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At least 1,171 records · Page 65

Recreating Giants Impacts in the Laboratory: Shock Compression of MgSiO 3 Bridgmanite to 14 Mbar

Understanding giant impacts requires accurate description of how extreme pressures and temperatures affect the physical properties of the constituent materials. Here, we report shock experiments on two polymorphs of MgSiO 3 : enstatite and bridgmanite (perovskite) crystals.We obtain pressure-density shock equation of state to 14 Mbar and more than 9 g/cm 3 , a 40% increase in density from previous data on MgSiO 3 . Density-functional-theory molecular dynamics (DFT-MD) simulations provide predictions for the shock Hugoniot curves for bridgmanite and enstatite and suggest that the Grüneisen parameter decreases with increasing density. The good agreement between the simulations and the experimental data, including for the shock temperature along the enstatite Hugoniot reveals that DFT-MD simulations reproduce well the behavior of dense fluid MgSiO 3 .We also reveal a high optical reflectance indicative of a metal-like electrical conductivity which supports the hypothesis that magma oceans may contribute to planetary magnetic field generation.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Laboratory Electrical Conductivity of Marine Gas Hydrate

Methane hydrate was synthesized from pure water ice and flash frozen seawater, with varying amounts of sand or silt added. Electrical conductivity was determined by impedance spectroscopy, using equivalent circuit modeling to separate the effects of electrodes and to gain insight into conduction mechanisms. Silt and sand increase the conductivity of pure hydrate; we infer by contaminant NaCl contributing to conduction in hydrate, to values in agreement with resistivities observed in well logs through hydrate–saturated sediment. The addition of silt and sand lowers the conductivity of hydrate synthesized from seawater by an amount consistent with Archie's law. Here, all samples were characterized using cryogenic scanning electron microscopy and energy dispersive spectroscopy, which show good connectivity of salt and brine phases. Electrical conductivity measurements of pure hydrate and hydrate mixed with silt during pressure–induced dissociation support previous conclusions that sediment increases dissociation rate.

58 GEOSCIENCES↗

Frictional Behavior Downdip Along the Subduction Megathrust: Insights From Laboratory Experiments on Exhumed Samples at In Situ Conditions

Subduction megathrusts exhibit a spectrum of slip modes, including catastrophic earthquakes. Although the mechanical and frictional properties of materials sampled from subduction zones have been studied extensively, few datasets have been collected for compositions and at pressure and temperature conditions representative of those in situ. The Nankai subduction zone in southwest Japan is a well-studied margin, and abundant data provide an opportunity to advance our understanding of fault and earthquake physics. Here, we use samples exhumed in the Shimanto and Sanbagawa Belts on Shikoku Island of southwest Japan that represent analogs for materials along the present-day megathrust at depths of ~5–>25 km, and we shear these at their peak in situ pressure-temperature (P-T) conditions. Effective normal stresses range from 28 to 192 MPa, and temperatures from 105°C to 470°C. We used pore fluid pressures of 45–240 MPa, corresponding to fluid overpressure ratios λ of 0.65 and 0.90. Slip velocities of 0.1–100 μm/s were used, in order to focus on the nucleation of instability and earthquakes. We found predominantly velocity-strengthening (inherently stable) behavior under all conditions for λ = 0.65. For λ = 0.90, velocity-weakening behavior was observed at 350°C, with velocity-strengthening behavior at lower and higher temperatures. The rate/state frictional stability parameter (a-b) increases with slip velocity at temperatures up to ~200°C and remains constant or decreases with slip velocity at higher temperatures. Altogether, our results demonstrate the potentially important roles of both temperature and slip velocity in controlling the distribution of stress and frictional rheology along subduction thrusts.

58 GEOSCIENCES↗

Ensemble-based enzyme design can recapitulate the effects of laboratory directed evolution in silico

The creation of artificial enzymes is a key objective of computational protein design. Although de novo enzymes have been successfully designed, these exhibit low catalytic efficiencies, requiring directed evolution to improve activity. Here, we use room-temperature X-ray crystallography to study changes in the conformational ensemble during evolution of the designed Kemp eliminase HG3 (k cat /K M 146 M -1 s -1 ). We observe that catalytic residues are increasingly rigidified, the active site becomes better pre-organized, and its entrance is widened. Based on these observations, we engineer HG4, an efficient biocatalyst (k cat /K M 103,000 M -1 s -1 ) containing key first and second-shell mutations found during evolution. HG4 structures reveal that its active site is pre-organized and rigidified for efficient catalysis. Our results show how directed evolution circumvents challenges inherent to enzyme design by shifting conformational ensembles to favor catalytically-productive sub-states, and suggest improvements to the design methodology that incorporate ensemble modeling of crystallographic data.

59 BASIC BIOLOGICAL SCIENCES↗

Creep fronts and complexity in laboratory earthquake sequences illuminate delayed earthquake triggering

Earthquakes occur in clusters or sequences that arise from complex triggering mechanisms, but direct measurement of the slow subsurface slip responsible for delayed triggering is rarely possible. We investigate the origins of complexity and its relationship to heterogeneity using an experimental fault with two dominant seismic asperities. The fault is composed of quartz powder, a material common to natural faults, sandwiched between 760 mm long polymer blocks that deform the way 10 meters of rock would behave. We observe periodic repeating earthquakes that transition into aperiodic and complex sequences of fast and slow events. Neighboring earthquakes communicate via migrating slow slip, which resembles creep fronts observed in numerical simulations and on tectonic faults. Utilizing both local stress measurements and numerical simulations, we observe that the speed and strength of creep fronts are highly sensitive to fault stress levels left behind by previous earthquakes, and may serve as on-fault stress meters.

58 GEOSCIENCES↗

Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations

Accurate forecasts can enable more effective public health responses during seasonal influenza epidemics. For the 2021–22 and 2022–23 influenza seasons, 26 forecasting teams provided national and jurisdiction-specific probabilistic predictions of weekly confirmed influenza hospital admissions for one-to-four weeks ahead. Forecast skill is evaluated using the Weighted Interval Score (WIS), relative WIS, and coverage. Six out of 23 models outperform the baseline model across forecast weeks and locations in 2021–22 and 12 out of 18 models in 2022–23. Averaging across all forecast targets, the FluSight ensemble is the 2nd most accurate model measured by WIS in 2021–22 and the 5th most accurate in the 2022–23 season. Forecast skill and 95% coverage for the FluSight ensemble and most component models degrade over longer forecast horizons. In this work we demonstrate that while the FluSight ensemble was a robust predictor, even ensembles face challenges during periods of rapid change.

59 BASIC BIOLOGICAL SCIENCES↗

Origin of biogeographically distinct ecotypes during laboratory evolution

Resource partitioning is central to the incredible productivity of microbial communities, including gigatons in annual methane emissions through syntrophic interactions. Previous work revealed how a sulfate reducer (Desulfovibrio vulgaris, Dv) and a methanogen (Methanococcus maripaludis, Mm) underwent evolutionary diversification in a planktonic context, improving stability, cooperativity, and productivity within 300-1000 generations. Here, we show that mutations in just 15 Dv and 7 Mm genes within a minimal assemblage of this evolved community gave rise to co-existing ecotypes that were spatially enriched within a few days of culturing in a fluidized bed reactor. The spatially segregated communities partitioned resources in the simulated subsurface environment, with greater lactate utilization by attached Dv but partial utilization of resulting H 2 by low affinity hydrogenases of Mm in the same phase. The unutilized H 2 was scavenged by high affinity hydrogenases of planktonic Mm, producing copious amounts of methane. Our findings show how a few mutations can drive resource partitioning amongst niche-differentiated ecotypes, whose interplay synergistically improves productivity of the entire mutualistic community.

59 BASIC BIOLOGICAL SCIENCES↗

A Novel Relative Permeability Model for Gas and Water Flow in Hydrate-Bearing Sediments With Laboratory and Field-Scale Application

In a producing gas hydrate reservoir the effective porosity available for fluid flow constantly changes with dissociation of gas hydrate. Therefore, accurate prediction of relative permeability using legacy models (e.g. Brooks-Corey (B-C), van Genuchten, etc.) that were developed for conventional oil and gas reservoirs would require empirical parameters to be calibrated at various S h over its range of variation, but such calibrations are precluded because of lack of experimental relative permeability data. This study proposes a new relative permeability model for gas hydrate-bearing media that is a function of maximum capillary pressure, capillary entry pressure, pore size distribution index, residual saturations, hydrate saturation, and four other constants. The three novel features of the proposed model are: (i) requires fitting its six empirical parameters only once using experimental data from any single S h , and the same set of empirical parameters predict relative permeability at all S h , (ii) includes the effect of capillarity, and (iii) includes the effect of pore-size distribution. From practical standpoint, the model can be used to simulate multiphase flow in gas hydrate-bearing sediments where the proposed relative permeability can account for the evolving hydrate saturation. The proposed model is implemented in a numerical simulator and the wall time required to perform simulations using the proposed model is shown to be similar to the time it takes to run same simulations with the B-C model. The proposed model is a step forward towards achieving the goal of physically accurate modeling of multiphase flow for gas hydrate-bearing sediments that accounts for the effect of gas hydrate saturation change on relative permeability.

54 ENVIRONMENTAL SCIENCES↗

Radioactive molecules as laboratories of fundamental physics

Radioactive molecules provide a new platform in the search for new physics, at energy scales complementary to those probed by high-energy particle colliders. Here, by combining enhancements from nuclear properties with the sensitivity and control offered by molecular structure, experiments with radioactive molecules offer great reach in the search for physics beyond the standard model. Progress in this field is being driven by advances in the production and control of radioactive molecules, alongside the development of new experimental tools and theoretical techniques. In this Perspective, we discuss the current status and future prospects of this rapidly developing, interdisciplinary field at the intersection of nuclear physics, atomic and molecular physics and particle physics.

Jadbabaie, A. [Massachusetts Institute of Technolo↗

Feasibility study of a compact heavy ion source for investigation of laboratory magnetospheric plasma

We are developing a laser ion source to provide a high brightness multi-charged heavy ion beam as a part of the heavy ion beam probe system, which will be used to diagnose plasma potential in the Ring Trap 1 device at the University of Tokyo. As a probe beam, Nb2+ was selected, and a detailed laser irradiation condition was explored. It was found that the laser power density of 1.2 × 109 W/cm2 gives the maximum particle number of Nb2+ per laser energy from a niobium foil target. Essential ablation plasma parameters to design the laser ion source were also obtained. The expected beam current was more than 12 mA/cm2, with a pulse width of 3.1 µs at 200 mm away from the target.

Nakamura, K. (ORCID:0000000176882589)↗

Continuum electromagnetic gyrokinetic simulations of turbulence in the tokamak scrape-off layer and laboratory devices

Here, we present algorithms and results from Gkeyll, a full-f continuum, electromagnetic gyrokinetic code, designed to study turbulence in the edge region of fusion devices. The edge is computationally very challenging, requiring robust algorithms that can handle large-amplitude fluctuations and stable interactions with plasma sheaths. We present an energy-conserving high-order discontinuous Galerkin scheme that solves gyrokinetic equations in Hamiltonian form. Efficiency is improved by a careful choice of basis functions and automatically generated computation kernels. Previous verification tests were performed in the straight-field-line large plasma device [Shi et al., J. Plasma Phys. 83, 905830304 (2017)] and the Texas Helimak, a simple magnetized torus [Bernard et al., Phys. Plasmas 26, 042301 (2019)], including the effect of end-plate biasing on turbulence. Results for the scrape-off layer for NSTX parameters with a model helical magnetic geometry with bad curvature have been obtained [Shi et al., Phys. Plasmas 26, 012307 (2019)]. In this paper, we present algorithms for the two formulations of electromagnetic gyrokinetics: the Hamiltonian and the symplectic. We describe each formulation and show results of benchmark tests. Although our scheme works for the Hamiltonian formulation, the presence of spurious numerical modes for high-β and large $k^2_⊥ρ^2_s$ regimes shows that the symplectic formulation is more robust. We then review our recent algorithm for the symplectic formulation [Mandell et al., J. Plasma Phys. 86, 905860109 (2020)], along with example application of this new capability. Maintaining positivity of the distribution function can be challenging, and we describe a new and novel exponential recovery based algorithm to address this.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Electron plasma wave Thomson scattering on laboratory plasma jets

Plasma jets created from a 15 lm thick Al foil on a 1 MA pulsed power machine were studied using a new electron plasma wave (EPW) Thomson scattering system in conjunction with previously developed ion acoustic wave (IAW) Thomson scattering and interferometry. These diagnostics give multiple ways of measuring the electron temperature and density of the jet. Analysis of the EPW feature found the on-axis density of the jet to be between 5 X 10 18 and 1.4 X 10 19 cm -3 , which either matched or was higher than interferometry measurements. Outside of the jet, both of these diagnostics measured a density of 7 X 10 17 cm -3 . On one shot, the EPW spectral feature showed two pairs of peaks within a 250 lm scattering length on the edge of the jet, which shows that the boundary of the jet ~1 mm radius jet is 0.1 mm. While electron temperature measurements of the plasma jet are complicated by the probe beam producing inverse bremsstrahlung heating of the jet, comparison of the electron temperature measured between IAW and EPW Thomson scattering showed the EPW feature to imply significantly higher electron temperatures than the IAW feature (e.g., 160 eV vs 70 eV in one case). Various sources of this discrepancy (for example, density gradients, collisions, and a lag in ionization) and their impact on the plasma are discussed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Creation of large temperature anisotropies in a laboratory plasma

Ion temperature anisotropy in an expanding magnetized plasma is investigated using laser induced fluorescence. Parallel and perpendicular ion velocity distribution functions (IVDFs) were measured simultaneously with high spatial resolution in the expanding plasma. Large ion temperature anisotropies (T ⊥i /T ∥i ~ 10) are observed in a conical region at the periphery of the expanding plasma plume. A simple 2D Boris stepper model that incorporates the measured electric field structure is able to reproduce the gross features of the measured perpendicular IVDFs. Here, a Nyquist stability analysis of the measured IVDFs suggests that multiple instabilities with k ⊥ρi ~ 1 and k ||ρi ~ 0.2 are likely to be excited in these plasmas.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Compact, portable, laser induced fluorescence diagnostic for laboratory plasma sources

As diagnostic groups are increasingly called upon to participate in experimental campaigns at remote facilities, there is a need to develop portable versions of plasma diagnostic systems. One such diagnostic is laser induced fluorescence (LIF). Here, we describe a portable LIF apparatus that eliminates the need for an optical table, beam splitters, and an optical chopper. All of the light exiting the laser system is coupled through optical fibers to the experiment and housekeeping diagnostics. Here, the collected light is coupled through an optical fiber as well. A key feature is modulation of the tapered amplifier current instead of physical modulation of the laser output. Using this portable LIF system, measurements of ion temperature, ion flow, and relative metastable ion density are reported for two different remote experiments.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗