Jet clustering with a scale-invariant filtered tree: A new algorithm for the substructure era
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A measurement of a primordial non-Gaussianity (PNG) signal through late- or early-Universe probes has the potential to transform our understanding of the physics of the primordial Universe. While large-scale structure observables in principle contain vital information, interpreting these measurements is challenging due to poorly understood astrophysical effects. Luckily, N-body simulations, such as the abacuspng set presented in this study, consisting of 9 boxes, each of size L box = 2 Gpc/h and particle mass of 1.01 × 10 10 M ⊙ /h, provide a viable path forward. As validation, we find good agreement between the simulations and our expectations from one-loop perturbation theory (PT) and the "separate universe" method for the matter bispectrum, matter power spectrum and the halo bias parameter associated with PNG, b φ . As a science application, here we investigate the link between halo assembly bias and b φ for halo properties known to play a vital role in accurately predicting galaxy clustering: concentration, shear (environment), and accretion rate. We find a strong response for all three parameters, suggesting that the connection between b φ and the assembly history of halos needs to be taken into account by future PNG analyses. We further perform the first study of the b φ parameter from fits to early DESI data of the luminous red galaxy (LRG) and quasistellar object (QSO) samples and comment on the effect on f NL constraints for the allowed galaxy-halo models (note that σ[f NL ]∝ $\frac{σ[b_φ]}{b_φ}$). We find that the error on f NL is 15, 8, 7 for the LRGs at z = 0.5 and z = 0.8 and QSOs at z = 1.4, respectively, suggesting that a thorough understanding of galaxy assembly bias is warranted so as to perform robust high-precision analysis of local-type PNG with future surveys.
Peculiar velocities of galaxies and halos can be reconstructed from their spatial distribution alone. This technique is analogous to the baryon acoustic oscillations reconstruction, using the continuity equation to connect density and velocity fields. The resulting reconstructed velocities can be used to measure imprints of galaxy velocities on the cosmic microwave background like the kinematic Sunyaev-Zel’dovich effect or the moving lens effect. As the precision of these measurements increases, characterizing the performance of the velocity reconstruction becomes crucial to allow unbiased and statistically optimal inference. In this paper, we quantify the relevant performance metrics: the variance of the reconstructed velocities and their correlation coefficient with the true velocities. We show that the relevant velocities to reconstruct for kSZ and moving lens are actually the halo—rather than galaxy—velocities. We quantify the impact of redshift-space distortions, photometric redshift errors, satellite galaxy fraction, incorrect cosmological parameter assumptions and smoothing scale on the reconstruction performance. Here, we also investigate hybrid reconstruction methods, where velocities inferred from spectroscopic samples are evaluated at the positions of denser photometric samples. We find that using exclusively the photometric sample is better than performing a hybrid analysis. The 2 Gpc/ℎ length simulations from abacussummit with realistic galaxy samples for DESI and Rubin LSST allow us to perform this analysis in a controlled setting. In the companion paper [B. Hadzhiyska, S. Ferraro, B. Ried Guachalla, and E. Schaan, companion paper, Phys. Rev. D 109, 103534 (2024).], we further include the effects of evolution along the light cone and give realistic performance estimates for DESI luminous red galaxies, emission line galaxies, and Rubin LSST-like samples.
Reconstructing the galaxy peculiar velocity field from the distribution of large-scale structure plays an important role in cosmology. On one hand, it gives us an insight into structure formation and gravity; on the other, it allows us to selectively extract the kinetic Sunyaev-Zel’dovich (kSZ) effect from cosmic microwave background maps. In this work, we employ high-accuracy synthetic galaxy catalogs on the light cone to investigate how well we can recover the velocity field when utilizing the three-dimensional spatial distribution of the galaxies in a modern large-scale structure experiment such as the Dark Energy Spectroscopic Instrument (DESI) and the Rubin Observatory Legacy Survey of Space and Time. In particular, we adopt the standard technique used in baryon acoustic oscillation analysis for reconstructing the Zel’dovich displacements of galaxies through the continuity equation, which yields a first-order approximation to their large-scale velocities. We investigate variations in the number density, bias, mask, area, redshift noise, and survey depth, as well as modifications to the settings of the standard reconstruction algorithm. Since our main goal is to provide guidance for planned kSZ analysis between DESI and the Atacama Cosmology Telescope, we apply velocity reconstruction to a faithful representation of DESI spectroscopic and photometric targets. We report the cross-correlation coefficient between the reconstructed and the true velocities along the line of sight. For the DESI Y1 spectroscopic survey, we expect the correlation coefficient to be r ≈ 0.64, while for a photometric survey with δ z /(1+z) = 0.02, as is approximately the case for the Legacy Survey used in the target selection of DESI galaxies, r shrinks by half to r ≈ 0.31. Here, we hope the results in this paper can be used to inform future kSZ stacking studies and other velocity reconstruction analyses planned with the next generation of cosmology experiments.
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Recent progress in the realm of noisy intermediate-scale quantum (NISQ) devices represents an exciting opportunity for many-body physics by introducing new laboratory platforms with unprecedented control and measurement capabilities. We explore the implications of NISQ platforms for many-body physics in a practical sense: we ask which physical phenomena, in the domain of quantum statistical mechanics, they may realize more readily than traditional experimental platforms. While a universal quantum computer can simulate any system, the eponymous noise inherent to NISQ devices practically favors certain simulation tasks over others in the near term. As a particularly well-suited target, we identify discrete time crystals (DTCs), novel nonequilibrium states of matter that break time translation symmetry. These can only be realized in the intrinsically out-of-equilibrium setting of periodically driven quantum systems stabilized by disorder-induced many-body localization. While promising precursors of the DTC have been observed across a variety of experimental platforms—ranging from trapped ions to nitrogen-vacancy centers to NMR crystals—none have all the necessary ingredients for realizing a fully fledged incarnation of this phase, and for detecting its signature long-range spatiotemporal order. We show that a new generation of quantum simulators can be programmed to realize the DTC phase and to experimentally detect its dynamical properties, a task requiring extensive capabilities for programmability, initialization, and readout. Specifically, the architecture of Google’s Sycamore processor is a remarkably close match for the task at hand. We also discuss the effects of environmental decoherence, and how they can be distinguished from ‘internal’ decoherence coming from closed-system thermalization dynamics. Already with existing technology and noise levels, we find that DTC spatiotemporal order would be observable over hundreds of periods, with parametric improvements to come as the hardware advances.
The outskirts of galaxy clusters present a promising avenue for constraining cluster masses in a way that is robust to the impact of baryonic physics. We assess the accuracy to which the cluster infall regions can be used for cluster mass calibration. Building on previous work, we parametrize the velocity distribution 𝑃(𝑣r,𝑣tan|𝑟,𝑀) of dark matter halos on scales 𝑟 ≥ 5ℎ −1 Mpc as the product of the marginalized distribution 𝑃(𝑣 r |𝑟,𝑀) and the conditional distribution 𝑃(𝑣 tan |𝑣 r ,𝑟,𝑀), calibrating the radial and mass dependence of these distributions in numerical simulations. We then project our model along the line of sight to obtain accurate predictions for the distributions of line-of-sight velocities at a given projected radius and cluster mass 𝑃(𝑣 LOS |𝑅,𝑀), which we can observe with spectroscopic survey data. Furthermore, with our model, we forecast that spectra from the Dark Energy Spectroscopic Instrument can constrain cluster masses with subpercent-level precision, comparable to that of stage-IV weak lensing surveys.
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Imagine that we traveled into the future where more than 50% of electricity production is generated by wind and solar. Would you wonder how the grid would operate on an overcast, windless, extremely cold/hot day, where half of its generation fleet may become unavailable?
To maximize the physics reach, the Large Hadron Collider (LHC) plans to increase its instantaneous luminosity to $7.5×10^{34} cm^{-2} s^{-1}$ and deliver $3 - 4 ab^{-1}$ of data at a center-of-mass energy of 14 TeV. To profit from this high-luminosity LHC operation with a pile-up up to 200 inelastic collisions per bunch crossing, performance of the ATLAS detector needs to be maintained and in many systems, improved. The upgraded detector will have an unprecedented output data rate of up to 200 TB/s. Real-time processing of this large data volume in a short time period is extremely challenging. New sets of both front-end and back-end electronics are required for all sub-detectors. The large number of detector channels, huge volumes of input and output data, short time available to process and transmit data, harsh radiation environment, and the need of low power consumption all impose great challenges on the designs of electronic systems.
The Poisson equation has many applications across the broad areas of science and engineering. Most quantum algorithms for the Poisson solver presented so far, either suffer from lack of accuracy and/or are limited to very small sizes of the problem, and thus have no practical usage. Here we present an advanced quantum algorithm for solving the Poisson equation with high accuracy and dynamically tunable problem size. After converting the Poisson equation to the linear systems through the finite difference method, we adopt the Harrow-Hassidim-Lloyd (HHL) algorithm as the basic framework. Particularly, in this work we present an advanced circuit that ensures the accuracy of the solution by implementing non-truncated eigenvalues through eigenvalue amplification as well as by increasing the accuracy of the controlled rotation angular coefficients, which are the critical factors in the HHL algorithm. We show that our algorithm not only increases the accuracy of the solutions, but also composes more practical and scalable circuits by dynamically controlling problem size in the NISQ devices. We present both simulated and experimental results, and discuss the sources of errors. Finally, we conclude that overall results on the quantum hardware are dominated by the error in the CNOT gates.
Recent changes to the principal causes of energy shortage events on the electric grid have necessitated are thinking of paradigms for resource adequacy (RA) assessment and the related topic of procurement of a reliable portfolio. Prior studies have laid out elements of a modern paradigm for these planning activities, but there does not exist a comprehensive overview of the topic spanning academic and gray literature, and the relationship of these suggested paradigms to methods used in industry has also not been surveyed. In this paper we review recent literature establishing best practices for RA assessment and reliable portfolio procurement, and survey current practices used in industry in relation to these best practices. We establish seven key best practices for RA assessment, cover a modern methodology for capacity accreditation, and find that industry practices are not far behind the identified best practices, though some key gaps remain. We also present a suggested agenda for both academic research on the topic and opportunities for advancement in the industry.
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In less than a decade since the first demonstrations of CRISPR genome editing of agronomic genes in several tree species (Zhou et al., 2015; Jia et al., 2016; Ren et al., 2016), this disruptive technology has been deployed for a growing number of traits in both basic and applied research. The precision and efficiency of CRISPR editing allow for the recovery of null mutants in the first generation (Zhou et al., 2015; Elorriaga et al., 2018; Muhr et al., 2018), which is a significant benefit for perennial trees with long generation times. The stability of editing outcomes over multiple years or clonal propagation cycles (Bewg et al., 2022; Chen et al., 2023; Goralogia et al., 2024) is another key advantage since most woody perennials are vegetatively propagated in commercial operations. However, in many countries, gene-edited trees with stably integrated T-DNA face the same regulatory hurdles as traditional transgenics, slowing field trial characterization and the integration of transgenesis with conventional breeding (Boerjan & Strauss, 2024). In an article recently published in New Phytologist, Hoengenaert et al. (2025; doi: 10.1111/nph.20415) demonstrate transgene-free editing in poplar (Populus tremula × alba) that shows promise for wide adoption. The CRISPR-edited, transgene-free canker-resistant citrus (Citrus sinensis) trees (Su et al., 2023) have recently been approved by USDA-APHIS and are exempt from regulation by the US Environmental Protection Agency (EPA) for commercial production. The work by Hoengenaert et al. (2025) suggests a similar path could be followed for purpose-grown plantations for bioenergy, bioproducts, and biomaterials.
A recent trend in modern high-performance computing is the increasing use of hybrid architectures, where the vast majority of performance comes from accelerators. Modern accelerators are based on Graphics Processing Units (GPU) that contain many low power cores that in their aggregate provides an extremely high computation rate. Current and future CPU processors are requiring more explicit parallelism as each successive version of the hardware packs in more cores, and technologies like hyperthreading and vector operations require even more parallel processing to leverage each core’s full potential. As an example, the Frontier supercomputer installed at Oak Ridge National Laboratories recently hit a record breaking 1.1 exaflops1 on the LINPACK HPC benchmark [Shoemaker 2022]. The system contains 37632 AMD MI250x GPUs which requires more than half a billion threads to keep the system fully utilized [Khizeran 2022].VTK-m is a toolkit of scientific visualization algorithms for these emerging processor architectures. VTK-m supports the fine-grained concurrency for data analysis and visualization algorithms required to drive extreme scale computing by providing abstract models for data and execution that can be applied to a variety of algorithms across many different processor architectures.
Modern scientific discovery increasingly requires coordinating distributed facilities and heterogeneous resources, forcing researchers to act as manual workflow coordinators rather than scientists. Advances in AI leading to AI agents show exciting new opportunities that can accelerate scientific discovery by providing intelligence as a component in the ecosystem. However, it is unclear how this new capability would materialize and integrate in the real world. To address this, we propose a conceptual framework where workflows evolve along two dimensions which are intelligence (from static to intelligent) and composition (from single to swarm) to chart an evolutionary path from current workflow management systems to fully autonomous scientific laboratories. With these trajectories in mind, we present an architectural blueprint that can help the community take the next steps towards harnessing the opportunities in autonomous science with the potential for 100x discovery acceleration and transformational scientific workflows.
High-throughput single-cell transcriptomic approaches have revolutionized our view of gene expression at the level of individual cells, providing new insights into their heterogeneity, identities, and functions. Recently, technical challenges to the application of single-cell transcriptomics to plants have been overcome, and many plant organs and tissues have now been subjected to analyses at single-cell resolution. In this review, we describe these studies and their impact on our understanding of the diversity, differentiation, and activities of plant cells. We particularly highlight their impact on plant cell identity, including unprecedented views of cell transitions and definitions of rare and novel cell types. Lastly, we also point out current challenges and future opportunities for the application and analyses of single-cell transcriptomics in plants.