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At least 1,243 records · Page 69

Bioenergy sorghum’s deep roots: A key to sustainable biomass production on annual cropland

Abstract Bioenergy sorghum has high biomass yield potential, drought resilience, good nitrogen use efficiency, and a root system that contributes to the accumulation of soil organic carbon. In this study, field grown bioenergy sorghum root systems were analyzed during the growing season to characterize their depth, biomass, morphology, anatomy, and gene expression profiles. Bioenergy sorghum roots grew continuously during a 155‐day growing season producing ~175 nodal roots, accumulating ~7 Mg of dry biomass per hectare, and reaching >2 m deep in the soil profile. Nodal roots within 20 cm of the stem were 1–5 mm in diameter, whereas roots deeper in soil profiles were enriched in lateral roots with small diameters (~30–500 µm) enabling growth through soil macropores. In older field‐grown plants, roots with intact endodermal, vascular and inner root tissues were surrounded by degraded or aerenchyma‐filled epidermal and cortical cell layers. Transcriptome analysis of nodal, surface, and deep roots identified >2,500 differentially expressed genes involved in root growth, transport, adaptation, defense, and AMF–root interaction. Deep roots (180–240 cm) differentially expressed genes that regulate lateral root growth. Surface roots (0–20 cm) located mid‐row differentially expressed genes involved in nitrate transport, whereas ammonium transport genes were expressed in surface and deep roots and genes involved in phosphate transport were expressed in nodal, surface, and deep roots. Overall, bioenergy sorghum's long growing season enables root systems to grow deeper and accumulate more biomass than annual grain crops such as maize, attributes that could help restore annual cropland soil organic carbon levels and improve soil productivity. Deep roots active in nutrient transport are positioned to take‐up fertilizer leached deep into soil profiles mitigating potential nutrient run‐off. Bioenergy sorghum's large and deep root system is a key to sustainable production of biofuels, biopower, and bioproducts on annual cropland.

59 BASIC BIOLOGICAL SCIENCES↗

Learning the solution operator of parametric partial differential equations with physics-informed DeepONets

Partial differential equations (PDEs) play a central role in the mathematical analysis and modeling of complex dynamic processes across all corners of science and engineering. Their solution often requires laborious analytical or computational tools, associated with a cost that is markedly amplified when different scenarios need to be investigated, for example, corresponding to different initial or boundary conditions, different inputs, etc. In this work, we introduce physics-informed DeepONets, a deep learning framework for learning the solution operator of arbitrary PDEs, even in the absence of any paired input-output training data. We illustrate the effectiveness of the proposed framework in rapidly predicting the solution of various types of parametric PDEs up to three orders of magnitude faster compared to conventional PDE solvers, setting a previously unexplored paradigm for modeling and simulation of nonlinear and nonequilibrium processes in science and engineering.

97 MATHEMATICS AND COMPUTING↗

Constructing Neural Network Based Models for Simulating Dynamical Systems

Dynamical systems see widespread use in natural sciences like physics, biology, and chemistry, as well as engineering disciplines such as circuit analysis, computational fluid dynamics, and control. For simple systems, the differential equations governing the dynamics can be derived by applying fundamental physical laws. However, for more complex systems, this approach becomes exceedingly difficult. Data-driven modeling is an alternative paradigm that seeks to learn an approximation of the dynamics of a system using observations of the true system. In recent years, there has been an increased interest in applying data-driven modeling techniques to solve a wide range of problems in physics and engineering. Here this article provides a survey of the different ways to construct models of dynamical systems using neural networks. In addition to the basic overview, we review the related literature and outline the most significant challenges from numerical simulations that this modeling paradigm must overcome. Based on the reviewed literature and identified challenges, we provide a discussion on promising research areas.

97 MATHEMATICS AND COMPUTING↗

Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction

Abstract Background Plant cell walls are interwoven structures recalcitrant to degradation. Native and adapted microbiomes can be particularly effective at plant cell wall deconstruction. Although most understanding of biological cell wall deconstruction has been obtained from isolates, cultivated microbiomes that break down cell walls have emerged as new sources for biotechnologically relevant microbes and enzymes. These microbiomes provide a unique resource to identify key interacting functional microbial groups and to guide the design of specialized synthetic microbial communities. Results To establish a system assessing comparative microbiome performance, parallel microbiomes were cultivated on sorghum ( Sorghum bicolor L. Moench) from compost inocula. Biomass loss and biochemical assays indicated that these microbiomes diverged in their ability to deconstruct biomass. Network reconstructions from gene expression dynamics identified key groups and potential interactions within the adapted sorghum-degrading communities, including Actinotalea , Filomicrobium , and Gemmatimonadetes populations. Functional analysis demonstrated that the microbiomes proceeded through successive stages that are linked to enzymes that deconstruct plant cell wall polymers. The combination of network and functional analysis highlighted the importance of cellulose-degrading Actinobacteria in differentiating the performance of these microbiomes. Conclusions The two-tier cultivation of compost-derived microbiomes on sorghum led to the establishment of microbiomes for which community structure and performance could be assessed. The work reinforces the observation that subtle differences in community composition and the genomic content of strains may lead to significant differences in community performance.

59 BASIC BIOLOGICAL SCIENCES↗

Developing Cost Effective Biological Removal Technology for Selenium and Nitrate from Flue Gas Desulfurization Wastewater from an Existing Power Facility

Funding from this project supported new research in environmental biotechnology at WVSU Energy and Environmental Science Institute (WVSUEESI) to develop biological treatment techniques for FGD wastewater using photosynthetic organisms algae and plants. We tested the possibility of using algae and plants in treating FGD wastewater. Results suggested that algae and plants could able to perform normal photosynthesis under low concentrations of selenium. However, higher concentrations of selenium are lethal on photosynthesis. The total protein data indicated that FGD wastewater induced the accumulation of complete proteins in the duckweeds compared to control plants. It appears that nitrate, nitrates, and other compounds in FGD wastewater promote total protein accumulation. The FGD wastewater treatment has triggered Triacylglycerols (TAG) and carbohydrate accumulation in duckweed. We studied the differential gene expression using RNA-Sequencing data. Gene expression analysis revealed that glycolysis, fatty acid, triacylglycerol biosynthesis, and starch degradation were up-regulated; on the contrary, gluconeogenesis, photosynthesis, and starch biosynthesis genes were down-regulated by FGD wastewater treatment. We confirmed the expression of some of these genes using q-RT PCR analysis. We demonstrated that when FGD gypsum was blended with the coal mine soil to grow the bioenergy crop, Camelina, it could grow and produce seed. Moreover, Camelina is a non-edible oilseed crop and has heavy metal sequestering properties, making it the right reclamation choice. Besides, this project provided the opportunity for WVSU undergraduates to integrate hands-on research and education. Funding from this grant helped us to enhance student hands-on experience in water quality and environmental science and participation in STEM research and education.

09 BIOMASS FUELS↗

Interaction of Concentrated (68%) Aqueous Nitric Acid Solutions with Cheesecloth: A TGA-DSC-MS Study

The exposure of cotton cheesecloth to concentrated aqueous solutions of nitric acid reduced the onset of combustion by 30-40°C (from ~350°C to ~310°C) relative to that of both unexposed cheesecloth and cheesecloth that was rinsed immediately following exposure to the same solution. Cheesecloth exposed to concentrated (68%) nitric acid underwent three exothermic pre-combustion reactions which onset at 125-135°C, 160- 170°C and 200-210°C. These reactions give off mostly water vapor, with lesser amounts of NO and carbon dioxide. Exposure to concentrated nitric acid damages the cellulose polymers, oxidizing them, reducing them in length, and increasing their reactivity in response to thermal stress. Cheesecloth which was rinsed after exposure behaved similarly to unexposed cheesecloth, indicating that NC was not formed on exposure to the concentrated aqueous nitric acid solution. The addition of a 239Pu – 241Am spike in an aqueous nitric – hydrofluoric solution to the cheesecloth reduced the onset temperature of the first exothermic reaction to 126°C and lowered the onset temperature of combustion from ~310°C to ~275°C. When dried on to cellulose substrates in the presence of excess nitrate, metal ions may act as oxidizers, or may catalyze the oxidation of the carbonaceous material, lowering ignition temperatures. No evidence for the formation of nitrocellulose following the exposure of cheesecloth to nitric acid was observed during this study

36 MATERIALS SCIENCE↗

Nonzero-sum differential games.

Differential games theory with nonzero sum for application to economic analysis, discussing Nash equilibrium, minimax and noninferior strategies set

Ho, Y. C.↗

Matrix Perturbation Techniques in Structural Dynamics

Matrix perturbation are developed techniques which can be used in the dynamical analysis of structures where the range of numerical values in the matrices extreme or where the nature of the damping matrix requires that complex valued eigenvalues and eigenvectors be used. The techniques can be advantageously used in a variety of fields such as earthquake engineering, ocean engineering, aerospace engineering and other fields concerned with the dynamical analysis of large complex structures or systems of second order differential equations. A number of simple examples are included to illustrate the techniques.

Caughey, T. K.↗

Propagation of transients in a random medium

The propagation of transient scalar waves in a three-dimensional random medium is considered. The analysis is based on the smoothing method. An integro-differential equation for the coherent (or average) wave is derived and solved for the case of a statistically homogeneous and isotropic medium and a delta-function source. This yields the coherent Green's function of the medium. It is found that the waveform of the coherent wave depends generally on the distance from the source measured in terms of a certain dimensionless parameter. Based on the magnitude of this parameter, three propagation zones, called the near zone, the far zone, and the intermediate zone, are defined.

Wenzel, A. R.↗

Differential absorption and scattering sensitivity predictions

A set of general equations for evaluating the sensitivity of the Differential Absorption and Scattering (DAS) technique based upon a conventional analysis of statistical errors is derived. The equations are put in a proper form for evaluating total column density and range resolved concentration measurements of a variety of atmospheric species. The derived equation are subsequently used to analyze the sensitivity of DAS in three specific applications assuming realistic parameters for the optical and electronic components of proposed DAS systems. The three DAS applications evaluated are: (1) measurement of nitrogen at ground levels over a horizontal path; (2) measurement of atmospheric ozone depletion in the wake of a jet engine at 20 km altitude; and (3) measurements of the ozone distribution in the atmosphere from an orbiting space platform, in a downward viewing mode. The results of this study have shown that with reasonable laser energy and telescope receiver dimensions, DAS is capable of meeting requirements for performing these measurements.

Thompson, R. T., Jr.↗

Thermomechanical coupling in fatigue fracture of viscoelastic materials

Subcritical crack growth in a linear viscoelastic material subjected to cyclic loading is investigated starting with the thermodynamic power balance. Physically, it is supposed that the subcritical slow crack growth is due to local weakening of the material in the neighborhood of the crack tip. Under fatigue loading it is assumed that all energy dissipation goes into heat and that this heat build-up is the dominant irreversible process governing crack growth. The cycle averaged temperature distribution around the crack tip is obtained from local application of the first law of thermodynamics (i.e., conservation of energy). The analysis leads to the solution of a nonlinear integro-differential equation for crack length as a function of time which is coupled with the local energy equation. A regular perturbation technique is used to obtain an analytical solution which compares very well with experimental results.

Hufferd, W. L.↗

A comparison of the two NASTRAN differential stiffness techniques

NASTRAN contains two techniques to solve the differential stiffness problems. One is incorporated in a new static analysis rigid format and the other is contained in a new normal modes analysis rigid format. The two techniques relative to computational accuracy and time of execution are compared.

Mcdonough, J. R.↗