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At least 1,171 records · Page 65

Lloviu virus VP24 and VP35 proteins function as innate immune antagonists in human and bat cells

Lloviu virus (LLOV) is a new member of the filovirus family that also includes Ebola virus (EBOV) and Marburg virus (MARV). LLOV has not been cultured; however, its genomic RNA sequence indicates the coding capacity to produce homologs of the EBOV and MARV VP24, VP35, and VP40 proteins. EBOV and MARV VP35 proteins inhibit interferon (IFN)-alpha/beta production and EBOV VP35 blocks activation of the antiviral kinase PKR. The EBOV VP24 and MARV VP40 proteins inhibit IFN signaling, albeit by different mechanisms. Here we demonstrate that LLOV VP35 suppresses Sendai virus induced IFN regulatory factor 3 (IRF3) phosphorylation, IFN-α/β production, and PKR phosphorylation. Additionally, LLOV VP24 blocks tyrosine phosphorylated STAT1 binding to karyopherin alpha 5 (KPNA5), STAT1 nuclear accumulation, and IFN-induced gene expression. LLOV VP40 lacks detectable IFN antagonist function. These activities parallel EBOV IFN inhibitory functions. EBOV and LLOV VP35 and VP24 proteins also inhibit IFN responses in bat cells. These data suggest that LLOV infection will block innate immune responses in a manner similar to EBOV. - Highlights: • Lloviu virus (LLOV) is a new member of the filovirus family. • LLOV VP35 blocks IRF3 phosphorylation, IFN-α/β production and PKR phosphorylation. • LLOV VP24 inhibits IFN responses by targeting phospho-STAT1 KPNA interaction. • Infection by LLOV may block innate immune responses in a manner similar to EBOV.

60 APPLIED LIFE SCIENCES↗

Deep Learning and Photogrammetric Reconstruction for Automated Crack Detection and Dimensional Measurement in Mining Operations

Surface crack detection and dimensional measurement at active mining sites present significant safety and operational challenges. Manual inspection methods are labor-intensive, spatially incomplete, and expose personnel to hazardous environments, while existing automated approaches have been developed primarily for concrete civil infrastructure and have not been validated on the complex, variable surfaces characteristic of mining environments. This dissertation presents an automated pipeline that integrates deep learning semantic segmentation with Structure-from-Motion photogrammetry to detect surface cracks and measure their aperture, length, and vertical displacement from standard RGB imagery acquired during routine Uncrewed Aerial Vehicle (UAV) survey operations, without requiring additional sensor hardware or manual measurement. The pipeline combines a U-Net architecture with an EfficientNet-B0 encoder, pretrained on the SDNET2018 concrete crack dataset and fine-tuned on a mining-specific dataset spanning laboratory concrete specimens, coal refuse impoundment embankments, and post-blast limestone quarry benches. Photogrammetric reconstruction is performed using COLMAP Structure-from-Motion and Multi-View Stereo, with crack segmentation masks projected into the reconstructed point cloud to enable three-dimensional vertical displacement measurement through local plane fitting and bimodal surface detection. The pipeline was validated across 36 controlled laboratory specimens at three imaging distances and four vertical displacement levels, achieving aperture measurement RMSE of 0.047 cm and R² of 0.954, and vertical displacement RMSE of 0.140 cm and R² of 0.966, against independent caliper measurements. Field application at a coal refuse impoundment in southwestern Pennsylvania detected 71 crack components across the embankment crest, with a dominant longitudinal crack exhibiting aperture values reaching 28 cm and a 95th percentile vertical displacement of 35.53 cm, consistent in magnitude and spatial distribution with simultaneously acquired LiDAR-derived estimates. Application across four post-blast limestone quarry bench datasets in California successfully characterized blast-induced fracture networks at ground sampling distances ranging from 0.59 to 1.23 cm/pixel, with detected crack geometries physically consistent with observable surface conditions at each site. The results demonstrate that deep learning-based crack detection and photogrammetric measurement can be integrated into routine UAV inspection workflows at mining sites, providing repeatable, scalable, and quantitative crack characterization across surface types, crack scales, and displacement magnitudes not previously addressed in the literature. The pipeline requires no dedicated surveying equipment beyond the UAV platforms already deployed at mine sites for survey and monitoring purposes, supporting practical adoption within existing operational workflows.

Crack detection, Dimensional Measurement↗

Train Traffic as a Powerful Noise Source for Monitoring Active Faults With Seismic Interferometry

Laboratory experiments report that detectable seismic velocity changes should occur in the vicinity of fault zones prior to earthquakes. However, operating permanent active seismic sources to monitor natural faults at seismogenic depth is found to be nearly impossible to achieve. We show that seismic noise generated by vehicle traffic, and especially heavy freight trains, can be turned into a powerful repetitive seismic source to continuously probe the Earth's crust at a few kilometers depth. Results of an exploratory seismic experiment in Southern California demonstrate that correlations of train-generated seismic signals allow daily reconstruction of direct P body waves probing the San Jacinto Fault down to 4-km depth. This new approach may facilitate monitoring most of the San Andreas Fault system using the railway and highway network of California.

58 GEOSCIENCES↗

DENSE OPTICAL AND NEAR-INFRARED MONITORING OF CTA 102 DURING HIGH STATE IN 2012 WITH OISTER: DETECTION OF INTRA-NIGHT ''ORPHAN POLARIZED FLUX FLARE''

CTA 102, classified as a flat spectrum radio quasar at z = 1.037, produced an exceptionally bright optical flare in 2012 September. Following the Fermi Large Area Telescope detection of enhanced {gamma}-ray activity, we closely monitored this source in the optical and near-infrared bands for the 10 subsequent nights using 12 telescopes in Japan and South Africa. On MJD 56197 (2012 September 27, four to five days after the peak of bright {gamma}-ray flare), polarized flux showed a transient increase, while total flux and polarization angle (PA) remained almost constant during the ''orphan polarized-flux flare.'' We also detected an intra-night and prominent flare on MJD 56202. The total and polarized fluxes showed quite similar temporal variations, but the PA again remained constant during the flare. Interestingly, the PAs during the two flares were significantly different from the jet direction. The emergence of a new emission component with a high polarization degree (PD) up to 40% would be responsible for the observed two flares, and such a high PD indicates the presence of a highly ordered magnetic field at the emission site. We argue that the well-ordered magnetic field and even the observed directions of the PA, which is grossly perpendicular to the jet, are reasonably accounted for by transverse shock(s) propagating down the jet.

79 ASTRONOMY AND ASTROPHYSICS↗

The Detectability of Radio Auroral Emission from Proxima b

Magnetically active stars possess stellar winds whose interactions with planetary magnetic fields produce radio auroral emission. We examine the detectability of radio auroral emission from Proxima b, the closest known exosolar planet orbiting our nearest neighboring star, Proxima Centauri. Using the radiometric Bode’s law, we estimate the radio flux produced by the interaction of Proxima Centauri’s stellar wind and Proxima b’s magnetosphere for different planetary magnetic field strengths. For plausible planetary masses, Proxima b could produce radio fluxes of 100 mJy or more in a frequency range of 0.02–3 MHz for planetary magnetic field strengths of 0.007–1 G. According to recent MHD models that vary the orbital parameters of the system, this emission is expected to be highly variable. This variability is due to large fluctuations in the size of Proxima b’s magnetosphere as it crosses the equatorial streamer regions of dense stellar wind and high dynamic pressure. Using the MHD model of Garraffo et al. for the variation of the magnetosphere radius during the orbit, we estimate that the observed radio flux can vary nearly by an order of magnitude over the 11.2-day period of Proxima b. The detailed amplitude variation depends on the stellar wind, orbital, and planetary magnetic field parameters. We discuss observing strategies for proposed future space-based observatories to reach frequencies below the ionospheric cutoff (∼10 MHz), which would be required to detect the signal we investigate.

79 ASTRONOMY AND ASTROPHYSICS↗

VLA observations of an unbiased sample of extragalactic X-ray sources

Results are presented of a Very Large Array survey at 6 cm of an unbiased sample of extragalactic X-ray sources serendipitously discovered with the Einstein X-ray Observatory. Fourteen of 42 X-ray sources are detected in the radio down to a limiting sensitivity of 1-2 mJy. Detections include eight of 31 examined active galactic nuclei (AGN-quasars or Seyferts), five of eight clusters of galaxies and one BL Lac object. The radio detection rate of X-ray selected AGNs is higher than that of optically selected AGNs, suggesting that a physical link between radio and X-ray emission is present. The radio properties of the X-ray selected clusters are similar to those of optically selected Abell clusters.

Feigelson, E. D.↗

BeppoSAX Observations of the SGR 1900+14 in Quiescence and During an Active Period

We present results from two Beppo SAX Narrow Field Instrument (NFI) observations of SGR-1900+14 made during a quiescent and an active period of the source. We detect pulsations in the 1997 May 12-13 observation (quiescence) at 5.157190(7) sec and the 1998 September 15-16 observation (active period) at 5.16026](12) sec. Using results reported by Hurley et al. (1999a), we establish a long-term spin down rate during quiescence of 5.82(2)-approx. times 10(exp -11) s/s which implies a dipole magnetic field of sim 5.5 approx. times 10(exp 14) G. We confirm deviations from a constant spin down rate during the active period. We also find spectral similarities between SGR-1900+14 in quiescence and anomalous X-ray pulsars (AXPs).

Woods, Peter↗

Evaluation of the MODIS Collection 6 Multilayer Cloud Detection Algorithm Through Comparisons with Cloudsat Cloud Profiling Radar and CALIPSO CALIOP Products

Since multilayer cloud scenes are common in the atmosphere and can be an important source of uncertainty in passive satellite sensor cloud retrievals, the MODIS MOD06 and MYD06 standard cloud optical property products include a multilayer cloud detection algorithm to assist with data quality assessment. This paper presents an evaluation of the Aqua MODIS MYD06 Collection 6 multilayer cloud detection algorithm through comparisons with active Cloud Profiling Radar (CPR) and Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) products that have the ability to provide cloud vertical distributions and directly classify multilayer cloud scenes and layer properties. To compare active sensor products with an imager such as MODIS, it is first necessary to define multilayer clouds in the context of their radiative impact on cloud retrievals. Three main parameters have thus been considered in this evaluation: (1) the maximum separation distance between two cloud layers, (2) the thermodynamic phase of those layers and (3) the upper-layer cloud optical thickness. The impact of including the Pavolonis–Heidinger multilayer cloud detection algorithm, introduced in Collection 6, to assist with multilayer cloud detection has also been assessed. For the year 2008, the MYD06 C6 multilayer cloud detection algorithm identifies roughly 20% of all cloudy pixels as multilayer (decreasing to about 13% if the Pavolonis–Heidinger algorithm output is not used). Evaluation against the merged CPR and CALIOP2B-CLDCLASS-lidar product shows that the MODIS multilayer detection results are quite sensitive to how multilayer clouds are defined in the radar and lidar product and that the algorithm performs better when the optical thickness of the upper cloud layer is greater than about 1.2 with a minimum layer separation distance of 1 km. Finally, we find that filtering the MYD06 cloud optical properties retrievals using the multilayer cloud flag improves aggregated statistics, particularly for ice cloud effective radius.

MODIS↗

Quench protection for high-temperature superconductor cables using active control of current distribution

Superconducting magnets of future fusion reactors are expected to rely on composite high-temperature superconductor (HTS) cable conductors. In presently used HTS cables, current sharing between components is limited due to poorly defined contact resistances between superconducting tapes or by design. The interplay between contact and termination resistances is the defining factor for power dissipation in these cables and ultimately defines their safe operational margins. However, the current distribution between components along the composite conductor and inside its terminations is a priori unknown, and presently, no means are available to actively tune current flow distribution in real-time to improve margins of quench protection. Also, the lack of ability to electrically probe individual components makes it impossible to identify conductor damage locations within the cable. In this work, we address both problems by introducing active current control of current distribution between components using cryogenically operated metal-oxide-semiconductor-field-effect transistors (MOSFETs). We demonstrate through simulation and experiments how real-time current controls can help to drastically reduce heat dissipation in a developing hot spot in a two-conductor model system and help identify critical current degradation of individual cable components. Finally, prospects of other potential uses of MOSFET devices for improved voltage detection, AC loss-driven active quench protection, and remnant magnetization reduction in HTS magnets are also discussed.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

LeTID-Affected Cells from a Utility-Scale Photovoltaic System Characterized by Deep Level Transient Spectroscopy

Photovoltaic modules from a utility-scale field experienced power loss by light- and elevated temperature-induced degradation (LeTID). Samples of one of the affected monocrystalline silicon cells were cored and extracted from the module packaging and encapsulation. One of the cell fragments was processed using a regeneration cycle of applying short-circuit-rated current in forward bias at 85 degrees C for 2 weeks, while the other fragment was kept in its outdoor-degraded LeTID state. Both samples were scribed to form 2-mm diameter isolated areas using a femtosecond-pulse-width laser micromachining system. Both isolated areas contained front grid line segments which were wire bonded to larger contact pads, and the samples were probed in a cryostat linked to a deep-level transient spectroscopy (DLTS) system. Using DLTS, a majority-carrier, hole-trap defect was detected on each sample with an activation energy of 0.42 eV. The LeTID-degraded sample, however, had a larger signal corresponding to a trap density of 1.1x10^13 cm-3, which was about five times larger than the 2.1x10^12 cm-3 trap density of the regenerated sample.

charge carrier lifetime↗

Source localization of brain activity using helium-free interferometer

To detect extremely small magnetic fields generated by the human brain, currently all commercial magnetoencephalography (MEG) systems are equipped with low-temperature (low-T{sub c}) superconducting quantum interference device (SQUID) sensors that use liquid helium for cooling. The limited and increasingly expensive supply of helium, which has seen dramatic price increases recently, has become a real problem for such systems and the situation shows no signs of abating. MEG research in the long run is now endangered. In this study, we report a MEG source localization utilizing a single, highly sensitive SQUID cooled with liquid nitrogen only. Our findings confirm that localization of neuromagnetic activity is indeed possible using high-T{sub c} SQUIDs. We believe that our findings secure the future of this exquisitely sensitive technique and have major implications for brain research and the developments of cost-effective multi-channel, high-T{sub c} SQUID-based MEG systems.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

SU-E-I-65: The Joint Commission's Requirements for Annual Diagnostic Physics Testing of Nuclear Medicine Equipment, and a Clinically Relevant Methodology for Testing Low-Contrast Resolution

Purpose: To introduce the Joint Commission's requirements for annual diagnostic physics testing of all nuclear medicine equipment, effective 7/1/2014, and to highlight an acceptable methodology for testing lowcontrast resolution of the nuclear medicine imaging system. Methods: The Joint Commission's required diagnostic physics evaluations are to be conducted for all of the image types produced clinically by each scanner. Other accrediting bodies, such as the ACR and the IAC, have similar imaging metrics, but do not emphasize testing low-contrast resolution as it relates clinically. The proposed method for testing low contrast resolution introduces quantitative metrics that are clinically relevant. The acquisition protocol and calculation of contrast levels will utilize a modified version of the protocol defined in AAPM Report #52. Results: Using the Rose criterion for lesion detection with a SNRpixel = 4.335 and a CNRlesion = 4, the minimum contrast levels for 25.4 mm and 31.8 mm cold spheres were calculated to be 0.317 and 0.283, respectively. These contrast levels are the minimum threshold that must be attained to guard against false positive lesion detection. Conclusion: Low contrast resolution, or detectability, can be properly tested in a manner that is clinically relevant by measuring the contrast level of cold spheres within a Jaszczak phantom using pixel values within ROI's placed in the background and cold sphere regions. The measured contrast levels are then compared to a minimum threshold calculated using the Rose criterion and a CNRlesion = 4. The measured contrast levels must either meet or exceed this minimum threshold to prove acceptable lesion detectability. This research and development activity was performed by the authors while employed at West Physics Consulting, LLC. It is presented with the consent of West Physics, which has authorized the dissemination of the information and/or techniques described in the work.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Immunocytochemical localization of latent transforming growth factor-beta1 activation by stimulated macrophages

Transforming growth factor-beta1 (TGF-beta) is secreted in a latent form consisting of mature TGF-beta noncovalently associated with its amino-terminal propeptide, which is called latency associated peptide (LAP). Biological activity depends upon the release of TGF-beta from the latent complex following extracellular activation, which appears to be the key regulatory mechanism controlling TGF-beta action. We have identified two events associated with latent TGF-beta (LTGF-beta) activation in vivo: increased immunoreactivity of certain antibodies that specifically detect TGF-beta concomitant with decreased immunoreactivity of antibodies to LAP. Macrophages stimulated in vitro with interferon-gamma and lipopolysaccharide reportedly activate LTGF-beta via cell membrane-bound protease activity. We show through dual immunostaining of paraformaldehyde-fixed macrophages that such physiological TGF-beta activation is accompanied by a loss of LAP immunoreactivity with concomitant revelation of TGF-beta epitopes. The induction of TGF-beta immunoreactivity colocalized with immunoreactive betaglycan/RIII in activated macrophages, suggesting that LTGF-beta activation occurs on the cell surface. Confocal microscopy of metabolically active macrophages incubated with antibodies to TGF-beta and betaglycan/RIII prior to fixation supported the localization of activation to the cell surface. The ability to specifically detect and localize LTGF-beta activation provides an important tool for studies of its regulation.

NASA Discipline Radiation Health↗

Effect of sulfur content in a sulfur-activated carbon composite on the electrochemical properties of a lithium/sulfur battery

Highlights: • The content of sulfur in activated carbon was controlled by solution process. • The sulfur electrode with low sulfur content shows the best performance. • The Li/S battery has capacity of 1360 mAh/g at 1 C and 702 mAh/g at 10 C. - Abstract: The content of sulfur in sulfur/activated carbon composite is controlled from 32.37 wt.% to 55.33 wt.% by a one-step solution-based process. When the sulfur content is limited to 41.21 wt.%, it can be loaded into the pores of an activated carbon matrix in a highly dispersed state. On the contrary, when the sulfur content is 55.33 wt.%, crystalline sulfur can be detected on the surface of the activated carbon matrix. The best electrochemical performance can be obtained for a sulfur electrode with the lowest sulfur content. The sulfur/activated carbon composite with 32.37 wt.% sulfur afforded the highest first discharge capacity of 1360 mAh g{sup −1} at 1 C rate and a large reversible capacity of 702 mAh g{sup −1} at 10 C (16.75 A/g)

36 MATERIALS SCIENCE↗

Prostaglandin E2 and the protein kinase A pathway mediate arachidonic acid induction of c-fos in human prostate cancer cells

Arachidonic acid (AA) is the precursor for prostaglandin E2 (PGE2) synthesis and increases growth of prostate cancer cells. To further elucidate the mechanisms involved in AA-induced prostate cell growth, induction of c-fos expression by AA was investigated in a human prostate cancer cell line, PC-3. c-fos mRNA was induced shortly after addition of AA, along with a remarkable increase in PGE2 production. c-fos expression and PGE2 production induced by AA was blocked by a cyclo-oxygenase inhibitor, flurbiprofen, suggesting that PGE2 mediated c-fos induction. Protein kinase A (PKA) inhibitor H-89 abolished induction of c-fos expression by AA, and partially inhibited PGE2 production. Protein kinase C (PKC) inhibitor GF109203X had no significant effect on c-fos expression or PGE2 production. Expression of prostaglandin (EP) receptors, which mediate signal transduction from PGE2 to the cells, was examined by reverse transcription polymerase chain reaction in several human prostate cell lines. EP4 and EP2, which are coupled to the PKA signalling pathway, were expressed in all cells tested. Expression of EP1, which activates the PKC pathway, was not detected. The current study showed that induction of the immediate early gene c-fos by AA is mediated by PGE2, which activates the PKA pathway via the EP2/4 receptor in the PC-3 cells.

NASA Discipline Cell Biology↗

A standardized quantitative analysis strategy for stable isotope probing metagenomics

ABSTRACT Stable isotope probing (SIP) facilitates culture-independent identification of active microbial populations within complex ecosystems through isotopic enrichment of nucleic acids. Many DNA-SIP studies rely on 16S rRNA gene sequences to identify active taxa, but connecting these sequences to specific bacterial genomes is often challenging. Here, we describe a standardized laboratory and analysis framework to quantify isotopic enrichment on a per-genome basis using shotgun metagenomics instead of 16S rRNA gene sequencing. To develop this framework, we explored various sample processing and analysis approaches using a designed microbiome where the identity of labeled genomes and their level of isotopic enrichment were experimentally controlled. With this ground truth dataset, we empirically assessed the accuracy of different analytical models for identifying active taxa and examined how sequencing depth impacts the detection of isotopically labeled genomes. We also demonstrate that using synthetic DNA internal standards to measure absolute genome abundances in SIP density fractions improves estimates of isotopic enrichment. In addition, our study illustrates the utility of internal standards to reveal anomalies in sample handling that could negatively impact SIP metagenomic analyses if left undetected. Finally, we present SIPmg , an R package to facilitate the estimation of absolute abundances and perform statistical analyses for identifying labeled genomes within SIP metagenomic data. This experimentally validated analysis framework strengthens the foundation of DNA-SIP metagenomics as a tool for accurately measuring the in situ activity of environmental microbial populations and assessing their genomic potential. IMPORTANCE Answering the questions, “who is eating what?” and “who is active?” within complex microbial communities is paramount for our ability to model, predict, and modulate microbiomes for improved human and planetary health. These questions can be pursued using stable isotope probing to track the incorporation of labeled compounds into cellular DNA during microbial growth. However, with traditional stable isotope methods, it is challenging to establish links between an active microorganism’s taxonomic identity and genome composition while providing quantitative estimates of the microorganism’s isotope incorporation rate. Here, we report an experimental and analytical workflow that lays the foundation for improved detection of metabolically active microorganisms and better quantitative estimates of genome-resolved isotope incorporation, which can be used to further refine ecosystem-scale models for carbon and nutrient fluxes within microbiomes.

54 ENVIRONMENTAL SCIENCES↗

Forecasting Rates of Volcanic Activity on Terrestrial Exoplanets

Similar to the planets and moons in our solar system, terrestrial exoplanets may be shaped by volcanism and tectonics. The magnitudes and rates of geological activity on terrestrial exoplanets will be intimately linked to their sizes and internal heating rates, and can either facilitate, or preclude, the existence of habitable environments. In order to place bounds on the potential for such activity, we estimate total internal heating rates for 52 exoplanets, with masses and radii up to ~ 8M(sub E) and 2R(sub E), respectively, assuming that internal heating is drawn from both radiogenic and tidal sources. We then compare these internal heating rates to those of the bodies in our solar system in an attempt to constrain the rates of volcanic activity on extrasolar worlds. We find that all of the exoplanets surveyed are likely to exhibit volcanic activity at their surfaces. We also find that at least 25% of the of the planets in our study may be extrasolar ocean worlds, the majority of which may contain internal oceans beneath layers of surface ice. These planets may be similar in structure to the icy moons of the giant planets and may have persistent cryovolcanic activity at their surfaces. Volcanic activity on exoplanets could be detected by next-generation space telescopes in transit spectra. In the case of planets with densities and/or effective temperatures that are consistent with H2O-rich compositions, spectral identification of excess water vapor and other molecules that are explosively vented into space during cryovolcanic eruptions could serve as a way to infer the presence of subsurface oceans, and therefore indirectly assess their habitability. Considering the implications for habitability, our results suggest that characterizing Earth-like exoplanets in terms of the potential for geological activity at their surfaces should be a priority in the coming years.

Lynnae C Quick↗

Chemical Imaging for In Situ Detection and Discrimination of Aquatic Toxins Targeting Voltage Gated Sodium Channels

Biologically derived neurotoxins from cyanobacteria and algae impact environmental resources in addition to being considered a potential biological threat to human and animal health. Activity based assays are essential to detecting and responding to toxic neurotoxin events either naturally occurring or deliberate. Two toxins of interest include saxitoxin and brevetoxin. These toxins bind to and alter the function of voltage-gated sodium channels (NaV channels) which are essential for generating cell membrane action potential. We report the development and refinement of a System for Analysis at Liquid Vacuum Interface (SALVI) to assess the functional activity of saxitoxin and brevetoxin. This approach utilizes a vacuum-compatible microfluidic reactor that permits analysis at the liquid vacuum interface of human derived cells with a neurotoxin of interest in a biologically relevant environment.

54 ENVIRONMENTAL SCIENCES↗