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At least 1,153 records · Page 64

Metabolic patterns in Septoria canker resistant and susceptible Populus trichocarpa genotypes 24 hours post-inoculation

Sphaerulina musiva is an economically and ecologically important fungal pathogen that causes Septoria stem canker and leaf spot disease of Populus species. Here, to bridge the gap between genetic markers and structural barriers previously found to be linked to Septoria (Sphaerulina musiva) canker disease resistance in poplar, we employed hydrophilic interaction liquid chromatography (HILIC) and tandem mass spectrometry (MS/MS) to identify and quantify metabolites involved with signaling and cell wall re-modelling. Fluctuations in signaling molecules, organic acids, amino acids, sterols, phenolics, and saccharides in resistant and susceptible Populus trichocarpa inoculated with Sphaerulina musiva, were observed. The patterns of 222 metabolites in the resistant host implicates systemic acquired resistance (SAR), cell wall apposition, and lignin deposition as modes of resistance to this hemibiotrophic pathogen. This pattern is consistent with the expected response to the biotrophic phase of S. musiva colonization during the first 24 hours post-inoculation. The fungal pathogen metabolized key regulatory signals of SAR, other phenolics, and precursors of lignin biosynthesis which were depleted in the susceptible host. This is the first study to characterize metabolites associated with the response to initial colonization by S. musiva between resistant and susceptible hosts.

59 BASIC BIOLOGICAL SCIENCES↗

Large-scale Genetic Characterization of a Model Sulfate-Reducing Bacterium

ABSTRACTSulfate-reducing bacteria (SRB) are obligate anaerobes that can couple their growth to the reduction of sulfate. Despite the importance of SRB to global nutrient cycles and their damage to the petroleum industry, our molecular understanding of their physiology remains limited. To systematically provide new insights into SRB biology, we generated a randomly barcoded transposon mutant library in the model SRB Desulfovibrio vulgaris Hildenborough (DvH) and used this genome-wide resource to assay the importance of its genes under a range of metabolic and stress conditions. In addition to defining the essential gene set of DvH, we identified a conditional phenotype for 1,137 non-essential genes. Through examination of these conditional phenotypes, we were able to make a number of novel insights into our molecular understanding of DvH, including how this bacterium synthesizes vitamins. For example, we identified DVU0867 as an atypical L-aspartate decarboxylase required for the synthesis of pantothenic acid, provided the first experimental evidence that biotin synthesis in DvH occurs via a specialized acyl carrier protein and without methyl esters, and demonstrated that the uncharacterized dehydrogenase DVU0826:DVU0827 is necessary for the synthesis of pyridoxal phosphate. In addition, we used the mutant fitness data to identify genes involved in the assimilation of diverse nitrogen sources, and gained insights into the mechanism of inhibition of chlorate and molybdate. Our large-scale fitness dataset and RB-TnSeq mutant library are community-wide resources that can be used to generate further testable hypotheses into the gene functions of this environmentally and industrially important group of bacteria.

Trotter, Valentine V↗

Superfluid density and Berezinskii-Kosterlitz-Thouless transition of a spin-orbit-coupled Fulde-Ferrell superfluid

We theoretically investigate the superfluid density and Berezinskii-Kosterlitz-Thouless (BKT) transition of a two-dimensional Rashba spin-orbit-coupled atomic Fermi gas with both in-plane and out-of-plane Zeeman fields. It was recently predicted that, by tuning the two Zeeman fields, the system may exhibit different exotic Fulde-Ferrell (FF) superfluid phases, including the gapped FF, gapless FF, gapless topological FF, and gapped topological FF states. Due to the FF paring, we show that the superfluid density (tensor) of the system becomes anisotropic. When an in-plane Zeeman field is applied along the x direction, the tensor component along the y direction n s ,yy is generally larger than n s ,xx in most parameter space. At zero temperature, there is always a discontinuity jump in n s ,xx as the system evolves from a gapped FF into a gapless FF state. With increasing temperature, such a jump is gradually washed out. The critical BKT temperature has been calculated as functions of the spin-orbit-coupling strength, interatomic interaction strength, and in-plane and out-of-plane Zeeman fields. We predict that the novel FF superfluid phases have a significant critical BKT temperature, typically at the order of 0.1T F , where T F is the Fermi degenerate temperature. Furthermore, their observation is within the reach of current experimental techniques in cold-atom laboratories.

74 ATOMIC AND MOLECULAR PHYSICS↗

Hybrid-Functional Calculations of the Copper Impurity in Silicon

We calculate formation energies and transition levels for copper-related defects in silicon using the screened hybrid functional of Heyd, Scuseria, and Ernzerhof HSE06. We consider Cu siting on interstitial sites ( Cu i ), a substitutional site ( Cu Si ), a Cu Si - Cu i pair, a complex formed from substitutional Cu and interstitial hydrogen ( Cu Si - H i ), and a complex formed from a substitutional Cu and three interstitial Cu atoms ( Cu Si - 3 Cu i ). We find that Cu i is a fast diffuser, with a migration barrier of only 0.19 eV, in good agreement with experimental values. Cu i is a shallow donor and its formation energy is lower than that of Cu Si for all Fermi-level positions in the band gap. Cu Si , on the other hand, induces levels in the gap which are related to the occupation of antibonding states originating from the coupling between the Cu 3 d states ( t 2 ( d ) ), resonant in the valence band, and the vacancy-induced gap states ( t 2 ( p ) ). The stable charge states of Cu Si in the gap are + 1 , 0, - 1 , and - 2 . The transition levels of Cu Si - Cu i and Cu Si - H i are closely related to the levels of isolated Cu Si : a donor level ( + / 0 ) near the valence band, an acceptor level near midgap, and a double-acceptor level in the upper part of the gap. Overall, the calculated transition levels are in good agreement with experimental results, and the formation energies explain the observed solubility.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Crystal growth and quantum oscillations in the topological chiral semimetal CoSi

Here, we survey the electrical transport properties of single-crystalline, topological chiral semimetal CoSi grown via different methods. High-quality CoSi single crystals were found in the growth from a tellurium solution. The sample's high carrier mobility enables us to observe quantum oscillations (QOs) in its thermoelectrical signals. Our analysis of QOs reveals two spherical Fermi surfaces around the R point in its Brillouin zone corner. The extracted Berry phases of these electron orbits are consistent with the -2 chiral charge as reported in density functional theory (DFT) calculations. A detailed analysis of the QOs reveals that the spin-orbit-coupling-induced band splitting is less than 2 meV near the Fermi level, one order of magnitude smaller than our DFT calculation. We also report a large phonon-drag-induced Nernst effect in CoSi at intermediate temperatures.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Spin-orbit coupling induced robust spin-Seebeck effect and pure thermal spin currents in achiral molecule systems

Spin-Seebeck effect (SSE) is an effective route to realize pure spin current by using spin-polarized electrons or spin-wave transport in magnetic systems. In this work we propose a route, i.e., by using spin-orbit coupling (SOC), to achieve robust SSE characterized by pure thermal spin current. The material examples are constructed on achiral nanotubes, and the theoretical results reveal that (i) as temperature gradient is applied along the nanotubes, thermal spin-up and spin-down currents with opposite flow directions are produced without any accompanying charge current, (ii) the SSE is robust against decoherence and nonuniform interchain SOC, (iii) the thermal spin currents display a multioscillation feature with increasing device temperatures, supporting their potential device applications in thermal spin-current multiswitcher, and (vi) strain engineering in the radical direction of nanotubes is an effective way to improve SSE and to control pure thermal spin current. These inspiring spin transport behaviors in achiral molecular systems put forward a mechanism to realize the robust SSE characterized by pure spin current and develop the research field of spin-orbito-caloritronics, which focuses on the interplay of electrons’ spin and orbital degrees of freedom in the presence of temperature gradient.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Evidence from transport measurements for YRh 6 Ge 4 being a triply degenerate nodal semimetal

We have investigated magnetotransport properties of YRh 6 Ge 4 , which was recently predicted to be a triply degenerate nodal semimetal. We find it exhibits remarkable signatures of a chiral anomaly, manifested by large negative longitudinal magnetoresistance, the quadratic field dependence of magnetoconductance and the planar Hall effect. Furthermore, we have also observed Shubnikov-de Haas (SdH) quantum oscillations in the magnetoresistivity measurements on this material. The analyses of the SdH data reveal two pointlike Fermi surfaces and these pockets are found to host nearly massless fermions. The small size of these Fermi pockets is in a good agreement with the theoretical prediction that the triply degenerate point in YRh 6 Ge 4 is much closer to the Fermi level than previously demonstrated triply degenerate nodal semimetals such as MoP and WC. These results suggest YRh 6 Ge 4 may serve as a model system to probe exotic properties of three-component fermions and understand their underlying physics.

36 MATERIALS SCIENCE↗

Canted Eu magnetic structure in EuMnSb 2

Magnetic ordering breaks the time-reversal symmetry, greatly impacting material topological properties. Here, we report the investigation of the magnetic properties of the layered EuMnSb 2 , which has two sets of magnetic sublattices. Both the magnetization and electrical resistivity reveal two phase transitions with one at T N,Eu ~21K and the other at T N,Mn ~346K. Single crystal neutron diffraction refinement indicates that both transitions are originated from magnetic ordering. Below T N,Mn , the Mn sublattice forms the C-type antiferromagnetic (AFM) structure with moments [(4.5±0.6)μB at 7 K] pointing along the a axis. Below T N,Eu , the Eu sublattice forms the canted A-type AFM structure with moments [(5.9±0.8)μB at 7 K] lying in the ac plane but pointing (41 ± 1)° away from the a axis. Quantitative analysis indicates that the spin-spin correlation length, while anisotropic, has long-range characteristic in all directions for both the Eu and Mn sublattices.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Electrical detection of magnon-photon interactions via an auxiliary spin-wave mode

We report on the electrical detection of a hybrid magnon-photon system which comprises a magnetic sample coupled to a planar cavity. While the uniform Kittel mode has the largest coupling strength among all the magnon modes, it generates only a modest voltage signal by means of the inverse spin-Hall effect. We have found that the generated voltage can be significantly enhanced by introducing a higher-order magnon mode, which possesses a much higher spin pumping efficiency, and furthermore, it is nearly degenerated with the Kittel mode. In this work, the experimental results can be explained by our theoretical model and suggest that the use of an auxiliary magnon mode can realize the configuration of a magnon-photon system with both strong coupling and large spin current.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Topological Hall effect and magnetic states in the Nowotny chimney ladder compound Cr 11 Ge 19

In this report, we have investigated the magnetic and charge transport properties of single crystals of the Nowotny chimney ladder compound Cr 11 Ge 19 and mapped out a comprehensive phase diagram reflecting the complicated interplay between the Dzyaloshinskii-Moriya (DM) interaction, the dipolar interaction, and the magnetic anisotropy. We have identified a set of interesting magnetic phases and attributed a finite topological Hall effect to the recently discovered biskyrmion phase. These data also suggest the existence of an antiskyrmion state at finite fields for temperatures just below the magnetic ordering temperature T c as indicated by a distinct change in sign of the topological Hall effect. Above T c , we discovered a region of enhanced magnetic response corresponding to a disordered phase likely existing near the ferromagnetic critical point under small magnetic fields. Strong spin chirality fluctuations are demonstrated by the large value of the topological Hall resistivity persisting up to 1 T, which is most likely due to the existence of the DM interaction. We argue that changes to the topological Hall effect correspond to different topological spin textures that are controlled by magnetic dipolar and DM interactions that vary in importance with temperature

36 MATERIALS SCIENCE↗

Beyond magnons in Nd 2 ScNbO 7 : An Ising pyrochlore antiferromagnet with all-in–all-out order and random fields

We report the low-temperature magnetic properties of Nd 3+ pyrochlore Nd 2 ScNbO 7 . Susceptibility and magnetization show an easy-axis moment, and heat capacity reveals a phase transition to long-range order at T N =371(2) mK with a fully recovered ΔS=Rln(2), 53% of it recovered for T>T N . Elastic neutron scattering shows a long-range all-in all-out magnetic order with low-Q diffuse elastic scattering. Inelastic neutron scattering shows a low-energy flat band, indicating a magnetic Hamiltonian similar to Nd 2 Zr 2 O 7 . Nuclear hyperfine excitations measured by ultra-high-resolution neutron backscattering indicate a distribution of static electronic moments below T N , which may be due to B-site disorder influencing Nd crystal electric fields. Analysis of heat-capacity data shows an unexpected T-linear or T 3/2 term which is inconsistent with conventional magnon quasiparticles, but is consistent with fractionalized spinons or gapless local spin excitations. We use legacy data to show similar behavior in Nd 2 Zr 2 O 7 . Comparing local static moments also reveals a suppression of the nuclear Schottky anomaly in temperature, evidencing a fraction of Nd sites with nearly zero static moment, consistent with exchange-disorder-induced random singlet formation. Finally, taken together, these measurements suggest an unusual fluctuating magnetic ground state which mimics a spin liquid, but may not actually be one.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Structural and magnetic characterization of CeTa 7 ⁢O 19 and YbTa 7 ⁢ O 19 with a two-dimensional pseudospin-$\frac{1}{2}$ triangular lattice

Triangular lattice antiferromagnets are prototypes for frustrated magnetism and may potentially realize novel quantum magnetic states such as a quantum spin-liquid ground state. A recent work suggests NdTa 7 ⁢O 19 with rare-earth triangular lattice is a quantum spin-liquid candidate and highlights the large family of rare-earth heptatantalates as a framework for quantum magnetism investigation. Here, in this paper, we report the structural and magnetic characterization of CeTa 7 ⁢ O 19 and YbTa 7 ⁢ O 19 . Both compounds are isostructural to NdTa 7 ⁢O 19 with no detectable structural disorder. For CeTa 7 ⁢O 19 , the crystal field energy levels and parameters are determined by inelastic neutron scattering measurements. Based on the crystal field result, the magnetic susceptibility data could be well fitted and explained, which reveals that CeTa 7 ⁢O 19 is a highly anisotropic Ising triangular-lattice antiferromagnet (𝑔 𝑧 ⁡/𝑔 𝑥⁢𝑦 ∼ 3) with very weak exchange interaction (J ∼ 0.22 K). For YbTa 7⁢ O 19 , millimeter-sized single crystals could be grown. The anisotropic magnetization and electron spin resonance data show that YbTa 7⁢ O 19 has a contrasting in-plane magnetic anisotropy with 𝑔 𝑧 ⁡/𝑔 𝑥⁢𝑦 ∼ 0.67 similar as that of YbMgGaO 4 . The above results indicate that CeTa7⁢ O 19 and YbTa 7 ⁢O 19 with pseudospin-1/2 ground states might either be quantum spin-liquid candidate materials or find applications in adiabatic demagnetization refrigeration due to the weak exchange interaction.

Pan, Feihao↗

Structural and magnetic properties of CoTeMo⁢O 6

Here, we have conducted a comprehensive investigation into the magnetic properties of the chiral multiferroic material CoTeMo⁢O 6 . In contrast with the previous claim of canted antiferromagnetic order with ferromagnetic components [Y. Doi et al., J. Solid State Chem. 182, 3232 (2009)], our investigation reveals an antiferromagnetic ground state with compensated moments, providing an interesting platform for exploring exotic material properties. Through careful measurements of magnetization under a series of applied fields, we demonstrate that there exist two sequential field-induced magnetic transitions in CoTeMo⁢O 6 , with one occurring at 𝐻 𝑐⁢1 =460 Oe along the 𝑎 axis, and the other at 𝐻 𝑐⁢2 =1.16 T with the field along the 𝑏 axis. The values of 𝐻 𝑐⁢1 and 𝐻 𝑐⁢2 exhibit strong angular dependence and diverge with different rates as the applied field is rotated 90 ° within the 𝑎⁢𝑏 plane. This reflects the distinct nature of these transitions, which is further supported by the different critical behavior of 𝐻 𝑐⁢1 and 𝐻 𝑐⁢2 , characterized by the values of 𝛾, in the function of 𝐻 𝑐 =𝐻 0 ⁡(1−𝑇/𝑇 𝑐 ) 𝛾 . Furthermore, we have demonstrated that there exist structural and magnetic twin domains in CoTeMo⁢O 6 that strongly affect the experimental measurement of their macroscopic properties. Intriguingly, these twin domains can be related to the orthorhombicity/chirality of the crystal structure with the space group 𝑃⁢2 1 ⁢2 1⁢ 2. We further explored the magnetic and structural domains with uniaxial pressure and polarized light microscopy. Our results suggest that CoTeMo⁢O 6 could be used as a unique platform for investigating the intriguing physics involving intertwined degrees of freedom. The tunability of the underlying domain distribution and its strong anisotropy could also be useful for developing functional devices and applications.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Magnetic order induces symmetry breaking in the single-crystalline orthorhombic CuMnAs semimetal

Recently, orthorhombic CuMnAs has been proposed to be a magnetic material where topological fermions exist around the Fermi level. Here we report the magnetic structure of the orthorhombic Cu 0.95 MnAs and Cu 0.98 Mn 0.96 As single crystals. While Cu 0.95 MnAs is a commensurate antiferromagnet below 360 K with a propagation vector of k = 0,Cu 0.98 Mn 0.96 As undergoes a second-order paramagnetic to incommensurate antiferromagnetic phase transition at 320 K with k = (0.1,0,0), followed by a second-order incommensurate to commensurate antiferromagnetic phase transition at 230 K. In the commensurate antiferromagnetic state, the Mn spins order parallel to the crystallographic b axis but antiparallel to their nearest neighbors, with the spin orientation along the b axis. This magnetic order breaks S 2z , the two-fold rotational symmetry around the c axis, resulting in finite band gaps at the crossing point and the disappearance of the massless topological fermions. Furthermore, our first-principles calculations suggest that orthorhombic CuMnAs can still host spin-polarized surface states and signature induced by nontrivial topology, which makes it a promising candidate for antiferromagnetic spintronics.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗