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At least 1,243 records · Page 69

Effect of deposition rate on microstructure and mechanical properties of 17-4 PH stainless steel fabricated by laser engineered net shaping

Laser engineered net shaping (LENS) is an additive manufacturing technique for fabricating and repairing metallic components. However, the relationships between its process parameters and the resulting mechanical properties of alloys such as 17-4 precipitation-hardening (PH) stainless steel require further investigation to enable reliable application. This study examines the specific effect of LENS deposition rate on the microstructure and mechanical properties of 17-4 PH stainless steel. Specimens were fabricated at two different deposition rates (8.47 and 9.31 mm s−1), subjected to subsequent solution and H900 aging treatment, and then evaluated via tensile testing, hardness measurements, and microscopy. A higher deposition rate results in a finer grain structure but increased porosity, leading to greater ultimate tensile strength (∼1294 MPa) yet lower ductility (strain at failure ∼5.8%) compared to the slower deposition rate (∼1266 MPa, ∼9.0% strain). Hardness follows the same trend as tensile strength. Tensile fracture surfaces for both conditions exhibited a mixed mode of ductile dimples and brittle quasi-cleavage regions, with chromium/silicon oxide particles identified within dimples. Complementary finite element modeling indicates that small void fractions primarily reduce ductility by enhancing localized plasticity, with only a marginal decrease in tensile strength. These integrated experimental and numerical results elucidate the mechanical properties linked to deposition rate, providing insight into tailoring LENS processes to achieve desired properties of 17-4 PH stainless steel.

17-4 PH stainlesssteel↗

Biochemical and physiological flexibility accompanies reduced cellulose biosynthesis in Brachypodium cesa1 S830N

Here, we present a study into the mechanisms of primary cell wall cellulose formation in grasses, using the model cereal grass Brachypodium distachyon. The exon found adjacent to the BdCESA1 glycosyltransferase QXXRW motif was targeted using Targeting Induced Local Lesions in Genomes (TILLING) and sequencing candidate amplicons in multiple parallel reactions (SCAMPRing) leading to the identification of the Bdcesa1 S830N allele. Plants carrying this missense mutation exhibited a significant reduction in crystalline cellulose content in tissues that rely on the primary cell wall for biomechanical support. However, Bdcesa1 S830N plants failed to exhibit the predicted reduction in plant height. In a mechanism unavailable to eudicotyledons, B. distachyon plants homozygous for the Bdcesa1 S830N allele appear to overcome the loss of internode expansion anatomically by increasing the number of nodes along the stem. Stem biomechanics were resultantly compromised in Bdcesa1 S830N . The Bdcesa1 S830N missense mutation did not interfere with BdCESA1 gene expression. However, molecular dynamic simulations of the CELLULOSE SYNTHASE A (CESA) structure with modelled membrane interactions illustrated that Bdcesa1 S830N exhibited structural changes in the translated gene product responsible for reduced cellulose biosynthesis. Molecular dynamic simulations showed that substituting S830N resulted in a stabilizing shift in the flexibility of the class specific region arm of the core catalytic domain of CESA, revealing the importance of this motion to protein function.

59 BASIC BIOLOGICAL SCIENCES↗

RCSB Protein Data Bank 1D tools and services

Abstract Motivation Interoperability between polymer sequences and structural data is essential for providing a complete picture of protein and gene features and helping to understand biomolecular function. Results Herein, we present two resources designed to improve interoperability between the RCSB Protein Data Bank, the NCBI and the UniProtKB data resources and visualize integrated data therefrom. The underlying tools provide a flexible means of mapping between the different coordinate spaces and an interactive tool allows convenient visualization of the 1-dimensional data over the web. Availabilityand implementation https://1d-coordinates.rcsb.org and https://rcsb.github.io/rcsb-saguaro. Supplementary information Supplementary data are available at Bioinformatics online.

59 BASIC BIOLOGICAL SCIENCES↗

RCSB Protein Data Bank: improved annotation, search and visualization of membrane protein structures archived in the PDB

Abstract Motivation Membrane proteins are encoded by approximately one fifth of human genes but account for more than half of all US FDA approved drug targets. Thanks to new technological advances, the number of membrane proteins archived in the PDB is growing rapidly. However, automatic identification of membrane proteins or inference of membrane location is not a trivial task. Results We present recent improvements to the RCSB Protein Data Bank web portal (RCSB PDB, rcsb.org) that provide a wealth of new membrane protein annotations integrated from four external resources: OPM, PDBTM, MemProtMD and mpstruc. We have substantially enhanced the presentation of data on membrane proteins. The number of membrane proteins with annotations available on rcsb.org was increased by ∼80%. Users can search for these annotations, explore corresponding tree hierarchies, display membrane segments at the 1D amino acid sequence level, and visualize the predicted location of the membrane layer in 3D. Availability and implementation Annotations, search, tree data and visualization are available at our rcsb.org web portal. Membrane visualization is supported by the open-source Mol* viewer (molstar.org and github.com/molstar/molstar). Supplementary information Supplementary data are available at Bioinformatics online.

59 BASIC BIOLOGICAL SCIENCES↗

RCSB Protein Data Bank 1D3D module: displaying positional features on macromolecular assemblies

Mapping positional features from one-dimensional (1D) sequences onto three-dimensional (3D) structures of biological macromolecules is a powerful tool to show geometric patterns of biochemical annotations and provide a better understanding of the mechanisms underpinning protein and nucleic acid function at the atomic level. We present a new library designed to display fully customizable interactive views between 1D positional features of protein and/or nucleic acid sequences and their 3D structures as isolated chains or components of macromolecular assemblies.

59 BASIC BIOLOGICAL SCIENCES↗

RCSB PDB Mobile : iOS and Android mobile apps to provide data access and visualization to the RCSB Protein Data Bank

The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) resource provides tools for query, analysis and visualization of the 3D structures in the PDB archive. As the mobile Web is starting to surpass desktop and laptop usage, scientists and educators are beginning to integrate mobile devices into their research and teaching. In response, we have developed the RCSB PDB Mobile app for the iOS and Android mobile platforms to enable fast and convenient access to RCSB PDB data and services. Lastly, using the app, users from the general public to expert researchers can quickly search and visualize biomolecules, and add personal annotations via the RCSB PDB's integrated MyPDB service.

59 BASIC BIOLOGICAL SCIENCES↗

Immunological Correlates of the HIV-1 Replication-Competent Reservoir Size

Understanding what shapes the latent human immunodeficiency virus type 1 (HIV-1) reservoir is critical for developing strategies for cure. Here, we measured frequency of persistent HIV-1 infection after 5 years of suppressive antiretroviral therapy initiated during chronic infection. Pretreatment CD8 + T-cell activation, nadir CD4 count, and CD4:CD8 ratio predicted reservoir size.

60 APPLIED LIFE SCIENCES↗

Bacterial biofilm formation on the hyphae of ectomycorrhizal fungi: a widespread ability under controls?

Here, ectomycorrhizal (ECM) fungi establish symbiosis with roots of most trees of boreal and temperate ecosystems and are major drivers of nutrient fluxes between trees and the soil. ECM fungi constantly interact with bacteria all along their life cycle and the extended networks of hyphae provide a habitat for complex bacterial communities. Despite the important effects these bacteria can have on the growth and activities of ECM fungi, little is known about the mechanisms by which these microorganisms interact. Here we investigated the ability of bacteria to form biofilm on the hyphae of the ECM fungus Laccaria bicolor . We showed that the ability to form biofilms on the hyphae of the ECM fungus is widely shared among soil bacteria. Conversely, some fungi, belonging to the Ascomycete class, did not allow for the formation of bacterial biofilms on their surfaces. The formation of biofilms was also modulated by the presence of tree roots and ectomycorrhizae, suggesting that biofilm formation does not occur randomly in soil but that it is regulated by several biotic factors. In addition, our study demonstrated that the formation of bacterial biofilm on fungal hyphae relies on the production of networks of filaments made of extracellular DNA.

59 BASIC BIOLOGICAL SCIENCES↗

Rates and delay times of type Ia supernovae in the Dark Energy Survey

We use a sample of 809 photometrically classified Type Ia supernovae (SNe Ia) discovered by the Dark Energy Survey (DES) along with 40 415 field galaxies to calculate the rate of SNe Ia per galaxy in the redshift range 0.2 < z < 0.6. We recover the known correlation between SN Ia rate and galaxy stellar mass across a broad range of scales 8.5 ≤ log (M*/M ⊙ ) ≤ 11.25. We find that the SN Ia rate increases with stellar mass as a power law with index 0.63 ± 0.02, which is consistent with the previous work. We use an empirical model of stellar mass assembly to estimate the average star formation histories (SFHs) of galaxies across the stellar mass range of our measurement. Combining the modelled SFHs with the SN Ia rates to estimate constraints on the SN Ia delay time distribution (DTD), we find that the data are fit well by a power-law DTD with slope index β = –1.13 ± 0.05 and normalization A = 2.11 ± 0.05 × 10 –13 SNe M ⊙ –1 yr –1 , which corresponds to an overall SN Ia production efficiency N Ia /M * = 0.9 $^{+4.0}_{–0.7}$ × 10 –3 SNe M$^{–1}_{⊙}$. Upon splitting the SN sample by properties of the light curves, we find a strong dependence on DTD slope with the SN decline rate, with slower-declining SNe exhibiting a steeper DTD slope. We interpret this as a result of a relationship between intrinsic luminosity and progenitor age, and explore the implications of the result in the context of SN Ia progenitors.

79 ASTRONOMY AND ASTROPHYSICS↗

TOI-431/HIP 26013: a super-Earth and a sub-Neptune transiting a bright, early K dwarf, with a third RV planet

ABSTRACT We present the bright (Vmag = 9.12), multiplanet system TOI-431, characterized with photometry and radial velocities (RVs). We estimate the stellar rotation period to be 30.5 ± 0.7 d using archival photometry and RVs. Transiting Exoplanet Survey Satellite (TESS) objects of Interest (TOI)-431 b is a super-Earth with a period of 0.49 d, a radius of 1.28 ± 0.04 R⊕, a mass of 3.07 ± 0.35 M⊕, and a density of 8.0 ± 1.0 g cm−3; TOI-431 d is a sub-Neptune with a period of 12.46 d, a radius of 3.29 ± 0.09 R⊕, a mass of $9.90^{+1.53}_{-1.49}$ M⊕, and a density of 1.36 ± 0.25 g cm−3. We find a third planet, TOI-431 c, in the High Accuracy Radial velocity Planet Searcher RV data, but it is not seen to transit in the TESS light curves. It has an Msin i of $2.83^{+0.41}_{-0.34}$ M⊕, and a period of 4.85 d. TOI-431 d likely has an extended atmosphere and is one of the most well-suited TESS discoveries for atmospheric characterization, while the super-Earth TOI-431 b may be a stripped core. These planets straddle the radius gap, presenting an interesting case-study for atmospheric evolution, and TOI-431 b is a prime TESS discovery for the study of rocky planet phase curves.

Osborn, Ares↗

A galaxy-driven model of type Ia supernova luminosity variations

ABSTRACT Type Ia supernovae (SNe Ia) are used as standardizable candles to measure cosmological distances, but differences remain in their corrected luminosities which display a magnitude step as a function of host galaxy properties such as stellar mass and rest-frame U−R colour. Identifying the cause of these steps is key to cosmological analyses and provides insight into SN physics. Here we investigate the effects of SN progenitor ages on their light-curve properties using a galaxy-based forward model that we compare to the Dark Energy Survey 5-yr SN Ia sample. We trace SN Ia progenitors through time and draw their light-curve width parameters from a bimodal distribution according to their age. We find that an intrinsic luminosity difference between SNe of different ages cannot explain the observed trend between step size and SN colour. The data split by stellar mass are better reproduced by following recent work implementing a step in total-to-selective dust extinction ratio (RV) between low- and high-mass hosts, although an additional intrinsic luminosity step is still required to explain the data split by host galaxy U−R. Modelling the RV step as a function of galaxy age provides a better match overall. Additional age versus luminosity steps marginally improve the match to the data, although most of the step is absorbed by the width versus luminosity coefficient α. Furthermore, we find no evidence that α varies with SN age.

79 ASTRONOMY AND ASTROPHYSICS↗

Constraining RV variation using highly reddened Type Ia supernovae from the Pantheon+ sample

ABSTRACT Type Ia supernovae (SNe Ia) are powerful tools for measuring the expansion history of the Universe, but the impact of dust around SNe Ia remains unknown and is a critical systematic uncertainty. One way to improve our empirical description of dust is to analyse highly reddened SNe Ia [E(B − V) > 0.4, roughly equivalent to the fitted SALT2 light-curve parameter c > 0.3]. With the recently released Pantheon+ sample, there are 57 SNe Ia that were removed because of their high colour alone (with colours up to c = 1.61), which can provide enormous leverage on understanding line-of-sight RV. Previous studies have claimed that RV decreases with redder colour, though it is unclear if this is due to limited statistics, selection effects, or an alternative explanation. To test this claim, we fit two separate colour–luminosity relationships, one for the main cosmological sample (c < 0.3) and one for highly reddened (c > 0.3) SNe Ia. We find the change in the colour–luminosity coefficient to be consistent with zero. Additionally, we compare the data to simulations with different colour models, and find that the data prefers a model with a flat dependence of RV on colour over a declining dependence. Finally, our results strongly support that line-of-sight RV to SNe Ia is not a single value, but forms a distribution.

79 ASTRONOMY AND ASTROPHYSICS↗

The Dark Energy Survey Supernova Program results: type Ia supernova brightness correlates with host galaxy dust

ABSTRACT Cosmological analyses with type Ia supernovae (SNe Ia) often assume a single empirical relation between colour and luminosity (β) and do not account for varying host-galaxy dust properties. However, from studies of dust in large samples of galaxies, it is known that dust attenuation can vary significantly. Here, we take advantage of state-of-the-art modelling of galaxy properties to characterize dust parameters (dust attenuation AV, and a parameter describing the dust law slope RV) for 1100 Dark Energy Survey (DES) SN host galaxies. Utilizing optical and infrared data of the hosts alone, we find three key aspects of host dust that impact SN cosmology: (1) there exists a large range (∼1–6) of host RV; (2) high-stellar mass hosts have RV on average ∼0.7 lower than that of low-mass hosts; (3) for a subsample of 81 spectroscopically classified SNe there is a significant (>3σ) correlation between the Hubble diagram residuals of red SNe Ia and the host RV that when corrected for reduces scatter by $\sim 13{{\ \rm per\ cent}}$ and the significance of the ‘mass step’ to ∼1σ. These represent independent confirmations of recent predictions based on dust that attempted to explain the puzzling ‘mass step’ and intrinsic scatter (σint) in SN Ia analyses.

79 ASTRONOMY AND ASTROPHYSICS↗

Concerning colour: The effect of environment on type Ia supernova colour in the dark energy survey

ABSTRACT Recent analyses have found intriguing correlations between the colour (c) of type Ia supernovae (SNe Ia) and the size of their ‘mass-step’, the relationship between SN Ia host galaxy stellar mass (Mstellar) and SN Ia Hubble residual, and suggest that the cause of this relationship is dust. Using 675 photometrically classified SNe Ia from the Dark Energy Survey 5-yr sample, we study the differences in Hubble residual for a variety of global host galaxy and local environmental properties for SN Ia subsamples split by their colour. We find a 3σ difference in the mass-step when comparing blue (c < 0) and red (c > 0) SNe. We observe the lowest r.m.s. scatter (∼0.14 mag) in the Hubble residual for blue SNe in low mass/blue environments, suggesting that this is the most homogeneous sample for cosmological analyses. By fitting for c-dependent relationships between Hubble residuals and Mstellar, approximating existing dust models, we remove the mass-step from the data and find tentative ∼2σ residual steps in rest-frame galaxy U − R colour. This indicates that dust modelling based on Mstellar may not fully explain the remaining dispersion in SN Ia luminosity. Instead, accounting for a c-dependent relationship between Hubble residuals and global U − R, results in ≤1σ residual steps in Mstellar and local U − R, suggesting that U − R provides different information about the environment of SNe Ia compared to Mstellar, and motivating the inclusion of galaxy U − R colour in SN Ia distance bias correction.

79 ASTRONOMY AND ASTROPHYSICS↗

The DEHVILS survey overview and initial data release: high-quality near-infrared Type Ia supernova light curves at low redshift

ABSTRACT While the sample of optical Type Ia supernova (SN Ia) light curves (LCs) usable for cosmological parameter measurements surpasses 2000, the sample of published, cosmologically viable near-infrared (NIR) SN Ia LCs, which have been shown to be good ‘standard candles,’ is still ≲ 200. Here, we present high-quality NIR LCs for 83 SNe Ia ranging from 0.002 < z < 0.09 as a part of the Dark Energy, H0, and peculiar Velocities using Infrared Light from Supernovae (DEHVILS) survey. Observations are taken using UKIRT’s WFCAM, where the median depth of the images is 20.7, 20.1, and 19.3 mag (Vega) for Y, J, and H-bands, respectively. The median number of epochs per SN Ia is 18 for all three bands (Y,J, and H) combined and 6 for each band individually. We fit 47 SN Ia LCs that pass strict quality cuts using three LC models, SALT3, snoopy, and B ayeSN and find scatter on the Hubble diagram to be comparable to or better than scatter from optical-only fits in the literature. Fitting NIR-only LCs, we obtain standard deviations ranging from 0.128 to 0.135 mag. Additionally, we present a refined calibration method for transforming 2MASS magnitudes to WFCAM magnitudes using HST CALSPEC stars that results in a 0.03 mag shift in the WFCAM Y-band magnitudes.

Astronomy & Astrophysics↗

A synthetic Roman Space Telescope High-Latitude Time-Domain Survey: supernovae in the deep field

ABSTRACT NASA will launch the Nancy Grace Roman Space Telescope (hereafter Roman) in the second half of this decade, which will allow for a generation-defining measurement of dark energy through multiple probes, including Type Ia supernovae (SNe Ia). To improve decisions on survey strategy, we have created the first simulations of realistic Roman images that include artificial SNe Ia injected as point sources in the images. Our analysis combines work done on Roman simulations for weak gravitational lensing studies as well as catalogue-level simulations of SN Ia samples. We have created a time series of images over 2 yr containing ∼1050 SNe Ia, covering a 1 deg2 subarea of a planned 5 deg2 deep survey. We have released these images publicly for community use along with input catalogues of all injected sources. We create secondary products from these images by generating coadded images and demonstrating recovery of transient sources using image subtraction. We perform first-use analyses on these images in order to measure galaxy detection efficiency, point source detection efficiency, and host-galaxy association biases. The simulated images can be found here at https://roman.ipac.caltech.edu/sims/SN_Survey_Image_sim.html.

Astronomy & Astrophysics↗

Endothermic self-interacting dark matter in Milky Way-like dark matter haloes

ABSTRACT Self-interacting dark matter (SIDM) offers the potential to mitigate some of the discrepancies between simulated cold dark matter (CDM) and observed galactic properties. We introduce a physically motivated SIDM model to understand the effects of self interactions on the properties of Milky Way and dwarf galaxy sized haloes. This model consists of dark matter with a nearly degenerate excited state, which allows for both elastic and inelastic scattering. In particular, the model includes a significant probability for particles to up-scatter from the ground state to the excited state. We simulate a suite of zoom-in Milky Way-sized N-body haloes with six models with different scattering cross sections to study the effects of up-scattering in SIDM models. We find that the up-scattering reaction greatly increases the central densities of the main halo through the loss of kinetic energy. However, the physical model still results in significant coring due to the presence of elastic scattering and down-scattering. These effects are not as apparent in the subhalo population compared to the main halo, but the number of subhaloes is reduced compared to CDM.

Astronomy & Astrophysics↗

The Local Cluster Survey II: disc-dominated cluster galaxies with suppressed star formation

We investigate the role of dense environments in suppressing star formation by studying $\rm \log _{10}(M_\star /M_\odot) \gt 9.7$ star-forming galaxies in nine clusters from the Local Cluster Survey (0.0137 < z < 0.0433) and a large comparison field sample drawn from the Sloan Digital Sky Survey. We compare the star formation rate (SFR) with stellar mass relation as a function of environment and morphology. After carefully controlling for mass, we find that in all environments, the degree of SFR suppression increases with increasing bulge-to-total (B/T) ratio. In addition, the SFRs of cluster and infall galaxies at a fixed mass are more suppressed than their field counterparts at all values of B/T. These results suggest a quenching mechanism that is linked to bulge growth that operates in all environments and an additional mechanism that further reduces the SFRs of galaxies in dense environments. We limit the sample to B/T ≤ 0.3 galaxies to control for the trends with morphology and find that the excess population of cluster galaxies with suppressed SFRs persists. Here, we model the time-scale associated with the decline of SFRs in dense environments and find that the observed SFRs of the cluster core galaxies are consistent with a range of models including a mechanism that acts slowly and continuously over a long (2–5 Gyr) time-scale, and a more rapid (<1 Gyr) quenching event that occurs after a delay period of 1–6 Gyr. Quenching may therefore start immediately after galaxies enter clusters.

79 ASTRONOMY AND ASTROPHYSICS↗