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At least 1,261 records · Page 70

ShadeLab/PAPER_Howe_2023_switchgrass_MetaT

The raw data (metagenomes and metatranscriptomes) for this study are available in the Joint Genomes Institute Genome Portal (https://genome.jgi.doe.gov/portal/ Project ID 503249) with projects designated by year and product type. The MAG genomes analyzed in this paper are available on NCBI, as bioproject PRJNA800073. Plants and microorganisms form beneficial associations. Understanding plant-microbe interactions will inform microbiome management to enhance crop productivity and resilience to stress. Here, we apply a genome-centric approach to identify ecologically important leaf microbiome members on field-grown switchgrass and miscanthus and to quantify their activities for switchgrass over two growing seasons. We integrate metagenome and metatranscriptome sequencing from 192 leaf samples collected over representative time points in crop phenology. We curated 40 medium- and high-quality metagenome-assembled-genomes (MAGs) and focused analysis on seasonal transcript recruitment to them. Classes represented by these focal MAGs (Actinomycetia, Alpha- and Gamma- Proteobacteria, and Bacteroidota) were active and had increases in transcripts for short-chain dehydrogenase, molybdopterin oxidoreductase, and polyketide cyclase in the late season. The majority of MAGs had activated stress-associated pathways, including trehalose metabolism, indole acetic acid degradation, betaine biosynthesis, and reactive oxygen species degradation, suggesting direct engagement with the host environment. We also detected seasonally activated biosynthetic pathways for terpenes (carotenoids and isoprenoids) and for various non-ribosomal peptide pathways that were poorly annotated. Overall, this study overcame laboratory and bioinformatic challenges associated with field-based leaf metatranscriptome analysis to inform both general and likely specialized activities of these phyllosphere populations. These activities collectively support that leaf-associated bacterial populations are seasonally dynamic, responsive to host cues, and interactively engage in feedback with the plant. This analysis represented quality filtering of metagenomes and metatranscriptomes (data-preparation folder), metagenome assemblies (metagenome-assembly folder) and metagenome-assembled genome binning, curation, refinement, annotation (mag-evaluation folder). Abundances of sequencing libraries were calculated based on reads mapped (mapping folder). Additionallly, analysis of our annotated results are also included (analysis folder).

Howe, Adina↗

Challenges and strategies for probing the composite interface of PEM electrolyzers and fuel cells using operando AP-XPS

Left: cross-section schematic of a membrane electrode assembly, the working electrode changing state with applied potential. Center: the operando cell design that enables snapshot data acquisition during trajectory movement. Right: resulting spectra. Understanding the surface chemistry of electrocatalyst systems under operando conditions is central to revealing the electrocatalytic cell's working mechanisms. Determination of these catalytic processes on a molecular scale and the involved components is fundamental to streamlining material design for energy conversion and storage applications. X-ray photoelectron spectroscopy (XPS) is an established technique used to study the chemical and electronic states of materials. While the surface sensitivity of XPS is typically high, use of tender X-ray energies and technical advancements have allowed for the direct probing of solid–vapor and solid–liquid interfaces. However, protocols and documentation of experimental considerations for operando XPS probing of working electrolyzers and fuel cells remain scarce. Herein, we report an approach for the study of working polymer electrolyte membrane (PEM) electrolysis cells using ambient pressure X-ray photoelectron spectroscopy (AP-XPS). This approach directly probes the composite electrode surface on the membrane electrode assembly (MEA) in 100% relative humidity to establish a meaningful liquid layer for electrocatalysis. We carry out a systematic investigation from the cell constituent components to a fully assembled working operando electrolytic system and establish a method for AP-XPS study of the complex composite MEA, providing recommendations for data acquisition and component analysis.

Hamlyn, Rebecca↗

Graphical analysis of Mars vehicle assembly

An analysis was performed to support the production of a computer graphics videotape of the assembly of an interplanetary vehicle at a man-tended transportation node, co-orbiting with Space Station Freedom. Using data provided by the Transportation Node Integration Agent of the Lunar-Mars Exploration Office, a workable design of the transportation node was developed. Kinematic manipulator simulation tools were used to perform the operations necessary to complete the assembly task. Results of this analysis are documented in the aforementioned video.

Lewis, Keven W.↗

Power, Avionics and Software - Phase 1.0:

This report describes Power, Avionics and Software (PAS) 1.0 subsystem integration testing and test results that occurred in August and September of 2013. This report covers the capabilities of each PAS assembly to meet integration test objectives for non-safety critical, non-flight, non-human-rated hardware and software development. This test report is the outcome of the first integration of the PAS subsystem and is meant to provide data for subsequent designs, development and testing of the future PAS subsystems. The two main objectives were to assess the ability of the PAS assemblies to exchange messages and to perform audio testing of both inbound and outbound channels. This report describes each test performed, defines the test, the data, and provides conclusions and recommendations.

Communiocations↗

Pitfalls and Precautions When Using Predicted Failure Data for Quantitative Analysis of Safety Risk for Human Rated Launch Vehicles

Launch vehicle reliability analysis is largely dependent upon using predicted failure rates from data sources such as MIL-HDBK-217F. Reliability prediction methodologies based on component data do not take into account system integration risks such as those attributable to manufacturing and assembly. These sources often dominate component level risk. While consequence of failure is often understood, using predicted values in a risk model to estimate the probability of occurrence may underestimate the actual risk. Managers and decision makers use the probability of occurrence to influence the determination whether to accept the risk or require a design modification. The actual risk threshold for acceptance may not be fully understood due to the absence of system level test data or operational data. This paper will establish a method and approach to identify the pitfalls and precautions of accepting risk based solely upon predicted failure data. This approach will provide a set of guidelines that may be useful to arrive at a more realistic quantification of risk prior to acceptance by a program.

Hatfield, Glen S.↗

Application of statistical distribution theory to launch-on-time for space construction logistic support

The ability to launch-on-time and to send payloads into space has progressed dramatically since the days of the earliest missile and space programs. Causes for delay during launch, i.e., unplanned 'holds', are attributable to several sources: weather, range activities, vehicle conditions, human performance, etc. Recent developments in space program, particularly the need for highly reliable logistic support of space construction and the subsequent planned operation of space stations, large unmanned space structures, lunar and Mars bases, and the necessity of providing 'guaranteed' commercial launches have placed increased emphasis on understanding and mastering every aspect of launch vehicle operations. The Center of Space Construction has acquired historical launch vehicle data and is applying these data to the analysis of space launch vehicle logistic support of space construction. This analysis will include development of a better understanding of launch-on-time capability and simulation of required support systems for vehicle assembly and launch which are necessary to support national space program construction schedules. In this paper, the author presents actual launch data on unscheduled 'hold' distributions of various launch vehicles. The data have been supplied by industrial associate companies of the Center for Space Construction. The paper seeks to determine suitable probability models which describe these historical data and that can be used for several purposes such as: inputs to broader simulations of launch vehicle logistic space construction support processes and the determination of which launch operations sources cause the majority of the unscheduled 'holds', and hence to suggest changes which might improve launch-on-time. In particular, the paper investigates the ability of a compound distribution probability model to fit actual data, versus alternative models, and recommends the most productive avenues for future statistical work.

Morgenthaler, George W.↗

Space radiation studies

Two Active Radiation Dosimeters (ARD's) flown on Spacelab 1, performed without fault and were returned to Space Science Laboratory, MSFC for recalibration. During the flight, performance was monitored at the Huntsville Operations Center (HOSC). Despite some problems with the Shuttle data system handling the verification flight instrumentation (VFI), it was established that the ARD's were operating normally. Postflight calibrations of both units determined that sensitivities were essentially unchanged from preflight values. Flight tapes were received for approx. 60 percent of the flight and it appears that this is the total available. The data was analyzed in collaboration with Space Science Laboratory, MSFC. Also, the Nuclear Radiation Monitor (NRM) was assembled and tested at MSFC. Support was rendered in the areas of materials control and parts were supplied for the supplementary heaters, dome gas-venting device and photomultiplier tube housing. Performance characteristics of some flight-space photomultipliers were measured. The NRM was flown on a balloon-borne test flight and subsequently performed without fault on Spacelab-2. This data was analyzed and published.

Source record↗

Augmented Method to Improve Thermal Data for the Figure Drift Thermal Distortion Predictions of the JWST OTIS Cryogenic Vacuum Test

The JWST Optical Telescope Element (OTE) assembly is the largest optically stable infrared-optimized telescope currently being manufactured and assembled, and is scheduled for launch in 2018. The JWST OTE, including the 18 segment primary mirror, secondary mirror, and the Aft Optics Subsystem (AOS) are designed to be passively cooled and operate near 45K. These optical elements are supported by a complex composite backplane structure. As a part of the structural distortion model validation efforts, a series of tests are planned during the cryogenic vacuum test of the fully integrated flight hardware at NASA JSC Chamber A. The successful ends to the thermal-distortion phases are heavily dependent on the accurate temperature knowledge of the OTE structural members. However, the current temperature sensor allocations during the cryo-vac test may not have sufficient fidelity to provide accurate knowledge of the temperature distributions within the composite structure. A method based on an inverse distance relationship among the sensors and thermal model nodes was developed to improve the thermal data provided for the nanometer scale WaveFront Error (WFE) predictions. The Linear Distance Weighted Interpolation (LDWI) method was developed to augment the thermal model predictions based on the sparse sensor information. This paper will encompass the development of the LDWI method using the test data from the earlier pathfinder cryo-vac tests, and the results of the notional and as tested WFE predictions from the structural finite element model cases to characterize the accuracies of this LDWI method.

Thermal Modeling↗

Nanoengineering of Complex Materials

We are primarily interested in two important biomimetic principles, namely, self-assembly based on supramolecular chemistry and the use of these structures to template in organic phases as observed in biomineralization. The projects proposed are inspired by some of our achievements in the previous funding period described above, and also by preliminary data gathered recently which we describe below. In addition to our broad objective of acquiring knowledge in supramolecular self-assembly and templating of organic–inorganic hybrid materials, we also propose here work on biomolecular structures based on DNA, peptide nucleic acids, and peptides which can serve as models for artificial materials based on biomimetic principles. The proposed work is divided into three sections, supramolecular systems, hybrid systems, and biomolecular and biological systems. In terms of functions, we are using systems that have relevance to solar cells, catalysis, dynamic/active materials, and ferroelectrics.

36 MATERIALS SCIENCE↗

Compiling a Comprehensive EVA Training Dataset for NASA Astronauts

Training for a spacewalk or extravehicular activity (EVA) is considered a hazardous duty for NASA astronauts. This places astronauts at risk for decompression sickness as well as various musculoskeletal disorders from working in the spacesuit. As a result, the operational and research communities over the years have requested access to EVA training data to supplement their studies. The purpose of this paper is to document the comprehensive EVA training data set that was compiled from multiple sources by the Lifetime Surveillance of Astronaut Health (LSAH) epidemiologists to investigate musculoskeletal injuries. The EVA training dataset does not contain any medical data, rather it only documents when EVA training was performed, by whom and other details about the session. The first activities practicing EVA maneuvers in water were performed at the Neutral Buoyancy Simulator (NBS) at the Marshall Spaceflight Center in Huntsville, Alabama. This facility opened in 1967 and was used for EVA training until the early Space Shuttle program days. Although several photographs show astronauts performing EVA training in the NBS, records detailing who performed the training and the frequency of training are unavailable. Paper training records were stored within the NBS after it was designated as a National Historic Landmark in 1985 and closed in 1997, but significant resources would be needed to identify and secure these records, and at this time LSAH has not pursued acquisition of these early training records. Training in the NBS decreased when the Johnson Space Center in Houston, Texas, opened the Weightless Environment Training Facility (WETF) in 1980. Early training records from the WETF consist of 11 hand-written dive logbooks compiled by individual workers that were digitized at the request of LSAH. The WETF was integral in the training for Space Shuttle EVAs until its closure in 1998. The Neutral Buoyancy Laboratory (NBL) at the Sonny Carter Training Facility near JSC opened in March 1997 and is the current site for US EVA training. Other space agencies also have used water to simulate weightlessness and train for EVAs. Russia has a training facility similar to the NBL named the Hydro Lab. The Hydro Lab began operations at the Gagarin Cosmonaut Training Center (GCTC) in 1980 and has been used extensively to the present. Although a majority of training in the Hydro Lab uses the Russian Orlan suit, a small number of sessions have been conducted using a NASA suit. The Japanese Weightlessness Environment Test System (WETS) went into service at the Tsukuba Space Center in 1997 but was closed in 2011 due to extensive earthquake damage. Several sessions were performed using a NASA suit, but these sessions were short and considered "development" runs. LSAH has assembled records from the WETF, NBL and Hydro Lab. Recording of the EVA training data has changed considerably from 1967 to present. The goal of early record keeping was to track use of hardware components, and the person involved was treated as a suited operator, not as a focus of interest. Records from the past two decades are fairly precise with the person, date, suit type and size noted. On occasion the length of the session was listed, but this data is not included on all records. Records were merged from data sources and extensive cleaning of the records was required since the multiple sources frequently overlapped and duplicated records. To date the LSAH EVA training dataset includes over 12,500 EVA training sessions performed by NASA astronauts since 1981. The following variables are included for most records: Name, Sex, Event date, Event name, HUT type, HUT size, Facility, and Estimated run time. For a smaller subset of records, the following variables are available: Actual run time, Time inverted, and the suit components Waist bearing type, Shoulder harness, Shoulder pads, and Teflon inserts. The LSAH dataset is currently the most complete resource for data regarding EVA training sessions performed by NASA astronauts. However, it is not 100 percent complete since the WETS (Japan) and NBS (Marshall) training facility data were not included. This dataset has been compiled by LSAH to study the relationship of EVA training to musculoskeletal injuries but has many other non-medical applications. This dataset can be provided to other groups in order to respond to program and research questions with appropriate board approvals.

Laughlin, M. S.↗

High-Rate Ka-Band Modulator for the NISAR Mission

In order to meet ever-increasing data return requirements, more satellites are using the near-Earth Ka-band (25.5 – 27.0 GHz) to achieve higher downlink rates. The paper discusses the Universal Space Transponder - Ka-band Modulator (UST-KaM) developed at the NASA Jet Propulsion Laboratory for the NASA-ISRO SAR (NISAR) mission, which is capable of transmitting up to 1.74 Gbps with 7/8 LDPC encoding. The UST-KaM utilizes OQPSK with both baseband and RF filtering to contain the 1 Gsps transmission spectrum within the 1.5 GHz Ka-band, even with the use of an external, saturated amplifier. Due to the high data rates involved, several technical hurdles were overcome in both the digital and RF designs. The UST-KaM is a software defined radio with two digital circuit board assemblies: a low speed housekeeper board for commanding and telemetry, and a high-rate signal processing board known as the Signal Processing Module (SPM). The SPM receives data from the spacecraft via a SERDES interface at up to 2 Gbps, processes and encodes the data using a Xilinx Virtex-5 FPGA, and produces 1 Gsps OQPSK I and Q waveforms via synchronized, multiplexed DACs. The RF Electronics in the UST-KaM employ a heterodyne architecture in which the I/Q digital waveforms are filtered and then up-converted using a sub-harmonic IQ mixer. The LO of the converter, which is included in the exciter assembly, is at 13.125GHz, and the RF output is a 26.25GHz carrier which is modulated with the OQPSK waveforms. The output of the mixer is then filtered using low loss quartz thinfilm edge coupled Chebyshev filters and amplified through a series of low gain Ka-Band amplifiers. The exciter assembly also has a 2GHz, low-phase-noise, PLL synthesizer to supply the clock to the DACs for the high rate digital waveforms.

Spurgers, Carl↗

Report on technical development in ANL for innovative creep testing and measurement

This report summarizes a research effort undertaken by Argonne National Laboratory to accelerate the development of creep data package for ASME code qualification. Progress on the fabrication of a 3-sample load train and the application of a direct current potential drop (DCPD) technique to measure large creep strains are reported. Specifically: (1) The 3-sample load train, with three sets of Linear Variable Differential Transformers (LVDT), has been fabricated and assembled. (2) A DCPD method for creep-strain measurement up to 50% has been demonstrated. The DCPD data matches very well to LVDT results, suggesting its potential application in future creep testing. The technical developments contribute towards shortening the time needed to generate a creep data package for an ASME code case of the laser powder bed fusion 316H stainless steel, an effort under the US Department of Energy’s Advanced Materials and Manufacturing Technologies (AMMT) program.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Dual frequency feed system for the CTS communications link characterization experiment

The developing, testing and installation of a dual frequency feed assembly were described. The feed has been designed to receive signals in the frequency range 11.7 to 12.2 GHz and transmit signals in the frequency range 14.12 GHz plus or minus 250 MHz. Complete performance data of the feed alone and installed in the 15 foot antenna is included herein. Drawings and descriptive information of the feed assembly are also given.

Gill, G. J.↗

Landsat Data Continuity Mission Expected Instrument Performance

The Landsat Data Continuity Mission (LDCM) is scheduled for a December 2012 launch date. LDCM is being managed by an interagency partnership between NASA and the U.S. Geological Survey (USGS). In order to provide the necessary spectral coverage of the visible through shortwave-infrared (SWIR) and the thermal-infrared (TIR), the satellite will carry two sensors. The Operational Land Imager (OLI) will collect data for nine visible to shortwave spectral bands with a spatial resolution of 30 m (with a 15 m panchromatic band). The Thermal Infrared Sensor (TIRS) will collect coincident image data for two TIR bands with a spatial resolution of 100 m. The OLI is fully assembled and tested and has been shipped by it's manufacturer, Ball Aerospace and Technology Corporation, to the Orbital Sciences Corporation (Orbital) facility where it is being integrated onto the LDCM spacecraft. Pre-launch testing indicates that OLI will meet all performance specification with margin. TIRS is in development at the NASA Goddard Space F!ight Center (GSFC) and is in final testing before shipping to the Orbital facility in January, 2012. The presentation will describe the LDCM satellite instrument systems, present pre-launch performance data for OLI and TIRS, and present simulated images to highlight notable features and expected imaging performance.

Dabney, Philip W.↗

The Zooplankton International Geospatial (ZIG) dataset: A global repository of spatiotemporal freshwater zooplankton community composition data to support ecological research

Zooplankton play critical roles in aquatic ecosystem function and food webs. Nevertheless, global syntheses of their abundance and community dynamics are challenging due to methodological differences across monitoring programs, taxonomic inconsistencies, and a lack of standardized metadata. To reconcile these challenges, we assembled, curated, validated, and harmonized the Zooplankton International Geospatial (ZIG) dataset, which includes co-located and contemporaneous zooplankton, water chemistry, and limnological data from 307 lakes and reservoirs. ZIG includes waterbodies from each major lake thermal region and range in size from 0.8-2,805,8600 hectares. Temporal coverage for individual waterbodies ranges between 1-60 years of data (median = 4 years) with sampling from once annually to weekly. ZIG is publicly available and can be used to understand freshwater biodiversity change and its drivers at unprecedented scales, and we consider it to be a cornerstone for future investigations of freshwater biology, chemistry, and ecology.

Figary, Stephanie [Cornell University, Ithaca, NY]↗

Power User Interface

Power User Interface 5.0 (PUI) is a system of middleware, written for expert users in the Earth-science community, PUI enables expedited ordering of data granules on the basis of specific granule-identifying information that the users already know or can assemble. PUI also enables expert users to perform quick searches for orderablegranule information for use in preparing orders. PUI 5.0 is available in two versions (note: PUI 6.0 has command-line mode only): a Web-based application program and a UNIX command-line- mode client program. Both versions include modules that perform data-granule-ordering functions in conjunction with external systems. The Web-based version works with Earth Observing System Clearing House (ECHO) metadata catalog and order-entry services and with an open-source order-service broker server component, called the Mercury Shopping Cart, that is provided separately by Oak Ridge National Laboratory through the Department of Energy. The command-line version works with the ECHO metadata and order-entry process service. Both versions of PUI ultimately use ECHO to process an order to be sent to a data provider. Ordered data are provided through means outside the PUI software system.

Pfister, Robin↗

Sterols are required for the coordinated assembly of lipid droplets in developing seeds

Abstract Lipid droplets (LDs) are intracellular organelles critical for energy storage and lipid metabolism. They are typically composed of an oil core coated by a monolayer of phospholipids and proteins such as oleosins. The mechanistic details of LD biogenesis remain poorly defined. However, emerging evidence suggest that their formation is a spatiotemporally regulated process, occurring at specific sites of the endoplasmic reticulum defined by a specific set of lipids and proteins. Here, we show that sterols are required for formation of oleosin-coated LDs in Arabidopsis. Analysis of sterol pathway mutants revealed that deficiency in several ∆ 5 -sterols accounts for the phenotype. Importantly, mutants deficient in these sterols also display reduced LD number, increased LD size and reduced oil content in seeds. Collectively, our data reveal a role of sterols in coordinating the synthesis of oil and oleosins and their assembly into LDs, highlighting the importance of membrane lipids in regulating LD biogenesis.

59 BASIC BIOLOGICAL SCIENCES↗