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At least 1,207 records · Page 67

Effects of altered α - and β -branch carotenoid biosynthesis on photoprotection and whole-plant acclimation of Arabidopsis to photo-oxidative stress

Functions of a- and b-branch carotenoids in whole-plant acclimation to photo-oxidative stress were studied in Arabidopsis thaliana wild-type (wt) and carotenoid mutants, lutein deficient (lut2, lut5), non-photochemical quenching1 (npq1) and suppressor of zeaxanthin-less1 (szl1) npq1 double mutant. Photo-oxidative stress was applied by exposing plants to sunflecks. The sunflecks caused reduction of chlorophyll content in all plants, but more severely in those having high a- to b-branch carotenoid composition (a/b-ratio) (lut5, szl1npq1). While this did not alter carotenoid composition in wt or lut2, which accumulates only b-branch carotenoids, increased xanthophyll levels were found in the mutants with high a/b-ratios (lut5, szl1npq1) or without xanthophyll-cycle operation (npq1, szl1npq1). The PsbS protein content increased in all sunfleck plants but lut2. These changes were accompanied by no change (npq1, szl1npq1) or enhanced capacity (wt, lut5) of NPQ. Leaf mass per area increased in lut2, but decreased in wt and lut5 that showed increased NPQ. The sunflecks decelerated primary root growth in wt and npq1 having normal a/b-ratios, but suppressed lateral root formation in lut5 and szl1npq1 having high a/b-ratios. The results highlight the importance of proper regulation of the a- and b-branch carotenoid pathways for whole-plant acclimation, not only leaf photoprotection, under photo-oxidative stress.

lutein↗

Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems

Soil fungi belonging to different functional guilds, such as saprotrophs, pathogens, and mycorrhizal symbionts, play key roles in forest ecosystems. To date, no study has compared the actual gene expression of these guilds in different forest soils. We used metatranscriptomics to study the competition for organic resources by these fungal groups in boreal, temperate, and Mediterranean forest soils. Using a dedicated mRNA annotation pipeline combined with the JGI MycoCosm database, we compared the transcripts of these three fungal guilds, targeting enzymes involved in C- and N mobilization from plant and microbial cell walls. Genes encoding enzymes involved in the degradation of plant cell walls were expressed at a higher level in saprotrophic fungi than in ectomycorrhizal and pathogenic fungi. However, ectomycorrhizal and saprotrophic fungi showed similarly high expression levels of genes encoding enzymes involved in fungal cell wall degradation. Transcripts for N-related transporters were more highly expressed in ectomycorrhizal fungi than in other groups. Here, we showed that ectomycorrhizal and saprotrophic fungi compete for N in soil organic matter, suggesting that their interactions could decelerate C cycling. Metatranscriptomics provides a unique tool to test controversial ecological hypotheses and to better understand the underlying ecological processes involved in soil functioning and carbon stabilization.

59 BASIC BIOLOGICAL SCIENCES↗

Hybrid-Electric Turbocharger and High-Speed SiC Variable-Frequency Drive Using Sensorless Control Algorithm

Electrically assisted engine boosting systems lend themselves to better throttle response, wider effective operating ranges, and can provide the ability to extract excess energy during deceleration and high-load events (and store it in a vehicle's onboard batteries). This can lead to better overall vehicle performance, emissions, and efficiency while allowing for further engine downsizing and increased power density. In this research effort, a hybrid-electric turbocharger, variable-frequency drive (VFD), and novel sensorless control algorithm were developed. An 11 kW permanent-magnet (PM) machine was coupled to a commercial turbocharger via an in-line, bolt-on housing attached to the compressor inlet. A high-efficiency, high-temperature VFD, consisting of custom control and power electronics, was also developed. The VFD uses SiC MOSFETS to achieve high-switching frequency and can be cooled using an existing engine coolant loop operating at up to 105 °C at an efficiency greater than 98%. A digital sliding mode-observer sensorless speed control algorithm was created to command and regulate speed and achieved ramp rates of over 68,000 rpm/s. A two-machine benchtop motor/generator test stand was constructed for initial testing and tuning of the VFD and sensorless control algorithm. A gas blow-down test stand was constructed to test the mechanical operation of the hybrid-electric turbocharger and speed control using the VFD. In addition, a liquid-pump cart was assembled for high-temperature testing of the VFD. Initial on-engine testing is planned for later this year. This paper intends to present a design overview of the in-line, hybrid-electric device, VFD, and performance characterization of the electronics and sensorless control algorithm.

Engineering↗

A real time dose monitoring and dose reconstruction tool for patient specific VMAT QA and delivery

Purpose: To develop a real time dose monitoring and dose reconstruction tool to identify and quantify sources of errors during patient specific volumetric modulated arc therapy (VMAT) delivery and quality assurance. Methods: The authors develop a VMAT delivery monitor tool called linac data monitor that connects to the linac in clinical mode and records, displays, and compares real time machine parameters with the planned parameters. A new measure, called integral error, keeps a running total of leaf overshoot and undershoot errors in each leaf pair, multiplied by leaf width, and the amount of time during which the error exists in monitor unit delivery. Another tool reconstructs Pinnacle{sup 3} Trade-Mark-Sign format delivered plan based on the saved machine logfile and recalculates actual delivered dose in patient anatomy. Delivery characteristics of various standard fractionation and stereotactic body radiation therapy (SBRT) VMAT plans delivered on Elekta Axesse and Synergy linacs were quantified. Results: The MLC and gantry errors for all the treatment sites were 0.00 {+-} 0.59 mm and 0.05 {+-} 0.31 Degree-Sign , indicating a good MLC gain calibration. Standard fractionation plans had a larger gantry error than SBRT plans due to frequent dose rate changes. On average, the MLC errors were negligible but larger errors of up to 6 mm and 2.5 Degree-Sign were seen when dose rate varied frequently. Large gantry errors occurred during the acceleration and deceleration process, and correlated well with MLC errors (r= 0.858, p= 0.0004). PTV mean, minimum, and maximum dose discrepancies were 0.87 {+-} 0.21%, 0.99 {+-} 0.59%, and 1.18 {+-} 0.52%, respectively. The organs at risk (OAR) doses were within 2.5%, except some OARs that showed up to 5.6% discrepancy in maximum dose. Real time displayed normalized total positive integral error (normalized to the total monitor units) correlated linearly with MLC (r= 0.9279, p < 0.001) and gantry errors (r= 0.742, p= 0.005). There is a strong correlation between total integral error and PTV mean (r= 0.683, p= 0.015), minimum (r= 0.6147, p= 0.033), and maximum dose (r= 0.6038, p= 0.0376). Conclusions: Errors may exist during complex VMAT planning and delivery. Linac data monitor is capable of detecting and quantifying mechanical and dosimetric errors at various stages of planning and delivery.

60 APPLIED LIFE SCIENCES↗

SU-E-T-266: Development of Evaluation System of Optimal Synchrotron Controlling Parameter for Spot Scanning Proton Therapy with Multiple Gate Irradiations in One Operation Cycle

Purpose: We have developed a gated spot scanning proton beam therapy system with real-time tumor-tracking. This system has the ability of multiple-gated irradiation in a single synchrotron operation cycle controlling the wait-time for consecutive gate signals during a flat-top phase so that the decrease in irradiation efficiency induced by irregular variation of gate signal is reduced. Our previous studies have shown that a 200 ms wait-time is appropriate to increase the average irradiation efficiency, but the optimal wait-time can vary patient by patient and day by day. In this research, we have developed an evaluation system of the optimal wait-time in each irradiation based on the log data of the real-time-image gated proton beam therapy (RGPT) system. Methods: The developed system consists of logger for operation of RGPT system and software for evaluation of optimal wait-time. The logger records timing of gate on/off, timing and the dose of delivered beam spots, beam energy and timing of X-ray irradiation. The evaluation software calculates irradiation time in the case of different wait-time by simulating the multiple-gated irradiation operation using several timing information. Actual data preserved in the log data are used for gate on and off time, spot irradiation time, and time moving to the next spot. Design values are used for the acceleration and deceleration times. We applied this system to a patient treated with the RGPT system. Results: The evaluation system found the optimal wait-time of 390 ms that reduced the irradiation time by about 10 %. The irradiation time with actual wait-time used in treatment was reproduced with accuracy of 0.2 ms. Conclusion: For spot scanning proton therapy system with multiple-gated irradiation in one synchrotron operation cycle, an evaluation system of the optimal wait-time in each irradiation based on log data has been developed. Funding Support: Japan Society for the Promotion of Science (JSPS) through the FIRST Program.

60 APPLIED LIFE SCIENCES↗

SU-F-T-527: A Novel Dynamic Multileaf Collimator Leaf-Sequencing Algorithm in Radiation Therapy

Purpose: A novel leaf-sequencing algorithm is developed for generating arbitrary beam intensity profiles in discrete levels using dynamic multileaf collimator (MLC). The efficiency of this dynamic MLC leaf-sequencing method was evaluated using external beam treatment plans delivered by intensity modulated radiation therapy technique. Methods: To qualify and validate this algorithm, integral test for the beam segment of MLC generated by the CORVUS treatment planning system was performed with clinical intensity map experiments. The treatment plans were optimized and the fluence maps for all photon beams were determined. This algorithm started with the algebraic expression for the area under the beam profile. The coefficients in the expression can be transformed into the specifications for the leaf-setting sequence. The leaf optimization procedure was then applied and analyzed for clinical relevant intensity profiles in cancer treatment. Results: The macrophysical effect of this method can be described by volumetric plan evaluation tools such as dose-volume histograms (DVHs). The DVH results are in good agreement compared to those from the CORVUS treatment planning system. Conclusion: We developed a dynamic MLC method to examine the stability of leaf speed including effects of acceleration and deceleration of leaf motion in order to make sure the stability of leaf speed did not affect the intensity profile generated. It was found that the mechanical requirements were better satisfied using this method. The Project is sponsored by the Scientific Research Foundation for the Returned Overseas Chinese Scholars, State Education Ministry.

60 APPLIED LIFE SCIENCES↗

Self-induced transparency, compression, and stopping of electromagnetic pulses interacting with beams of unexcited classical oscillators

The self-induced transparency effects that emerge when short (on the relaxation time scale) light pulses propagate in a two-level noninverted medium are well known in optics. The interaction of microwave pulses with an initially rectilinear electron beam under cyclotron resonance conditions can serve as a classical analog of the described effects. In this case, at a certain intensity of the input signal, the cyclotron absorption is replaced by self-induced transparency when the input pulse propagates almost without any change of its profile, forming a soliton whose amplitude and duration are rigidly related to its velocity. In a certain domain of parameters, this process is accompanied by significant two- or threefold compression of the initial pulse, which is of practical interest for the generation of multigigawatt picosecond microwave pulses. Since the soliton velocity lies between the unperturbed group velocity of the radiation and the translational velocity of the particles, another nontrivial effect in the case of interaction with a counterpropagating electron beam is the possibility of a significant deceleration or full stopping of the electromagnetic pulse.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Cosmic acceleration and Brans-Dicke theory

We study the accelerated expansion of the universe by exploring the Brans-Dicke parameter in different eras. For this, we take the FRW universe model with a viscous fluid (without potential) and the Bianchi type-I universe model with a barotropic fluid (with and without a potential). We evaluate the deceleration parameter and the Brans-Dicke parameter to explore cosmic acceleration. It is concluded that accelerated expansion of the universe can also be achieved for higher values of the Brans-Dicke parameter in some cases.

79 ASTRONOMY AND ASTROPHYSICS↗

Noether symmetries in f(G) gravity

We explore Noether symmetries of the Friedmann–Robertson–Walker universe model in modified Gauss–Bonnet gravity for both vacuum and nonvacuum (dust fluid) cases. We evaluate symmetry generators and the corresponding conserved quantities by using separation of variables and a power-law form. We construct exact f(G) models and study accelerating expansion of the universe in terms of a scale factor, deceleration, and the EoS parameters. We also check the validity of energy conditions through the weak energy conditions for our constructed model. The state finder parameters indicate the resemblance of our constructed models to the ΛCDM model. We conclude that our results are consistent with the recent astrophysical observations.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Effect of the nuclear charge of a fast structural ion on its internal effective stopping in collisions with atoms

The energy losses of fast structural ions in collisions with atoms have been considered in the eikonal approximation. The structural ions are ions consisting of a nucleus and a certain number of electrons bound to it. The effect of nuclear charge Z of the ion on its effective deceleration κ{sup (p)} (energy losses associated with excitation of only intrinsic ion shells) has been analyzed. It is shown that the allowance for the interaction of an atom with the ion nucleus for Z{sub a}Z/v > 1, where Z{sub a} is the charge of the atomic nucleus and v is the velocity of collisions in atomic units, considerably affects the value of κ{sup (p)}, which generally necessitates taking into account nonperturbatively the effect of both charges Z{sub a} and Z on κ{sup (p)}.

74 ATOMIC AND MOLECULAR PHYSICS↗

Physical particularities of nuclear reactors using heavy moderators of neutrons

In nuclear reactors, thermal neutron spectra are formed using moderators with small atomic weights. For fast reactors, inserting such moderators in the core may create problems since they efficiently decelerate the neutrons. In order to form an intermediate neutron spectrum, it is preferable to employ neutron moderators with sufficiently large atomic weights, using {sup 233}U as a fissile nuclide and {sup 232}Th and {sup 231}Pa as fertile ones. The aim of the work is to investigate the properties of heavy neutron moderators and to assess their advantages. The analysis employs the JENDL-4.0 nuclear data library and the SCALE program package for simulating the variation of fuel composition caused by irradiation in the reactor. The following main results are obtained. By using heavy moderators with small neutron moderation steps, one is able to (1) increase the rate of resonance capture, so that the amount of fertile material in the fuel may be reduced while maintaining the breeding factor of the core; (2) use the vacant space for improving the fuel-element properties by adding inert, strong, and thermally conductive materials and by implementing dispersive fuel elements in which the fissile material is self-replenished and neutron multiplication remains stable during the process of fuel burnup; and (3) employ mixtures of different fertile materials with resonance capture cross sections in order to increase the resonance-lattice density and the probability of resonance neutron capture leading to formation of fissile material. The general conclusion is that, by forming an intermediate neutron spectrum with heavy neutron moderators, one can use the fuel more efficiently and improve nuclear safety.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

The crystal acceleration effect for cold neutrons

A new mechanism of neutron acceleration is discussed and studied experimentally in detail for cold neutrons passing through the accelerated perfect crystal with the energies close to the Bragg one. The effect arises due to the following reason. The crystal refraction index (neutron-crystal interaction potential) for neutron in the vicinity of the Bragg resonance sharply depends on the parameter of deviation from the exact Bragg condition, i.e. on the crystal-neutron relative velocity. Therefore the neutrons enter into accelerated crystal with one neutron-crystal interaction potential and exit with the other. Neutron kinetic energy cannot vary inside the crystal due to its homogeneity. So after passage through such a crystal neutrons will be accelerated or decelerated because of the different energy change at the entrance and exit crystal boundaries.

74 ATOMIC AND MOLECULAR PHYSICS↗

Isotropic and anisotropic dark energy models

In this review we discuss the evolution of the universe filled with dark energy with or without perfect fluid. In doing so we consider a number of cosmological models, namely Bianchi type I, III, V, VI{sub 0}, VI and FRW ones. For the anisotropic cosmological models we have used proportionality condition as an additional constrain. The exact solutions to the field equations in quadrature are found in case of a BVI model. It was found that the proportionality condition used here imposed severe restriction on the energy-momentum tensor, namely it leads to isotropic distribution of matter. Anisotropic BVI{sub 0}, BV, BIII and BIDE models with variable EoS parameter ω have been investigated by using a law of variation for the Hubble parameter. In this case the matter distribution remains anisotropic, though depending on the concrete model there appear different restrictions on the components of energy-momentum tensor. That is why we need an extra assumption such as variational a law for the Hubble parameter. It is observed that, at the early stage, the EoS parameter v is positive i.e. the universe was matter dominated at the early stage but at later time, the universe is evolving with negative values, i.e., the present epoch. DE model presents the dynamics of EoS parameter ω whose range is in good agreement with the acceptable range by the recent observations. A spatially homogeneous and anisotropic locally rotationally symmetric Bianchi-I space time filled with perfect fluid and anisotropic DE possessing dynamical energy density is studied. In the derived model, the EoS parameter of DE (ω{sup (de)}) is obtained as time varying and it is evolving with negative sign which may be attributed to the current accelerated expansion of Universe. The distance modulus curve of derived model is in good agreement with SNLS type Ia supernovae for high redshift value which in turn implies that the derived model is physically realistic. A system of two fluids within the scope of a spatially flat and isotropic FRW model is studied. The role of the two fluids, either minimally or directly coupled in the evolution of the dark energy parameter, has been investigated. In doing so we have used three different ansatzs regarding the scale factor that gives rise to a variable decelerating parameter. It is observed that, in the non-interacting case, both the open and flat universes can cross the phantom region whereas in the interacting case only the open universe can cross the phantom region. The stability and acceptability of the obtained solution are also investigated.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Beam dynamics in an ultra-low energy storage rings (review of existing facilities and feasibility studies for future experiments)

Storage rings operating at ultra-low energies and in particular electrostatic storage rings have proven to be invaluable tools for atomic and molecular physics. Due to the mass independence of the electrostatic rigidity, these machines are able to store a wide range of different particles, from light ions to heavy singly charged bio-molecules. However, earlier measurements showed strong limitations on beam intensity, fast decay of ion current, reduced life time etc. The nature of these effects was not fully understood. Also a large variety of experiments in future generation ultra-low energy storage and decelerator facilities including in-ring collision studies with a reaction microscope require a comprehensive investigation of the physical processes involved into the operation of such rings. In this paper, we present review of non-linear and long term beam dynamics studies on example of the ELISA, AD Recycler, TSR and USR rings using the computer codes BETACOOL, OPERA-3D and MAD-X. The results from simulations were benchmarked against experimental data of beam losses in the ELISA storage ring. We showed that decay of beam intensity in ultra-low energy rings is mainly caused by ion losses on ring aperture due to multiple scattering on residual gas. Beam is lost on ring aperture due to small ring acceptance. Rate of beam losses increases at high intensities because of the intra-beam scattering effect adds to vacuum losses. Detailed investigations into the ion kinetics under consideration of the effects from electron cooling and multiple scattering of the beam on a supersonic gas jet target have been carried out as well. The life time, equilibrium momentum spread and equilibrium lateral spread during collisions with this internal gas jet target were estimated. In addition, the results from experiments at the TSR ring, where low intensity beam of CF{sup +} ions at 93 keV/u has been shrunk to extremely small dimensions have been reproduced. Based on these simulations, conditions for stable ring operation with extremely low emittance beam are presented. Finally, results from studies into the interaction of ions with a gas jet target at 3–30 keV energy range are summarized.

43 PARTICLE ACCELERATORS↗

Spinor Field Nonlinearity and Space-Time Geometry

Within the scope of Bianchi type VI,VI0,V, III, I, LRSBI and FRW cosmological models we have studied the role of nonlinear spinor field on the evolution of the Universe and the spinor field itself. It was found that due to the presence of non-trivial non-diagonal components of the energy-momentum tensor of the spinor field in the anisotropic space-time, there occur some severe restrictions both on the metric functions and on the components of the spinor field. In this report we have considered a polynomial nonlinearity which is a function of invariants constructed from the bilinear spinor forms. It is found that in case of a Bianchi type-VI space-time, depending of the sign of self-coupling constants, the model allows either late time acceleration or oscillatory mode of evolution. In case of a Bianchi VI{sub 0} type space-time due to the specific behavior of the spinor field we have two different scenarios. In one case the invariants constructed from bilinear spinor forms become trivial, thus giving rise to a massless and linear spinor field Lagrangian. This case is equivalent to the vacuum solution of the Bianchi VI{sub 0} type space-time. The second case allows non-vanishing massive and nonlinear terms and depending on the sign of coupling constants gives rise to accelerating mode of expansion or the one that after obtaining some maximum value contracts and ends in big crunch, consequently generating space-time singularity. In case of a Bianchi type-V model there occur two possibilities. In one case we found that the metric functions are similar to each other. In this case the Universe expands with acceleration if the self-coupling constant is taken to be a positive one, whereas a negative coupling constant gives rise to a cyclic or periodic solution. In the second case the spinor mass and the spinor field nonlinearity vanish and the Universe expands linearly in time. In case of a Bianchi type-III model the space-time remains locally rotationally symmetric all the time, though the isotropy of space-time can be attained for a large proportionality constant. As far as evolution is concerned, depending on the sign of coupling constant the model allows both accelerated and oscillatory mode of expansion. A negative coupling constant leads to an oscillatory mode of expansion, whereas a positive coupling constant generates expanding Universe with late time acceleration. Both deceleration parameter and EoS parameter in this case vary with time and are in agreement with modern concept of space-time evolution. In case of a Bianchi type-I space-time the non-diagonal components lead to three different possibilities. In case of a full BI space-time we find that the spinor field nonlinearity and the massive term vanish, hence the spinor field Lagrangian becomes massless and linear. In two other cases the space-time evolves into either LRSBI or FRW Universe. If we consider a locally rotationally symmetric BI(LRSBI) model, neither the mass term nor the spinor field nonlinearity vanishes. In this case depending on the sign of coupling constant we have either late time accelerated mode of expansion or oscillatory mode of evolution. In this case for an expanding Universe we have asymptotical isotropization. Finally, in case of a FRW model neither the mass term nor the spinor field nonlinearity vanishes. Like in LRSBI case we have either late time acceleration or cyclic mode of evolution. These findings allow us to conclude that the spinor field is very sensitive to the gravitational one.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Formation of the compression zone in a plasma flow generated by a magnetoplasma compressor

Processes occurring in a plasma flow generated by a magnetoplasma compressor (MPC) during the formation of the compression zone are discussed. The paper presents results of measurements of the spatial distribution of the electric current in the plasma flow, the temporal and spatial (along the flow) distributions of the plasma density, and the profiles of the velocity of individual flow layers along the system axis. The spatial distribution of the electromagnetic force in the flow is analyzed. It is shown that the plasma flow is decelerated when approaching the compression zone and reaccelerated after passing it. In this case, the plasma flow velocity decreases from ν = (2–3) × 10{sup 7} cm/s at the MPC output to ν < 10{sup 6} cm/s in the region of maximum compression and then again increases to 10{sup 7} cm/s at a distance of 15–17 cm from the MPC output. In some MPC operating modes, a displacement of the magnetic field from the compression zone and the formation of toroidal electric current vortices in the plasma flow after passing the compression zone were detected.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Formation of shock waves in a discharge plasma in the presence of a magnetic field

The effect of an external magnetic field on the dynamics of shock waves generated in an argon plasma due to both explosive processes on the cathode and expansion of the spark channel has been studied experimentally. It is shown that the expanding plasma of the cathode spot forms a shock wave and that the application of a longitudinal magnetic field decelerates the radial expansion of the cathode plasma. It is found that the intensities of some argon spectral lines increase in the presence of a magnetic field.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Study of Plasma Flows Generated in Plasma Focus Discharge in Different Regimes of Working Gas Filling

Results are presented from experimental studies of the plasma flows generated in the KPF-4 Phoenix Mather-type plasma focus device (Sukhum Physical Technical Institute). In order to study how the formation and dynamics of the plasma flow depend on the initial distribution of the working gas, a system of pulsed gas puffing into the discharge volume was developed. The system allows one to create profiled gas distributions, including those with a reduced gas density in the region of plasma flow propagation. Results of measurements of the magnetic field, flow profile, and flow deceleration dynamics at different initial distributions of the gas pressure are presented.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗