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At least 1,153 records · Page 64

Spatial Variation of Soil CO 2 , CH 4 and N 2 O Fluxes Across Topographical Positions in Tropical Forests of the Guiana Shield

The spatial variation of soil greenhouse gas fluxes (GHG; carbon dioxide—CO 2 , methane—CH 4 and nitrous oxide—N 2 O) remains poorly understood in highly complex ecosystems such as tropical forests. Here, we used 240 individual flux measurements of these three GHGs from different soil types, at three topographical positions and in two extreme hydric conditions in the tropical forests of the Guiana Shield (French Guiana, South America) to (1) test the effect of topographical positions on GHG fluxes and (2) identify the soil characteristics driving flux variation in these nutrient-poor tropical soils. Surprisingly, none of the three GHG flux rates differed with topographical position. CO 2 effluxes covaried with soil pH, soil water content (SWC), available nitrogen and total phosphorus. The CH 4 fluxes were best explained by variation in SWC, with soils acting as a sink under drier conditions and as a source under wetter conditions. Unexpectedly, our study areas were generally sinks for N 2 O and N 2 O fluxes were partly explained by total phosphorus and available nitrogen concentrations. This initial work describing the spatial variation of soil fluxes of the three main GHGs measured simultaneously in forests of the Guiana Shield lays the foundation for specific studies of the processes underlying the observed patterns.

54 ENVIRONMENTAL SCIENCES↗

Spatially resolved estimation of ozone-related mortality in the United States under two representative concentration pathways (RCPs) and their uncertainty

We report that the spatial pattern of the uncertainty in air pollution-related health impacts due to climate change has rarely been studied due to the lack of high-resolution model simulations, especially under the Representative Concentration Pathways (RCPs), the latest greenhouse gas emission pathways. We estimated future tropospheric ozone (O 3 ) and related excess mortality and evaluated the associated uncertainties in the continental United States under RCPs. Based on dynamically downscaled climate model simulations, we calculated changes in O 3 level at 12 km resolution between the future (2057 and 2059) and base years (2001–2004) under a low-to-medium emission scenario (RCP4.5) and a fossil fuel intensive emission scenario (RCP8.5). We then estimated the excess mortality attributable to changes in O 3 . Finally, we analyzed the sensitivity of the excess mortality estimates to the input variables and the uncertainty in the excess mortality estimation using Monte Carlo simulations. O 3 -related premature deaths in the continental U.S. were estimated to be 1312 deaths/year under RCP8.5 (95 % confidence interval (CI): 427 to 2198) and ₋2118 deaths/year under RCP4.5 (95 % CI: ₋3021 to ₋1216), when allowing for climate change and emissions reduction. The uncertainty of O 3 -related excess mortality estimates was mainly caused by RCP emissions pathways. Finally, excess mortality estimates attributable to the combined effect of climate and emission changes on O 3 as well as the associated uncertainties vary substantially in space and so do the most influential input variables. Spatially resolved data is crucial to develop effective community level mitigation and adaptation policy.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Technological and optical methods for increasing the spatial resolution of thermochemical laser writing on thin metal films

Various techniques, effects, and factors are examined that enable one to increase the spatial resolution of thermochemical direct laser writing on thin metal films. A few specific conditions of experimental laser processing with the focused beam of a CW green laser are investigated therewith. One of the goals of this work was to find a suitable metal and its thickness that would make it possible to implement the through-oxidation regime. When properly adjusting a value of laser exposure, this regime was found to be very useful for increasing the spatial resolution of the laser writing. This is due to bleaching of an oxidized film near the peak of a focused laser spot. Apart from the experimental results concerning the technology of laser processing of the metal films, in this work, there are also considered some ways of reducing a focused spot size used for the direct laser writing.

36 MATERIALS SCIENCE↗

A parallel evolutionary multiple-try metropolis Markov chain Monte Carlo algorithm for sampling spatial partitions

We develop an Evolutionary Markov Chain Monte Carlo (EMCMC) algorithm for sampling spatial partitions that lie within a large, complex, and constrained spatial state space. Our algorithm combines the advantages of evolutionary algorithms (EAs) as optimization heuristics for state space traversal and the theoretical convergence properties of Markov Chain Monte Carlo algorithms for sampling from unknown distributions. Local optimality information that is identified via a directed search by our optimization heuristic is used to adaptively update a Markov chain in a promising direction within the framework of a Multiple-Try Metropolis Markov Chain model that incorporates a generalized Metropolis-Hastings ratio. We further expand the reach of our EMCMC algorithm by harnessing the computational power afforded by massively parallel computing architecture through the integration of a parallel EA framework that guides Markov chains running in parallel.

97 MATHEMATICS AND COMPUTING↗

Markovian transport processes in a heterogeneous, variably saturated watershed: A multi-domain spatial Markov model

Transport processes in watersheds remain challenging to describe accurately with upscaled models because of their intricate complexities at multiple scales that can lead to multi-modal, non-Fickian breakthrough curves. One of the recent advances in solute transport modeling has been the Lagrangian spatial Markov model (SMM), which describes transport using velocity increments and models the correlated transitions between them. The method has been applied previously to saturated porous media and fractured media, but these successful applications suggest it may be useful for describing watershed scale processes as well. An existing, 3-D, heterogeneous variably saturated model of a headwaters catchment and classical random walk particle tracking were used to generate a forward simulation and the resulting transport was analyzed with a spatial Markov framework. Existing SMM methods were used to analyze the transport paths through the complex, unconfined domain and we found that the vadose zone plays an important role in the correlation structure. As such, a new kind of SMM is proposed, termed a multi-domain SMM (MD-SMM), that uses separate correlation models for auto-transitions in the vadose zone and the saturated zone, and for the cross-transitions between them. The MD-SMM improves representation of transport relative to the single domain model and can naturally delineate times when a particle is in the vadose zone or the saturated zone, adding an additional degree of realism to the upscaled model. Lastly, we show that the transition probability matrix for transport in the saturated portion of this unconfined system is approximately Markovian, which is an important validation of the proposed framework.

54 ENVIRONMENTAL SCIENCES↗

A staged deep learning approach to spatial refinement in 3D temporal atmospheric transport

High-resolution spatiotemporal simulations effectively capture the complexities of atmospheric plume dispersion in complex terrain. However, their high computational cost makes them impractical for applications requiring rapid responses or iterative processes, such as optimization, uncertainty quantification, or inverse modeling. To address this challenge, this work introduces the Dual-Stage Temporal Three-dimensional UNet Super-resolution (DST3D-UNet-SR) model, a highly efficient deep learning model for plume dispersion predictions. DST3D-UNet-SR is composed of two sequential modules: the temporal module (TM), which predicts the transient evolution of a plume in complex terrain from low-resolution temporal data, and the spatial refinement module (SRM), which subsequently enhances the spatial resolution of the TM predictions. We train DST3D-UNet-SR using a comprehensive dataset derived from high-resolution large eddy simulations (LES) of plume transport. We propose the DST3D-UNet-SR model to significantly accelerate LES of three-dimensional (3D) plume dispersion by three orders of magnitude. Additionally, the model demonstrates the ability to dynamically adapt to evolving conditions through the incorporation of new observational data, substantially improving prediction accuracy in high-concentration regions near the source.

3D temporal sequences↗

Spatial decomposition of structured grids for nuclear reactor simulations

Spatial decomposition methods based on graph partitioning are developed and implemented in the high fidelity neutron transport code MPACT. These graph-based spatial decomposition methods are more general than previous decomposition methods and typically provide better load balance and reduced runtimes due to their improved parallel efficiency. Correlations are drawn between simulation runtime and the balance of the partition for 2D simulations. Comparisons are made using partition balance metrics for different decomposition schemes in 2D and 3D simulations. Finally, for typical ranges of subdomains, graph-based partitioning methods offer significant reductions to runtimes. However, for highly decomposed problems, these graph-based methods may decrease convergence rates, thus reducing parallel efficiency compared to older methods.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

UrbanPop: A spatial microsimulation framework for exploring demographic influences on human dynamics

Ensuring the social equity of planning measures in social systems requires an understanding of human dynamics, particularly how individual relationships, activities, and interactions intersect with individual needs. Spatial microsimulation models (SMSMs) support planning for human security goals by representing human dynamics through realistic, georeferenced synthetic populations, that a) provide a complete representation of social systems while b) also protecting individual privacy. In this paper, we present UrbanPop, an open and reproducible SMSM framework for analysis of human dynamics with high spatial, temporal, and demographic resolution. UrbanPop creates synthetic populations of demographically detailed worker and student agents, positioning them first at probable nighttime locations (home), then moving them to probable daytime locations (work/school). Summary aggregations of these populations match the granular detail available at the census block group level in the American Community Survey Summary File (SF), providing realistic approximations of the actual population. UrbanPop users can select particular demographic traits important in their application, resulting in a highly tailored agent population. We first lay out UrbanPop's baseline methodology, including population synthesis, activity modeling, and diagnostics, then demonstrate these capabilities by developing case studies of shifting population distributions and high-risk populations in Knox County, TN during the global COVID-19 pandemic.

60 APPLIED LIFE SCIENCES↗

Biotic predictors improve species distribution models for invasive plants in Western U.S. Forests at high but not low spatial resolutions

Invasions by non-native plants threaten forest health and sustainability. The ability to predict areas at greatest risk to invasion is essential for informing both monitoring and management of invasive species. Species distribution models (SDMs) are often used to identify environmental correlates of a species’ occurrence and predict geographic areas that may be suitable for its presence and are commonly constructed using solely abiotic predictors. However, mounting evidence implies that not including biotic predictors in SDMs may yield less accurate models at some resolutions typical of landscape-scale models, although this possibility has rarely been evaluated in invasive plants. In this study, we determined whether including descriptors of the biotic environment improved the accuracy of SDMs built at five decreasing spatial resolutions for infestations of five common invasive plants in forests of California, Oregon, and Washington, USA and described environmental correlates of each species’ presence. Predictors of occurrence often echoed those identified in previous studies of the focal species, indicating that our models accurately identified important environmental drivers of occurrence. Including biotic predictors in the SDMs consistently improved model accuracy only at the highest resolution we examined, which may be due to the spatial scale at which biotic interactions primarily act to constrain species’ distributions, the particular biotic predictors we used in our models, or correlations between attributes of the abiotic and biotic environment. This finding suggests that, while the practice of building SDMs using abiotic predictors alone may generally yield models whose accuracy does not differ substantially from those that also include biotic predictors, the effects of biotic interactions on the distribution of invasive plants in forests may be detectable at larger scales than previously thought.

59 BASIC BIOLOGICAL SCIENCES↗

Spatial distribution of soil carbon stocks in a semi-arid region of India

We predicted total carbon (TC) stocks in the 0–30 cm soil depth of two southern states in India using field observations, environmental covariates and geospatial approaches. We compared the Geographically Weighted Regression Kriging (GWRK) with Linear Regression Kriging (LRK) approach to predict the TC stocks. Greater spatial heterogeneity in TC stocks (2–15 kg m –2 ) were predicted with lower estimation errors (RMSE = 2 kg m –2 R 2 = 0.63) in GWRK in comparison to the LRK approach (RMSE = 3 kg m –2 , R 2 = 0.55). The average decrease in the prediction error was 39% in GWRK in comparison to the LRK approach. The total TC stock in the 0–30 cm depth of the study area was estimated at 1.5 Pg C with upper and lower prediction intervals of 1 and 2 Pg C, respectively. The cropland stored largest (65%, 1 Pg C) amount of TC stocks followed by forest (21%, 0.31 Pg C) and plantation (8%, 0.12 Pg C) land cover types. Among soil types the Alfisols stored largest (33%, 0.49 Pg C) amount of TC stocks followed by Inceptisols (23%; 0.35 Pg C) and Entisols (18%, 0.27 Pg C). The uncertainty in TC stock predictions ranged from 41 to 75% and 69 to 91% under various land covers and soil types, respectively. Highest uncertainties in predicted TC stocks were associated with the forest land cover type and Mollisols soil order. Similarly, lowest uncertainties were found in the built up areas and Aridisols soil order. Our results suggest that GWRK is a useful approach to spatially predict the TC stocks at regional scales.

58 GEOSCIENCES↗

Spatial profiling of stapled α–helical peptide ATSP-7041 in mouse whole-body thin tissue sections using droplet-based liquid microjunction surface sampling-HPLC-ESI–MS/MS

Here, the application of a fully automated autosampler/HPLC-ESI–MS/MS system for spatially resolved quantitative droplet-based liquid extraction surface sampling/profiling of stapled α–helical peptide ATSP-7041 in mouse whole-body thin tissue sections is reported. 20-μm-thick serial tissue sections of an ATSP-7041 dosed mouse were prepared and the absolute concentration of the targeted peptide was first determined in different organs using 2.3-mm diameter tissue punches, standard bulk tissue extraction protocols, and subsequent HPLC separation and tandem mass spectrometric analysis. The same organs/locations were then analyzed in neighboring tissue sections using the droplet-based surface sampling approach. The observed ATSP-7041 concentration using this method was always significantly lower than that measured by the tissue punch workflow at the same tissue location of a serial section. Calculated extraction efficiencies were 10.7 ± 0.5% (brain), 11.0 ± 3.2% (liver spot 1), 10.7 ± 2.6% (liver spot 2), 15.0 ± 0.6% (lung) and 12.9 ± 0.7% (blood). While these extraction efficiency values were low, they were reproducible within a given organ. This suggests that once the extraction efficiency is established for a given tissue type and drug, the reproducibility of the droplet-based approach could provide a non-labor intensive and high-throughput means to acquire spatially resolved quantitative analysis of multiple samples of the same type.

60 APPLIED LIFE SCIENCES↗

Lithiophilic CoF 2 @C hollow spheres towards spatial lithium deposition for stable lithium metal batteries

Lithium metal (LM) is a promising anode for next-generation batteries due to its high theoretical capacity and low electrode potential. Nonetheless, side reactions, volume change, and unwanted lithium dendrite growth seriously limit the practical application of LM. Herein, with the aid of a hard template approach, a novel lithiophilic CoF 2 -carbon hollow sphere (CoF 2 @C-HS) composite material is successfully prepared via a facile in-situ fluorination and etching strategy. The lithiophilic CoF 2 acts as nucleation sites to reduce nucleation overpotential as well as induces the spatial Li deposition and the formation of LiF-rich solid electrolyte interphase (SEI), and the hollow carbon matrix can enhance the electrical conductivity and offer free space for LM deposition. Theoretical simulations reveal that the synergistic effect of lithiophilic CoF 2 and hollow carbon matrix homogenizes the electric field distribution and Li + flux. Benefiting from these advantages, the CoF 2 @C-HS-modified copper substrate electrode delivers an enhanced Coulombic efficiency (CE) of 93.7% for 280 cycles at 1 mA cm –2 and 1 mA h cm –2 . The symmetrical cell using CoF 2 @C-HS can stably cycle more than 1800 h with a low voltage hysteresis of 11 mV at a current density of 0.5 mA cm –2 and an areal capacity of 0.5 mA h cm –2 . Moreover, the Li@CoF 2 @C-HS composite anode enables more than 300 stable cycles at 1 C with a capacity retention of 95% in LiFePO 4 -based full cell and 110 stable cycles at 1 C in LiNi 0.8 Co 0.1 Mn 0.1 O 2 (NCM811)-based high-voltage full cell. Finally, this work might shed a new light on designing lithiophilic hosts to spatially confine LM deposition, realizing dendrite-free LM anodes and the practical applications of LM batteries.

25 ENERGY STORAGE↗

Spatial and temporal prediction of radiation dose rates near Fukushima Daiichi Nuclear Power Plant

In this paper, we have developed a methodology to estimate the spatiotemporal distribution of radiation air dose rates around the Fukushima Daiichi Nuclear Power Plant (FDNPP). In our exploratory data analysis, we found that (1) the temporal evolution of dose rates is composed of a log-linear decay trend and fluctuations of air dose rates that are spatially correlated among adjacent monitoring posts; and (2) the slope of the log-linear environmental decay trend can be represented as a function of the apparent initial dose rates, coordinate position, land-use type, and soil type. From these observations, we first estimated the log-linear decay trend at each location based on these predictors, using the random forest method. We then developed a modified Kalman filter coupled with a Gaussian process model to estimate the dose-rate time series at a given location and time. We applied this method to the Fukushima evacuation zone (as of March 2017), which included 17 monitoring post locations (with monitoring datasets collected between 2014 and 2018) and generated a time series of dose-rate maps. Our results show that this approach allows us to produce accurate spatial and temporal predictions of radiation dose-rate maps using limited spatiotemporal measurements.

61 RADIATION PROTECTION AND DOSIMETRY↗

Improvement in the spatial resolution for imaging with fast neutrons

In this paper, we report on the realization of an improved concept for the detection of fast neutrons using a specific setup of scintillators with the aim to overcome limitations in spatial resolution. While fast neutron imaging (FNI) is a technique to investigate very thick material layers in transmission mode, currently there is a limit in the spatial resolution at ~1 mm, which hinders the performance for the detection of features like cracks, material damage or pores in large objects ($\gg$1 cm 3 ). The improved concept presented here is based on the separation of the converter material from the scintillation layer in a suitable way, which was successfully tested and referenced to the standard devices at the NECTAR facility (FRM-2, MLZ, Garching) under realistic beamline conditions. The results imply a break-through in enabling detection of structures on the order of 0.2 to 0.5 mm (a more precise estimation is not possible due to other resolution determing factors in a realistic setup). Potential additional improvements are discussed.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Challenges in spatial metabolomics and proteomics for functional tissue unit and single-cell resolution

While transcriptomics is the most broadly applied technology for global spatial and single cell measurements in healthy and diseased tissues. Transcripts are often used as a proxy for protein and even metabolite measurements, but it has become commonly accepted that extrapolating this kind of information is a poor proxy and not a substitute for direct measurement. Within the last decade advanced developments of mass spectrometry-based assays have made these direct measurements not only possible, but routine. Where mass spectrometry has become an enabling technology, and various methods can now detect hundreds of metabolites and thousands of proteins from samples. Not only can this be performed within bulk measurements, but much effort has been directed into translating these measurements to single cells and tissues at cellular resolution. The information obtained from mass spectrometry is now able to trace metabolic events and decipher feedback loops across anatomical regions, connecting genetic and metabolic networks that define phenotypes. Herein, we will broadly overview developments in the field over the past decade, leading into several case studies which highlight the direct measurement of metabolites, proteins, and proteoforms from thinly sliced tissues. Much of this work is feasible due to multidisciplinary team science, and we offer brief perspective on paths forward and the challenges that persist with adoption and application of spatial omics.

59 BASIC BIOLOGICAL SCIENCES↗

Spatial access and resource limitations control carbon mineralization in soils

Core-scale soil carbon fluxes are ultimately regulated by pore-scale dynamics of substrate availability and microbial access. These are constrained by physicochemical and biochemical phenomena (e.g. spatial access and hydrologic connectivity, physical occlusion, adsorption-desorption with mineral surfaces, nutrient and resource limitations). We conducted an experiment to determine how spatial access and resource limitations influence core-scale SOM mineralization, and how these are regulated by antecedent moisture conditions. Intact soil cores were incubated at field-moist vs. drought conditions, after which they were saturated from above (to simulate precipitation) or below (to simulate groundwater recharge). Soluble C (acetate) and N (nitrate) forms were added to some cores during the rewetting process to alleviate potential nutrient limitations. Respiration showed evidence of C-limitation, as C amendments increased the cumulative CO 2 evolved. Drought and rewetting increased soil respiration, and these soils also exhibited increased complex aromatic molecules in porewater. This newly available substrate appeared to alleviate nutrient limitations on respiration, because there were no further respiration increases with subsequent C and N amendments. We expected that respiration would be influenced by wetting direction, as simulated precipitation would mobilize C from the surface. However, as a main effect, this response was seen only in the C-amended soils, indicating that surface-C may not have been bioavailable. At the pore scale (porewater samples), compared to the baseline soils, drought and the C, N amendments caused a net loss of identified molecules when the soils were rewet from below, whereas wetting from above caused a net increase in identified molecules. This indicates that as soils were wet from below, the fresh inputs simulated the C-and N-limited microbial populations present deeper in the soil profile. Furthermore, our experiment highlights the complex and interactive role of antecedent moisture conditions, wetting direction, and resource limitations in driving core-scale C fluxes.

59 BASIC BIOLOGICAL SCIENCES↗

Surface albedo spatial variability in North America: Gridded data vs. local measurements

Considering the current booming interest for the large-scale deployment of bifacial photovoltaic modules, the solar industry now requires accurate estimates of broadband surface albedo at high spatial resolution. In this context, the present study evaluates the adequacy and performance over North America of two Moderate Resolution Imaging Spectroradiometer (MODIS) white-sky albedo products (at 500-m and 1-km resolution) and the National Solar Radiation Database (NSRDB) product at 4-km resolution. Two variations of the 500-m MODIS product are also considered: black-sky albedo and all-sky albedo. Albedo observations from 36 radiometric stations during 2011–2015 are analyzed while considering the apparent homogeneity of the surface characteristics over the 4x4 km NSRDB pixel in which they are located. Even at sites where the albedo around the station has been found “homogeneous” in the literature, marked differences are found between the daily observations and the gridded estimates at any spatial resolution. Furthermore, differences in seasonal behavior and between the three different albedo types also impact the accuracy of the albedo estimates, with overtones caused by local specificities and inhomogeneities. All this precludes the desirable evaluation of the local albedo at a specific site of relatively small size compared to its corresponding 4x4-km pixel if only the mean albedo over that pixel is known. Significant discrepancies are also found at snow-impacted sites, most importantly in the case of the NSRDB albedo estimates, which are typically much too high.

14 SOLAR ENERGY↗

Unraveling plant–microbe symbioses using single-cell and spatial transcriptomics

Plant-microbe symbioses require intense interaction and genetic coordination to successfully establish in specific cell types of the host and symbiont. Traditional RNA-seq methodologies lack the cellular resolution to fully capture these complexities, but single-cell and spatial transcriptomics (ST) are now allowing scientists to probe symbiotic interactions at an unprecedented level of detail. Here, we discuss the advantages that novel spatial and single-cell transcriptomic technologies provide in studying plant-microbe endosymbioses and highlight key recent studies. Finally, we consider the remaining limitations of applying these approaches to symbiosis research, which are mainly related to the simultaneous capture of both plant and microbial transcripts within the same cells.

59 BASIC BIOLOGICAL SCIENCES↗