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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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In this study, we present a method for acquiring and characterizing novel microbial consortia that regulates methanogens and methanotrophs through selective cultivation and metagenomic analysis of indigenous microorganisms in the environment. In addition, we present the work performed as part of this project to model the pathways that act as limiting factors in microbial methane metabolism based on a carbon cycle model. In this report, we describe the methods for selective cultivation of methane-metabolism-related microorganisms from environmental samples, the method for monitoring their methane consumption performance, and the method and results for verifying their functions using quantitative PCR and metagenomics techniques. The microbial consortia containing methanotrophs were obtained through selective cultivation and molecular biological verification, and their methane consumption performance was evaluated. In addition, the potential of the existence of bacteriophages interacting with methane metabolism-related microorganisms was identified through metagenomic sequencing.
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We fulfilled all original three aims of the proposal. Following the earlier release (during the first phase of the project at Montana) of software that identifies and fills gaps in the annotation of metabolic proteins within bacterial genomes, we have nearly completed a second gap-filling tool that improves accuracy and explainability. We completed software for alignment-based annotation of protein coding DNA, allowing for coding frameshifts caused by sequencing error. Finally, we completed a neural embedding model for identifying similarities between protein sequences based on amino-wise latent vectors.
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Final Award Technical Report
Crop protection presentation for the Algal BBB conference.
Poster for the inaugural Advancing Mechanistic Microbial Science Using Fabricated Ecosystems Conference ("EcoFAB 2025 Conference") at the Asilomar Hotel and Conference Grounds in Pacific Grove, CA on August 6-9, 2025.
Abiotic stresses like heat and drought pose a major threat to forest ecosystems and are anticipated to increase due to anthropogenic climate change. One mechanism by which plants cope with stress
Tannins are plant secondary metabolites that bind organic carbon (C) and nitrogen (N), potentially altering substrate bioavailability for enteric fermentation in ruminants. This interaction may reduce greenhouse gas (GHG) emissions and influence nitrogen partitioning. Given tannins' resistance to ruminal degradation and persistence through the gastrointestinal tract, this study investigated the effects of a tannin-based feed additive on fecal microbial diversity, fecal chemical composition, and GHG emissions. Twenty-four early- to mid-lactation dairy cows were randomized to receive either a tannin-based feed additive (TRT; containing condensed and hydrolyzable tannins from Schinopsis quebracho-colorado [Schltdl.]) or a control diet (CON) for 64 days. Cows were blocked by parity, dry matter intake, milk yield, body weight, and days in milk. Fecal samples were collected on days 0, 16, 32, and 64 and analyzed using 16S rRNA gene amplicon sequencing. Fecal C, N, and indole-3-lactate were measured, and GHG emissions (N2O, CH4, CO2) were assessed via 14-day laboratory incubation. A total of 1,538 amplicon sequence variants were identified, with Firmicutes as the dominant phylum. Fecal phylogenetic diversity showed a significant treatment × day interaction (p < 0.01), with TRT cows exhibiting reduced microbial diversity from day 16 to 64. Fecal C and N concentrations were significantly lower (p < 0.01) in TRT cows on day 16, while indole-3-lactate levels were higher on day 64 (p = 0.02). GHG emissions did not differ significantly between treatments. The tannin-based feed additive influenced fecal microbial community structure and select chemical parameters but did not significantly affect GHG emissions from feces. These findings suggest that dietary tannins may modulate gut microbial ecology with minimal impact on downstream manure-related emissions.
The International Space Station (ISS) as an integral component for the discovery and development of advanced robotics, materials, communications, medicine, agriculture, and environmental science due to it currently being the world's only microgravity laboratory of its kind. Because the ISS is a contained system with confined quarters, much research has been undertaken to assess and diminish the number of microbiological risks associated with astronauts inhabiting the station for extended periods of time. Notable microbiological risk factors include drinking water, air, and food. As an avenue for both mental/emotional respite and a source of fresh produce for astronauts, a vegetable production system has been employed on the ISS. In order to understand the microbial risks involved with a "pick and eat" vegetable system on the International Space Station (ISS), this study aims to compare microbial differences between sanitized and unsanitized seeds by tracking and identifying seedborne microbes throughout the development of red romaine lettuce (Lactuca sativa)-a plant species that has already been grown on the ISS.
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As the Artemis mission advances to the Moon, women and men will be venturing into dangerous environments and facing unique hazards. In addition to living in closed environments, the deep space environment adds high levels of radiation, the absence of Earth’s magnetic field, and altered gravity. These elements present new challenges to long duration space flight that need to be overcome. To meet these challenges we have to understand:
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