Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “datasets”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,171 records · Page 65

Advancing Methodologies for Applying Machine Learning and Evaluating Spatiotemporal Models of Fine Particulate Matter (PM 2.5 ) Using Satellite Data Over Large Regions

Reconstructing the distribution of fine particulate matter (PM 2.5 ) in space and time, even far from ground monitoring sites, is an important exposure science contribution to epidemiologic analyses of PM 2.5 health impacts. Flexible statistical methods for prediction have demonstrated the integration of satellite observations with other predictors, yet these algorithms are susceptible to overfitting the spatiotemporal structure of the training datasets. We present a new approach for predicting PM 2.5 using machine-learning methods and evaluating prediction models for the goal of making predictions where they were not previously available. We apply extreme gradient boosting (XGBoost) modeling to predict daily PM 2.5 on a 1 x 1 km 2 resolution for a 13 state region in the Northeastern USA for the years 2000–2015 using satellite-derived aerosol optical depth and implement a recursive feature selection to develop a parsimonious model. We demonstrate excellent predictions of withheld observations but also contrast an RMSE of 3.11 μg/m 3 in our spatial cross-validation withholding nearby sites versus an overfit RMSE of 2.10 μg/m 3 using a more conventional random ten-fold splitting of the dataset. As the field of exposure science moves forward with the use of advanced machine-learning approaches for spatiotemporal modeling of air pollutants, our results show the importance of addressing data leakage in training, overfitting to spatiotemporal structure, and the impact of the predominance of ground monitoring sites in dense urban sub-networks on model evaluation. The strengths of our resultant modeling approach for exposure in epidemiologic studies of PM 2.5 include improved efficiency, parsimony, and interpretability with robust validation while still accommodating complex spatiotemporal relationships.

air pollution↗

Large Contribution of Meteorological Factors to Inter-Decadal Changes in Regional Aerosol Optical Depth

Aerosol optical depth (AOD) has become a crucial metric for assessing global climate change. Although global and regional AOD trends have been studied extensively, it remains unclear what factors are driving the inter-decadal variations in regional AOD and how to quantify the relative contribution of each dominant factor. This study used a long-term (1980–2016) aerosol dataset from the Modern-Era Retrospective Analysis for Research and Applications, version 2 (MERRA-2) reanalysis, along with two satellite-based AOD datasets (MODIS/Terra and MISR) from 2001 to 2016, to investigate the long-term trends in global and regional aerosol loading. Statistical models based on emission factors and meteorological parameters were developed to identify the main factors driving the inter-decadal changes of regional AOD and to quantify their contribution. Evaluation of the MERRA-2 AOD with the ground-based measurements of AERONET indicated significant spatial agreement on the global scale (r= 0.85, root-mean-square error = 0.12, mean fractional error = 38.7 %, fractional gross error = 9.86 % and index of agreement = 0.94). However, when AOD observations from the China Aerosol Remote Sensing Network (CARSNET) were employed for independent verification, the results showed that MERRA-2 AODs generally underestimated CARSNET AODs in China (relative mean bias = 0.72 and fractional gross error =−34.3 %). In general, MERRA-2 was able to quantitatively reproduce the annual and seasonal AOD trends on both regional and global scales, as observed by MODIS/Terra, although some differences were found when compared to MISR. Over the 37-year period in this study, significant decreasing trends were observed over Europe and the eastern United States. In contrast, eastern China and southern Asia showed AOD increases, but the increasing trend of the former reversed sharply in the most recent decade. The statistical analyses suggested that the meteorological parameters explained a larger proportion of the AOD variability (20.4 %–72.8 %) over almost all regions of interest (ROIs) during 1980–2014 when compared with emission factors (0 %–56 %). Further analysis also showed that SO2 was the dominant emission factor, explaining 12.7 %–32.6 % of the variation in AOD over anthropogenic-aerosol-dominant regions, while black carbon or organic carbon was the leading factor over the biomass-burning-dominant (BBD) regions, contributing 24.0 %–27.7 % of the variation. Additionally, wind speed was found to be the leading meteorological parameter, explaining 11.8 %–30.3 % of the variance over the mineral-dust-dominant regions, while ambient humidity (including soil moisture and relative humidity) was the top meteorological parameter over the BBD regions, accounting for 11.7 %–35.5 % of the variation. The results of this study indicate that the variation in meteorological parameters is a key factor in determining the inter-decadal change in regional AOD.

Huizheng Che↗

Assessment of urban aerosol pollution over the Moscow megacity by the MAIAC aerosol product

We estimated the distribution of aerosol optical thickness (AOT) with a spatial resolution of 1 km over the Moscow megacity using the MAIAC aerosol product based on MODIS satellite data (Lyapustin et al., 2018) for the warm period of the year (May–September, 2001–2017). AERONET (Aerosol Robotic Network)-based validation of satellite estimates near the city centre at Moscow_MSU_MO and over the Moscow suburbs at Zvenigorod revealed that MAIAC AOT at 0.47 μm is in agreement with AERONET AOT though underestimated by 0.05–0.1 for AOT < 1 and overestimated for smoke conditions with AOT > 1. The MAIAC AOT biases were almost the same for the Moscow_MSU_MO and Zvenigorod AERONET sites, which indicated that the MAIAC algorithm effectively removed the effect of the bright urban surface in the city centre. For the ground-based measurements, the difference between annual median AOT at Moscow_MO_MSU and Zvenigorod (∆AOT) varied within -0:002 to +0:03, with statistically significant positive bias for most years, and an average ∆AOT was about 0.02. According to the MAIAC dataset, the ∆AOT varied within ±0:01 and was not statistically significant. The ∆AOT started decreasing recently due to intensive urban development of the territory around Zvenigorod and the decrease in pollutant emissions in Moscow, which is mainly caused by the environmental regulations. According to the MAIAC dataset, the most pronounced spatial AOT differences over the territory of Moscow were observed at the 5% quantile level, where they reached 0.05–0.06 over several locations and could be attributed to the stationary sources of aerosol pollution, for example, large areas of construction sites, aerosol pollution from roads and highways, or agriculture activities. The differences between the maximum and the mean AOT for different quantiles, except the 95% quantile, within the Moscow region, were about 0.02–0.04, which could be attributed to the local aerosol sources. The application of the MAIAC algorithm over the whole Moscow region has revealed a decreasing AOT trend over the centre of Moscow and an increasing trend over the “New” Moscow territory which experienced an intensive build-up and agricultural development.

urban aerosol pollution↗

Development and Evaluation of the Raindrop Size Distribution Parameters for the NASA Global Precipitation Measurement Mission Ground Validation Program

The National Aeronautics and Space Administration Global Precipitation Measurement (GPM) mission ground validation program uses dual-polarization radar moments to estimate raindrop size distribution (DSD) parameters, the mass-weighted mean drop diameter Dmass, and normalized intercept parameter NW, to validate the GPM Core Observatory–derived DSD parameters. The disdrometer-based Dmass and NW are derived through empirical relationships between Dmass and differential reflectivity ZDR, and between NW, reflectivity ZH, and Dmass. This study employs large datasets collected from two-dimensional video disdrometers (2DVD) during six different field studies to derive the requisite empirical relationships. The uncertainty of the derived Dmass(ZDR) relationship is evaluated through comparisons of 2DVD-calculated and ZDR-estimated Dmass, where ZDR is calculated directly from 2DVD observations. Similarly, the uncertainty of the NW(ZH, Dmass) relationship is evaluated through 2DVD-calculated and Dmass and ZH-estimated NW, where Dmass and ZH are directly calculated from 2DVD observations. This study also presents the sensitivity of Dmass(ZDR) relationships to climate regime and to disdrometer type after developing three additional Dmass(ZDR) relationships from second-generation Particle Size Velocity (PARSIVEL2) disdrometer (P2) observations collected in the Pacific Northwest, in Iowa, and at Kwajalein Atoll in the tropical Pacific Ocean. The application of P2-derived Dmass(ZDR) relationship based on precipitation in the northwestern United States to P2 observations collected over the tropical ocean resulted in the highest error among comparisons of the three datasets.

Ali Tokay↗

Tonlé Sap Food Security and Agriculture: Evaluating the Effects of Land Use and Hydrological Change on Ecosystem Vitality using Remotely-Sensed Data in the Tonlé Sap Lake Basin

Tonlé Sap Lake, the largest lake in Southeast Asia, is a critical source of fish and freshwater resources for the region. The health of this freshwater system is under pressure from accelerating dam construction, intensifying agriculture, deforestation, and changing climate patterns, forcing tradeoffs between immediate food security and the long-term vitality and productivity of the ecosystem. Efficient freshwater system monitoring is crucial to navigating these challenges. In collaboration with Conservation International, the Cambodian Ministry of Water Resources and Meteorology, and the Tonlé Sap Authority, we developed and tested remotely-sensed proxies for sub-indicators of the Freshwater Health Index (FHI), which is typically calculated using in situ datasets. We used landcover datasets derived from Landsat 5 Thematic Mapper (TM), Landsat 7 Enhanced Thematic Mapper Plus (ETM+), Landsat 8 Operational Land Imager (OLI), PROBA-V Vegetation sensor (VGT), Sentinel-2 Multispectral Imager (MSI), Advanced Very High Resolution Radiometer (AVHRR), and Envisat Medium Resolution Imaging Spectrometer (MERIS) as inputs to calculate land cover naturalness and bank modification. Additionally, we created a lake-level time series using a collection of altimetry data sources to estimate deviation from natural flow. We observed a decrease in landcover naturalness and a breakdown in the volume and regularity of annual lake levels from 2000-2020, reflecting increased pressure on water supply and agricultural productivity. At least 8% of forested areas in the basin were lost and rice harvest intensity increased over the course of the study period. These results will help our partners make informed decisions regarding freshwater management. Furthermore, our remotely-sensed FHI analysis can be replicated in other regions, providing decision makers with a snapshot of freshwater health in data-scarce environments.

Marco Vallejos↗

Triton: Fascinating Moon, Likely Ocean World, Compelling Destination!

Triton is an important signpost in understanding the diverse populations of both Ocean Worlds and Kuiper Belt Objects. As a likely ocean world, it is unique by virtue of its kidnapped history from the Kuiper Belt: its large orbital inclination makes it the only ocean world thought to be primarily heated by obliquity tides (Nimmo and Spencer, 2015). It is volatile-rich due to its formation in the outer Solar System and its unusual surface geology may be the product of cryovolcanism. Observations from New Horizons and Cassini motivate re-examination of Triton datasets and models, with value for comparative planetology of ocean worlds and KBOs, most notably with Europa, Enceladus, Titan, and Pluto. We re-explore old datasets with the new perspective of the importance of ocean worlds in our Solar System and the search for life.

J Castillo-Rogez↗

Colorado Front Range Disasters: Understanding the Impact of Forest Management on the Cameron Peak and CalWood Fire

Along the Colorado Front Range, forest management has gained significant attention due to uncharacteristically large fires that burned late in 2020. The Cameron Peak Fire (largest in Colorado recorded history) and the CalWood Fire collectively burned an estimated 219,019 acres from August through December of 2020. Project partners at the Coalition for the Poudre River Watershed, Colorado State Forest Service, Ben Delatour Scout Ranch, The Nature Conservancy, Colorado Forest Restoration Institute, and Colorado State University were interested in understanding the effectiveness of previous forest treatments in reducing burn severity within the Cameron Peak Fire and the CalWood Fire. We first collated a forest treatment dataset from pre-existing datasets by reclassifying over 29,000 treatments, which occurred across the Northern Colorado Front Range between 1970-2020. Secondly, we mapped three burn severity indices using Landsat 8 OLI and Sentinel-2 MSI Earth observations and compared them to soil burn severity field data. Thirdly, a total of 35 topographic, disturbance, forest structure, and treatment predictor variables were generated across the fires. Finally, we assessed relationships between these predictor variables and burn severity using the random forest algorithm. Model results indicate that the primary drivers of burn severity were elevation and distance to treatment edge for the Cameron Peak Fire and fire area and forest canopy cover for the CalWood Fire. Further analysis of these variables paired with field data is necessary to understand the relationship between burn severity and treatments to guide future restoration efforts, improve forest resiliency, and mitigate fire risks.

Neal Swayze↗

Bias-Correcting Carbon Fluxes Derived From Land-Surface Satellite Data for Retrospective and Near Real-Time Assimilation Systems

The ability to monitor and understand natural and anthropogenic variability in atmospheric carbon dioxide(CO2) is a growing need of many stakeholders across the world. Systems that assimilate satellite observations, given their short latency and dense spatial coverage, into high resolution global models are valuable, if not essential, tools for addressing this need. A notable drawback of modern assimilation systems is the long latency of many vital in-put datasets, e.g., inventories, in situ measurements, and re-processed remote-sensing data can trail the current date by months to years. This paper describes techniques for bias-correcting surface fluxes derived from satellite observations of the Earth’s surface to be consistent with constraints from inventories and in situ CO2 datasets. The techniques are applicable in both short-term forecasts and retrospective simulations, thus taking advantage of the coverage and short latency of satellite data while reproducing the major features of long-term inventory and in situ records. Our approach begins with a standard collection of diagnostic fluxes which incorporate a variety of remote-sensing driver data, viz. vegetation indices, fire radiative power, and nighttime lights. We then apply an empirical sink so that global budgets of the diagnostic fluxes match given atmospheric and oceanic growth rates for each year. This step removes coherent, systematic flux errors that produce biases inCO2which mask the signals an assimilation system hopes to capture. Depending on the simulation mode, the empirical sink uses different choices of atmospheric growth rates: estimates based on observations in retrospective mode and projections based on seasonal fore-casts of sea surface temperature in forecasting mode. The retrospective fluxes, when used in simulations with NASA’s Goddard Earth Observing System (GEOS), reproduce marine boundary layer measurements with comparable skill to those using fluxes from a modern inversion system. The forecasted fluxes show promising accuracy in their application to the analysis of changes in the carbon cycle as they occur.

CO2↗

Calibration of the DSCOVR EPIC Visible and NIR Channels using Multiple LEO Radiometers

The first five years of operation of the Deep Space Climate Observatory (DSCOVR) Earth Polychromatic Imaging Camera (EPIC) at the Lagrange one point have produced results that uniquely complement the data from currently operating low orbit Earth-observing instruments. In this paper we describe an updated unified approach to EPIC calibration. In this approach, calibration coefficients and their trends were obtained by comparing EPIC observations to the measurements from polar orbiting radiometers. In this study L1B reflectances from Moderate Resolution Imaging Spectroradiometer (MODIS) onboard the Aqua and Terra satellites, Multi-angle Imaging Spectroradiometer (MISR) onboard Terra and Visible Infrared Imaging Radiometer (VIIRS) onboard the Suomi National Polar-orbiting Partnership (Suomi NPP) spacecraft were used to infer calibration coefficients for four EPIC visible and near-infrared channels: 443 nm, 551 nm, 680 nm, and 780 nm. EPIC Version three measurements made between June 2015 and August 2020 were used for comparison. The calibration procedure identifies the most homogeneous low Earth orbit radiometer scenes matching scattering angles that are temporarily and spatially collocated with EPIC observations. These scenes are used to determine reflectance to count (R/C) ratios in spectrally analogous channels. Seasonal average R/C ratios were analyzed to obtain EPIC calibration gains and trends. The trends for the full dataset period are not statistically significant except in the 443 nm channel. No significant changes in calibration were found after the instrument’s exit from safe hold in March 2020. The R/C ratios were also used to determine the differences in EPIC gains resulting from separate calibrations: against MODIS Aqua or Terra, as well as against forward or aftward MISR cameras. Statistical tests indicate that the differences between the two datasets are not significant except in the 780 nm channels where Aqua-derived coefficients may be around 2% lower compared to Terra. The dependence of EPIC calibration gains on the instrument scattering angle and on DSCOVR-Earth distance were investigated. Lastly, model Low Earth Orbit (LEO) reflectances calculated to match the EPIC viewing geometry were employed to study how EPIC calibration coefficients depend on EPIC-LEO viewing geometry differences. The effect of LEO and EPIC angular mismatch on calibration was shown to be small.

deep space climate observatory/earth polychromatic↗

NASA GeneLab: Open Science for Life in Space

NASA’s GeneLab helps scientists understand how the fundamental building blocks of life – DNA, RNA, proteins, and metabolites – change from exposure to the space environment including microgravity and cosmic radiation exposure. GeneLab does so by providing fully coordinated epigenomics, genomics, transcriptomics, proteomics, and metabolomics data (collectively known as omics data) alongside essential metadata describing each spaceflight and space-relevant experiment. The open-access GeneLab repository currently consists of over 300 omics datasets generated by biological experiments, involving various model organisms, that are relevant to spaceflight. In order to maximize the intelligibility of these data, particularly for users with limited bioinformatics knowledge, GeneLab has started processing and analyzing these datasets to generate differential gene expression data and identify biological and physiological pathways that are dysregulated as a result of spaceflight. To aide GeneLab’s efforts to harmonize and democratize space-relevant omics data, over 130 scientists have joined one of four GeneLab Analysis Working Groups (Animal AWG, Plant AWG, Microbe AWG, Multi-Omics AWG) and together helped develop and adopted standard data analysis workflows for all data types available in GeneLab. Currently, the GeneLab Data System includes a data repository with federated search capability, an online controlled-access toolshed powered by "Galaxy" for users to process data with vetted standard workflows, a workspace for data sharing, a data submission portal, and the ability to browse and visualize transcriptomics processed data. The user interface was designed to be accessible to a broad variety of users, including high school and college students who can use it to learn about omics data analysis and space biology. The visualization portal enhances GeneLab’s ability to democratize omics data by removing the need for bioinformatics expertise to interpret transcriptomics data hosted on GeneLab. This presentation will provide an over-view of NASA’s GeneLab including how to navigate the GeneLab Data System and will conclude by providing resources for opportunities to work with GeneLab and NASA at large.

Amanda M Saravia-Butler↗

Improved representation of the global dust cycle using observational constraints on dust properties and abundance

Even though desert dust is the most abundant aerosol by mass in Earth's atmosphere, atmospheric models struggle to accurately represent its spatial and temporal distribution. These model errors are partially caused by fundamental difficulties in simulating dust emission in coarse-resolution models and in accurately representing dust microphysical properties. Here we mitigate these problems by developing a new methodology that yields an improved representation of the global dust cycle. We present an analytical framework that uses inverse modeling to integrate an ensemble of global model simulations with observational constraints on the dust size distribution, extinction efficiency, and regional dust aerosol optical depth. We then compare the inverse model results against independent measurements of dust surface concentration and deposition flux and find that errors are reduced by approximately a factor of 2 relative to current model simulations of the Northern Hemisphere dust cycle. The inverse model results show smaller improvements in the less dusty Southern Hemisphere, most likely because both the model simulations and the observational constraints used in the inverse model are less accurate. On a global basis, we find that the emission flux of dust with a geometric diameter up to 20 µm (PM20) is approximately 5000 Tg yr−1, which is greater than most models account for. This larger PM20 dust flux is needed to match observational constraints showing a large atmospheric loading of coarse dust. We obtain gridded datasets of dust emission, vertically integrated loading, dust aerosol optical depth, (surface) concentration, and wet and dry deposition fluxes that are resolved by season and particle size. As our results indicate that this dataset is more accurate than current model simulations and the MERRA-2 dust reanalysis product, it can be used to improve quantifications of dust impacts on the Earth system.

Dust cycle↗

Gas-Particle Interaction Model Development in Plume Surface Interaction Erosion and Cratering

As part of the Game Changing Development (GCD) Program, funded by NASA’s Space Technology Mission Directorate (STMD), the development of simulation capability for the prediction of extra-terrestrial Plume Surface Interaction (PSI) environments has been undertaken by the Fluid Dynamics Branch at NASA/MSFC. The GCD PSI Project, planned to be completed over a four year period, contains a Predictive Simulation Capability (PSC) Element focused on creating simulation capability for the reliable and accurate prediction of PSI in Martian (~650 Pa) and Lunar (vacuum) ambient environments. In addition to the PSC Element, the GCD Program also contains a companion Ground Testing Element for development of focused datasets for validation of predictive capability as well as a Flight-focused Instrumentation Element. This paper describes the activities and accomplishments of the past year in the gas-particle interaction modeling portion of the GCD PSI project. The objectives of this task are to investigate and construct models of particle drag and gas-particle cloud interactions leading to what is known as particle turbulent kinetic energy (PTKE). While drag on a lone particle suspended in a flow gas of gas is well-known, the drag and drag-induced dynamics of a cloud of particles in a gas flow are not. The PSC element of the PSI project requires models of gas-particle cloud interactions to implement in the Gas Granular Flow Solver (GGFS) in order to arrive at a predictive simulation capability for PSI-induced soil erosion, cratering and ejecta transport. Experiments of dilute mixtures of soil particles in supersonic gas flow are being conducted at Johns Hopkins University in order to provide a dataset describing gas-particle cloud interactions. Augmented by a separate funding source are efforts to perform small-scale particle-resolved direct numerical simulations (PR-DNS) and larger scale Eulerian-Lagrangian simulations. Together, these experiments and simulations are being used to devise models of particle cloud drag and particle cloud drag-induced dynamics. The final product of these efforts will be particle drag models suitable for implementation into the GGFS application and a PTKE model suitable for the same purpose.

Jeff West↗

Mitochondria Dysfunction Central in Driving Health Risks Associated with Spaceflight

Background: Determining the biological impact of spaceflight through novel approaches is essential to reduce the health risks to astronauts for long-term space missions. The current established health risks due to spaceflight are only reflecting known symptomatic and physiologic responses and do not reflect early onset of other potential diseases. There are many unknown variables which still need to be identified to fully understand the health impacts due to the environmental factors in space. Materials and Methods: One method to uncover potential novel biological mechanisms responsible for health risks in astronauts is by utilizing NASA’s GeneLab platform (genelab.nasa.gov). GeneLab is public repository that hosts multiple omics datasets generated from space biology experiments that include experiments flown in space, simulated cosmic radiation experiments, and simulated microgravity experiments. This presentation will provide an example of analysis and novel hypothesis generation that is being produced with GeneLab datasets. A comprehensive multi-omics approach was implemented correlating transcriptomics, proteomics, metabolomics, and methylation analysis. Results: We found that cells have stronger overall biological response than the tissues to spaceflight, with mitochondrial activity and innate immunity pathways being heavily impacted. NASA Twin Study results are consistent with a specific alteration in mitochondrial ATP production. Our results indicate that the space environment can directly induce mitochondrial damage, with mitochondrial dysfunctions being a cause for chronic inflammation and both being involved in the development of metabolic disorders that cause changes in lipid metabolism. We also found biological changes occurring during spaceflight with cell cycle, circadian rhythm and olfactory activity pathways can also influence and be influenced by alterations on mitochondrial activity

Afshin Beheshti↗

A Method for Validating Causal Diagrams of Human Health Risk in Space Flight

The complexity of cause-and-effect relationships between spaceflight hazards and resulting health conditions clouds understanding of the totality of human system risk in space. In response, NASA has introduced Directed Acyclic Graphs (causal diagrams) into the human systems risk management process. These diagrams allow for a common understanding of the mechanisms that lead from unique hazards of spaceflight to the health outcomes important to agencies and astronauts. However, the paucity of available biomedical data from spaceflight creates a need for methods of validating causal models that can accommodate data from spaceflight model analogs. Here we outline one approach utilizing open-access rodent bone datasets from the Ames Life Sciences Data Archive. The properties of directed acyclic graphs themselves can provide an epistemological and statistical framework for validation of a priori causal representations of human system risk in space flight. The assumed causal connections on the graph creates sets of logical implications: variables that – if the causal diagram is correct – should be correlated, as well as sets that should be conditionally independent. By testing these implied correlations and conditional independencies both statistically and heuristically, we can provide evidence for or against specific causal pathways on the causal diagram. In addition to validation of expert-generated causal diagrams, machine learning techniques can learn the most likely structure of a causal diagram from a given dataset. Comparison with and reconciliation between machine-learned causal diagrams and expert-generated diagrams is another technique for challenging assumptions and improving our understanding of causal mechanisms. Accurately representing complex causation is essential to systemic understanding of human health risks in space travel. Having a robust system of validating causal diagrams helps us arrive at more accurate representations of causal systems. This process will be integral to developing the countermeasures necessary for extended exploration of the moon and Mars.

Robert Reynolds↗

An Information Theory Approach to Physical Domain Discovery

The project of physics discovery is often equivalent to finding the most concise description of a physical system. The description with optimum predictive capability for a dataset generated by a physical system is one that minimizes both predictive error on the dataset and the complexity of the description. The discovery of the governing physics of a system can therefore be viewed as a mathematical optimization problem. We outline here a method to optimize the description of arbitrarily complex physical systems by minimizing the entropy of the description of the system. The Recursive Domain Partitioning (RDP) procedure finds the optimum partitioning of each physical domain into subdomains, and the optimum predictive function within each subdomain. Penalty functions are introduced to limit the complexity of the predictive function within each domain. Examples are shown in 1D and 2D. In 1D, the technique effectively discovers the elastic and plastic regions within a stress-strain curve generated by simulations of amorphous carbon material, while in 2D the technique discovers the free-flow region and the inertially-obstructed flow region in the simulation of fluid flow across a plate.

Daniel Shea↗

Inception of a Spaceflight-specific Mouse to Human Expression Profiling Translation Model

Rodents are foundational model organisms often utilized due to their seemingly analogous morphologies and biological responses to humans. However, recent studies have demonstrated that murine model data are limited in their applicability, particularly in inflammatory disease. In space studies, accurately predicting human response from mouse data is critical due to extreme limiting factors in both rodent and human spaceflight research. With successful prediction, spaceflight ailments can be predicted and prevented while respecting the constraints of the spaceflight industry and minimizing danger to humans. To do so, novel methodologies must be developed that predict human response from murine data after considering biological differences between rodents and humans in spaceflight. After considering terrestrial models, we determined that a spaceflight-based expression profiting translation tool should be created to accurately capture predictions of human gene expression in spaceflight from mouse data. To prepare to build this model, we organized known human spaceflight risks, chose analog human diseases as training data categories, then identified existing RNASeq disease datasets from GEO as potential training data. In addition, we classified existing Genelab mouse differential gene expression datasets for use as experimental data.

Translation↗

Using Machine Learning to Classify Earth Science Articles

Developing a machine learning pipeline to automatic the classification of research article topics, where topics are geophysical descriptors. The resulting classified documents will be added to the Usage-Based Discovery graph database, along with corresponding NASA Earth Science datasets, with the intent of linking the NASA data product with uses of it that can be searched by topic. The project will aid in the following goals (1) creating a wider representation of how and how much NASA Earth Science data products are used, (2) identifying when NASA data products have been used even when they are not clearly cited, and (3) providing the UBD search tool end-user with set of recommended datasets based on a given topic query.

Machine Learning↗

One- and Two-Band Sensors and Algorithms to Derive aCDOM(440) from Global Above- and In-Water Optical Observations

The colored (or chromophoric, depending on the literature) dissolved organic matter (CDOM) spectral absorption coefficient, aCDOM(λ), is a variable of global interest that has broad application in the study of biogeochemical processes. Within the funding for scientific research, there is an overarching trend towards increasing the scale of observations both temporally and spatially, while simultaneously reducing the cost per sample, driving a systemic shift towards autonomous sensors and observations. Legacy aCDOM(λ) measurement techniques can be cost-prohibitive and do not lend themselves toward autonomous systems. Spectrally rich datasets carefully collected with advanced optical systems in diverse locations that span a global range of water bodies, in conjunction with appropriate quality assurance and processing, allow for the analysis of methods and algorithms to estimate aCDOM(440) from spectrally constrained one- and two-band subsets of the data. The resulting algorithms were evaluated with respect to established fit-for-purpose criteria as well as quality assured archival data. Existing and proposed optical sensors capable of exploiting the algorithms and intended for autonomous platforms are identified and discussed. One-band in-water algorithms and two-band above-water algorithms showed the most promise for practical use (accuracy of 3.0% and 6.5%, respectively), with the latter demonstrated for an airborne dataset.

ocean color↗