Infrastructure Awards
Presentation for NUSF Annual Review by DOE-NE
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
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Pat Thiel talks about attending the Nobel Prize Award Ceremony
Pat Thiel, Ames Laboratory senior scientist and Iowa State University Distinguished Professor of Chemistry, was invited to be a guest at the ceremony on December 10th, in Stockholm, Sweden, where Danny Shechtman, Ames Laboratory scientist, received the 2011 Nobel Prize in Chemistry. Following her return to the Lab, Thiel shared some of her recollections of the momentous event.
99 GENERAL AND MISCELLANEOUS↗
Celebration of DOE's 35th Anniversary and the Secretary of Energy's Honor Awards, Keynote Address: Energy Secretary, Dr. Steven Chu
Dr. Steven Chu gives a keynote address marking the thirty-fifth anniversary of the Department of Energy (DOE). He highlights outstanding achievements of the Department and its scientists. Several of the Department's many Nobel Prize winners over the years are mentioned.
35TH ANNIVERSARY↗
2013 R&D 100 Award: New tech could mean more power for fiber lasers
An LLNL team of six physicists has developed a new technology that is a stepping stone to enable some of the limitations on high-power fiber lasers to be overcome. Their technology, dubbed "Efficient Mode-Converters for High-Power Fiber Amplifiers," allows the power of fiber lasers to be increased while maintaining high beam quality. Currently, fiber lasers are used in machining, on factory floors and in a number of defense applications and can produce tens of kilowatts of power.The conventional fiber laser design features a circular core and has fundamental limitations that make it impractical to allow higher laser power unless the core area is increased. LLNL researchers have pioneered a design to increase the laser's core area along the axis of the ribbon fiber. Their design makes it difficult to use a conventional laser beam, so the LLNL team converted the beam into a profile that propagates into the ribbon fiber and is converted back once it is amplified. The use of this LLNL technology will permit the construction of higher power lasers for lower costs and increase the power of fiber lasers from tens of kilowatts of power to about 100 kilowatts and potentially even higher.
36 MATERIALS SCIENCE↗
2016 Edison Patent Award – Princeton Plasma Physics Laboratory
PPPL Medical Isotope Tc-99m Technology
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Editor's Recognition Award for Distinction in Reviewing 2012
No abstract prepared.
62 RADIOLOGY AND NUCLEAR MEDICINE↗
Evaluating the tail of the distribution: the economic contributions of frequently awarded government R&D recipients
Not Available
Feldman, Maryann (ORCID:0000000335527243)↗
2022 Prentice Award Lecture: Advancing Retinal Imaging and Visual Function in Patient Management and Disease Mechanisms
Patient-based research plays a key role in probing basic visual mechanisms. Less-well recognized is the role of patient-based retinal imaging and visual function studies in elucidating disease mechanisms, which are accelerated by advances in imaging and function techniques and are most powerful when combined with the results from histology and animal models. A patient's visual complaints can be one key to patient management, but human data are also key to understanding disease mechanisms. Unfortunately, pathological changes can be difficult to detect. Before advanced retinal imaging, the measurement of visual function indicated the presence of pathological changes that were undetectable with existing clinical examination. Over the past few decades, advances in retinal imaging have increasingly revealed the unseen. This has led to great strides in the management of many diseases, particularly diabetic retinopathy and macular edema, and age-related macular degeneration. It is likely widely accepted that patient-based research, as in clinical trials, led to such positive outcomes. Both visual function measures and advanced retinal imaging have clearly demonstrated differences among retinal diseases. Contrary to initial thinking, sight-threatening damage in diabetes occurs to the outer retina and not only to the inner retina. This has been clearly indicated in patient results but has only gradually entered the clinical classifications and understanding of disease etiology. There is strikingly different pathophysiology for age-related macular degeneration compared with photoreceptor and retinal pigment epithelial genetic defects, yet research models and even some treatments confuse these. It is important to recognize the role that patient-based research plays in probing basic visual mechanisms and elucidating disease mechanisms, combining these findings with the concepts from histology and animal models. Thus, this article combines sample instrumentation from my laboratory and progress in the fields of retinal imaging and visual function.
60 APPLIED LIFE SCIENCES↗
NREL Innovations Contribute to an Award-Winning Small Wind Turbine (Fact Sheet)
The Skystream 3.7 wind turbine is the result of a decade-long collaboration between the National Renewable Energy Laboratory (NREL) and Southwest Windpower, a commercially successful small wind turbine manufacturer. NREL drew heavily on its research experience to incorporate innovations into the Skystream 3.7, including a unique blade design that makes the wind turbine more efficient and quieter than most.
17 WIND ENERGY↗
Final Scientific/Technical Report for DOE Award No. DE-FG02-03ER15426: Role of Arabidopsis PINHEAD gene in meristem function
The shoot apical meristems of land plants are small mounds of hundreds of cells located at the tips of branches. It is from these small clusters of cells that essentially all above ground plant biomass and therefore much of our energy supply originates. Several key genes have been discovered that are necessary for cells in the shoot apical meristem to take on stem cell properties. The goal of this project is to understand how the synthesis and accumulation of the mRNAs and proteins encoded by these genes is controlled. A thorough understanding of the molecules that control the growth of shoot apical meristems in plants will help us to manipulate food, fiber and biofuel crops to better feed, clothe and provide energy for humans.
09 BIOMASS FUELS↗
2013 Presidential Migratory Bird Stewardship Award Submittal to the Council on the Conservation of Migratory Birds
DOE/LLNL understands its environmental stewardship role and responsibilities, including the protection of migratory birds. Strengthening migratory bird conservation activities onsite, following and creating opportunities to exceed avian protection law provisions, and enhancing collaboration between DOE and the U.S. Fish and Wildlife Service (FWS), has been a goal at DOE/LLNL. Using an environmental management system approach that conforms to the ISO 14001:2004 International Standard, DOE/LLNL incorporates all applicable environmental laws and regulations into its mission activities.
54 ENVIRONMENTAL SCIENCES↗
Award ER25844: Minimizing System Noise Effects for Extreme-Scale Scientific Simulation Through Function Delegation
In software running on distributed computing clusters, time spent on communication between nodes in the cluster can be a significant portion of the overall computation time; background operating system tasks and other computational noise on the nodes of the system can have a significant impact on the amount of time this communication takes, especially on large systems. The research completed in this period has improved understanding of when such noise will have a significant impact. Specifically, it was demonstrated that not just noise on the nodes, but also noise on the network between nodes can have a significant impact on computation time. It was also demonstrated that noise patterns matter more than noise intensity: very regular noise can cause less disruption than lighter (on average) but less regular noise. It was also demonstrated that the effect of noise is more prominent as the speed of the network between nodes is increased. Furthermore, a tracing tool, Netgauge, was improved via our work, and a system simulator, LogGOPSim, was developed; they can be used by application developers to improve performance of their program and by system designers to mitigate the effects of noise by adjusting the noise characteristics of the operating system. Both have been made freely available as open source programs. In the course of developing these tools, we demonstrated weaknesses in existing methodologies for modeling communication, and we introduced a more detailed model, LogGOPS, for simulating systems. Not only were the deleterious effects of noise explored but we have also offered solutions. Our studies of simulations of system noise have led to specific recommendations on tuning systems to mitigate noise. We have also improved existing approaches to mitigating noise. Non-blocking collective communication avoids the effects of noise by letting communication continue simultaneously with computation (thus being non-blocking), so that the delays in communication introduced by noise have a smaller impact on overall computation time. Potentially, noise can be reduced much further by offloading communication tasks to a separate processing element than the operating system is using. We have improved our library LibNBC, which provides an implementation of non-blocking collectives, via this work. During this research, our proposal to include non-blocking collectives (which used LibNBC as a reference implementation) in the upcoming MPI-3 standard was accepted. As MPI is a ubiquitous and important standard for communication in parallel computing, this demonstrates a certain acceptance of the practicality and desirability of non-blocking collectives. Now that non-blocking collectives are a part of the standard we can expect to see optimized platform-specific implementations of non-blocking collectives. Also as part of this work we have also developed a language GOAL (Global Operation Assembly Language) that can be used as a starting point for defining languages to express optimized communication algorithms.
97 MATHEMATICS AND COMPUTING↗
NNSA Pollution Prevention Awards Nominations for 2013
Abstract Not Provided.
54 ENVIRONMENTAL SCIENCES↗
FAST: A Fast Full System Cycle Accurate Computer Simulator (Early Career Principal Investigator Award Final Report)
This project is researching FAST, a methodology to build very fast, cycle-accurate full system computer simulators and building the first set of such simulators and the first set of tools to help construct those simulators. The methodology relies on a functional model that is a fast, full-system but not cycle-accurate simulator coupled with a timing model that is models the micro-architectural structure and arbitration of a computer system, but not its functionality. The way FAST simulators differ from other simulators partitioned in the same way is that the interface between the functional and timing model is optimized to minimize the need for round-trip communication. The optimized communication enables FAST timing models to be implemented in an FPGA and the functional model in software while still achieving extremely high performance. Our general strategy is to design a methodology and then prototype an example using that methodology to ensure the methodology is sound before committing to it. This strategy ensures that the selected methodology has been tested and provides an early example of the output of that methodology.
97 MATHEMATICS AND COMPUTING↗
Final scientific report for DOE award title: Improving the Representation of Ice Sedimentation Rates in Global Climate Models
It is well known that cirrus clouds play a major role in regulating the earth’s climate, but the details of how this works are just beginning to be understood. This project targeted the main property of cirrus clouds that influence climate processes; the ice fall speed. That is, this project improves the representation of the mass-weighted ice particle fall velocity, V m , in climate models, used to predict future climate on global and regional scales. Prior to 2007, the dominant sizes of ice particles in cirrus clouds were poorly understood, making it virtually impossible to predict how cirrus clouds interact with sunlight and thermal radiation. Due to several studies investigating the performance of optical probes used to measure the ice particle size distribution (PSD), as well as the remote sensing results from our last ARM project, it is now well established that the anomalously high concentrations of small ice crystals often reported prior to 2007 were measurement artifacts. Advances in the design and data processing of optical probes have greatly reduced these ice artifacts that resulted from the shattering of ice particles on the probe tips and/or inlet tube, and PSD measurements from one of these improved probes (the 2-dimensional Stereo or 2D-S probe) are utilized in this project to parameterize V m for climate models. Our original plan in the proposal was to parameterize the ice PSD (in terms of temperature and ice water content) and ice particle mass and projected area (in terms of mass- and area-dimensional power laws or m-D/A-D expressions) since these are the microphysical properties that determine V m , and then proceed to calculate V m from these parameterized properties. But the 2D-S probe directly measures ice particle projected area and indirectly estimates ice particle mass for each size bin. It soon became apparent that the original plan would introduce more uncertainty in the V m calculations than simply using the 2D-S measurements to directly calculate V m . By calculating V m directly from the measured PSD, ice particle projected area and estimated mass, more accurate estimates of V m are obtained. These V m values were then parameterized for climate models by relating them to (1) sampling temperature and ice water content (IWC) and (2) the effective diameter (D e ) of the ice PSD. Parameterization (1) is appropriate for climate models having single-moment microphysical schemes whereas (2) is appropriate for double-moment microphysical schemes and yields more accurate V m estimates. These parameterizations were developed for tropical cirrus clouds, Arctic cirrus, mid-latitude synoptic cirrus and mid-latitude anvil cirrus clouds based on field campaigns in these regions. An important but unexpected result of this research was the discovery of microphysical evidence indicating the mechanisms by which ice crystals are produced in cirrus clouds. This evidence, derived from PSD measurements, indicates that homogeneous freezing ice nucleation dominates in mid-latitude synoptic cirrus clouds, whereas heterogeneous ice nucleation processes dominate in mid-latitude anvil cirrus. Based on these findings, D e was parameterized in terms of temperature (T) for conditions dominated by (1) homo- and (2) heterogeneous ice nucleation. From this, an experiment was designed for global climate models (GCMs). The net radiative forcing from cirrus clouds may be affected by the means ice is produced (homo- or heterogeneously), and this net forcing contributes to climate sensitivity (i.e. the change in mean global surface temperature resulting from a doubling of CO 2 ). The objective of this GCM experiment was to determine how a change in ice nucleation mode affects the predicted global radiation balance. In the first simulation (Run 1), the D e -T relationship for homogeneous nucleation is used at all latitudes, while in the second simulation (Run 2), the D e -T relationship for heterogeneous nucleation is used at all latitudes. For both runs, V m is calculated from D e . Two GCMs were used; the Community Atmosphere Model version 5 (CAM5) and a European GCM known as ECHAM5 (thanks to our European colleagues who collaborated with us). Similar results were obtained from both GCMs in the Northern Hemisphere mid-latitudes, with a net cooling of ~ 1.0 W m -2 due to heterogeneous nucleation, relative to Run 1. The mean global net cooling was 2.4 W m -2 for the ECHAM5 GCM while CAM5 produced a mean global net cooling of about 0.8 W m -2 . This dependence of the radiation balance on nucleation mode is substantial when one considers the direct radiative forcing from a CO 2 doubling is 4 W m -2 . The differences between GCMs in mean global net cooling estimates may demonstrate a need for improving the representation of cirrus clouds in GCMs, including the coupling between microphysical and radiative properties. Unfortunately, after completing this GCM experiment, we learned from the company that provided the 2D-S microphysical data that the data was corrupted due to a computer program coding problem. Therefore the microphysical data had to be reprocessed and reanalyzed, and the GCM experiments were redone under our current ASR project but using an improved experimental design.
54 ENVIRONMENTAL SCIENCES↗
Award ER25750: Coordinated Infrastructure for Fault Tolerance Systems Indiana University Final Report
The main purpose of the Coordinated Infrastructure for Fault Tolerance in Systems initiative has been to conduct research with a goal of providing end-to-end fault tolerance on a systemwide basis for applications and other system software. While fault tolerance has been an integral part of most high-performance computing (HPC) system software developed over the past decade, it has been treated mostly as a collection of isolated stovepipes. Visibility and response to faults has typically been limited to the particular hardware and software subsystems in which they are initially observed. Little fault information is shared across subsystems, allowing little flexibility or control on a system-wide basis, making it practically impossible to provide cohesive end-to-end fault tolerance in support of scientific applications. As an example, consider faults such as communication link failures that can be seen by a network library but are not directly visible to the job scheduler, or consider faults related to node failures that can be detected by system monitoring software but are not inherently visible to the resource manager. If information about such faults could be shared by the network libraries or monitoring software, then other system software, such as a resource manager or job scheduler, could ensure that failed nodes or failed network links were excluded from further job allocations and that further diagnosis could be performed. As a founding member and one of the lead developers of the Open MPI project, our efforts over the course of this project have been focused on making Open MPI more robust to failures by supporting various fault tolerance techniques, and using fault information exchange and coordination between MPI and the HPC system software stack from the application, numeric libraries, and programming language runtime to other common system components such as jobs schedulers, resource managers, and monitoring tools.
97 MATHEMATICS AND COMPUTING↗
Advanced Seismic Data Analysis Program (The Hot Pot Project), DOE Award: DE-EE0002839 (Phase 1 Report)
A five-line (23 mile) reflection- seismic survey was conducted at the Hot Pot geothermal prospect area in north-central Nevada under the USDOE (United States Department of Energy) Geothermal Technologies Program. The project objective was to utilize innovative seismic data processing, integrated with existing geological, geophysical and geochemical information, to identify high-potential drilling targets and to reduce drilling risk. Data acquisition and interpretation took place between October 2010 and April 2011. The first round of data processing resulted in large areas of relatively poor data, and obvious reflectors known from existing subsurface information either did not appear on the seismic profiles or appeared at the wrong depth. To resolve these issues, the velocity model was adjusted to include geologic input, and the lines were reprocessed. The resulting products were significantly improved, and additional detail was recovered within the high-velocity and in part acoustically isotropic basement. Features visible on the improved seismic images include interpreted low angle thrust faults within the Paleozoic Valmy Formation, which potentially are reactivated in the current stress field. Intermediate-depth wells are currently targeted to test these features. The seismic images also suggest the existence of Paleogene sedimentary and volcanic rocks which potentially may function as a near-surface reservoir, charged by deeper structures in Paleozoic rocks.
15 GEOTHERMAL ENERGY↗
Final Report for Award DE-FG02-09ER16008
The research objectives of this project was to characterize the factors that regulate the pattern, amount and quality of cellulose deposition in higher plants. We pursued this goal in four ways: (1) by searching for proteins that interact with the cellulose synthase complex using novel bioinformatics tools to identify genes which exhibit gene expression patterns that are highly correlated with cellulose synthase components, (2) by using cellulose synthase domains as bait in 2-hybrid screens, and then characterizing any proteins that are identified by both gene expression network analysis and 2-hybrid screens (3) by testing the function of all known post-translational modifications, (4) by identifying and characterizing kinases that carry out most of the known post-translational modification of cellulose synthase components.
59 BASIC BIOLOGICAL SCIENCES↗