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At least 127 records · Page 7

Characterization, comparison, and optimization of lattice light sheets

Lattice light sheet microscopy excels at the noninvasive imaging of three-dimensional (3D) dynamic processes at high spatiotemporal resolution within cells and developing embryos. Recently, several papers have called into question the performance of lattice light sheets relative to the Gaussian sheets most common in light sheet microscopy. Here, we undertake a theoretical and experimental analysis of various forms of light sheet microscopy, which demonstrates and explains why lattice light sheets provide substantial improvements in resolution and photobleaching reduction. The analysis provides a procedure to select the correct light sheet for a desired experiment and specifies the processing that maximizes the use of all fluorescence generated within the light sheet excitation envelope for optimal resolution while minimizing image artifacts and photodamage. We also introduce a new type of “harmonic balanced” lattice light sheet that improves performance at all spatial frequencies within its 3D resolution limits and maintains this performance over lengthened propagation distances allowing for expanded fields of view.

59 BASIC BIOLOGICAL SCIENCES↗

Experimental protocol for sea level projections from ISMIP6 stand-alone ice sheet models

Projection of the contribution of ice sheets to sea level change as part of the Coupled Model Intercomparison Project Phase 6 (CMIP6) takes the form of simulations from coupled ice sheet–climate models and stand-alone ice sheet models, overseen by the Ice Sheet Model Intercomparison Project for CMIP6 (ISMIP6). This paper describes the experimental setup for process-based sea level change projections to be performed with stand-alone Greenland and Antarctic ice sheet models in the context of ISMIP6. The ISMIP6 protocol relies on a suite of polar atmospheric and oceanic CMIP-based forcing for ice sheet models, in order to explore the uncertainty in projected sea level change due to future emissions scenarios, CMIP models, ice sheet models, and parameterizations for ice–ocean interactions. We describe here the approach taken for defining the suite of ISMIP6 stand-alone ice sheet simulations, document the experimental framework and implementation, and present an overview of the ISMIP6 forcing to be used by participating ice sheet modeling groups.

54 ENVIRONMENTAL SCIENCES↗

A comparison of coronal and interplanetary current sheet inclinations

The HAO white light K-coronameter observations show that the inclination of the heliospheric current sheet at the base of the corona can be both large (nearly vertical with respect to the solar equator) or small during Cararington rotations 1660 - 1666 and even on a single solar rotation. Voyager 1 and 2 magnetic field observations of crossing of the heliospheric current sheet at distances from the Sun of 1.4 and 2.8 AU. Two cases are considered, one in which the corresponding coronameter data indicate a nearly vertical (north-south) current sheet and another in which a nearly horizontal, near equatorial current sheet is indicated. For the crossings of the vertical current sheet, a variance analysis based on hour averages of the magnetic field data gave a minimum variance direction consistent with a steep inclination. The horizontal current sheet was observed by Voyager as a region of mixed polarity and low speeds lasting several days, consistent with multiple crossings of a horizontal but irregular and fluctuating current sheet at 1.4 AU. However, variance analysis of individual current sheet crossings in this interval using 1.92 see averages did not give minimum variance directions consistent with a horizontal current sheet.

Behannon, K. W.↗

A comparison of coronal and interplanetary current sheet inclinations

The HAO white light K-coronameter observations show that the inclination of the heliospheric current sheet at the base of the corona can be both large (nearly vertical with respect to the solar equator) or small during Cararington rotations 1660 - 1666 and even on a single solar rotation. Voyager 1 and 2 magnetic field observations of crossing of the heliospheric current sheet at distances from the sun of 1.4 and 2.8 AU. Two cases are considered, one in which the corresponding coronameter data indicate a nearly vertical (north-south) current sheet and another in which a nearly horizontal, near equatorial current sheet is indicated. For the crossings of the vertical current sheet, a variance analysis based on hour averages of the magnetic field data gave a minimum variance direction consistent with a steep inclination. The horizontal current sheet was observed by Voyager as a region of mixed polarity and low speeds lasting several days, consistent with multiple crossings of a horizontal but irregular and fluctuating current sheet at 1.4 AU. However, variance analysis of individual current sheet crossings in this interval using 1.92 see averages did not give minimum variance directions consistent with a horizontal current sheet. Previously announced in STAR as N83-31566

Behannon, K. W.↗

Polycrystalline Silicon Sheets for Solar Cells by the Improved Spinning Method

Cost reduction of silicon materials in the photovoltaic program of materials was examined. The current process of producing silicon sheets is based entirely on the conventional Czochralski ingot growth and wafering used in the semiconductor industry. The current technology cannot meet the cost reduction demands for producing low cost silicon sheets. Alternative sheet production processes such as unconventional crystallization are needed. The production of polycrystalline silicon sheets by unconventional ingot technology is the casting technique. Though large grain sheets were obtained by this technique, silicon ribbon growth overcomes deficiencies of the casting process by obtaining the sheet directly from the melt. The need to solve difficulties of growth stability and impurity effects are examined. The direct formation process of polycrystalline silicon sheets with large grain size, smooth surface, and sharp edges from the melt with a high growth rate which will yield low cost silicon sheets for solar cells and the photovoltaic characteristics associated with this type of sheet to include an EBIC study of the grain boundaries are described.

Maeda, Y.↗

Deformation of the heliospheric current sheet

A kinematic analysis of the previously neglected effect of velocity inhomogeneity on the topology of the heliospheric current sheet in a radially flowing solar wind shows how the originally smooth current sheet becomes 'ruffled'. In the highly idealized case of a totally uniform, radial, steady solar wind, the shape of the current sheet is independent of distance from the sun. However, the real solar wind is inhomogeneous; the velocity varies from point to point along the current sheet, causing a distortion in the current sheet of progressively greater amplitude with increasing distance from the sun. This is true even for purely radial flow. Significant and observable distortion is produced by relatively small gradients in velocity; thus to predict or understand the shape of the heliospheric current sheet it is essential to know the solar wind in which the current sheet is embedded. Examples are given of mild velocity gradients which demonstrate the principles, the magnitude, and the character of the effect; deformation of the actual heliospheric current sheet in the highly variable solar wind is expected to be of far greater amplitude and complexity than in the simplified, tutorial examples. A new expression for the inclination of the current sheet as a function of velocity inhomogeneity and distance from the sun that is easily applied to the interpretation of solar wind data is also derived.

Suess, S. T.↗

The near-earth cross-tail current sheet - Detailed ISEE 1 and 2 case studies

Three near geomagnetic tail current sheet crossings of the ISEE 1 and 2 satellites, on April 5, 1979, are examined in detail. All are assoicated with the passage of an interplanetary shock and the region of variable solar wind pressure behind it. The general geometry of field reversing current sheets is discussed, and this geometry is examined for the cases studied, by using the ISEE 1 and 2 coorbiting satellite data sets. A new technique is employed which removes the effects of a variable sheet normal velocity for the first time. This allows us to calculate firm upper bounds on the current sheet thicknesses, and by utilizing certain physically motivated assumptions, determine the most probable actual sheet thicknesses, and inclinations of the field lines within these sheets. Current density profiles derived with this technique show the main cross-tail current sheet to be a structure that is many thermal ion-gyroradii thick and which is sometimes imbedded in a region that is three or more times thicker and contains much smaller current densities. These profiles also exhibit a considerable amount of fine structure in the sheet which appears as narrow peaks in the current density distributions. Possible explanations for these structures, and for the overall sheet structure itself, are examined.

Mccomas, D. J.↗

Two-mirrored galvanometer laser light sheet generator

Light sheets generated with either laser or noncoherent sources have found widespread application to flow visualization. Previous light sheet generating systems were usually dedicated to a specific viewing geometry. The technique with the most flexibility is the galvanometer mirror based laser light sheet system. A two-mirrored system was designed and developed to provide flexibility and adaptability to a wide range of applications. The design includes the capability to control the size and location of the laser light sheet in real time, to generate horizontal or vertical sheets, to sweep the sheet repeatedly through a volume, to generate multiple sheets with controllable separation and to rotate single or multiple laser light sheets. The system is capable of producing up to 12 sheets of laser light at an angular divergence of + or - 20 degrees. Maximum scan rate of any one line is 500 Hertz. This system has proven to be uniquely versatile and a patent has been applied for.

Leighty, B. D.↗

Deflections of anisotropic sandwich beams with variable face sheets and core thicknesses

A sandwich construction consists of a low-density core material with high strength face sheets bounded to the top and bottom surfaces. The construction has been widely used in the aerospace and marine industries due to its outstanding characteristics such as noise absorption, weight minimization, heat insulation, and better bending stiffness. In sandwich structures used in high-performance aircraft, the face sheets are often made of fiber-reinforced composite materials and the core is made of honeycomb. The structures may also have variable thickness so as to satisfy aerodynamic requirements. In the stress analysis, the constant-thickness face sheets are usually considered as membrane and the core is assumed to be inextensible but deformable in the thickness direction. The static behavior of variable-thickness, isotropic and homogeneous sandwich beams was successfully studied by employing a constant-thickness theory but allowing stiffnesses to vary in accordance with local thickness variations. It has been recently found in a refined theory that the analyses based on the constant thickness theory locally can lead to significant errors in structural responses if the sandwich beam is thickness-tapered and the cores are deformable in transverse shear. The errors arise mainly from two factors: (1) the transverse shear components of the membrane forces in the face sheets alter the transverse shears carried by the core; and (2) the face-sheet membrane strains arise from transverse shear deformation of the core. In practice the variable thickness may not only exist in core but also in face sheets. The thickness-variations may even be a type of step function. In this case the transverse shear stress in the face sheets and bending stress in the core should be taken into account in the refined theory mentioned. In the present study, energy principles are employed in deriving governing equations for general bending of anisotropic sandwich beams with variable thickness in both face sheets and cores. Solutions to these equations are based on a finite difference scheme. As an example in application, a simply supported thickness-tapered sandwich beam subject to a concentrated load at its center is considered. Let W' be the maximum deflection of the beam in which face sheets are considered as membrane, while W'' is that based on using the modified refined theory. It is found that W' is always larger than W'', however, the magnitude of (W'- W'') appears to be insensitive to the change of the taper of the beam.

Lu, Chu-Ho↗

A statistical survey of the central plasma sheet

We present a statistical analysis of the ion plasma properties and magnetic field of the central plasma sheet at distances from 10 to 23 R(sub E) from the Earth. This study incorporates International Sun-Earth Explorer (ISEE) 1 plasma sheet samples accumulated with the University of Iowa Lepedea plasma analyzer during 1979. Our study of the bulk properties of the ion plasma shows that there is relatively little change as a result of increasing geomagnetic activity. The main macroscopic effect is an increase in plasma temperature. When the transverse profile of the plasma sheet is examined, it is clear that this increase in temperature occurs preferentially at high latitudes. The magnetic field shows an increase in magnitude in the vicinity of the neutral sheet periods of high geomagnetic activity. The radial profiles of the density, temperature, plasma, and magnetic pressures show a gradient in total energy density in the plasma sheet. The convective velocities are systematically directed earthward, and there is a bias toward positive V(sub y) on the duskside of the magnetotail. We infer that particle motion can be attributed to a pressure gradient, combined with steady state convective electric fields. We compute the convective electric fields from our measured bulk velocities, arriving at a pattern similar to that observed at low altitudes. The cross-tail electric field E(sub y) is dominant near the neutral sheet region, but at high latitudes E(sub z) is a major component. Our results suggest that the plasma sheet boundary layer, rather than the central plasma sheet, is a region of diverging electric fields. The picture of the plasma sheet that emerges from our study is that of a stable reservoir of hot plasma in which thermodynamic, rather than dynamic, processes is important.

Huang, C. Y.↗

Fe, O, and C Charge States Associated with Quiescent Versus Active Current Sheets in the Solar Wind

Ulysses MAG data were used to locate the heliospheric current sheet in data from 1991 through 2006. The purpose was to characterize typical charge states for Fe, O, and C in the vicinity of the current sheet and provide insight into the physical sources for these charge states in the corona. A study of He/H around the current sheets has led to a clear distinction between quiescent current sheets at times of low solar activity and active current sheets associated with magnetic clouds (and, presumably, ICMES). It has been shown that high ionization state Fe is produced in the corona in current sheets associated with CMEs through spectroscopic observations of the corona and through in situ detection at Ulysses. Here we show that the ionization state of Fe is typically only enhanced around active current sheets while the ionization states of O and C are commonly enhanced around both quiescent and active current sheets. This is consistent with UV coronal spectroscopy, which has shown that reconnection in current sheets behind CMEs leads to high temperatures not typically seen above quiet streamers.

Suess, S. T.↗

Regional Impacts of Ice Sheet Surface Representation Improvements in an Earth System Model

Ice sheet surface conditions and their subsequent impact on surface mass balance play an important role in ice sheet dynamics and ice sheet interaction with the overlying atmosphere and surrounding ocean. The NASA Global Modeling and Assimilation Office’s (GMAO) Goddard Earth Observing System (GEOS) ecosystem of models and reanalyses model ice sheet and glacier surface mass balance with a moderately complex snow and ice module, including prognostic surface albedo evolution, fractional snow cover, and snowpack hydrology and meltwater retention. With this configuration, Greenland near surface air temperatures and ice sheet melt are well represented in MERRA-2, GMAO’s current atmospheric reanalysis; however, the similarity to observations in some regions is due, in part, to compensating biases in surface energy budget. Recent improvements to GEOS’ cloud microphysics and longwave radiation parameterizations reduced biases in surface net longwave radiation and exacerbated surface net shortwave radiation biases, effectively increasing near surface temperatures and melting, particularly during the summer months. Here, we demonstrate the Earth system response to an improved representation of the ice sheet surface focused on minimizing the surface energy biases and increasing spatial and temporal representativeness. New changes to the surface albedo parameterization, including the introduction of a prognostic aerosol darkening scheme, help mitigate shortwave biases, while modifications to surface roughness characteristics improve near surface sensible heat fluxes. Focusing on the Arctic and Greenland, we examine the combined impact on these changes on regional weather conditions and ice sheet surface mass balance using a high resolution atmospheric only experiment, and we use a coupled model configuration to assess the impact on oceanic conditions and subseasonal-to-seasonal prediction. Overall, these improvements increase modeled ice sheet surface realism and provide a strong basis for more accurate ice sheet mass balance in GMAO’s future reanalyses and forecasting systems.

Lauren C Andrews↗

Regional Impacts of Ice Sheet Surface Representation Improvements in an Earth System Model

Ice sheet surface conditions and their subsequent impact on surface mass balance play an important role in ice sheet dynamics and ice sheet interaction with the overlying atmosphere and surrounding ocean. The NASA Global Modeling and Assimilation Office’s (GMAO) Goddard Earth Observing System (GEOS) ecosystem of models and reanalyses model ice sheet and glacier surface mass balance with a moderately complex snow and ice module, including prognostic surface albedo evolution, fractional snow cover, and snowpack hydrology and meltwater retention. With this configuration, Greenland near surface air temperatures and ice sheet melt are well represented in MERRA-2, GMAO’s current atmospheric reanalysis; however, the similarity to observations in some regions is due, in part, to compensating biases in surface energy budget. Recent improvements to GEOS’ cloud microphysics and longwave radiation parameterizations reduced biases in surface net longwave radiation and exacerbated surface net shortwave radiation biases, effectively increasing near surface temperatures and melting, particularly during the summer months. Here, we demonstrate the Earth system response to an improved representation of the ice sheet surface focused on minimizing the surface energy biases and increasing spatial and temporal representativeness. New changes to the surface albedo parameterization, including the introduction of a prognostic aerosol darkening scheme, help mitigate shortwave biases, while modifications to surface roughness characteristics improve near surface sensible heat fluxes. Focusing on the Arctic and Greenland, we examine the combined impact on these changes on regional weather conditions and ice sheet surface mass balance using a high resolution atmospheric only experiment, and we use a coupled model configuration to assess the impact on oceanic conditions and subseasonal-to-seasonal prediction. Overall, these improvements increase modeled ice sheet surface realism and provide a strong basis for more accurate ice sheet mass balance in GMAO’s future reanalyses and forecasting systems.

Lauren C. Andrews↗

Chemical pumps and flexible sheets spontaneously form self-regulating oscillators in solution

The synchronization of self-oscillating systems is vital to various biological functions, from the coordinated contraction of heart muscle to the self-organization of slime molds. Through modeling, we design bioinspired materials systems that spontaneously form shape-changing self-oscillators, which communicate to synchronize both their temporal and spatial behavior. Here, catalytic reactions at the bottom of a fluid-filled chamber and on mobile, flexible sheets generate the energy to “pump” the surrounding fluid, which also transports the immersed sheets. The sheets exert a force on the fluid that modifies the flow, which in turn affects the shape and movement of the flexible sheets. This feedback enables a single coated (active) and even an uncoated (passive) sheet to undergo self-oscillation, displaying different oscillatory modes with increases in the catalytic reaction rate. Two sheets (active or passive) introduce excluded volume, steric interactions. This distinctive combination of the hydrodynamic, fluid–structure, and steric interactions causes the sheets to form coupled oscillators, whose motion is synchronized in time and space. We develop a heuristic model that rationalizes this behavior. These coupled self-oscillators exhibit rich and tunable phase dynamics, which depends on the sheets’ initial placement, coverage by catalyst and relative size. Moreover, through variations in the reactant concentration, the system can switch between the different oscillatory modes. This breadth of dynamic behavior expands the functionality of the coupled oscillators, enabling soft robots to display a variety of self-sustained, self-regulating moves.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Description and Demonstration of the Coupled Community Earth System Model v2 – Community Ice Sheet Model v2 (CESM2‐CISM2)

Abstract Earth system/ice‐sheet coupling is an area of recent, major Earth System Model (ESM) development. This work occurs at the intersection of glaciology and climate science and is motivated by a need for robust projections of sea‐level rise. The Community Ice Sheet Model version 2 (CISM2) is the newest component model of the Community Earth System Model version 2 (CESM2). This study describes the coupling and novel capabilities of the model, including: (1) an advanced energy‐balance‐based surface mass balance calculation in the land component with downscaling via elevation classes; (2) a closed freshwater budget from ice sheet to the ocean from surface runoff, basal melting, and ice discharge; (3) dynamic land surface types; and (4) dynamic atmospheric topography. The Earth system/ice‐sheet coupling is demonstrated in a simulation with an evolving Greenland Ice Sheet (GrIS) under an idealized high CO 2 scenario. The model simulates a large expansion of ablation areas (where surface ablation exceeds snow accumulation) and a large increase in surface runoff. This results in an elevated freshwater flux to the ocean, as well as thinning of the ice sheet and area retreat. These GrIS changes result in reduced Greenland surface albedo, changes in the sign and magnitude of sensible and latent heat fluxes, and modified surface roughness and overall ice sheet topography. Representation of these couplings between climate and ice sheets is key for the simulation of ice and climate interactions.

Muntjewerf, Laura↗

A planar-sheet nongraphitic zero-bandgap sp 2 carbon phase made by the low-temperature reaction of γ-graphyne

The highest sheet symmetry form of graphyne, with one triple bond between each neighboring hexagon in graphene, irreversibly transforms exothermically at ambient pressure and low temperatures into a nongraphitic, planar-sheet, zero-bandgap phase consisting of intrasheet-bonded sp 2 carbons. The synthesis of this sp 2 carbon phase is demonstrated, and other carbon phases are described for possible future synthesis from graphyne without breaking graphyne bonds. While measurements and theory indicate that the reacting graphyne becomes nonplanar because of sheet wrinkling produced by dimensional mismatch between reacted and nonreacted sheet regions, sheet planarity is regained when the reaction is complete. Although the observed elimination of triple bonds to make parallel planar sp 2 carbon sheets likely requires ordered transformation within each sheet, diffraction data for reacted multisheet stacks indicate that the relative lateral positions of neighboring sheets are disordered, as predicted, since no crystalline diffraction peak (other than for the intersheet spacing) is observed.

Aliev, Ali E. (ORCID:0000000300349707)↗

Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array

Significance: Fluorescence lifetime imaging microscopy (FLIM) of the metabolic co-enzyme nicotinamide adenine dinucleotide (phosphate) [NAD(P)H] is a popular method to monitor single-cell metabolism within unperturbed, living 3D systems. However, FLIM of NAD(P)H has not been performed in a light-sheet geometry, which is advantageous for rapid imaging of cells within live 3D samples. Aim: We aim to design, validate, and demonstrate a proof-of-concept light-sheet system for NAD(P)H FLIM. Approach: A single-photon avalanche diode camera was integrated into a light sheet microscope to achieve optical sectioning and limit out-of-focus contributions for NAD(P)H FLIM of single cells. Results: An NAD(P)H light-sheet FLIM system was built and validated with fluores cence lifetime standards and with time-course imaging of metabolic perturbations in pancreas cancer cells with 10 s integration times. NAD(P)H light-sheet FLIM in vivo was demonstrated with live neutrophil imaging in a larval zebrafish tail wound also with 10 s integration times. Finally, the theoretical and practical imaging speeds for NAD(P)H FLIM were compared across laser scanning and light-sheet geometries, indicating a 30× to 6× acquisition speed advantage for the light sheet compared to the laser scanning geometry. Conclusions: FLIM of NAD(P)H is feasible in a light-sheet geometry and is attrac tive for 3D live cell imaging applications, such as monitoring immune cell metabolism and migration within an organism.

47 OTHER INSTRUMENTATION↗

Capturing the interactions between ice sheets, sea level and the solid Earth on a range of timescales: a new “time window” algorithm

Retreat and advance of ice sheets perturb the gravitational field, solid surface and rotation of the Earth, leading to spatially variable sea-level changes over a range of timescales $\textit{O}$ (10 0–6 years), which in turn feed back onto ice-sheet dynamics. Coupled ice-sheet–sea-level models have been developed to capture the interactive processes between ice sheets, sea level and the solid Earth, but it is computationally challenging to capture short-term interactions $\textit{O}$ (10 0–2 years) precisely within longer $\textit{O}$ (10 3–6 years) simulations. The standard forward sea-level modelling algorithm assigns a uniform temporal resolution in the sea-level model, causing a quadratic increase in total CPU time with the total number of input ice history steps, which increases with either the length or temporal resolution of the simulation. In this study, we introduce a new “time window” algorithm for 1D pseudo-spectral sea-level models based on the normal mode method that enables users to define the temporal resolution at which the ice loading history is captured during different time intervals before the current simulation time. Utilizing the time window, we assign a fine temporal resolution $\textit{O}$ (10 0–2 years) for the period of ongoing and recent history of surface ice and ocean loading changes and a coarser temporal resolution $\textit{O}$ (10 3–6 years) for earlier periods in the simulation. This reduces the total CPU time and memory required per model time step while maintaining the precision of the model results. We explore the sensitivity of sea-level model results to the model temporal resolution and show how this sensitivity feeds back onto ice-sheet dynamics in coupled modelling. We apply the new algorithm to simulate sea-level changes in response to global ice-sheet evolution over two glacial cycles and the rapid collapse of marine sectors of the West Antarctic Ice Sheet in the coming centuries and provide appropriate time window profiles for each application. The time window algorithm reduces the total CPU time by ~ 50 % in each of these examples and changes the trend of the total CPU time increase from quadratic to linear. This improvement would increase with longer simulations than those considered here. Our algorithm also allows for coupling time intervals of annual temporal scale for coupled ice-sheet–sea-level modelling of regions such as West Antarctica that are characterized by rapid solid Earth response to ice changes due to the thin lithosphere and low mantle viscosities.

59 BASIC BIOLOGICAL SCIENCES↗