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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,189 records · Page 66
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Investigating the impacts of solid phase extraction on dissolved organic matter optical signatures and the pairing with high‐resolution mass spectrometry data across a freshwater stream network

Abstract Advancing our understanding of dissolved organic matter (DOM) chemistry in aquatic systems necessitates the integration of data streams from multiple analytical platforms. Some measurements require pretreatment with solid phase extraction (SPE), while others are performed directly on whole water samples. Evidence has suggested that SPE will be biased against select DOM fractions, leading to concerns over the ability to establish data linkages across platforms with variable needs for SPE pretreatment, such as those from optical measurements and those that provide high‐resolution molecular information. Here, we directly addressed this concern by assessing the impact of SPE on DOM optical properties through excitation–emission matrices with parallel factor analysis (PARAFAC) for 47 samples across a stream network within a single watershed reflective of variable DOM sources. PARAFAC data was further paired with molecular information obtained by Fourier transform ion cyclotron resonance mass spectrometry (FTICR‐MS). A comparison of PARAFAC models first revealed no systematic qualitative differences in major components between whole water DOM and DOM isolated by SPE (SPE‐DOM); however, quantitative biases against select components were observed. Further linkages with FTICR‐MS data revealed that the molecular fingerprint associated with each PARAFAC component was consistent between the whole water DOM and SPE‐DOM. Our results suggest that bulk scale linkages across these analytical platforms could be inferred irrespective of the observed quantitative biases resulting from SPE for samples within this example watershed. This work represents a key step toward the systematic evaluation of linkages between optical and high‐resolution mass spectrometry datasets in freshwater lotic environments.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1989

Effects of cardiac phase on diameter measurements from coronary cineangiograms

The measurement variability of end-diastolic frames is compared with frames taken from the other portions of the cardiac cycle. Two computer measurements, average diameter and minimum, are obtained for every frame of two complete cardiac cycles in angiograms of 20 subjects. Six schemes for sampling frames in various portions of the cardiac cycle are defined and the standard deviation is calculated for pairs of measurements from each scheme. The results suggest that the best strategy for frame selection is to use sequential frames in end-diastole. However, it is noted that if random samples are taken anywhere in the cardiac cycle instead of sequentially in end-diastole, the variability of two vessel edge measures changes from 4.9 percent to 6.3 percent, which is considered to be a small penalty.

Selzer, Robert H.↗
DOE OSTI2018

ColorMap ND : A Data-Driven Approach and Tool for Mapping Multivariate Data to Color

A wide variety of color schemes have been devised for mapping scalar data to color. We address the challenge of color-mapping multivariate data. While a number of methods can map low-dimensional data to color, for example, using bilinear or barycentric interpolation for two or three variables, these methods do not scale to higher data dimensions. Likewise, schemes that take a more artistic approach through color mixing and the like also face limits when it comes to the number of variables they can encode. Our approach does not have these limitations. It is data driven in that it determines a proper and consistent color map from first embedding the data samples into a circular interactive multivariate color mapping display (ICD) and then fusing this display with a convex (CIE HCL) color space. The variables (data attributes) are arranged in terms of their similarity and mapped to the ICD’s boundary to control the embedding. Using this layout, the color of a multivariate data sample is then obtained via modified generalized barycentric coordinate interpolation of the map. In conclusion, the system we devised has facilities for contrast and feature enhancement, supports both regular and irregular grids, can deal with multi-field as well as multispectral data, and can produce heat maps, choropleth maps, and diagrams such as scatterplots.

97 MATHEMATICS AND COMPUTING↗
NASA NTRS2014

Extravehicular Activity Asteroid Exploration and Sample Collection Capability

NASA's Asteroid Redirect Crewed Mission (ARCM) is challenged with primary mission objectives of demonstrating deep space Extravehicular Activity (EVA) and tools, and obtaining asteroid samples to return to Earth for further study. Although the Modified Advanced Crew Escape Suit (MACES) is used for the EVAs, it has limited mobility which increases fatigue and decreases the crews' capability to perform EVA tasks. Furthermore, previous Shuttle and International Space Station (ISS) spacewalks have benefited from EVA interfaces which have been designed and manufactured on Earth. Rigid structurally mounted handrails, and tools with customized interfaces and restraints optimize EVA performance. For ARCM, some vehicle interfaces and tools can leverage heritage designs and experience. However, when the crew ventures onto an asteroid capture bag to explore the asteroid and collect rock samples, EVA complexity increases due to the uncertainty of the asteroid properties. The variability of rock size, shape and composition, as well as bunching of the fabric bag will complicate EVA translation, tool restraint and body stabilization. The unknown asteroid hardness and brittleness will complicate tool use. The rock surface will introduce added safety concerns for cut gloves and debris control. Feasible solutions to meet ARCM EVA objectives were identified using experience gained during Apollo, Shuttle, and ISS EVAs, terrestrial mountaineering practices, NASA Extreme Environment Mission Operations (NEEMO) 16 mission, and during Neutral Buoyancy Laboratory testing in the MACES suit. The proposed concept utilizes expandable booms and integrated features of the asteroid capture bag to position and restrain the crew at the asteroid worksite. These methods enable the capability to perform both finesse, and high load tasks necessary to collect samples for scientific characterization of the asteroid. This paper will explore the design trade space and options that were examined for EVA, the overall concept for the EVAs including translation paths and body restraint methods, potential tools used to extract the samples, design implications for the Asteroid Redirect Vehicle (ARV) for EVA, the results of early development testing of potential EVA tasks, and extensibility of the EVA architecture to NASA's exploration missions.

Scoville, Zebulon↗
DOE OSTI2018

Abnormal Transport and Magnetic Properties Induced by Change of the Phase Volume Ratio for YBa{sub 2}Cu{sub 3}O{sub 7-δ}/La{sub 0.67}Sr{sub 0.33}MnO{sub 3} Hybrids

Two elaborately designed hybrids consisting of superconducting YBa{sub 2}Cu{sub 3}O{sub 7-δ} (YBCO) and ferromagnetic La{sub 0.67}Sr{sub 0.33}MnO{sub 3} (LSMO), namely 20 × (YBCO(m)/LSMO(100 − m)) are prepared on single crystal SrTiO{sub 3} (STO) by pulsed laser deposition (PLD) with 20 being repetition periods and m = 90 and 10, respectively, which represents YBCO pulse number in a period. The films show highly c-oriented and epitaxial quality, suggested by XRD 𝜃–2𝜃 scans and pole figures. The 20 × (YBCO90/LSMO10) sample with a large YBCO volume fraction exhibits the typical character of a metal superconductor at about 90 K, while its transition width reaches 9.1 K, which is nearly eight times of that of the pure YBCO film. Above the superconducting transition temperature, a superparamagnetic signal rather than ferromagnetic behavior is observed, which may be associated with a diluted system consisting of the ferromagnetic nanoparticles embedded in the superconducting films. For the hybrid with a small YBCO volume fraction, i.e., the 20 × (YBCO10/LSMO90) sample, its transport behavior at normal state is insulating, and it is found that the Mott variable range hopping conduction dominates in this insulating phase in the temperature range 70–310 K. Obviously distinguishable insulator to superconductor (IS) transition occurs at 52 K, but the superconducting diamagnetic signals are very weak in the magnetic measurements below the IS temperature. For this sample, the magnetization loop at 100 K is ferromagnetic, yet manifested by a reduced coercive field and residual magnetization as compared with a pure LSMO film. In fact, both hybrids represent two kinds of nanocomposites, i.e., superconducting nanoparticles in a ferromagnetic matrix and ferromagnetic nanoparticles in a superconducting matrix, which benefits to study interfacial interactions due to an increased interface to value ratio and reduced size effect.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2016

Leaf chlorophyll content as a proxy for leaf photosynthetic capacity

Improving the accuracy of estimates of forest carbon exchange is a central priority for understanding ecosystem response to increased atmospheric CO 2 levels and improving carbon cycle modelling. However, the spatially continuous parameterization of photosynthetic capacity (Vcmax) at global scales and appropriate temporal intervals within terrestrial biosphere models (TBMs) remains unresolved. This research investigates the use of biochemical parameters for modelling leaf photosynthetic capacity within a deciduous forest. Particular attention is given to the impacts of seasonality on both leaf biophysical variables and physiological processes, and their interdependent relationships. Four deciduous tree species were sampled across three growing seasons (2013-2015), approximately every 10 days for leaf chlorophyll content (Chl Leaf ) and canopy structure. Leaf nitrogen (N Area ) was also measured during 2014. Leaf photosynthesis was measured during 2014-2015 using a Li-6400 gas-exchange system, with A-Ci curves to model Vcmax. Results showed that seasonality and variations between species resulted in weak relationships between Vcmax normalized to 25°C (Vcmax 25 ) and N Area ( R 2 = 0.62, P < 0.001), whereas Chl Leaf demonstrated a much stronger correlation with Vcmax 25 ( R 2 = 0.78, P < 0.001). The relationship between Chl Leaf and N Area was also weak ( R 2 = 0.47, P < 0.001), possibly due to the dynamic partitioning of nitrogen, between and within photosynthetic and nonphotosynthetic fractions. The spatial and temporal variability of Vcmax 25 was mapped using Landsat TM/ETM satellite data across the forest site, using physical models to derive Chl Leaf . TBMs largely treat photosynthetic parameters as either fixed constants or varying according to leaf nitrogen content. This research challenges assumptions that simple N Area - Vcmax 25 relationships can reliably be used to constrain photosynthetic capacity in TBMs, even within the same plant functional type. It is suggested that Chl Leaf provides a more accurate, direct proxy for Vcmax 25 and is also more easily retrievable from satellite data. These results have important implications for carbon modelling within deciduous ecosystems.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2016

Three Dimensional Variable-Wavelength X-Ray Bragg Coherent Diffraction Imaging

Here, we present and demonstrate a formalism by which three-dimensional (3D) Bragg x-ray coherent diffraction imaging (BCDI) can be implemented without moving the sample by scanning the energy of the incident x-ray beam. This capability is made possible by introducing a 3D Fourier transform that accounts for x-ray wavelength variability. We also demonstrate the approach by inverting coherent Bragg diffraction patterns from a gold nanocrystal measured with an x-ray energy scan. Furthermore, variable-wavelength BCDI will expand the breadth of feasible in situ 3D strain imaging experiments towards more diverse materials environments, especially where sample manipulation is difficult.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
NASA NTRS1989

The Exosat spectral survey of AGN

Results are presented from Exosat observations of 48 hard X-ray selected Seyfert-type active galactic nuclei (AGN). These include all 30 of the emission line AGN in the Piccinotti (1981) sample. Combining Exosat LE and ME data has yielded X-ray spectra over the broad energy range 0.1-10 keV. Spectra in the about 2-10 keV range are found to be well described by a simple power law, with a narrow distribution of spectral indices across the sample about a mean energy index alpha = 0.70. Exosat has also revealed a substantial number of sources with complex soft X-ray spectra. Evidence that soft emission components occur in many Seyferts, together with detection of rapid variability in the soft component, provides a quantitative support for an accretion disk model for AGN. Approximately half of the present sample of AGN show low-energy absorption attributable to substantial cold matter within the host galaxy. A few cases show evidence for column variability and reduced low-energy opacity (by photo-ionization). These results and the observed rarity of intrinsic absorption in the higher luminosity sources suggest the absorbing matter lies close to the central continuum source.

Turner, T. J.↗
NASA NTRS2008

Near-infrared Variability in the 2MASS Calibration Fields: A Search for Planetary Transit Candidates

The Two Micron All Sky Survey (2MASS) photometric calibration observations cover approximately 6 square degrees on the sky in 35 'calibration fields,' each sampled in nominal photometric conditions between 562 and 3692 times during the 4 years of the 2MASS mission. We compile a catalog of variables from the calibration observations to search for M dwarfs transited by extrasolar planets. We present our methods for measuring periodic and nonperiodic flux variability. From 7554 sources with apparent K(sub s) magnitudes between 5.6 and 16.1, we identify 247 variables, including extragalactic variables and 23 periodic variables. We have discovered three M dwarf eclipsing systems, including two candidates for transiting extrasolar planets.

statistical methods↗
NASA NTRS1987

Detectability of minerals on desert alluvial fans using reflectance spectra

The visible and near-infrared reflectance spectra of soil samples collected from desert alluvial and colluvial surfaces in the Cuprite mining district, Nevada, were analyzed. These surfaces are downslope from hydrothermally altered volcanic rocks that contain spectrally characteristic minerals such as alunite and kaolinite. Coarse fractions of the soils on the alluvial fans are mineralogically variable and express the upslope lithologies; fine fractions are remarkably similar mineralogically and spectrally in all samples because of dilution of local mineral components by regionally derived windblown dust. Theoretical models for spectral mixing and for particle-size effects were used to model the observed spectral variations. Diagnostic mineral absorption bands in the spectra of fan materials were enhanced by computationally removing the spectrum of the homogeneous fine-soil component. Results show that spectral mixing models are useful for analyzing data with high spectral resolution obtained by field and aircraft spectrometers.

Shipman, Hugh↗
DOE OSTI2018

Lead exposure to children from consumption of backyard chicken eggs

Highlights: • Backyard chicken eggs from most households providing egg samples (98%) contained detectable concentrations of lead. • IIn prediction models, backyard egg consumption increased overall blood lead levels in children • Infants < 1 year of age experience the greatest increase in predicted blood lead levels from backyard egg consumption. • Mean household egg lead concentration was strongly positively correlated with coop soil lead concentrations. Backyard chicken ownership is rapidly increasing in urban areas in the United States, largely as a way to provide eggs for household consumption. Despite elevated levels of environmental lead contamination in many US cities, the role of backyard chicken eggs as a pathway for lead exposure, particularly for children, has received limited scrutiny. To characterize lead exposure from consumption of backyard chicken eggs for children and predict related effects on blood lead level (BLL), we conducted a cross-sectional study of backyard chicken owners in the Greater Boston area (n = 51). We interviewed participants regarding egg consumption by household members and collected backyard eggs (n = 201) and coop soil samples (n = 48) for analysis. Inductively coupled plasma mass spectrometry (ICP-MS) was used to evaluate lead concentration in homogenized eggs and an X-ray fluorescence (XRF) portable device was used to assess soil lead levels in the laboratory. We used the USEPA's Integrated Exposure Uptake Biokinetic Model for Lead in Children (IEUBK) to assess the relative contribution of backyard egg consumption to aggregate BLL in children. Four scenarios were developed in the IEUBK model to address variability in egg consumption rates and egg lead contamination. Lead was detected in egg samples from 98% of the households that provided egg samples. Mean household lead concentration was 0.10 μg/g (SD: 0.18). Egg lead concentrations ranged from below the limit of detection (0.0014 μg/g) to 1.798 μg/g (<1.4–1198 ppb). Egg lead levels were strongly positively correlated with lead concentration in coop soil (r = 0.64; p < 0.001). In modeled scenarios where a child < 7 years frequently ate eggs highly contaminated with lead, BLLs are predicted to increase by 0.9–1.5 μg/dL. In three other scenarios reflecting more moderate egg lead contamination and consumption rates, BLLs were predicted to increase from 0.1 to 0.8 μg/dL. Consumption of backyard chicken eggs can contribute to lead exposure in children. Soil lead remediation prior to chicken ownership may reduce lead exposure from backyard eggs.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Summertime Aerosol across the North Slope of Alaska Field Campaign Report

The Summertime Aerosol across the North Slope of Alaska U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility field campaign, a collaborative effort between the University of Michigan and Baylor University, was focused on chemically characterizing sources of summertime aerosol impacting the Utqiagvik (Barrow, NSA) and the Oliktok Point (AMF3) ARM sites. This campaign was co-funded by a grant from the National Oceanic and Atmospheric Administration (NOAA, PI: Kerri Pratt, Co-I: Rebecca Sheesley) titled “Assessment of Atmospheric Aerosols Resulting from Oil and Gas Extraction Activities near the North Slope of Alaska”. The ARM field campaign took place on the North Slope of Alaska (NSA) from August 21 to September 30, 2015 and August 12 to September 20, 2016, with filter sampling occurring both years at both the NSA Barrow and AMF3 Oliktok Point sites. Online intensive measurements occurred at Barrow in 2015 and at Oliktok Point in 2016, coordinated with the arrival of the ARM Aerosol Observing System (AOS) in August 2016 at Oliktok Point. During 2015, the University of Michigan deployed the newly constructed aerosol time-of-flight mass spectrometer (ATOFMS), as well as a microanalysis particle sampler (MPS) to collect particles for offline analysis by computer-controlled scanning electron microscopy with energy-dispersive x-ray spectroscopy (CCSEM-EDX). Unfortunately, an issue with the time-of-flight mass spectrometer on the ATOFMS limited the number of particles that produced mass spectra during the 2015 study. This issue was subsequently fixed for the 2016 deployment. During 2016, the ATOFMS was deployed to the AMF3 at the Oliktok Point field site, in addition to a micro-orifice uniform deposition impactor (MOUDI) to collect particles for offline analysis by CCSEM-EDX. Notably, these measurements, to our knowledge, represent the first real-time, single-particle chemical characterization (aerosol mixing state) measurements at Utqiagvik and Oliktok Point. Online aerosol measurements also included: PM2.5 (particulate matter <2.5 μm) black carbon mass concentrations (aethalometer; Baylor) and size-resolved (0.013-20 μm) number concentrations (scanning mobility particle sizer, SMPS, and aerodynamic particle sizer, APS; Michigan). Baylor conducted filter sampling at both the Utqiagvik and Oliktok Point locations during both intensive operational periods (IOPs). Baylor deployed a total suspended particulate matter (TSP) sampler to Oliktok Point, and continuous one-week samples were collected in 2015 for a total of seven samples; during 2016, continuous 3-7 day samples were collected, for a total of 13 filters. Baylor deployed a TSP sampler and a PM1.0 sampler at Utqiagvik, Alaska; continuous 4-7 day filter samples were collected in 2015 for a total of eight samples. To supplement this campaign, PI Sheesley had a simultaneous DOE ARM field campaign at Utqiagvik and Oliktok Point (https://www.arm.gov/research/ campaigns/amf2016bbc), the goal of which was to collected continuous one-week TSP samples at both sites from June 2016 to September 2017. These results provide better context in terms of annual trends and for year-to-year variability and a final report with data was already submitted by PI Sheesley for that project. Analysis by Baylor focuses on TSP samples because of the extremely low PM loading on the PM1.0 sampler. Michigan deployed a three-stage impactor (0.07-5 μm PM collection) at Utqiagvik and a 10-stage impactor (0.056-10 μm PM collection) at Oliktok Point, during the 2015 and 2016 campaigns, respectively.

Arctic processes, North Slope of Alaska, Barrow, O↗
NASA NTRS2006

Development of Standardized Lunar Regolith Simulant Materials

Lunar exploration requires studies using standardized testing procedures. Previous lunar simulants focused on physical aspects of the lunar regolith. Renewed lunar exploration requires standardized lunar regolith simulant (SLRS) materials that simulate the physical, chemical, and mineralogical properties of the regolith [l]. A root simulant models an end-member, and a derivative is formed by addition of material [2]. The 2005 Workshop recommended a low-Ti mare basalt and a high-Ca highland anorthosite set of roots. Derivatives involve addition of ilmenite and glassy agglutinates [3]. An ideal SLRS material is homogeneous. Geochemical standards are finely-ground to reduce chemical variability, but lunar simulants have a grain size variation and mineralogy that must match the lunar regolith. The simulant homogeneity is monitored using major, minor, and trace element data of progressively smaller samples compared to bulk material. Both chemical and geotechnical properties depend on the contrast from grain to grain. The variability of simulant material is an inherent property that must be taken into account. Simulant production requires monitoring of adherence to simulant requirements and homogeneity during production. Quality control establishes a traceability to a master set of reference standards.

Carpenter, P.↗
DOE OSTI2019

Difficult-to-neutralize global HIV-1 isolates are neutralized by antibodies targeting open envelope conformations

Abstract The HIV-1 envelope (Env) is the target for neutralizing antibodies and exists on the surface of virions in open or closed conformations. Difficult-to-neutralize viruses (tier 2) express Env in a closed conformation antigenic for broadly neutralizing antibodies (bnAbs) but not for third variable region (V3) antibodies. Here we show that select V3 macaque antibodies elicited by Env vaccination can neutralize 26% of otherwise tier 2 HIV-1 isolates in standardized virus panels. The V3 antibodies only bound to Env in its open conformation. Thus, Envs on tier 2 viruses sample a state where the V3 loop is not in its closed conformation position. Envelope second variable region length, glycosylation sites and V3 amino acids were signatures of neutralization sensitivity. This study determined that open conformations of Env with V3 exposed are present on a subset of otherwise neutralization-resistant virions, therefore neutralization of tier 2 HIV-1 does not always indicate bnAb induction.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Data for: Patel et al. Carbon flux estimates are sensitive to data source: A comparison of field and lab temperature sensitivity data

This dataset contains data and code used for the paper "Carbon flux estimates are sensitive to data source: A comparison of field and lab temperature sensitivity data" [DOI COMING SOON]A large literature exists on mechanisms driving soil production of the greenhouse gases CO2 and CH4. Measurements of these gases’ fluxes are often performed using closed-chamber incubations in the laboratory or in situ, i.e., in the field. Although it is common knowledge that measurements obtained through field studies vs. laboratory incubations can diverge because of the vastly different conditions of these environments, few studies have systematically examined these patterns. It is crucial to understand the magnitude and reasons for any differences, as these data are used to parametrize and benchmark ecosystem- to global-scale models, which are then susceptible to the biases of the source data. Here, we specifically examine how greenhouse gas measurements may be influenced by whether the measurement/incubation was conducted in the field vs. laboratory, focusing on CO2 and CH4 measurements. We use Q10 of greenhouse gas flux (temperature sensitivity) for our analyses, because of the ubiquity of this metric in biological and Earth system sciences and its importance to many modeling frameworks. We predicted that laboratory measurements would be less variable, but also less representative of true field conditions. However, there was greater variability in the Q10 values calculated from lab-based measurements of CO2 fluxes, because lab experiments explore extremes rarely seen in situ, and reflect the physical and chemical disturbances occurring during sampling, transport, and incubation. Overall, respiration Q10 values were significantly greater in laboratory incubations (mean = 4.19) than field measurements (mean = 3.05), with strong influences of incubation temperature and climate region/biome. However, this was in part because field measurements typically represent total respiration (Rs), whereas lab incubations typically represent heterotrophic respiration (Rh), making direct comparisons difficult to interpret. Focusing only on Rh-derived Q10, these values showed almost identical distributions across laboratory (n = 1110) and field (n = 581) experiments, providing strong support for using the former as an experimental proxy for the latter, although we caution that geographic biases in the extant data make this conclusion tentative. Due to a smaller sample size of CH4 Q10 data, we were unable to perform a comparable robust analysis, but we expect similar interactions with soil temperature, moisture, and environmental/climatic variables. Our results here suggest the need for more concerted efforts to document and standardize these data, including sample and site metadata. This dataset contains a compressed (.zip) archive of the data and R scripts used for this manuscript. The dataset includes files in .csv format, which can be accessed and processed using MS Excel or R. This archive can also be accessed on GitHub at https://github.com/kaizadp/field_lab_q10 (DOI: 10.5281/zenodo.7106554).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Measurement of the top quark forward-backward production asymmetry and the anomalous chromoelectric and chromomagnetic moments in pp collisions at $ \sqrt{s} $ = 13 TeV

AbstractThe parton-level top quark (t) forward-backward asymmetry and the anomalous chromoelectric $ \left({\hat{d}}_{\mathrm{t}}\right) $ and chromomagnetic $ \left({\hat{\mu}}_{\mathrm{t}}\right) $ moments have been measured using LHC pp collisions at a center-of-mass energy of 13 TeV, collected in the CMS detector in a data sample corresponding to an integrated luminosity of 35.9 fb$^{−1}$. The linearized variable $ {A}_{\mathrm{FB}}^{(1)} $ is used to approximate the asymmetry. Candidate $ \mathrm{t}\overline{\mathrm{t}} $ events decaying to a muon or electron and jets in final states with low and high Lorentz boosts are selected and reconstructed using a fit of the kinematic distributions of the decay products to those expected for $ \mathrm{t}\overline{\mathrm{t}} $ final states. The values found for the parameters are $ {A}_{\mathrm{FB}}^{(1)}={0.048}_{-0.087}^{+0.095}{\left(\mathrm{stat}\right)}_{-0.029}^{+0.020}\left(\mathrm{syst}\right),{\hat{\mu}}_{\mathrm{t}}=-{0.024}_{-0.009}^{+0.013}{\left(\mathrm{stat}\right)}_{-0.011}^{+0.016}\left(\mathrm{syst}\right), $ and a limit is placed on the magnitude of $ \left|{\hat{d}}_{\mathrm{t}}\right| $< 0.03 at 95% confidence level.[graphic not available: see fulltext]

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2016

Urinary microRNAs as potential biomarkers of pesticide exposure

MicroRNAs (miRNAs) are post-transcriptional regulators that silence messenger RNAs. Because miRNAs are stable at room temperature and long-lived, they have been proposed as molecular biomarkers to monitor disease and exposure status. While urinary miRNAs have been used clinically as potential diagnostic markers for kidney and bladder cancers and other diseases, their utility in non-clinical settings has yet to be fully developed. Our goal was to investigate the potential for urinary miRNAs to act as biomarkers of pesticide exposure and early biological response by identifying the miRNAs present in urine from 27 parent/child, farmworker/non-farmworker pairs (16FW/11NFW) collected during two agricultural seasons (thinning and post-harvest) and characterizing the between- and within-individual variability of these miRNA epigenetic regulators. MiRNAs were isolated from archived urine samples and identified using PCR arrays. Comparisons were made between age, households, season, and occupation. Of 384 miRNAs investigated, 297 (77%) were detectable in at least one sample. Seven miRNAs were detected in at least 50% of the samples, and one miRNA was present in 96% of the samples. Principal components and hierarchical clustering analyses indicate significant differences in miRNA profiles between farmworker and non-farmworker adults as well as between seasons. Six miRNAs were observed to be positively associated with farmworkers status during the post-harvest season. Expression of five of these miRNA trended towards a positive dose response relationship with organophosphate pesticide metabolites in farmworkers. These results suggest that miRNAs may be novel biomarkers of pesticide exposure and early biological response. - Highlights: • A novel method to identify microRNA biomarkers in urinary samples is proposed. • Six miRNAs have been identified as associated with occupational farm work and pesticide exposure. • An observed seasonal difference suggests transient characteristics of urinary miRNAs.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2018

Extended live-tracking and quantitative characterization of wound healing and cell migration with SiR-Hoechst

Highlights: • SiR-Hoechst is a nuclear dye that enables cell tracking without affecting migration. • Single cell analysis provides multiple migration metrics during wound healing. • Cell density-based report of wound healing is less susceptible to subjective bias. • Cell directionality is an important contributor of early wound recovery. Cell migration is essential to many life processes, including immune response, tissue repair, and cancer progression. A reliable quantitative characterization of the cell migration can therefore aid in the high throughput screening of drug efficacy in wound healing and cancer treatments. In this work, we report what we believe is the first use of SiR-Hoechst for extended live tracking and automated analysis of cell migration and wound healing. We showed through rigorous statistical comparisons that this far-red label does not affect migratory behavior. We observed excellent automated tracking of random cell migration, in which the motility parameters (speed, displacement, path length, directionality ratio, persistence time, and direction autocorrelation) obtained closely match those obtained from manual tracking. We also present an analysis framework to characterize the healing of a scratch wound from the perspective of single cells. The use of SiR-Hoechst is advantageous for the crowded environments in wound healing assays because as long as cell nuclei do not overlap, continuous tracking can be maintained even if there is cell-cell contact. In this paper, we report wound recovery based on the number of cells migrating into the wound over time, normalized by the initial cell count prior to the infliction of the wound. This normalized cell count approach is impervious to operator bias during the arbitration of wound edges and is also robust against variability that arises due to differences in the cell density of different samples. Additional wound healing characteristics were also defined based on the evolution of cell speed and directionality during healing. Not unexpected, the wound healing cells exhibited much higher tendency to maintain the same migratory direction in comparison to the randomly migrating cells. The use of SiR-Hoechst thus greatly simplified the automation of single cell and whole population analysis with high spatial and temporal resolution over extended periods of time.

60 APPLIED LIFE SCIENCES↗