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At least 1,189 records · Page 66

Xyloglucan Endotransglucosylase-Hydrolase30 negatively affects salt tolerance in Arabidopsis

Plants have evolved various strategies to sense and respond to saline environments that severely reduce plant growth and limit agricultural productivity. Alteration to the cell wall is one strategy that helps plants adapt to salt stress. However, we do not fully understand the physiological significance of how cell wall components respond to salt stress. Here, we show that expression of XTH30, encoding a xyloglucan endotransglucosylase/hydrolase, is strongly up-regulated in response to salt stress in Arabidopsis thaliana. Loss-of-function in XTH30 leads to increased salt tolerance and overexpression of XTH30 results in salt hypersensitivity. XTH30 is located in the plasma membrane and highly expressed in the root, flower, stem, and etiolated hypocotyl. The NaCl-induced increase in XLFG (xyloglucan-derived (XyG) oligosaccharide) of the wild type is partly blocked in xth30 mutants. Loss-of-function in XTH30 slows down the decrease of crystalline cellulose content and the depolymerization of microtubules caused by salt stress. Moreover, less Na+ accumulation in shoot and H 2 O 2 content are found in xth30 mutants in response to salt stress. Taken together, these results indicate that XTH30 modulates XyG side chains with altered abundance of XLFG, the cellulose synthesis and cortical microtubule stability, and then negatively affects salt tolerance.

59 BASIC BIOLOGICAL SCIENCES↗

Structural Tolerance of Zirconium Diboride under Electron Irradiation through in-situ Convergent Beam Electron Diffraction and Energy-dispersive X-ray Spectroscopy

Zirconium diboride (ZrB 2 ) is a ultra-high temperature ceramic with high melting temperature (>3000 K), super strength and hardness, good thermal conductivity, and excellent resistance to plasma erosion and chemical erosion, being widely applied in hypersonic flight, arc-electrodes, refractory materials, and plasma-facing materials in fusion reactors. Therefore, the structural stability of the material is essential for the applications. Up to now, the material was investigated under neutron irradiation and high-energy ion irradiations. It was reported that the neutron irradiation caused swelling and catastrophic cracking. High-energy ions (30 keV He + ) changed the surface morphology and caused the bright blue and brown colors on ZrB 2 surfaces between 920 K and 1120 K. The electron irradiation tolerance of the material has not been reported yet. Here we used convergent beam electron diffraction (CBED) and energy-dispersive X-ray spectroscopy (EDS) to investigate structural tolerances of ZrB 2 crystals under high-energy electrons at room temperature under vacuum. Finally, the investigation would benefit the understanding of its structural tolerance at microscales.

42 ENGINEERING↗

Constraining magnetic fields in the circumgalactic medium

ABSTRACT We study the properties of magnetic fields in the circumgalactic medium (CGM) of z < 1 galaxies by correlating Faraday rotation measures (RMs) of ∼1000 high-redshift radio sources with the foreground galaxy number density estimated from the DESI Legacy Imaging Surveys. This method enables us to extract signals of RMs contributed by intervening gas around multiple galaxies. Our results show that there is no detectable correlation between the distribution of RMs and the number of foreground galaxies, contrary to several previous results. Utilizing the non-detection signals, we estimate 3σ upper limits to the RMs from the CGM of $\sim \!20 \rm \ rad\, m^{-2}$ within 50 kpc and $\sim \!10 \rm \ rad \, m^{-2}$ at separations of 100 kpc. By adopting a column density distribution of ionized gas obtained from absorption-line measurements, we further estimate the strengths of coherent magnetic fields parallel to the line of sight of $\lt \rm 2 \ \mu G$ in the CGM. We show that the estimated upper limits of RMs and magnetic field strengths are sufficient to constrain outputs of recent galaxy magnetohydrodynamic simulations. Finally, we discuss possible causes for the inconsistency between our results and previous works.

79 ASTRONOMY AND ASTROPHYSICS↗

H i content of massive red spiral galaxies observed by FAST

ABSTRACT A sample of 279 massive red spirals was selected optically by Guo et al., among which 166 galaxies have been observed by the ALFALFA survey. In this work, we observe H i content of the rest 113 massive red spiral galaxies using the Five-hundred-meter Aperture Spherical radio Telescope (FAST). 75 of the 113 galaxies have H i detection with a signal-to-noise ratio (S/N) greater than 4.7. Compared with the red spirals in the same sample that have been observed by the ALFALFA survey, galaxies observed by FAST have on average a higher S/N, and reach to a lower H i mass. To investigate why many red spirals contain a significant amount of H i mass, we check colour profiles of the massive red spirals using images observed by the DESI Legacy Imaging Surveys. We find that galaxies with H i detection have bluer outer discs than the galaxies without H i detection, for both ALFALFA and FAST samples. For galaxies with H i detection, there exists a clear correlation between galaxy H i mass and g-r colour at outer radius: galaxies with higher H i masses have bluer outer discs. The results indicate that optically selected massive red spirals are not fully quenched, and the H i gas observed in many of the galaxies may exist in their outer blue discs.

79 ASTRONOMY AND ASTROPHYSICS↗

The stellar halo of isolated central galaxies in the Hyper Suprime-Cam imaging survey

We study the faint stellar halo of isolated central galaxies, by stacking galaxy images in the HSC survey and accounting for the residual sky background sampled with random points. The surface brightness profiles in HSC r band are measured for a wide range of galaxy stellar masses (9.2 < log 10 M * /M ⊙ < 11.4) and out to 120 kpc. Failing to account for the stellar halo below the noise level of individual images will lead to underestimates of the total luminosity by ≤15%. Splitting galaxies according to the concentration parameter of their light distributions, we find that the surface brightness profiles of low-concentration galaxies drop faster between 20 and 100 kpc than those of high-concentration galaxies. Albeit the large galaxy-to-galaxy scatter, we find a strong self-similarity of the stellar halo profiles. They show unified forms once the projected distance is scaled by the halo virial radius. The colour of galaxies is redder in the centre and bluer outside, with high-concentration galaxies having redder and more flattened colour profiles. There are indications of a colour minimum, beyond which the colour of the outer stellar halo turns red again. This colour minimum, however, is very sensitive to the completeness in masking satellite galaxies. We also examine the effect of the extended PSF in the measurement of the stellar halo, which is particularly important for low-mass or low-concentration galaxies. The PSF-corrected surface brightness profile can be measured down to ~31 magarcsec -2 at 3σ significance. PSF also slightly flattens the measured colour profiles.

79 ASTRONOMY AND ASTROPHYSICS↗

POGO-DB—a database of pairwise-comparisons of genomes and conserved orthologous genes

POGO-DB (http://pogo.ece.drexel.edu/) provides an easy platform for comparative microbial genomics. POGO-DB allows users to compare genomes using pre-computed metrics that were derived from extensive computationally intensive BLAST comparisons of >2000 microbes. These metrics include (i) average protein sequence identity across all orthologs shared by two genomes, (ii) genomic fluidity (a measure of gene content dissimilarity), (iii) number of ‘orthologs’ shared between two genomes, (iv) pairwise identity of the 16S ribosomal RNA genes and (v) pairwise identity of an additional 73 marker genes present in >90% prokaryotes. Users can visualize these metrics against each other in a 2D plot for exploratory analysis of genome similarity and of how different aspects of genome similarity relate to each other. The results of these comparisons are fully downloadable. In addition, users can download raw BLAST results for all or user-selected comparisons. Therefore, we provide users with full flexibility to carry out their own downstream analyses, by creating easy access to data that would normally require heavy computational resources to generate. POGO-DB should prove highly useful for researchers interested in comparative microbiology and benefit the microbiome/metagenomic communities by providing the information needed to select suitable phylogenetic marker genes within particular lineages.

59 BASIC BIOLOGICAL SCIENCES↗

Identification and functional analysis of strigolactone pathway genes regulating tillering traits in sugarcane

Abstract Saccharum officinarum and Saccharum spontaneum are two fundamental species of modern sugarcane cultivars, exhibiting divergent tillering patterns crucial for sugarcane architecture and yield. Strigolactones (SLs), a class of plant hormones, are considered to play a central role in shaping plant form and regulating tillering. Our study highlights the distinct tillering patterns observed between S. officinarum and S. spontaneum and implicates significant differences in SL levels in root exudates between the two species. Treatment with rac-GR24 (an artificial SL analog) suppressed tillering in S. spontaneum. Based on transcriptome analysis, we focused on two genes, TRANSCRIPTION ELONGATION FACTOR 1 (TEF1) and CIRCADIAN CLOCK ASSOCIATED1 (CCA1), which show higher expression in S. spontaneum or S. officinarum, respectively. While the overexpression of SoCCA1 did not lead to significant phenotypic differences, overexpression of SsTEF1 in rice stimulated tillering and inhibited plant height, demonstrating its role in tillering regulation. However, the overexpression of suggests that SoCCA1 may not be the key regulator of sugarcane tillering. Yeast one-hybrid assays identified four transcription factors (TFs) regulating SsTEF1 and four and five TFs regulating SsCCA1 and SoCCA1. This study provides a theoretical foundation for deciphering the molecular mechanisms underlying the different tillering behaviors between S. officinarum and S. spontaneum, providing valuable insights for the molecular-based design of sugarcane breeding strategies.

Qi, Yiying↗

Cell Wall Composition and Candidate Biosynthesis Gene Expression During Rice Development

Cell walls of grasses, including cereal crops and biofuel grasses, comprise the majority of plant biomass and intimately influence plant growth, development and physiology. However, the functions of many cell wall synthesis genes, and the relationships among and the functions of cell wall components remain obscure. To better understand the patterns of cell wall accumulation and identify genes that act in grass cell wall biosynthesis, we characterized 30 samples from aerial organs of rice (Oryza sativa cv. Kitaake) at 10 developmental time points, 3-100 d post-germination. Within these samples, we measured 15 cell wall chemical components, enzymatic digestibility and 18 cell wall polysaccharide epitopes/ligands. We also used quantitative reverse transcription-PCR to measure expression of 50 glycosyltransferases, 15 acyltransferases and eight phenylpropanoid genes, many of which had previously been identified as being highly expressed in rice. Most cell wall components vary significantly during development, and correlations among them support current understanding of cell walls. We identified 92 significant correlations between cell wall components and gene expression and establish nine strong hypotheses for genes that synthesize xylans, mixed linkage glucan and pectin components. This work provides an extensive analysis of cell wall composition throughout rice development, identifies genes likely to synthesize grass cell walls, and provides a framework for development of genetically improved grasses for use in lignocellulosic biofuel production and agriculture.

59 BASIC BIOLOGICAL SCIENCES↗

A continuous symmetry breaking measure for finite clusters using Jensen-Shannon divergence

A quantitative measure of symmetry breaking is introduced that allows the quantification of which symmetries are most strongly broken due to the introduction of some kind of defect in a perfect structure. The method uses a statistical approach based on the Jensen-Shannon divergence. The measure is calculated by comparing the transformed atomic density function with its original. Software code is presented that carries the calculations out numerically using Monte Carlo methods. The behavior of this symmetry breaking measure is tested for various cases including finite size crystallites (where the surfaces break the crystallographic symmetry), atomic displacements from high symmetry positions, and collective motions of atoms due to rotations of rigid octahedra. Finally, the approach provides a powerful tool for assessing local symmetry breaking and offers new insights that can help researchers understand how different structural distortions affect different symmetry operations.

atomic & molecular structure↗

Exploring the onset of collectivity approaching 𝑁=40 with masses of manganese isotopes

Isotopes in the region of the nuclear chart below 68 Ni have been the subject of intense experimental and theoretical effort due to the potential onset of a new “island of inversion” when crossing the harmonic oscillator subshell closure at 𝑁=40. Here, we have measured the masses of 64−68 Mn using TITAN's multiple-reflection time-of-flight mass spectrometer, resulting in the first precision mass measurements of 67 Mn and 68 Mn. These results are compared to ab initio calculations and modern shell model calculations and show an increase in collectivity approaching 𝑁=40.

binding energy & masses↗

New level scheme and lifetime measurement of the 13/2 + state in 209 Po

The level structure of 209 Po has been studied by in-beam 𝛾-ray spectroscopy with the 209 Bi ⁢( 6 Li ,𝛼⁢2⁢𝑛) 209 Po reaction at beam energies of 28, 30, 34 MeV. The level scheme of 209 Po is expanded by the 𝛾−𝛾 coincidence measurement, where 27 new transitions and 23 new levels are observed. The lifetimes of 13/2 − , 17/2 − , and 23/2 + states are obtained and are consistent with the previous work, while the one of the 13/2 + state is measured for the first time. A configuration-interaction-shell-model calculation is performed, and its results are compared with the experimental results for 209 Po , with an emphasis on the coupling between the single valence neutron hole and the even-even core of 210 Po . A systematic comparison of the 13/2 + state in N = 125 chain is also studied in the current work.

190 ≤ A ≤ 219↗

Retrieval of full angular- and energy-dependent complex transition dipoles in the molecular frame from laser-induced high-order harmonic signals with aligned molecules

High-order harmonic signals generated in molecules are the consequence of coherent summation of complex laser-induced transition dipoles $\textit{d}(θ, ω)$ with each fixed-in-space molecule; here $\theta$ is the angle of the molecular axis with respect to the laser polarization axis and $\omega$ is the harmonic energy. In the so-called rotational coherent spectroscopy, it is proposed to extract the fixed-in-space $\textit{d}(θ, ω)$ in the molecular frame by measuring harmonics generated by a probing laser from the rotational molecular wave packets that have been prepared by a prior pump laser. By varying the time delay between the two lasers, methods have been utilized to extract the $\theta$ dependence of both the amplitude and phase of each individual harmonic, but the relative phase between harmonics cannot be retrieved. Here we report that this limitation can be removed. It requires the additional measurement of harmonic spectra versus the pump-probe angles at one fixed time delay. The two-dimensional input harmonic data (time-delay and pump-probe angle) are then used to retrieve the full complex transition dipole $\textit{d}(θ, ω)$ using a retrieval method based on machine learning algorithms. Finally, we demonstrate this method on N 2 and CO 2 molecules.

74 ATOMIC AND MOLECULAR PHYSICS↗

Anomalous ellipticity dependence of the generation of near-threshold harmonics in noble gases

We measured the ellipticity dependence of the harmonic yield of He, Ne, Ar, Kr, and Xe. It is found that the harmonic yield in general decreases monotonically with increasing laser ellipticity but anomalous dependence does occur for each atom for some harmonic orders. Additionally, we found that the degree of anomaly is weakest in helium but is stronger for the heavier atoms. The anomaly also depends on laser intensity. To explain these features, we developed a quantum trajectory Monte Carlo (QTMC) model based on the quantum path integral theory to study high-order harmonic generation (HHG). The model includes the effect of Coulomb potential from the target ion, thus it is capable of calculating near-threshold harmonics quantitatively. This model reveals that the presence of Coulomb potential would generate orbiting trajectories which are responsible for the anomalous ellipticity dependence near the threshold.

74 ATOMIC AND MOLECULAR PHYSICS↗

Superconductivity in single crystals of ZrP 1.27 Se 0.73

Results are reported for single crystals of the PbFCl-type layered compound ZrP 1.27 Se 0.73 that were produced using the iodine vapor transport method. Electrical transport, magnetization, and heat capacity measurements reveal disordered metallic behavior and the occurrence of bulk superconductivity, with a transition temperature (T c ) of 7.1 K and an anisotropic orbitally limited upper critical field. 31 P nuclear magnetic resonance measurements provide additional microscopic information, where the line shape, Knight shift, and spin-lattice relaxation data are consistent with the superconductivity originating from the corrugated Zr-P(2c)/Se plane. This suggests that the superconductivity first forms in the corrugated plane and the bulk superconductivity eventually occurs via coupling between the square planar layers. These data also show that either there are multiple superconducting gaps or there is a single gap that does not fully open across the entire Fermi surface. Finally, these results clarify the superconducting state in this material and will enable further measurements that require single-crystal specimens.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Tunable artificial topological Hall effects in van der Waals heterointerfaces

The topological Hall effect (THE) originating from a real-space Berry phase is a significant transport signal for chiral spin textures and has been extensively investigated recently due to its potential applications in topological spintronics. Recently, chiral spin textures and THE were realized in heterointerfaces where spatial inversion symmetry is naturally broken. However, multichannel transport in heterointerfaces can mask the intrinsic THE associated with chiral spin textures. We systematically investigate multichannel transport in two different kinds of van der Waals (vdW) heterointerfaces. In ferromagnetic-ferromagnetic (FM-FM) heterointerfaces with two opposite anomalous Hall effects, multichannel transport has mimicked both positive and negative THE without involving any topological charges, which is dubbed as an artificial THE. Moreover, artificial THEs were also observed in FM-metal heterointerfaces consisting of a single FM layer stacked onto a nodal-line semimetal; this was attributed to the presence of multichannel transport as well. Our findings provide an alternative explanation for THE-like features in heterointerfaces. They also reveal exotic multichannel transport properties in vdW heterointerfaces which could facilitate the development of multifunctional nanodevices based on vdW heterointerfaces.

36 MATERIALS SCIENCE↗