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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,189 records · Page 66

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DOE OSTI2016

Long-Term Warming Alters Carbohydrate Degradation Potential in Temperate Forest Soils

ABSTRACT As Earth's climate warms, soil carbon pools and the microbial communities that process them may change, altering the way in which carbon is recycled in soil. In this study, we used a combination of metagenomics and bacterial cultivation to evaluate the hypothesis that experimentally raising soil temperatures by 5°C for 5, 8, or 20 years increased the potential for temperate forest soil microbial communities to degrade carbohydrates. Warming decreased the proportion of carbohydrate-degrading genes in the organic horizon derived from eukaryotes and increased the fraction of genes in the mineral soil associated with Actinobacteria in all studies. Genes associated with carbohydrate degradation increased in the organic horizon after 5 years of warming but had decreased in the organic horizon after warming the soil continuously for 20 years. However, a greater proportion of the 295 bacteria from 6 phyla (10 classes, 14 orders, and 34 families) isolated from heated plots in the 20-year experiment were able to depolymerize cellulose and xylan than bacterial isolates from control soils. Together, these findings indicate that the enrichment of bacteria capable of degrading carbohydrates could be important for accelerated carbon cycling in a warmer world. IMPORTANCE The massive carbon stocks currently held in soils have been built up over millennia, and while numerous lines of evidence indicate that climate change will accelerate the processing of this carbon, it is unclear whether the genetic repertoire of the microbes responsible for this elevated activity will also change. In this study, we showed that bacteria isolated from plots subject to 20 years of 5°C of warming were more likely to depolymerize the plant polymers xylan and cellulose, but that carbohydrate degradation capacity is not uniformly enriched by warming treatment in the metagenomes of soil microbial communities. This study illustrates the utility of combining culture-dependent and culture-independent surveys of microbial communities to improve our understanding of the role changing microbial communities may play in soil carbon cycling under climate change.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Multidecadal shifts in forest plant diversity and community composition across glacial landforms in northern lower Michigan, USA

Understanding how plant community assemblage is affected by spatial and temporal patterns is crucial to understanding forest ecosystem responses to disturbance, including future climate change. In this article, we tracked how diversity and composition are distributed through space and time in a midsuccessional mixed hardwood forest in northern lower Michigan, United States. This region’s geographically and abiotically distinct glacial landforms influence both the spatial and temporal dynamics of its forest communities. Vegetation sampling plots (n = 87) were established at the University of Michigan Biological Station in 1990 and resampled in 2015. Vegetation in the overstory, sapling, and groundcover layers was censused. Abiotic variables, including elevation, pH, and soil nutrients, were measured in a subset of plots (n = 40). There were strong differences in diversity and community composition among glacial landforms, with the moraine having a 31% greater species richness in the groundcover layer compared with those of the other glacial landforms. Surprisingly, plant communities across all three vegetation layers showed little change over the 25-year period, and we found no evidence of differences in successional rates among glacial landforms. Our findings indicate that glacial landforms have a large influence on the production and maintenance of local plant diversity and community composition in this area and suggest that successional dynamics may manifest themselves over much longer time periods in these northern biomes.

Forestry↗

DOE OSTI2015

Erratum to: Search for production of WW / WZ resonances decaying to a lepton, neutrino and jets in pp collisions at $\sqrt{s}=8$ TeV with the ATLAS detector

It has been found that the bulk RS graviton (G*)(G*) exclusion limits were erroneously expressed as a function of σ(pp→G*)×BR(G*→WW)σ(pp→G*)×BR(G*→WW) . The corrected version of the top plot in Fig. 2 of the paper is presented below. With this correction, resonance masses below 760 GeV are excluded at 95 % confidence level for this model.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2018

η ′ → η π π decays in unitarized resonance chiral theory

We study the hadronic $η^{\prime}\toηππ$ decays within the framework of $U(3)_{L}\otimes U(3)_{R}$ Chiral Perturbation Theory including resonance states and the complete one-loop corrections. The amplitude is projected in partial waves and unitarized by means of the $N/D$ method resumming both the important $S$-and $D$-wave $ππ$ and the subleading $S$-wave $πη$ final-state interactions. The participating scalar multiplet mass and coupling strengths are determined from fits to the Dalitz plot experimental data recently released by the A2 collaboration. As a byproduct of our analysis, the associated Dalitz-plot slope parameters are found to be $a=-0.072(7)_{\rm{stat}}(8)_{\rm{syst}}\,, b=-0.052(1)_{\rm{stat}}(2)_{\rm{syst}}\,, d=-0.051(8)_{\rm{stat}}(6)_{\rm{syst}}$, which lie in the ballpark of the current experimental and theoretical determinations.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2021

Radiative three-body D -meson decays in and beyond the standard model

We study radiative charm decays D → P 1 P 2γ , P 1,2 = π, K in QCD factorization at leading order and within heavy hadron chiral perturbation theory. Branching ratios including resonance contributions are around ~10 –3 for the Cabibbo-favored modes into Kπγ and ~10 –5 for the singly Cabibbo-suppressed modes into π + π – γ,K + K – γ, and thus in reach of the flavor factories BES III and Belle II. Dalitz plots and forward–backward asymmetries reveal significant differences between the two QCD frameworks; such observables are therefore ideally suited for a data-driven identification of relevant decay mechanisms in the standard-model dominated D → Kπγ decays. This increases the potential to probe new physics with the D → π + π – γ and D → K + K – γ decays, which are sensitive to enhanced dipole operators. CP asymmetries are useful to test the SM and look for new physics in neutral |ΔC| = 1 transitions. Cuts in the Dalitz plot enhance the sensitivity to new physics due to the presence of both s- and t, u-channel intermediate resonances.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

Toward extracting $$\gamma $$ from $$B\rightarrow DK$$ without binning

Abstract $$B^\pm \rightarrow DK^\pm $$ B ± → D K ± transitions are known to provide theoretically clean information about the CKM angle $$\gamma $$ γ , with the most precise available methods exploiting the cascade decay of the neutral D into CP self-conjugate states. Such analyses currently require binning in the D decay Dalitz plot, while a recently proposed method replaces this binning with the truncation of a Fourier series expansion. In this paper, we present a proof of principle of a novel alternative to these two methods, in which no approximations at the level of the data representation are required. In particular, our new strategy makes no assumptions about the amplitude and strong phase variation over the Dalitz plot. This comes at the cost of a degree of ambiguity in the choice of test statistic quantifying the compatibility of the data with a given value of $$\gamma $$ γ , with improved choices of test statistic yielding higher sensitivity. While our current proof-of-principle implementation does not demonstrate optimal sensitivity to $$\gamma $$ γ , its conceptually novel approach opens the door to new strategies for $$\gamma $$ γ extraction. More studies are required to see if these can be competitive with the existing methods.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2022

Computational Estimation by Scientific Data Mining with Classical Methods to Automate Learning Strategies of Scientists

Experimental results are often plotted as 2-dimensional graphical plots (aka graphs) in scientific domains depicting dependent versus independent variables to aid visual analysis of processes. Repeatedly performing laboratory experiments consumes significant time and resources, motivating the need for computational estimation. The goals are to estimate the graph obtained in an experiment given its input conditions, and to estimate the conditions that would lead to a desired graph. Existing estimation approaches often do not meet accuracy and efficiency needs of targeted applications. We develop a computational estimation approach called AutoDomainMine that integrates clustering and classification over complex scientific data in a framework so as to automate classical learning methods of scientists. Knowledge discovered thereby from a database of existing experiments serves as the basis for estimation. Challenges include preserving domain semantics in clustering, finding matching strategies in classification, striking a good balance between elaboration and conciseness while displaying estimation results based on needs of targeted users, and deriving objective measures to capture subjective user interests. These and other challenges are addressed in this work. The AutoDomainMine approach is used to build a computational estimation system, rigorously evaluated with real data in Materials Science. Our evaluation confirms that AutoDomainMine provides desired accuracy and efficiency in computational estimation. It is extendable to other science and engineering domains as proved by adaptation of its sub-processes within fields such as Bioinformatics and Nanotechnology.

Computer Science↗

DOE OSTI2023

ALGEBRA v.1.27

The ALGEBRA program allows the user to manipulate data from a finite element analysis before it is plotted. The finite element output data is in the form of variable values (e.g., stress, strain, and velocity components) in an EXODUS II database. The ALGEBRA program evaluates user-supplied functions of the data and writes the results to an output EXODUS II database that can be read by plot programs.

Sjaardema, Gregory↗

DOE OSTI2017

SimApp 1.8.x

System for converting DESIRE (Direct Executing Simulation in Real Time) simulation models to executable code models (C# / C++). These converted models are used as the basis for 2 products, one of which is the focus of this review: an engineering design interface for Fissile Solution Systems. ModelConverter.exe (C#) converts DESIRE model inputs to a C++ plug-in subclass. SimApp.exe (C# / C++) has a C++ dll that is a numerical integration engine that the Converted models plug into. The engineering design interface is a C# GUI that calls on the C++ dll to execute a particular converted model. The GUI allows the user to specify the length of a simulation, run the simulation, view data plots and data tables. Stability plots may also be produced and manipulated. The engineering design interface will be released as source code and executable; the model converter source is also intended for release.

Determan, JohnC.↗

DOE OSTI2019

CATS v. 2

This program calculates performance characteristics for a split flow recompression closed Brayton cycle. The user defines for the cycle; minimum temperature, minimum pressure, maximum temperature, maximum pressure, pinch temperature at the cold ends of the low temperature and high temperature recuperators, component fractional pressure drop, and efficiencies for each of the two turbines and each of the two compressors. All of these parameters except component fractional pressure drop and turbomachinery efficiencies are varies in separate do loops. In this way, minimum and maximum values for each of these parameters can be set. Results from each iteration are saved to a .csv file. Following completion of the program run, the .csv file can be read into a plotting package and the results can be plotted.

Pasch, James↗

DOE OSTI2019

bokeh streaming [SWR 19-08]

Simple examples of bokeh streaming data. The plots are intended to be generic and able to infer some of the plot data from the structure of the data sent. The receiver accepts zlib compressed pickled python dictionaries.

Simpson, Jeffery↗

DOE OSTI2021

Igor Pro procedures for ARPES analysis (ARPES Igor procedures) v21.0

A suite of non-proprietary C-like procedures (code) that compile and run within the commercial Igor Pro data analysis program (wavemetrics.com) have been developed for the data file loading, plotting and analysis of Angle-Resolved Photoemission Spectroscopy (ARPES) data. The data file loading procedures are more specific to ARPES data acquisition and file formats at Advanced Light Source (ALS) beamlines, while plotting and analysis procedures are more generic to processing of 1D, 2D and higher dimensional dataset arrays with some specific tools tailored to the ARPES technique.

Rotenberg, Eli↗

DOE OSTI2014

Lipid Informed Quantitation and Identification

LIQUID (Lipid Informed Quantitation and Identification) is a software program that has been developed to enable users to conduct both informed and high-throughput global liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based lipidomics analysis. This newly designed desktop application can quickly identify and quantify lipids from LC-MS/MS datasets while providing a friendly graphical user interface for users to fully explore the data. Informed data analysis simply involves the user specifying an electrospray ionization mode, lipid common name (i.e. PE(16:0/18:2)), and associated charge carrier. A stemplot of the isotopic profile and a line plot of the extracted ion chromatogram are also provided to show the MS-level evidence of the identified lipid. In addition to plots, other information such as intensity, mass measurement error, and elution time are also provided. Typically, a global analysis for 15,000 lipid targets.

Crowell, Kevin↗

DOE OSTI2016

Sensor Fish Communicator

The Sensor Fish collects information that can be used to evaluate conditions encountered by juvenile salmonids and other fish as they pass through hydroelectric dams on their way to the ocean. Sensor Fish are deployed in turbines, spillways, and sluiceways and measure changes in pressure, angular rate of change, and linear acceleration during passage. The software is need to make Sensor Fish fully functional and easy to use. Sensor Fish Communicator (SFC) links to Sensor Fish, allowing users to control data collection settings and download data. It may also be used to convert native raw data (.raw2) files into Comma Separated Variable (.csv) files and plot the results. The multiple capabilities of the SFC allow hardware communication, data conversion, and data plotting with one application.

Source record↗

DOE OSTI2022

Ring Pull Strain Analysis

Ring Pull Strain Analysis (RPSA) is a framework for analysis of Digital Image Correlation (DIC) data of gaugeless ring pull testing. It is meant for analysis of rings cut from tube cross sections and pulled in a displacement-controlled tensile test. This code takes load frame data, images take during testing, and csv files from the DIC analysis of those images and allows the user to analyze and plot data from the test. Some important features of the software include getting the strain values as a function of radial distance and angle, plotting of the strain around the ring, and stress-strain analysis of the load frame data.

Beck, Peter↗

DOE OSTI2023

UEDGE toolbox

The UEDGE Toolbox supplies an object-based interface and a wide array of tools used for running and analyzing UEDGE simulations. The toolbox provides routines for setting up UEDGE cases using YAML input files, shorthand commands for restoring converged solutions, as well as plotting profiles and surface plots of any of the parameters in UEDGE. Furthermore, the toolbox provides the necessary objects for compiling and analyzing parameter scans consisiting of several UEDGE simulations.

Holm, AndreasM↗

DOE OSTI2023

coloring v.1.0

SAND2024-02435O The software coloring allows applications written in the C++ language to generate publication-quality 2D plots. Its functionality is similar to Microsoft Excel's chart functionality or the Python language's matplotlib package. The value of coloring is that it is written purely in C++ and thus can be compiled on systems where Python is not available and linked into high performance computing software. For drawing shapes onto an image, coloring uses the mathematical definition of quadratic Bezier splines and uses Newton's method to search for the closest point on a spline to a given query point. This is then used to do accurate sub-pixel sampling to get clean, non-pixelated images. For working with the actual plot data, coloring has basic statistical methods such as finding maxima and minima as well as axis scaling such as logarithms. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Ibanez, Daniel↗

DOE OSTI2024

Ring Pull Strain Analysis

Beck, Peter↗