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At least 1,279 records · Page 71

A Variable Resolution Stretched Grid General Circulation Model: Regional Climate Simulation

The development of and results obtained with a variable resolution stretched-grid GCM for the regional climate simulation mode, are presented. A global variable resolution stretched- grid used in the study has enhanced horizontal resolution over the U.S. as the area of interest The stretched-grid approach is an ideal tool for representing regional to global scale interaction& It is an alternative to the widely used nested grid approach introduced over a decade ago as a pioneering step in regional climate modeling. The major results of the study are presented for the successful stretched-grid GCM simulation of the anomalous climate event of the 1988 U.S. summer drought- The straightforward (with no updates) two month simulation is performed with 60 km regional resolution- The major drought fields, patterns and characteristics such as the time averaged 500 hPa heights precipitation and the low level jet over the drought area. appear to be close to the verifying analyses for the stretched-grid simulation- In other words, the stretched-grid GCM provides an efficient down-scaling over the area of interest with enhanced horizontal resolution. It is also shown that the GCM skill is sustained throughout the simulation extended to one year. The developed and tested in a simulation mode stretched-grid GCM is a viable tool for regional and subregional climate studies and applications.

Fox-Rabinovitz, Michael S.↗

Self-interaction of NPM1 modulates multiple mechanisms of liquid–liquid phase separation

Nucleophosmin (NPM1) is an abundant, oligomeric protein in the granular component of the nucleolus with roles in ribosome biogenesis. Pentameric NPM1 undergoes liquid–liquid phase separation (LLPS) via heterotypic interactions with nucleolar components, including ribosomal RNA (rRNA) and proteins which display multivalent arginine-rich linear motifs (R-motifs), and is integral to the liquid-like nucleolar matrix. Here we show that NPM1 can also undergo LLPS via homotypic interactions between its polyampholytic intrinsically disordered regions, a mechanism that opposes LLPS via heterotypic interactions. Using a combination of biophysical techniques, including confocal microscopy, SAXS, analytical ultracentrifugation, and single-molecule fluorescence, we describe how conformational changes within NPM1 control valency and switching between the different LLPS mechanisms. We propose that this newly discovered interplay between multiple LLPS mechanisms may influence the direction of vectorial pre-ribosomal particle assembly within, and exit from the nucleolus as part of the ribosome biogenesis process.

59 BASIC BIOLOGICAL SCIENCES↗

Spontaneous self-assembly of amyloid β (1–40) into dimers

The self-assembly and fibrillation of amyloid β (Aβ) proteins is the neuropathological hallmark of Alzheimer's disease. However, the molecular mechanism of how disordered monomers assemble into aggregates remains largely unknown. In this work, we characterize the assembly of Aβ (1–40) monomers into dimers using long-time molecular dynamics simulations. Upon interaction, the monomers undergo conformational transitions, accompanied by change of the structure, leading to the formation of a stable dimer. The dimers are stabilized by interactions in the N-terminal region (residues 5–12), in the central hydrophobic region (residues 16–23), and in the C-terminal region (residues 30–40); with inter-peptide interactions focused around the N- and C-termini. The dimers do not contain long β-strands that are usually found in fibrils.

59 BASIC BIOLOGICAL SCIENCES↗

Special Issue of IJGGC: Nexus of Water and Carbon Capture and Storage

The mission of the Regional Carbon Sequestration Partnership (RCSP) Water Working Group (WWG) is to address stakeholder concerns regarding emerging carbon capture and storage (CCS) technology and potential interactions with local and regional water resources. As part of that mission, the WWG has been working with the International Journal of Greenhouse Gas Control (IJGGC) to develop a Special Issue dedicated to the nexus of water and CCS. Research papers were solicited, edited, and subsequently published in IJGGC. These articles were then submitted to IJGGC on December, 29, 2016, to be published online in a virtual special issue. The articles published in the virtual special issue build upon the research that has been published in IJGGC over the previous 4 years to complete a more comprehensive understanding of water issues associated with CCS.

54 ENVIRONMENTAL SCIENCES↗

Environmental Effects on Volcanic Eruptions:From Deep Ocean to Deep Space. Chapter 3. Volcanism and Ice Interactions on Earth and Mars

CONCLUSION Volcano/ice interactions produce meltwater. Meltwater can enter the groundwater cycle and under the influence of hydrothermal systems, it can be later discharged to form channels and valleys or cycled upward to melt permafrost. Water or ice-saturated ground can erupt into phreatic craters when covered by lava. Violent mixing of meltwater and volcanic material and rapid release can generate lahars or jokulhlaups, that have the ability to freight coarse material, great distances downslope from the vent. Eruption into meltwater generate unique appearing edifices, that are definitive indicators of volcano/ice interaction. These features are hyaloclastic ridges or mounds and if capped by lava, tuyas. On Earth, volcano/ice interactions are limited to alpine regions and ice-capped polar and temperate regions. On Mars, where precipitation may be an ancient phenomenon, these interactions may be limited to areas of ground ice accumulation or the northern lowlands where water may have ponded fairly late in martian history. The recognition of features caused by volcano/ice interactions could provide strong constraints for the history of volatiles on Mars.

Chapman, Mary G.↗

Urban morphology and urban water demand: a case study in the land constrained Los Angeles region using urban growth modeling

The interactions between population growth, urban morphology, and water demand have important implications for water resources and supply in urban regions. Water use for irrigation comprises a significant fraction of urban water demand, and is potentially influenced by long-term changes in urban morphology. To investigate this, we used spatially explicit projections of urban land development intensity (fraction impervious area) generated from a 30 m resolution urban growth model for the Los Angeles (LA) region. Recent historical data on water use and high resolution landcover were used to establish relationships between green area, urban development intensity, and outdoor water demand. These relationships were then used to project outdoor and total water demand in 2100 using the urban growth model outputs. We considered two different population scenarios informed by the shared socioeconomic pathway (SSP) projections for the region (SSP3 and SSP5), and three scenarios of urban development intensification. Our analysis is resolved for over 80 water providers in the region, from the urban core to suburban fringe, and highlights diverse demand responses influenced by initial urban form and water demand attributes. Assumptions about outdoor water use factors based on recent water supply data were found to be nearly as influential on future outdoor demand as the urban growth scenario settings. Compared to previous studies, our work is unique in coherently linking high resolution SSP population scenarios, urban land cover evolution, and urban water demand projections, demonstrating the approach for the LA region—the largest population center in the western United States.

54 ENVIRONMENTAL SCIENCES↗

Shock-wave-induced mixing enhancement in scramjet combustors

An experimental study of the interaction between a weak shock wave and a supersonic shear layer was carried out to determine the possibility of shock-induced mixing enhancement. A supersonic (Mach 2.5) stream of nitrogen was mixed with a sonic helium jet downstream of a rearward-facing step to simulate the mixing region in the vicinity of a SCRAMJET flameholder. A small wedge was used to generate an oblique shock wave that impinges on the mixing layer. Schlieren flow visualization and Rayleigh scattering concentration measurements were carried out. The results indicate that significant spreading of the shear layer may occur downstream of the shock/shear layer interaction region. Further study is required to determine the mechanism of the observed spreading and the extent of the increase in mixing efficiency. Since there are shock-induced losses, an optimum mixing enhancement configuration will have to be determined before the method can be validated and successfully implemented in a SCRAMJET combustor.

Menon, S.↗

Challenges in Modeling the Sun-Earth System

The transfer of mass, energy and momentum through the coupled Sun-Earth system spans a wide range of scales in time and space. While profound advances have been made in modeling isolated regions of the Sun-Earth system, minimal progress has been achieved in modeling the end-to-end system. Currently, end-to-end modeling of the Sun-Earth system is a major goal of the National Space Weather and NASA Living With a Star (LWS) programs. The uncertainty in the underlying physics responsible for coupling contiguous regions of the Sun-Earth system is recognized as a significant barrier to progress. Our limited understanding of the underlying coupling physics is illustrated by the following example questions: how does the propagation of a typical CME/solar flare influence the measured properties of the solar wind at 1 AU? How does the solar wind compel the dynamic response of the Earth's magnetosphere? How is variability in the ionosphere-thermosphere system coupled to magnetospheric variations? Why do these and related important questions remain unanswered? What are the primary problems that need to be resolved to enable significant progress in comprehensive modeling of the Sun-Earth system? Which model/technique improvements are required and what new data coverage is required to enable full model advances? This poster opens the discussion for how these and other important questions can be addressed. A workshop scheduled for October 8-22, 2004 in Huntsville, Alabama, will be a forum for identifying ana exploring promising new directions and approaches for characterizing and understanding the system. To focus the discussion, the workshop will emphasize the genesis, evolution, propagation and interaction of high-speed solar wind streamers or CME/flares with geospace and the subsequent response of geospace from its outer reaches in the magnetosphere to the lower edge of the ionosphere-mesosphere-thermosphere. Particular emphasis will be placed on modeling the coupling aspects of these phenomena across boundaries between regions and on data analysis that guides and constrains model results. Specific topics to be addressed are: Corotating interaction regions, Coronal mass ejections, Energetic particles, System preconditioning, Extreme events and super storms, End-to-End modeling efforts.

Spann, James↗

Safety concerns towards the biomedical application of PbS nanoparticles: An approach through protein-PbS interaction and corona formation

Semiconductor nanoparticles (NPs) with near-infrared (NIR) fluorescence has achieved great interest for early detection of colon tumors/cancer. We have synthesized lead sulphide (PbS) NPs (5–7 nm) having emission in NIR region and investigated its interaction with bovine serum albumin (BSA) to determine the bio-safety of PbS NPs. The interaction of PbS NPs with BSA occurs through formation of “hard” and “soft” protein NPs corona and follows exponential association. The hard corona represents that the core PbS NPs are fully covered by BSA with shell thickness of ∼8 nm, i.e., the dimension of BSA monomer. A large number of PbS NPs with hard corona of BSA forms “colony” with diameters in the range of 200–400 nm. The soft corona grows surrounding this colony. The quenching of fluorescence BSA in the presence of PbS NPs follows dynamic quenching process with tryptophan as major binding sites. Nearest to human body temperature, positive cooperative association between PbS NPs and BSA are found, and affinity of BSA to the PbS NPs gradually increases in superlinear fashion. The electrostatic interaction is the key force in binding of PbS NPs with BSA, and hydrophobic interaction between PbS NPs and BSA is responsible for conformational change of BSA.

60 APPLIED LIFE SCIENCES↗

Tether-Induced Airglow: Collisionless Effects

Martinez-Sanchez and Sanmartin [1997] showed that a bare conducting tether can be used as a source of an energetic electron beam. Interacting with the E region atmosphere, the beam should produce airglow thus making possible to deduce the neutral density on a continuous basis. Fujii et al. [2005] suggested that this idea be tested in a specially-designed sounding rocket experiment. We show that collisionless beam-plasma interactions (BPI) complement direct impact, leading to appreciable green-line (557.7 nm) emissions in the F region. In the E region, BPI develops near the entry in the valley, resulting in a narrow layer of strongly-elevated and airglow. Besides, neutralizing electric currents carried by ionospheric electrons in the valley can become unstable or even insufficient to compensate the beam current. Developing plasma waves inhibit neutralizing currents. In the extreme case, the beam might be locked in the valley (the 'virtual cathode'). In addition to optical observations, these effects can also be observed by radiophysical means.

Mishin, E. V.↗

Dynamic-Chemical Coupling of the Upper Troposphere and Lower Stratosphere Region

The importance of the interaction of chemistry and dynamics in the upper troposphere and lower stratosphere for chemical species like ozone is investigated using two chemistry-climate models. Species emitted in the upper troposphere, like NOx (=NO+NO2) by lightning or aircraft, have the chance to be transported into the lowermost stratosphere. Trajectory calculations suggest that the main transport pathway runs via the Inter Tropical Convergence Zone, across the tropical tropopause and then to higher latitudes, i.e. into the lowermost stratosphere. Longer lifetimes of NOx in the lower stratosphere yield an accumulation of NO. there, which feeds back on upper troposphere chemistry. This effect has been estimated for lightning NO. emissions and reveals a contribution of at least 25% to 40% to the total northern hemisphere mid-latitude lightning increase of either NOx and ozone.

Grewe, Volker↗

Perspectives on Climate Effects on Agriculture: The International Efforts of AgMIP in Sub-Saharan Africa

Agriculture in Sub-Saharan Africa (SSA) is experiencing climate change-related effects that call for integrated regional assessments, yet capacity for these assessments has been low. The Agricultural Model Intercomparison and Improvement Project (AgMIP) is advancing research on integrated regional assessments of climate change that include climate, crop, and economic modeling and analysis. Through AgMIP, regional integrated assessments are increasingly gaining momentum in SSA, and multi-institutional regional research teams (RRTs) centered in East, West, and Southern· Africa are generating new information on climate change impacts and adaptation in selected agricultural systems. The research in Africa is organized into four RRTs and a coordination team. Each of the RRTs in SSA is composed of scientists from the Consultative Group of International Agricultural Research (CGIAR) institutions, National Agriculture Research institutes (NARs), and universities consisting of experts in crop and economic modeling, climate, and information technology. Stakeholder involvement to inform specific agricultural systems to be evaluated, key outputs, and the representative agricultural pathways (RAPs), is undertaken at two levels: regional and national, in order to contribute to decision making at these levels. Capacity building for integrated assessment (lA) is a key component that is undertaken continuously through interaction with experts in regional and SSA-wide workshops, and through joint creation of tools. Many students and research affiliates have been identified and entrained as part of capacity building in IA. Bi-monthly updates on scholarly publications in climate change in Africa also serve as a vehicle for knowledge-sharing. With 60 scientists already trained and actively engaged in IA and over 80 getting monthly briefs on the latest information on climate change, a climate-informed community of experts is gradually taking shape in SSA. (See Part 2, Appendices 3-5 in this volume for AgMIP Regional Workshop reports.)

Kihara, Job↗

The Observed and Projected Changes of Global Monsoons: Current Status and Future Perspectives

The global monsoon system, encompassing the Asian-Australian, African, and American monsoons, sustains two-thirds of the world’s population by regulating water resources and agriculture. Monsoon anomalies pose severe risks, including floods and droughts. Recent research associated with the implementation of the Global Monsoons Model Intercomparison Project under the umbrella of CMIP6 has advanced our understanding of its historical variability and driving mechanisms. Observational data reveal a 20th-century shift: increased rainfall pre-1950s, followed by aridification and partial recovery post-1980s, driven by both internal variability (e.g., Atlantic Multidecadal Oscillation) and external forcings (greenhouse gases, aerosols), while ENSO drives interannual variability through ocean-atmosphere interactions. Future projections under greenhouse forcing suggest long-term monsoon intensification, though regional disparities and model uncertainties persist. Models indicate robust trends but struggle to quantify extremes, where thermodynamic effects (warming-induced moisture rise) uniformly boost heavy rainfall, while dynamical shifts (circulation changes) create spatial heterogeneity. Volcanic eruptions and proposed solar radiation modification (SRM) further complicate predictions: tropical eruptions suppress monsoons, whereas high-latitude events alter cross-equatorial flows, highlighting unresolved feedbacks. The emergent constraint approach is booming in terms of correcting future projections and reducing uncertainty with respect to the global monsoons. Critical challenges remain. Model biases and sparse 20th-century observational data hinder accurate attribution. The interplay between natural variability and anthropogenic forcings, along with nonlinear extreme precipitation risks under warming, demands deeper mechanistic insights. Additionally, SRM’s regional impacts and hemispheric monsoon interactions require systematic evaluation. Addressing these gaps necessitates enhanced observational networks, refined climate models, and interdisciplinary efforts to disentangle multiscale drivers, ultimately improving resilience strategies for monsoon-dependent regions.

climate extreme events↗

Dark Matter implications of DAMA/LIBRA-phase2 results

Recently, the DAMA/LIBRA collaboration released updated results from their search for the annual modulation signal from Dark Matter (DM) scattering in the detector. Besides approximately doubling the exposure of the DAMA/LIBRA data set, the updated photomultiplier tubes of the experiment allow a lower recoil energy threshold of 1 keV electron equivalent compared to the previous threshold of 2 keV electron equivalent. We study the compatibility of the observed modulation signal with DM scattering. Due to a conspiracy of multiple effects, the new data at low recoil energies is very powerful for testing the DM hypothesis. We find that canonical (isospin conserving) spin-independent DM-nucleon interactions are no longer a good fit to the observed modulation signal in the standard halo model. The canonical spin-independent case is disfavored by the new data, with best fit points of a DM mass of ~ 8 GeV , disfavored by 5.2 σ , or a mass of ~ 54 GeV , disfavored by 2.5 σ . Allowing for isospin violating spin independent interactions, we find a region with a good fit to the data with suppressed effective couplings to iodine for DM masses of ~ 10 GeV . We also consider spin-dependent DM-nucleon interactions, which yield good fits for similar DM masses of ~ 10 GeV or ~ 45 GeV .

79 ASTRONOMY AND ASTROPHYSICS↗

A database of aerothermal measurements in hypersonic flow for CFD validation

This paper presents an experimental database selected and compiled from aerothermal measurements obtained on basic model configurations on which fundamental flow phenomena could be most easily examined. The experimental studies were conducted in hypersonic flows in 48-inch, 96-inch, and 6-foot shock tunnels. A special computer program was constructed to provide easy access to the measurements in the database as well as the means to plot the measurements and compare them with imported data. The database contains tabulations of model configurations, freestream conditions, and measurements of heat transfer, pressure, and skin friction for each of the studies selected for inclusion. The first segment contains measurements in laminar flow emphasizing shock-wave boundary-layer interaction. In the second segment, measurements in transitional flows over flat plates and cones are given. The third segment comprises measurements in regions of shock-wave/turbulent-boundary-layer interactions. Studies of the effects of surface roughness of nosetips and conical afterbodies are presented in the fourth segment of the database. Detailed measurements in regions of shock/shock boundary layer interaction are contained in the fifth segment. Measurements in regions of wall jet and transpiration cooling are presented in the final two segments.

Holden, M. S.↗

Global burned area increasingly explained by climate change

Fire behaviour is changing in many regions worldwide. However, nonlinear interactions between fire weather, fuel, land use, management and ignitions have impeded formal attribution of global burned area changes. Here, in this work, we demonstrate that climate change increasingly explains regional burned area patterns, using an ensemble of global fire models. The simulations show that climate change increased global burned area by 15.8% (95% confidence interval (CI) [13.1–18.7]) for 2003–2019 and increased the probability of experiencing months with above-average global burned area by 22% (95% CI [18–26]). In contrast, other human forcings contributed to lowering burned area by 19.1% (95% CI [21.9–15.8]) over the same period. Moreover, the contribution of climate change to burned area increased by 0.22% (95% CI [0.22–0.24]) per year globally, with the largest increase in central Australia. Our results highlight the importance of immediate, drastic and sustained GHG emission reductions along with landscape and fire management strategies to stabilize fire impacts on lives, livelihoods and ecosystems.

54 ENVIRONMENTAL SCIENCES↗

Reciprocal insulation analysis of Hi-C data shows that TADs represent a functionally but not structurally privileged scale in the hierarchical folding of chromosomes

Understanding how regulatory sequences interact in the context of chromosomal architecture is a central challenge in biology. Chromosome conformation capture revealed that mammalian chromosomes possess a rich hierarchy of structural layers, from multi-megabase compartments to sub-megabase topologically associating domains (TADs) and sub-TAD contact domains. TADs appear to act as regulatory microenvironments by constraining and segregating regulatory interactions across discrete chromosomal regions. However, it is unclear whether other (or all) folding layers share similar properties, or rather TADs constitute a privileged folding scale with maximal impact on the organization of regulatory interactions. Here, we present a novel algorithm named CaTCH that identifies hierarchical trees of chromosomal domains in Hi-C maps, stratified through their reciprocal physical insulation, which is a single and biologically relevant parameter. By applying CaTCH to published Hi-C data sets, we show that previously reported folding layers appear at different insulation levels. We demonstrate that although no structurally privileged folding level exists, TADs emerge as a functionally privileged scale defined by maximal boundary enrichment in CTCF and maximal cell-type conservation. By measuring transcriptional output in embryonic stem cells and neural precursor cells, we show that the likelihood that genes in a domain are coregulated during differentiation is also maximized at the scale of TADs. Finally, we observe that regulatory sequences occur at genomic locations corresponding to optimized mutual interactions at the same scale. Our analysis suggests that the architectural functionality of TADs arises from the interplay between their ability to partition interactions and the specific genomic position of regulatory sequences.

Biochemistry & Molecular Biology↗