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At least 127 records · Page 7
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

What is (quantitative) system dynamics modeling? Defining characteristics and the opportunities they create

A clear definition of system dynamics modeling can provide shared understanding and clarify the impact of the field. We introduce a set of characteristics that define quantitative system dynamics, selected to capture core philosophy, describe theoretical and practical principles, and apply to historical work but be flexible enough to remain relevant as the field progresses. The defining characteristics are: (1) models are based on causal feedback structure, (2) accumulations and delays are foundational, (3) models are equation-based, (4) concept of time is continuous, and (5) analysis focuses on feedback dynamics. We discuss the implications of these principles and use them to identify research opportunities in which the system dynamics field can advance. These research opportunities include causality, disaggregation, data science and AI, and contributing to scientific advancement. Progress in these areas has the potential to improve both the science and practice of system dynamics.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Do-calculus enables estimation of causal effects in partially observed biomolecular pathways

Abstract Motivation Estimating causal queries, such as changes in protein abundance in response to a perturbation, is a fundamental task in the analysis of biomolecular pathways. The estimation requires experimental measurements on the pathway components. However, in practice many pathway components are left unobserved (latent) because they are either unknown, or difficult to measure. Latent variable models (LVMs) are well-suited for such estimation. Unfortunately, LVM-based estimation of causal queries can be inaccurate when parameters of the latent variables are not uniquely identified, or when the number of latent variables is misspecified. This has limited the use of LVMs for causal inference in biomolecular pathways. Results In this article, we propose a general and practical approach for LVM-based estimation of causal queries. We prove that, despite the challenges above, LVM-based estimators of causal queries are accurate if the queries are identifiable according to Pearl’s do-calculus and describe an algorithm for its estimation. We illustrate the breadth and the practical utility of this approach for estimating causal queries in four synthetic and two experimental case studies, where structures of biomolecular pathways challenge the existing methods for causal query estimation. Availability and implementation The code and the data documenting all the case studies are available at https://github.com/srtaheri/LVMwithDoCalculus. Supplementary information Supplementary data are available at Bioinformatics online.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Enhanced Microseismicity During Production Pumping Cessation at the San Emidio Geothermal Field (Nevada, USA) in December 2016

Abstract Tectonic activity, geothermal fluids, and microseismic events (MSEs) tend to occur in similar locations as a result of spatiotemporal changes in the subsurface stress state. To quantify this association, we analyze data from a dense seismic array deployed at the San Emidio geothermal field, Nevada for 1 week in December 2016 to coincide with a 19.45‐hr shutdown of all injection and production pumping operations. 123 MSEs were detected, of which 101 occurred during the shutdown. The spatial association of the MSEs with the production wells suggests a causal relationship between the production cessation and the MSEs. Here we performed a detailed analysis to investigate reservoir material properties, distribution of seismically activated faults, and local stress state. We determined the hypocenters, magnitudes, and focal mechanisms for the MSEs, P‐wave tomographic velocity model, and local stress tensor. The results show that most MSEs occurred near the production wells. Magnitudes fall between −2.2 and 0.0 with larger events located closer to the production wells. Most MSEs occurred within a westward‐dipping normal fault zone in the reservoir associated with anomalously low P‐wave velocity values. The focal mechanism and stress inversion results show predominantly normal faulting with the maximum horizontal stress oriented north‐south. We suggest that the MSEs during shutdown were triggered on pre‐existing, small‐scale, critically stressed fault patches in the reservoir as the pore pressure increased around the production wells when the production pumping ceased. We interpret the larger MSE magnitudes closer to the production wells as a result of higher pore pressure increase.

15 GEOTHERMAL ENERGY↗
DOE OSTI2024

Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program

One of the justifiable criticisms of human genetic studies is the underrepresentation of participants from diverse populations. Lack of inclusion must be addressed at-scale to identify causal disease factors and understand the genetic causes of health disparities. We present genome-wide associations for 2068 traits from 635,969 participants in the Department of Veterans Affairs Million Veteran Program, a longitudinal study of diverse United States Veterans. Systematic analysis revealed 13,672 genomic risk loci; 1608 were only significant after including non-European populations. Fine-mapping identified causal variants at 6318 signals across 613 traits. One-third (n = 2069) were identified in participants from non-European populations. This reveals a broadly similar genetic architecture across populations, highlights genetic insights gained from underrepresented groups, and presents an extensive atlas of genetic associations.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1999

Assessment of the 1997-1998 Asian Monsoon Anomalies

Using State-of-the-art satellite-gauge monthly rainfall estimate and optimally interpolated sea surface temperature (SST) data, we have assessed the 1997-98 Asian monsoon anomalies in terms of three basic causal factors: basin-scale SST, regional coupling, and internal variability. Singular Value Decomposition analysis of rainfall and SST are carried out globally over the entire tropics and regionally over the Asian monsoon domain. Contributions to monsoon rainfall predictability by various factors are evaluated from cumulative anomaly correlation with dominant regional SVD modes. Results reveal a dominant, large-scale monsoon-El Nino coupled mode with well-defined centers of action in the near-equatorial monsoon regions. it is noted that some subcontinental regions such as all-India, or arbitrarily chosen land regions over East Asia, while important socio-economically, are not near the centers of influence from El Nino, hence are not necessarily representative of the response of the entire monsoon region to El Nino. The observed 1997-98 Asian monsoon anomalies are found to be very complex with approximately 34% of the anomalies attributable to basin- scale SST influence associated with El Nino. Regional coupled processes contribute an additional 19%, leaving about 47% due to internal dynamics. Also noted is that the highest monsoon predictability is not necessary associated with major El Nino events (e.g. 1997, 1982) but rather in non-El Nino years (e.g. 1980, 1988) when contributions from the regional coupled modes far exceed those from the basin-scale SST. The results suggest that in order to improve monsoon seasonal-to-interannual predictability, there is a need to exploit not only monsoon-El Nino relationship, but also monsoon regional coupled processes and their modulation by long-term climate change.

Lau, William K.-M.↗
NASA NTRS2016

Assurance of Fault Management: Risk-Significant Adverse Condition Awareness

Fault Management (FM) systems are ranked high in risk-based assessment of criticality within flight software, emphasizing the importance of establishing highly competent domain expertise to provide assurance for NASA projects, especially as spaceflight systems continue to increase in complexity. Insight into specific characteristics of FM architectures seen embedded within safety- and mission-critical software systems analyzed by the NASA Independent Verification Validation (IVV) Program has been enhanced with an FM Technical Reference (TR) suite. Benefits are aimed beyond the IVV community to those that seek ways to efficiently and effectively provide software assurance to reduce the FM risk posture of NASA and other space missions. The identification of particular FM architectures, visibility, and associated IVV techniques provides a TR suite that enables greater assurance that critical software systems will adequately protect against faults and respond to adverse conditions. The role FM has with regard to overall asset protection of flight software systems is being addressed with the development of an adverse condition (AC) database encompassing flight software vulnerabilities.Identification of potential off-nominal conditions and analysis to determine how a system responds to these conditions are important aspects of hazard analysis and fault management. Understanding what ACs the mission may face, and ensuring they are prevented or addressed is the responsibility of the assurance team, which necessarily should have insight into ACs beyond those defined by the project itself. Research efforts sponsored by NASAs Office of Safety and Mission Assurance defined terminology, categorized data fields, and designed a baseline repository that centralizes and compiles a comprehensive listing of ACs and correlated data relevant across many NASA missions. This prototype tool helps projects improve analysis by tracking ACs, and allowing queries based on project, mission type, domain component, causal fault, and other key characteristics. The repository has a firm structure, initial collection of data, and an interface established for informational queries, with plans for integration within the Enterprise Architecture at NASA IVV, enabling support and accessibility across the Agency. The development of an improved workflow process for adaptive, risk-informed FM assurance is currently underway.

Software Verification & Validation↗
NASA NTRS2012

Analysis of the Radiated Field in an Electromagnetic Reverberation Chamber as an Upset-Inducing Stimulus for Digital Systems

Preliminary data analysis for a physical fault injection experiment of a digital system exposed to High Intensity Radiated Fields (HIRF) in an electromagnetic reverberation chamber suggests a direct causal relation between the time profile of the field strength amplitude in the chamber and the severity of observed effects at the outputs of the radiated system. This report presents an analysis of the field strength modulation induced by the movement of the field stirrers in the reverberation chamber. The analysis is framed as a characterization of the discrete features of the field strength waveform responsible for the faults experienced by a radiated digital system. The results presented here will serve as a basis to refine the approach for a detailed analysis of HIRF-induced upsets observed during the radiation experiment. This work offers a novel perspective into the use of an electromagnetic reverberation chamber to generate upset-inducing stimuli for the study of fault effects in digital systems.

Torres-Pomales, Wilfredo↗
DOE OSTI2024

A multi-ancestry genetic study of pain intensity in 598,339 veterans

Chronic pain is a common problem, with more than one-fifth of adult Americans reporting pain daily or on most days. It adversely affects the quality of life and imposes substantial personal and economic costs. Efforts to treat chronic pain using opioids had a central role in precipitating the opioid crisis. Despite an estimated heritability of 25–50%, the genetic architecture of chronic pain is not well-characterized, in part because studies have largely been limited to samples of European ancestry. To help address this knowledge gap, we conducted a cross-ancestry meta-analysis of pain intensity in 598,339 participants in the Million Veteran Program, which identified 126 independent genetic loci, 69 of which are new. Pain intensity was genetically correlated with other pain phenotypes, level of substance use and substance use disorders, other psychiatric traits, education level and cognitive traits. Integration of the genome-wide association studies findings with functional genomics data shows enrichment for putatively causal genes (n = 142) and proteins (n = 14) expressed in brain tissues, specifically in GABAergic neurons. Drug repurposing analysis identified anticonvulsants, β-blockers and calcium-channel blockers, among other drug groups, as having potential analgesic effects. Our results provide insights into key molecular contributors to the experience of pain and highlight attractive drug targets.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS2007

Investigation of the NOAA N' S Search and Rescue Antenna Inadvertent Deployment: Type C Mishap

The NOAA N' Search and Rescue Antenna (SRA) inadvertently deployed during a spacecraft rotation on April 14,2007. This rotation was part of a normal operation to configure the spacecraft for additional antenna and the solar array boom deployments. This procedure (red flag written) had been modified to look for a lost metal washer and a thermal blanket button. The modification to the procedure was reviewed and approved by the Lockheed Martin Missiles and Space (LMMS) Material Review Board (MRB) per standard procedures. The flag to the procedure introduced a counter clockwise rotation before the normal clockwise rotation. The antenna was temporally stowed and held in place via lacing cord. The lacing cord broke and allowed the SRA to inadvertently deploy during the clockwise rotation. The SRA broke through a hard stop bracket and damaged an instrument optical sensor radiator panel. The satellite damage appears to be minimal and there were no injuries to personnel. The damage to the Advanced Microwave Sounding Unit (AMSU)-A1 instrument has not been fully assessed. Based on mishap site visits, interviews and data analysis, the Mishap Investigation Team (MIT) identified the underlying causes of the mishap. Event and causal factor tree diagrams were developed, resulting in the identification of the proximate (or direct) cause and root causes of the mishap.

Sabelhaus, Phil↗
DOE OSTI2021

Recipes for a Successful Exit for Clean- and Hard-tech Startups

This study demonstrates the combinations of multiple causal factors that formulate a startup’s strategy to successfully “exit”, namely “recipes for a successful exit,” in the clean- and hard-tech sector. We identify seven key causal factors (i.e., causal conditions) that impact startup success, including commercial readiness, investor interactions, favorable industry, non-financial support, straightforward development path, experienced team, and visibility to investors. We also investigate the combinations of selective causal conditions that can provide further synergetic impact. We conduct the fuzzy-set qualitative comparative analysis (fsQCA) on seven US clean and hard-tech startups that exited between 2005 and 2016. The successful companies all demonstrate distinctive characteristics based on three general categories (1) robust ecosystem; (2) heavy-lifting team; or (3) external opportunity. Across these three categories, commercial readiness and strong investor interactions are necessary conditions for all exit cases. But there are important differences that drive success in each category, such as the interaction with non-financial support (in the robust ecosystem case), experienced team (in the heavy-lifting team case), and favorable industry (in the external opportunity case). Furthermore, our findings are meant to support entrepreneurs in reaching an exit by optimizing the given internal and external circumstances, and policymakers to build a robust ecosystem that can increase the success rate of the clean- and hardtech development.

99 GENERAL AND MISCELLANEOUS↗
NASA NTRS1979

Gravitational collapse in dust lanes and the appearance of spiral structure in galaxies

The possibility is considered that there are two types of spiral for each spiral galaxy: an underlying spiral of relatively old stars seen in red and IR photographs and a spiral outlined by H II regions and young bright blue stars. The origin of the first spiral is attributed to large-scale spiral density waves, and the second spiral is identified as a stochastic spiral. It is suggested that there is a physical or causal connection between the two spirals and that dust lanes play the role of intermediary. An analysis is performed which shows that such a model can account for the formation and destruction of giant molecular cloud complexes and for observed spiral structure in one simple unified theory.

Elmegreen, B. G.↗
DOE OSTI2021

The tortoise and the hare: a causality puzzle in AdS/CFT

Here, we pose and resolve a holographic puzzle regarding an apparent violation of causality in anti-de Sitter (AdS)/conformal field theory. If a point in the bulk of AdS moves at the speed of light, the boundary subregion that encodes it may need to move superluminally to keep up. With AdS 3 as our main example, we prove that the finite extent of the encoding regions prevents a paradox. We show that the length of the minimal-size encoding interval gives rise to a tortoise coordinate on AdS that measures the nonlocality of the encoding. We use this coordinate to explore circular and radial motion in the bulk before passing to the analysis of bulk null geodesics. For these null geodesics, there is always a critical encoding where the possible violation of causality is barely avoided. We show that in any other encoding, the possible violation is subcritical.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2020

Generation of ionic liquid tolerant Pseudomonas putida KT2440 strains via adaptive laboratory evolution

Although the use of ionic liquids (ILs) for the pretreatment of lignocellulosic biomass has been limited due to high costs, recent efforts to develop low-cost protic ILs show promise for achieving cost-effectiveness for biorefineries. However, an additional challenge remains in that ILs present in biomass hydrolysates are toxic to most microbial hosts, resulting in poor growth phenotypes. To address this issue, we applied an adaptive laboratory evolution (ALE) approach for tolerizing Pseudomonas putida KT2440, an industrially relevant bacterial host, to two low-cost ILs (triethanolammonium acetate [TEOH][OAc] and triethylammonium hydrogen sulfate [TEA][HS]). After continuous cultivations with gradually increased IL levels, we obtained evolved strains showing significant improvements in their growth performance under high concentrations of the ILs (maximum 4% [TEOH][OAc] and 8% [TEA][HS], in w/v) at which the wild-type strain cannot grow. Sequencing of evolved strains revealed multiple regions where mutations were associated with improved performance in minimal media conditions (relA, gacS, oprB/PP_1446, fleQ, tktA, and uvrY/PP_4100) and in IL-specific conditions (PP_5350, PP_4929/emrE, oprD, and PP_5324). We further validated the causality of the PP_5350 and emrE genes for improved IL tolerance via reverse engineering and transcriptomic analysis. Here, a common mutation in the PP_5350 gene, encoding a RpiR family transcriptional regulator, was shown to significantly upregulate the glyoxylate cycle for efficient acetate catabolism. In addition, it was suggested that the emrE gene encodes an efflux pump which can export [TEA][HS]. Finally, the cultivation of two of the best performing evolved strains with IL-treated biomass hydrolysates demonstrated their considerable potential to be used as platform strains. Taken as a whole, this work provides strains for utilization of IL-treated biomass and a mechanistic understanding that could be further leveraged to develop efficient microbial bioprocesses.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
NASA NTRS2015

The Human Factors of an Early Space Accident: Flight 3-65 of the X-15

The X-15 was a critical research vehicle in the early days of space flight. On November 15, 1967, the X-15-3 suffered an in-flight breakup. This 191st flight of the X-15 and the 65th flight of this third configuration was the only fatal accident of the X-15 program. This paper presents an analysis, from a human factors perspective, of the events that led up to the accident. The analysis is based on the information contained in the report of the Air Force-NASA Accident Investigation Board (AIB) dated January, 1968. The AIBs analysis addressed, primarily, the events that occurred subsequent to the pilots taking direct control of the reaction control system. The analysis described here suggests that all of the events that caused the accident occurred well before the moment when the pilot switched to direct control. Consequently, the analyses and conclusions regarding the causal factors of, and the contributing factors to, the loss of Flight 3-65 presented here differ from those of the AIB based on the same evidence. Although the accident occurred in 1967, the results of the presented analysis are still relevant today. We present our analysis and discuss its implications for the safety of space operations.

accident investigation↗
NASA NTRS1991

Cross-correlation analysis of on-orbit residual accelerations in Spacelab

To characterize the low-gravity environment within orbiting space laboratories, researchers are operating sensitive accelerometer systems. Transient accelerations recorded in spacecraft can have magnitudes up to 0.01 g over a wide range of frequencies. These accelerations have components in the 0.001-100-Hz range no greater in magnitude than 0.001 g. Some experiments can be sensitive to such accelerations, so investigators are interested in identifying causal relationships between accelerations and experimental results. Here, two forms of synthetic experiment data created using Spacelab 3 accelerometer data are evaluated using cross-correlation analysis. The results show that the use of cross-correlation techniques is appropriate, for specific experiment classes, for assessing relationships between both transient and oscillatory residual accelerations and experimental results recorded in a low-gravity environment.

Rogers, Melissa J. B.↗
NASA NTRS2001

Space Shuttle RTOS Bayesian Network

With shrinking budgets and the requirements to increase reliability and operational life of the existing orbiter fleet, NASA has proposed various upgrades for the Space Shuttle that are consistent with national space policy. The cockpit avionics upgrade (CAU), a high priority item, has been selected as the next major upgrade. The primary functions of cockpit avionics include flight control, guidance and navigation, communication, and orbiter landing support. Secondary functions include the provision of operational services for non-avionics systems such as data handling for the payloads and caution and warning alerts to the crew. Recently, a process to selection the optimal commercial-off-the-shelf (COTS) real-time operating system (RTOS) for the CAU was conducted by United Space Alliance (USA) Corporation, which is a joint venture between Boeing and Lockheed Martin, the prime contractor for space shuttle operations. In order to independently assess the RTOS selection, NASA has used the Bayesian network-based scoring methodology described in this paper. Our two-stage methodology addresses the issue of RTOS acceptability by incorporating functional, performance and non-functional software measures related to reliability, interoperability, certifiability, efficiency, correctness, business, legal, product history, cost and life cycle. The first stage of the methodology involves obtaining scores for the various measures using a Bayesian network. The Bayesian network incorporates the causal relationships between the various and often competing measures of interest while also assisting the inherently complex decision analysis process with its ability to reason under uncertainty. The structure and selection of prior probabilities for the network is extracted from experts in the field of real-time operating systems. Scores for the various measures are computed using Bayesian probability. In the second stage, multi-criteria trade-off analyses are performed between the scores. Using a prioritization of measures from the decision-maker, trade-offs between the scores are used to rank order the available set of RTOS candidates.

Morris, A. Terry↗
NASA NTRS2016

The Human Factors of an Early Space Accident: Flight 3-65 of the X-15

The X-15 was a critical research vehicle in the early days of space flight. On November 15, 1967, the X-15-3 suffered an in-flight breakup. This 191st flight of the X-15 and the 65th flight of this third configuration was the only fatal accident of the X-15 program. This paper presents an analysis, from a human factors perspective, of the events that led up to the accident. The analysis is based on the information contained in the report of the Air Force-NASA Accident Investigation Board (AIB) dated January, 1968. The AIBs analysis addressed, primarily, the events that occurred subsequent to the pilot's taking direct control of the reaction control system. The analysis described here suggests that, rather than events following the pilot's switch to direct control, it was the events preceding the switch that led to the accident. Consequently, the analyses and conclusions regarding the causal factors of, and the contributing factors to, the loss of Flight 3-65 presented here differ from those of the AIB based on the same evidence. Although the accident occurred in 1967, the results of the presented analysis are still relevant today. We present our analysis and discuss its implications for the safety of space operations.

X-15↗