from improperly joined DNA free ends formed by DNA double strand breaks (DSBs). The distribution of the DNA free ends is given by a mechanistic model that takes into account the chromatin structure and track structure for high-LET radiation. The model allows for DSB clustering from high-LET radiation and simulates the formation of CA's in stages that correspond to the actual time after radiation exposure. The time scale for CA formation is derived from experimental data on DSB repair kinetics. At any given time a nucleus may have intact chromosomes, CA's, and/or unrepaired fragments, some of which are defined as terminal deletions, if they are capped by one telomere. The model produces a spectrum of terminal deletions with their corresponding probabilities and size distributions for different heavy ions exposures for the first division after exposure. This data provides valuable information because there is limited experimental data available in the literature on the on the actual size of terminal deletions. We compare our model output to the available experimental data and make a reasonable extrapolation on the number of chromosomes lacking telomeres in human lymphocytes exposed to heavy ions. This model generates data which may lead to predictions on the rate of genomic instability in cells after exposure to high charge and energy nuclei affecting astronauts during space missions.

Ponomarev, Artem L.↗

Monte Carlo simulations of neutrino and charged lepton propagation in the Earth with nuPyProp

An accurate modeling of neutrino flux attenuation and the distribution of leptons they produce in transit through the Earth is an essential component to determine neutrino flux sensitivities of underground, sub-orbital and space-based detectors. Through neutrino oscillations over cosmic distances, astrophysical neutrino sources are expected to produce nearly equal fluxes of electron, muon and tau neutrinos. Of particular interest are tau neutrinos that interact in the Earth at modest slant depths to produce leptons. Some leptons emerge from the Earth and decay in the atmosphere to produce extensive air showers. Future balloon-borne and satellite-based opticalCherenkov neutrino telescopes will be sensitive to upward air showers from tau neutrino induced lepton decays. We present nuPyProp, a python code that is part of the nuSpaceSim package. nuPyProp generates look-up tables for exit probabilities and energy distributions for (see paper for proper equation) propagation in the Earth. This flexible code runs with either stochastic or continuous electromagnetic energy losses for the lepton transit through the Earth. Current neutrino cross section models and energy loss models are included along with templates for user input of other models. Results from nuPyProp are compared with other recent simulation packages for neutrino and charged lepton propagation. Sources of modeling uncertainties are described and quantified.

Yosui Akaike↗

Linear geologic structure and magic rock discrimination as determined from infrared data

Color infrared photographs of the Beartooth Mountains, Montana show the distribution of mafic dikes and amphibolite bodies. Lineaments that cross grassy plateaus can be identified as dikes by the marked constrast between the dark rocks and the red vegetation. Some amphibolite bodies in granitic terrain can also be detected by infrared photography and their contacts can be accurately drawn due to enchanced contrast of the two types of rock in the near infrared. Reflectance measurements made in the field for amphibolite and granite show that the granite is 25% to 50% more reflective in the near infrared than in the visible region. Further enhancement is due to less atmospheric scattering than in the visible region. Thermal infrared images of the Mill Creek, Oklahoma test site provided information on geologic faults and fracture systems not obtainable from photographs. Subtle stripes that cross outcrop and intervening soil areas and which probably record water distribution are also shown on infrared photographs.

Offield, T. W.↗

Dissociative Ionization and Product Distributions of Benzene and Pyridine by Electron Impact

We report a theoretical study of the dissociative ionization (DI) and product distributions of benzene (C6H6) and pyridine (C5H5N) from their low-lying ionization channels. Our approach makes use of the fact that electronic motion is much faster than nuclear motion allowing DI to be treated as a two-step process. The first step is the electron-impact ionization resulting in an ion with the same nuclear geometry as the neutral molecule. In the second step, the nuclei relax from the initial geometry and undergo unimolecular dissociation. For the ionization process we use the improved binary-encounter dipole (iBED) model [W.M. Huo, Phys. Rev. A64,042719-I (2001)]. For the unimolecular dissociation, we use multiconfigurational self-consistent field (MCSCF) methods to determine the steepest descent pathways to the possible product channels. More accurate methods are then used to obtain better energetics of the paths which are used to determine unimolecular dissociation probabilities and product distributions. Our analysis of the dissociation products and the thresholds of their productions for benzene are compared with the recent dissociative photoionization meausurements of benzene by Feng et al. [R. Feng, G. Cooper, C.E. Brion, J. Electron Spectrosc. Relat. Phenom. 123,211 (2002)] and the dissociative photoionization measurements of pyridine by Tixier et al. [S. Tixier, G. Cooper, R. Feng, C.E. Brion, J. Electron Spectrosc. Relat. Phenom. 123,185 (2002)] using dipole (e,e+ion) coincidence spectroscopy.

Dateo, Christopher E.↗

An Experimental Study of Small-Scale Variability of Raindrop Size Distribution

An experimental study of small-scale variability of raindrop size distributions (DSDs) has been carried out at Wallops Island, Virginia. Three Joss-Waldvogel disdrometers were operated at a distance of 0.65, 1.05, and 1.70 km in a nearly straight line. The main purpose of the study was to examine the variability of DSDs and its integral parameters of liquid water content, rainfall, and reflectivity within a 2-km array: a typical size of Cartesian radar pixel. The composite DSD of rain events showed very good agreement among the disdrometers except where there were noticeable differences in midsize and large drops in a few events. For consideration of partial beam filling where the radar pixel was not completely covered by rain, a single disdrometer reported just over 10% more rainy minutes than the rainy minutes when all three disdrometers reported rainfall. Similarly two out of three disdrometers reported5%more rainy minutes than when all three were reporting rainfall. These percentages were based on a 1-min average, and were less for longer averaging periods. Considering only the minutes when all three disdrometers were reporting rainfall, just over one quarter of the observations showed an increase in the difference in rainfall with distance. This finding was based on a 15-min average and was even less for shorter averaging periods. The probability and cumulative distributions of a gamma-fitted DSD and integral rain parameters between the three disdrometers had a very good agreement and no major variability. This was mainly due to the high percentage of light stratiform rain and to the number of storms that traveled along the track of the disdrometers. At a fixed time step, however, both DSDs and integral rain parameters showed substantial variability. The standard deviation (SD) of rain rate was near 3 mm/h, while the SD of reflectivity exceeded 3 dBZ at the longest separation distance. These standard deviations were at 6-min average and were higher at shorter averaging periods. The correlations decreased with increasing separation distance. For rain rate, the correlations were higher than previous gauge-based studies. This was attributed to the differences in data processing and the difference in rainfall characteristics in different climate regions. It was also considered that the gauge sampling errors could be a factor. In this regard, gauge measurements were simulated employing existing disdrometer dataset. While a difference was noticed in cumulative distribution of rain occurrence between the simulated gauge and disdrometer observations, the correlations in simulated gauge measurements did not differ from the disdrometer measurements.

Tokay, Ali↗

The Latent Dirichlet Allocation model applied to airborne LiDAR data: A case study on mapping forest degradation associated with fragmentation and fire in the Amazon region

1. LiDAR data are being increasingly used to provide a detailed characterization of the vertical profile of forests. This characterization enables the generation of new insights on the influence of environmental drivers and anthropogenic disturbances on forest structure as well as on how forest structure influences important ecosystem functions and services. Unfortunately, extracting information from LiDAR data in a way that enables the spatial visualization of forest structure, as well as its temporal changes, is challenging due to the high dimensionality of these data. 2. In this study, we show how the Latent Dirichlet Allocation model applied to LiDAR data (LidarLDA) can be used to identify forest structural types and how the relative abundance of these forest types changes throughout the landscape. The code to fit this model is made available through the open-source r package LidarLDA in github. We illustrate the use of LidarLDA both with simulated data and data from a large-scale fire experiment in the Brazilian Amazon region. 3. Using simulated data, we demonstrate that LidarLDA accurately identifies the number of forest types as well as their spatial distribution and absorptance probabilities. For the empirical data, we found that LidarLDA detects both landscape-level patterns in forest structure as well as the strong interacting effect of fire and forest fragmentation on forest structure based on the experimental fire plots. More specifically, LidarLDA reveals that proximity to forest edge exacerbates the impact of fires, and that burned forests remain structurally different from unburned areas for at least 7 years, even when burned only once. Importantly, LidarLDA generates insights on the 3D structure of forest that cannot be obtained using more standard approaches that just focus on top-of-the-canopy information (e.g. canopy height models based on LiDAR data). 4. By enabling the mapping of forest structure and its temporal changes, we believe that LidarLDA will be of broad utility to the ecological research community.

54 ENVIRONMENTAL SCIENCES↗

Tuning Shinkarev’s Bicycle: Separating the Parallel Cycles of Photosystem II Using Empirical Wavelet Transform

The oxygen-evolving complex (OEC) of Photosystem II (PSII) catalyzes light-driven water oxidation, a process necessary to sustain Earth’s atmospheric oxygen. Oxygen yields measured during single-turnover flash sequences exhibit period-four oscillations, which form the basis of the Joliot–Kok (S-state) model. However, when the oscillations of other processes contribute to the measured oxygen yield, fitting methods can conflate these signals and distort estimates of inefficiencies and initial S-state populations. To address this, we applied the empirical wavelet transform (EWT) as a model-independent method to separate overlapping oscillators and capture damping dynamics that are not well represented in Fourier analysis. We tested this framework on polarographic flash-oxygen traces from both our Synechocystis sp. PCC 6803 thylakoid membrane preparations and archival datasets on Chlorella and isolated chloroplasts. EWT consistently resolves the expected period-four component alongside a distinct binary oscillation. Simulations suggest that fitting this isolated period-four signal recovers VZAD parameters more accurately than analysis of raw traces, yielding different estimates for S-state distributions and transition probabilities. Notably, this binary oscillation aligns closely with semiquinone dynamics predicted solely from period-four fit parameters. These findings indicate that EWT can effectively distinguish complex signals in oxygen evolution, offering a framework potentially applicable to other spectroscopic probes of the S-state cycle.

Ferrari, Nicholas [Louisiana State Univ., Baton Ro↗

Astromers: Nuclear Isomers in Astrophysics

In this work, we develop a method to compute thermally mediated transition rates between the ground state and long-lived isomers in nuclei. We also establish criteria delimiting a thermalization temperature above which a nucleus may be considered a single species and below which it must be treated as two separate species: a ground-state species and an astrophysical isomer ("astromer") species. Below the thermalization temperature, the destruction rates dominate the internal transition rates between the ground state and the isomer. If the destruction rates also differ greatly from one another, the nuclear levels fall out of or fail to reach thermal equilibrium. Without thermal equilibrium, there may not be a safe assumption about the distribution of occupation probability among the nuclear levels when computing nuclear reaction rates. In these conditions, the isomer has astrophysical consequences and should be treated as a separate astromer species which evolves separately from the ground state in a nucleosynthesis network. We apply our transition-rate methods and perform sensitivity studies on a few well-known astromers. We also study transitions in several other isomers of likely astrophysical interest.

79 ASTRONOMY AND ASTROPHYSICS↗