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At least 127 records · Page 7

Omics analyses and biochemical study of Phlebiopsis gigantea elucidate its degradation strategy of wood extractives

Wood extractives, solvent-soluble fractions of woody biomass, are considered to be a factor impeding or excluding fungal colonization on the freshly harvested conifers. Among wood decay fungi, the basidiomycete Phlebiopsis gigantea has evolved a unique enzyme system to efficiently transform or degrade conifer extractives but little is known about the mechanism(s). In this study, to clarify the mechanism(s) of softwood degradation, we examined the transcriptome, proteome, and metabolome of P. gigantea when grown on defined media containing microcrystalline cellulose and pine sapwood extractives. Beyond the conventional enzymes often associated with cellulose, hemicellulose and lignin degradation, an array of enzymes implicated in the metabolism of softwood lipophilic extractives such as fatty and resin acids, steroids and glycerides was significantly up-regulated. Among these, a highly expressed and inducible lipase is likely responsible for lipophilic extractive degradation, based on its extracellular location and our characterization of the recombinant enzyme. Our results provide insight into physiological roles of extractives in the interaction between wood and fungi.

59 BASIC BIOLOGICAL SCIENCES↗

Simultaneous Overexpression of FERULOYL‐CoA 6′‐HYDROXYLASE 1 and COUMARIN SYNTHASE Leads to Coumarin‐Enriched Lignin and Improved Saccharification in Greenhouse‐ and Field‐Grown Poplar

ABSTRACT The urgent need for renewable resources has increased the interest in woody biomass to manufacture bio‐based products. However, lignin recalcitrance limits the enzymatic conversion of wood into fermentable sugars, posing a major challenge for biomass deconstruction. To address this problem, we aimed at incorporating the coumarin scopoletin into the lignin polymer of poplar ( Populus tremula × P . alba ) by expressing FERULOYL‐CoA 6′‐HYDROXYLASE 1 ( F6′H1 ) and COUMARIN SYNTHASE ( COSY ) in lignifying cells. Three constructs were evaluated: two bicistronic constructs, SCOP1 ( COSY followed by F6′H1 ) and SCOP2 ( F6′H1 followed by COSY ), and one monocistronic, SCOP3 (only F6′H1 ). SCOP1 poplars produced most free scopoletin without altering overall lignin, cellulose or hemicellulose content. SCOP2 poplars were overall less efficient in scopoletin production and most of these lines showed a severe biomass yield penalty, whereas SCOP3 caused plant lethality. NMR and metabolic analyses confirmed that scopoletin cross‐coupled with G and S monomers during lignification in SCOP1 lines. In addition to scopoletin, the detection of benzodioxane structures revealed the incorporation of dihydroxycoumarins. Overall coumarin incorporation in lignin amounted up to 2.3%. After alkaline pretreatment, wood from greenhouse‐grown SCOP1 poplars released up to 29% more glucose compared to the wild type upon limited saccharification. Field‐testing of three SCOP1 lines showed a 6 to 11% increase in saccharification efficiency, with the line containing the lowest scopoletin levels maintaining normal growth. These results demonstrate that engineering lignin composition in poplar can improve saccharification, and emphasize the importance of construct design, translational research and field validation.

alternative lignin monomers↗

LigninGraphs: lignin structure determination with multiscale graph modeling

Lignin is an aromatic biopolymer found in ubiquitous sources of woody biomass. Designing and optimizing lignin valorization processes requires a fundamental understanding of lignin structures. Experimental characterization techniques, such as 2D-heteronuclear single quantum coherence (HSQC) nuclear magnetic resonance (NMR) spectra, could elucidate the global properties of the polymer molecules. Computer models could extend the resolution of experiments by representing structures at the molecular and atomistic scales. We introduce a graph-based multiscale modeling framework for lignin structure generation and visualization. The framework employs accelerated rejection-free polymerization and hierarchical Metropolis Monte Carlo optimization algorithms. We obtain structure libraries for various lignin feedstocks based on literature and new experimental NMR data for poplar wood, pinewood, and herbaceous lignin. The framework could guide researchers towards feasible lignin structures, efficient space exploration, and future kinetics modeling. Its software implementation in Python, LigninGraphs, is open-source and available on GitHub.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Algae/Wood Blends Hydrothermal Liquefaction and Upgrading: 2019 State of Technology

The fiscal year (FY) 2019 State of Technology (SOT) Assessment for a microalgae and woody biomass blend feedstock hydrothermal liquefaction (HTL) and biocrude upgrading system has been completed and reported here. This study is a preliminary economic analysis for this system. Inputs from the 2019 NREL open pond algae cultivation model provided microalgae seasonal flowrates and dewatered algae feedstock price. These inputs have been coupled with modeled experimental data from PNNL for algae/wood blends processed via HTL to assess the cost impacts. The TEA results demonstrated a 28% reduction in the conversion cost only from $1.22/gge in 2018 to $0.88/gge in 2019.

09 BIOMASS FUELS↗

Wood-to-Fuel for California's Transportation Sector using Autothermal Pyrolysis (FRD-17-002 Progress Report)

Both our subcontract with ISU and the one with Frontline have been finalized and the requisitions for the initiation of them have been submitted (this places defined amounts of funding available to the subcontracts, for the first allotment of work to be done, for which we already have funds from the CEC). Once the requisitions are approved, the subcontracts will be fully executed. During the month of August, further work on the Market Report was carried out, and will continue, as this is the most adaptable of the LLNL-main tasks to working remotely, so will not have any delays due to the shelter-in-place orders. Organization of our databases and sources on availability, and potential availability of all woody biomass was continued. Tables and figures for the report were begun as well, and the outline was finalized. Additionally, a parametric study for pyrolysis’ different products was done, with a metric of return on capital investment being chosen. Evaluated parameters include feedstock price, CO2 credit price, CO2 transport cost, and minimum fuel selling price, for drop-in fuels.

09 BIOMASS FUELS↗

Port Authority of New York and New Jersey Sustainable Aviation Fuel Logistics and Production Study

The Port Authority of New York and New Jersey (PANYNJ) sustainability commitment is to meet the goals set by the Paris Agreement, with an interim greenhouse gas reduction target of 35% by 2025 and 80% by 2050. PANYNJ is seeking sustainable solutions to reduce carbon emissions for all public forms of transportation, including aviation. Similarly, the global aviation industry adopted the Carbon Offsetting and Reduction Scheme for International Aviation (CORSIA), which seeks to cap net carbon dioxide (CO 2 ) aviation emissions at 2020 levels through 2035. Industry has also set a goal of reducing CO 2 emissions by 50% compared to 2005 levels by 2050. Sustainable aviation fuel (SAF), made from non-petroleum feedstocks, is a near-term alternative fuel that reduces emissions from air transportation. The National Renewable Energy Laboratory (NREL) conducted a resource assessment and a techno-economic analysis to identify the potential for production in the port district. Although SAF could be sourced from other areas of the United States or imported, an evaluation of local production was conducted due to the potential positive impacts of a circular economy by converting local waste feedstocks into SAF for use at nearby airports. The study found that the highest volumes of feedstock nearby were municipal solid waste and woody biomass. SAF must be blended with Jet A up to certain percent determined by ASTM International fuel quality standards prior to use in aircraft. SAF from a stand-alone facility could be delivered by barge, rail, or truck to a Linden, New Jersey based terminal for blending with Jet A or it could be blended in the Gulf region and shipped via the Colonial pipeline to one of the terminals. The investment will take place at the terminal(s) to accommodate SAF/Jet A blends and it will be business as usual for the airports in how they receive fuel and distribute it to aircraft.

09 BIOMASS FUELS↗

Evaluation of Hopper Flow Prediction based on Cubical Triaxial Tester Data and FEM

A cubical triaxial tester (CTT) laboratory device was used to collect key bulk flow characteristics of Crumbles® 6mm rotary sheared woody biomass and Crumbles® 2mm rotary sheard corn stover. The flow properties and a CAD model of a hopper and conveyor system to predict the consistency of flow of material from the hopper. Prediction included the likeliness of jamming, bridging, or ratholing. Each material was then loaded into the hopper and the actual bulk flow was measured. Measured flow closely matched the predicted flow.

09 BIOMASS FUELS↗

Quantifying Socioeconomic Impacts of Electricity Generating Technologies

The levelized cost of energy (LCOE) and other cost metrics used in energy planning do not account for out-of-market impacts of the technology choice. While a decision-maker at the utility or asset owner level may compare multiple forms of electricity generating technology using LCOE, a decision-maker over energy policy or community stakeholders may be interested in considering impacts beyond those that LCOE measures. This report quantifies economic impacts such as jobs and wage growth across electricity generation technologies then develops an approach to systematically compare socioeconomic metrics across technology choices. To address additional workforce related impacts, this report also compares the typical workforce education requirements and annual income levels for multiple types of electricity generating facilities. The grid scale electricity generating technologies analyzed in this report produce power using conventional hydroelectric dams, coal, natural gas, nuclear reactors, solar PV, land-based wind turbines, geothermal heat, and woody biomass combustion. Although it doesn’t generate electricity itself, the economic impacts associated with battery storage equipment manufacturing and installation were also analyzed.

03 NATURAL GAS↗

Testing- and Model- Based Optimization of Coal-fired Primary Heater Design for Indirect Supercritical CO 2 Power Cycles (Final Scientific and Technical Report)

The overall objective of this project was to perform the R&D necessary to mitigate the risk associated with the design of a primary heat exchanger for a solid-fired combustion system coupled with an indirect-fired closed-loop Brayton Cycle utilizing supercritical CO 2 . The key technological hurdle was the coupling of a solid-fuel firing system with the primary heater, which poses a singular challenge, which is the management of burner performance and operational conditions in a way to manage heat exchanger tube metal temperatures and temperature ramp rates in the absence of fluid phase change on the inside of the tubes. We designed and built the first ever pseudo power system employing a simple recuperated supercritical CO 2 closed-loop Brayton Cycle coupled to a solid-fuel fired system. Advanced coupled CFD and process modeling were used to design the primary heat exchanger (PHX), which consisted of both radiative and convective sections, to limit tube metal temperatures resulting from the heat release profile of the solid fuel flame near the radiative tubes. The heat exchanger was designed to produce finished CO 2 temperatures of 600 °C a pressure of 20.7 MPa and CO 2 flow of 5.5 kg/s. The constructed PHX was capable of 1.2 MWth heat uptake. During design of the PHX, the modeling showed that most variables influencing flame shape (burner stoichiometric ratio and register velocities and swirl) were not suitable to manage heat flux to the metal surfaces. This is because they substantially increased adiabatic flame temperature through the influence of localized stoichiometric ratio. Excess air and firing rate were the two most powerful variables that could be used to control tube surface temperatures. The coupled system was operated for a total of 407 hours, with the longest continuous run of 248 hours. For 62% of the operational time, the unit was unmanned and in automatic control. The fuels used for the testing included natural gas, two Utah Bituminous coals, woody biomass, and bagasse. During the testing we were able to verify the 1.2 MWth heat uptake and we operated at a finished CO 2 temperature of 607 °C and a pressure of 20.3 MPa simultaneously. The real-time corrosion rate of the Super 304H tube CO 2 surface in the region of the radiative section of the PHX were measured, at an approximate temperature of 550 °C. The two key variables related to corrosion rate are the pressure and flow rate of the CO 2 . A technoeconomic analysis was performed at a scale of 120 MWE. The updated analysis showed that the efficiency of an sCO 2 power producing plant will be related to the pressure drop of the PHX.

01 COAL, LIGNITE, AND PEAT↗

Massachusetts and New England Sustainable Aviation Fuel Study

The Massachusetts Port Authority established a project to assess feedstock availability to produce SAF near 10 New England airports. A techno-economic analysis was conducted to determine renewable fuels and SAF that could be produced from these feedstocks. The resource assessment found municipal solid waste, woody biomass, and food waste were most abundant. The techno-economic analysis found that potential fuel production varied widely based on location, feedstock, and technology production pathway ranging from 1 to 369 million gallons of gasoline equivalent per year. An assessment of infrastructure readiness to handle SAF was conducted. It was determined that SAF produced outside of New England should be blended in other regions with more capacity and flexibility and delivered to New England as Jet A is today. For SAF produced in New England, there are terminals that have existing infrastructure to receive, blend, and distribute SAF/Jet A blends.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Massachusetts and New England SAF Study [Slides]

The Massachusetts Port Authority established a project to assess feedstock availability to produce SAF near 10 New England airports. A techno-economic analysis was conducted to determine renewable fuels and SAF that could be produced from these feedstocks. The resource assessment found municipal solid waste, woody biomass, and food waste were most abundant. The techno-economic analysis found that potential fuel production varied widely based on location, feedstock, and technology production pathway. An assessment of infrastructure readiness to handle SAF was conducted. It was determined that SAF produced outside of New England should be blended in other regions with more capacity and flexibility and delivered to New England as Jet A is today. For SAF produced in New England, there are terminals that have existing infrastructure to receive, blend, and distribute SAF/Jet A blends.

33 ADVANCED PROPULSION SYSTEMS↗

Engineering custom morpho- and chemotypes of Populus for sustainable production of biofuels, bioproducts, and biomaterials

Humans have been modifying plant traits for thousands of years, first through selection (i.e., domestication) then modern breeding, and in the last 30 years, through biotechnology. These modifications have resulted in increased yield, more efficient agronomic practices, and enhanced quality traits. Precision knowledge of gene regulation and function through high-resolution single-cell omics technologies, coupled with the ability to engineer plant genomes at the DNA sequence, chromatin accessibility, and gene expression levels, can enable engineering of complex and complementary traits at the biosystem level. Populus spp., the primary genetic model system for woody perennials, are among the fastest growing trees in temperate zones and are important for both carbon sequestration and global carbon cycling. Ample genomic and transcriptomic resources for poplar are available including emerging single-cell omics datasets. To expand use of poplar outside of valorization of woody biomass, chassis with novel morphotypes in which stem branching and tree height are modified can be fabricated thereby leading to trees with altered leaf to wood ratios. These morphotypes can then be engineered into customized chemotypes that produce high value biofuels, bioproducts, and biomaterials not only in specific organs but also in a cell-type-specific manner. For example, the recent discovery of triterpene production in poplar leaf trichomes can be exploited using cell-type specific regulatory sequences to synthesize high value terpenes such as the jet fuel precursor bisabolene specifically in the trichomes. By spatially and temporally controlling expression, not only can pools of abundant precursors be exploited but engineered molecules can be sequestered in discrete cell structures in the leaf. The structural diversity of the hemicellulose xylan is a barrier to fully utilizing lignocellulose in biomaterial production and by leveraging cell-type-specific omics data, cell wall composition can be modified in a tailored and targeted specific manner to generate poplar wood with novel chemical features that are amenable for processing or advanced manufacturing. Precision engineering poplar as a multi-purpose sustainable feedstock highlights how genome engineering can be used to re-imagine a crop species.

09 BIOMASS FUELS↗

Effects of feruloyl-CoA 6'-hydroxylase 1 overexpression on lignin and cell wall characteristics in transgenic hybrid aspen

In plant cell walls, lignin, cellulose, and the hemicelluloses form intricate three-dimensional structures. Owing to its complexity, lignin often acts as a bottleneck for the efficient utilization of polysaccharide components as biochemicals and functional materials. A promising approach to mitigate and/or overcome lignin recalcitrance is the qualitative and quantitative modification of lignin by genetic engineering. Feruloyl-CoA 6'-hydroxylase (F6'H1) is a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of feruloyl-CoA, one of the intermediates of the lignin biosynthetic pathway, into 6'-hydroxyferuloyl-CoA, the precursor of scopoletin (7-hydroxy-6-methoxycoumarin). In a previous study with Arabidopsis thaliana, we demonstrated that overexpression of F6'H1 under a xylem-preferential promoter led to scopoletin incorporation into the cell wall. This altered the chemical structure of lignin without affecting lignin content or saccharification efficiency. In the present study, the same F6'H1 construct was introduced into hybrid aspen (Populus tremula × tremuloides T89), a model woody plant, and its effects on plant morphology, lignin chemical structure, global gene expression, and phenolic metabolism were examined. The transgenic plants successfully overproduced scopoletin while exhibiting severe growth retardation, a phenotype not previously observed in Arabidopsis. Scopoletin accumulation was most pronounced in the secondary walls of tracheary elements and the compound middle lamella, with low levels in the fiber cell walls. Overexpression of F6'H1 also affected the metabolism of aromatics, including lignin precursors. Heteronuclear single-quantum coherence (HSQC) NMR spectroscopy revealed that scopoletin in cell walls was bound to lignin, leading to a reduction in lignin content and changes in its monomeric composition and molar mass distribution. Furthermore, the enzymatic saccharification efficiency of the transgenic cell walls was more than three times higher than that of the wild-type plants, even without pretreatment. Although addressing growth inhibition remains a priority, incorporating scopoletin into lignin demonstrates significant potential for improving woody biomass utilization.

59 BASIC BIOLOGICAL SCIENCES↗

Eucalyptus Are Unlikely to Escape Plantations and Invade Surrounding Forests Managed with Prescribed Fire in Southeastern US

Woody biomass production can increase through establishment of non-native tree species exhibiting greater growth potential than traditional native species. Interest in growing Eucalyptus in the southeastern US has raised concern over its potential spread and invasion, which could impact ecosystem properties and functions. Within the matrix of land use where Eucalyptus establishment is being considered in the southeastern US, surrounding pine forests managed with fire represent a likely pathway for invasion. We used greenhouse and field experiments to evaluate the potential invasion risk of Eucalyptus benthamii. We were specifically interested in determining if seeds could successfully germinate in fire-maintained pine forests and if fire-return intervals influenced germination through impacts on litter accumulation and light availability. The greenhouse experiment investigated the influence of light availability on germination success, whereas the field study investigated the influence of time since fire, and thus litter accumulation and light availability, on germination success. Percent germination was similar under non-shaded controls and moderate shade, but complete shade resulted in low germination rates. Germination was lower in the field compared to the greenhouse and was influenced by litter and light availability, which varied according to fire-return intervals. Litter increased, and light availability decreased, with time since burn. Germination was negatively related to litter depth and positively related to light availability, thereby decreasing with time since fire. Germination increased with litter removal but remained positively related to light availability after litter removal. Higher germination with litter removal suggests germination is influenced by litter, but higher germination with increased light availability, regardless of raking, suggests germination is also influenced by light availability. Despite these relationships, no seedlings persisted through the growing season. The low germination rates under a variety of field conditions coupled with the lack of persistence suggests establishment may be unlikely, regardless of the surrounding land matrix.

54 ENVIRONMENTAL SCIENCES↗

Canopy reflectance modeling in a tropical wooded grassland

The Li-Strahler canopy reflectance model, driven by LANDSAT Thematic Mapper (TM) data, provided regional estimates of tree size and density in two bioclimatic zones in Africa. This model exploits tree geometry in an inversion technique to predict average tree size and density from reflectance data using a few simple patameters measured in the field and in the imagery. Reflectance properties of the trees were measured in the study sites using a pole-mounted radiometer. The measurements showed that the assumptions of the simple Li-Strahler model are reasonable for these woodlands. The field radiometer measurements were used to calculate the normalized difference vegetation index (NDVI), and the integrated NDVI over the canopy was related to crown volume. Predictions of tree size and density from the canopy model were used with allometric equations from the literature to estimate woody biomass and potential foliar biomass for the sites and for the regions. Estimates were compared with independent measurements made in the Sahelian sites, and to typical values from the literature for these regions and for similar woodlands. In order to apply the inversion procedure regionally, an area must first be stratified into woodland cover classes, and dry-season TM data were used to generate a stratum map of the study areas with reasonable accuracy. The method used was unsupervised classification of multi-data principal components images.

Simonett, David↗

The effect of topography on radar scattering from vegetated areas

This paper shows how the radar scattering from vegetated areas is affected by the topography of the surface underneath the vegetation. It is shown, using a discrete scatterer model, that the dominant scattering mechanism may change drastically when the ground surface is tilted relative to the horizontal. In the case of a horizontal ground surface, total scattering may be dominated by scattering off the tree trunks, followed by a reflection off the ground surface. For a relatively small tilt in the ground surface (about 2 deg from horizontal), the ground-trunk interaction term may be replaced by scattering from the branches alone as the dominant scattering mechanism. We also show that the effect of the topography is more pronounced for scattering by longer wavelengths, and discuss the implications on algorithms designed to infer forest woody biomass and soil and vegetation moisture using polarimetric SAR data. The effect of the topography on the scattering behavior from forested areas is illustrated with images acquired by the NASA/JPL three-frequency polarimetric SAR over the Black Forest in Germany.

Van Zyl, Jakob J.↗

The effect of topography on radar scattering from vegetated areas

It is shown how radar scattering from vegetated areas is affected by the topography of the surface underneath the vegetation, and that by the use of a discrete scatterer model the dominant scattering mechanism may change drastically when the ground surface is tilted relative to the horizontal. In the case of a horizontal ground surface total scattering may be dominated by scattering off the tree trunks, followed by a reflection off the ground surface. It is shown that for a relatively small tilt in the ground surface the ground-trunk interaction term may be replaced by scattering from the branches alone as the dominant scattering mechanism. The effect of the topography is more pronounced for scattering by longer wavelengths. The implications for algorithms designed to infer forest woody biomass and soil and vegetation moisture using polarimetric synthetic aperture radar (SAR) data are discussed.

Van Zyl, Jakob J.↗

Land cover stratification using Landsat Thematic Mapper data in Sahelian and Sudanian woodland and wooded grassland

A standard methodology for thematic mapping of natural vegetation using remotely sensed imagery and digital image processing was modified to account for the spatial and spectral properties of semi-arid landscapes, and tested in study areas in the Sahelian and Sudanian zones, Mali. A principal components transformation of registered wet and dry season Landsat TM images produced a set of synthetic spectral channels differentiating vegetation cover between seasons, and allowed areas with annual grass growth to be distinguished from areas with woody cover. The transformed data were statistically clustered and clusters were assigned to vegetation type and density categories. In a separate step, the images were manually interpreted to differentiate broad soil classes. Four statistics were compared to evaluate the accuracy of the maps based on sample points from air photos. For the relatively detailed categories initially defined, map accuracies were substandard; however, when vegetation density classes were aggregated, overall accuracy was around 90 percent, and class accuracy was greater than 80 percent for most classes. This method is suitable for stratification and inventory of woody biomass at a regional scale in semi-arid woodland and wooded grassland.

Franklin, J.↗