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At least 1,153 records · Page 64

Coiled-coil coactivators play a structural role mediating interactions in hypoxia-inducible factor heterodimerization

The hypoxia-inducible factor complex (HIF-α·aryl hydrocarbon receptor nuclear translocator (ARNT)) requires association with several transcription coactivators for a successful cellular response to hypoxic stress. In addition to the conventional global transcription coactivator CREB-binding protein/p300 (CBP/p300) that binds to the HIF-α transactivation domain, a new group of transcription coactivators called the coiled-coil coactivators (CCCs) interact directly with the second PER-ARNT-SIM (PAS) domain of ARNT (ARNT PAS-B). These less studied transcription coactivators play essential roles in the HIF-dependent hypoxia response, and CCC misregulation is associated with several forms of cancer. To better understand CCC protein recruitment by the heterodimeric HIF transcription factor, we used x-ray crystallography, NMR spectroscopy, and biochemical methods to investigate the structure of the ARNT PAS-B domain in complex with the C-terminal fragment of a coiled-coil coactivator protein, transforming acidic coiled-coil coactivator 3 (TACC3). We found that the HIF-2α PAS-B domain also directly interacts with TACC3, motivating an NMR data-derived model suggesting a means by which TACC3 could form a ternary complex with HIF-2α PAS-B and ARNT PAS-B via β-sheet/coiled-coil interactions. Furthermore, these findings suggest that TACC3 could be recruited as a bridge to cooperatively mediate between the HIF-2α PAS-B·ARNT PAS-B complex, thereby participating more directly in HIF-dependent gene transcription than previously anticipated.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Crystal structure of the WFIKKN2 follistatin domain reveals insight into how it inhibits growth differentiation factor 8 (GDF8) and GDF11

Growth differentiation factor 8 (GDF8; also known as myostatin) and GDF11 are closely related members of the transforming growth factor β (TGF-β) family. GDF8 strongly and negatively regulates skeletal muscle growth, and GDF11 has been implicated in various age-related pathologies such as cardiac hypertrophy. GDF8 and GDF11 signaling activities are controlled by the extracellular protein antagonists follistatin; follistatin-like 3 (FSTL3); and WAP, follistatin/kazal, immunoglobulin, Kunitz, and netrin domain–containing (WFIKKN). All of these proteins contain a follistatin domain (FSD) important for ligand binding and antagonism. Here, we investigated the structure and function of the FSD from murine WFIKKN2 and compared it with the FSDs of follistatin and FSTL3. Using native gel shift and surface plasmon resonance analyses, we determined that the WFIKKN2 FSD can interact with both GDF8 and GDF11 and block their interactions with the type II receptor activin A receptor type 2B (ActRIIB). Further, we solved the crystal structure of the WFIKKN2 FSD to 1.39 Å resolution and identified surface-exposed residues that, when substituted with alanine, reduce antagonism of GDF8 in full-length WFIKKN2. Furthermore, comparison of the WFIKKN2 FSD with those of follistatin and FSTL3 revealed differences in both the FSD structure and position of residues within the domain that are important for ligand antagonism. Taken together, our results indicate that both WFIKKN and follistatin utilize their FSDs to block the type II receptor but do so via different binding interactions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Asymptotic, multigroup flux reconstruction and consistent discontinuity factors

Recent theoretical work has led to an asymptotically derived expression for reconstructing the neutron flux from lattice functions and multigroup diffusion solutions. The leading-order asymptotic term is the standard expression for flux reconstruction, i.e., it is the product of a shape function, obtained through a lattice calculation, and the multigroup diffusion solution. The first-order asymptotic correction term is significant only where the gradient of the diffusion solution is not small. Inclusion of this first-order correction term can significantly improve the accuracy of the reconstructed flux. One may define discontinuity factors (DFs) to make certain angular moments of the reconstructed flux continuous across interfaces between assemblies in 1-D. Indeed, the standard assembly discontinuity factors make the zeroth moment (scalar flux) of the reconstructed flux continuous. The inclusion of the correction term in the flux reconstruction provides an additional degree of freedom that can be used to make two angular moments of the reconstructed flux continuous across interfaces by using current DFs in addition to flux DFs. Thus, numerical results demonstrate that using flux and current DFs together can be more accurate than using only flux DFs, and that making the second angular moment continuous can be more accurate than making the zeroth moment continuous.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Application of Eye Tracking for Measurement and Evaluation in Human Factors Studies in Control Room Modernization

An important element of human factors engineering (HFE) pertains to measurement and evaluation (M&E). The role of HFE-M&E should be integrated throughout the entire control room modernization (CRM) process and be used for human-system performance evaluation and diagnostic purposes with resolving potential human engineering deficiencies (HEDs) and other human machine interface (HMI) design issues. NUREG-0711 describes how HFE in CRM should employ a hierarchical set of measures, particularly during integrated system validation (ISV), including plant performance, personnel task performance, situation awareness, cognitive workload, and anthropometric/ physiological factors. Historically, subjective measures have been primarily used since they are easier to collect and do not require specialized equipment. However, there are pitfalls with relying solely on subjective measures in M&E such that negatively impact reliability, sensitivity, and objectivity. Furthermore, as part of comprehensively capturing a diverse set of measures that strengthen findings and inferences made of the benefits from emerging technologies like advanced displays, this paper discusses the value of using eye tracking as an objective method that can be used in M&E. A brief description of eye tracking technology and relevant eye tracking measures is provided. Additionally, technical considerations and the unique challenges with using eye tracking in full-scaled simulations are addressed. Finally, this paper shares preliminary findings regarding the use of a wearable eye tracking system in a full-scale simulator study. These findings should help guide future full-scale simulator studies using eye tracking as a methodology to evaluate human-system performance.

99 GENERAL AND MISCELLANEOUS↗

An experimental study on the uptake factor of tungsten oxide particles resulting from an accidentally dropped storage container

A test procedure was developed and verified to measure the airborne concentrations of particles of different sizes (0.5–20 μm) within the vicinity of a dropped container when a significant portion of the tungsten oxide powder (simulating uranium oxide) is ejected from the container. Tests were carried out in a full-scale stainless steel environmental chamber with an interior volume of 24.1 m 3 . Thirty-two drop tests were performed, covering variations in dropping height, room air movement, landing scenario, and lid condition. Assuming a breathing rate of 1.2 m 3 /hr, the uptake factor during the first 10 min was calculated to be between 1.13 × 10 –9 and 1.03 × 10 –7 in reference to the amount loaded; or between 6.44 × 10 –8 and 3.55 × 10 –4 in reference to the amount spilled. Results provide previously unavailable data for estimating the exposure and associated risk to building occupants in the case of an accidental dropping of heavy powder containers. The test data show that for spills larger than 0.004 g, the power-law correlation between the spill uptake factor and the spilled mass (i.e., SUF = 2.5 × 10 –5 × Spill_Mass –0.667 ) established from the test data is smaller and a more accurate estimate than the constant value of 10 –3 assumed in the Department of Energy Nuclear Material Packaging Manual. [Supplementary materials are available for this article. Go to the publisher's online edition of Journal of Occupational and Environmental Hygiene for the following free supplementary resource: an online supplementary table of all cumulative uptake amounts at 10 min for all test data.]

42 ENGINEERING↗

Spectrum Density Factor of Photons and Its Application in the Casimir Force

The observables of continuous eigenvalues are defined in an infinite-dimensional ket space. The complete set of such eigenstates demands a spectrum density factor, for example, for the photons in the free space and electrons in the vacuum. From the derivation of the Casimir force without an artificial regulator we determine the explicit expression of the spectrum density factor for the photon field to be an exponential function. In conclusion, the undetermined constant in the function is fixed by the experimental data for the Lamb shift. With that, we predict that there exists a correction to the Casimir force.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Solute–solute correlations responsible for the prepeak in structure factors of undercooled Al-rich liquids: A molecular dynamics study

In this study, we have performed molecular dynamics simulations on a typical Al-based alloy Al 90 Sm 10 . The short-range and medium-range correlations of the system are reliably produced by ab initio calculations, whereas the long-range correlations are obtained with the assistance of a semi-empirical potential well-fitted to ab initio data. Our calculations show that a prepeak in the structure factor of this system emerges well above the melting temperature, and the intensity of the prepeak increases with increasing undercooling of the liquid. These results are in agreement with x-ray diffraction experiments. The interplay between the short-range order of the system originating from the large affinity between Al and Sm atoms, and the intrinsic repulsion between Sm atoms gives rise to a stronger correlation in the second peak than the first peak in the Sm–Sm partial pair correlation function (PPCF), which in turn produces the prepeak in the structure factor.

36 MATERIALS SCIENCE↗

QCD factorization and quantum mechanics

It is unusual to find quantum chromodynamics (QCD) factorization explained in the language of quantum information science. However, we will discuss how the issue of factorization and its breaking in high-energy QCD processes relates to phenomena like decoherence and entanglement. Further, we will elaborate with several examples and explain them in terms familiar from basic quantum mechanics and quantum information science.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

High precision measurements of the proton elastic electromagnetic form factors and their ratio at 𝑄 2 = 0.50, 2.64, 3.20, and 4.10 GeV 2

The advent of high-intensity, high-polarization electron beams led to significantly improved measurements of the ratio of the proton’s charge to electric form factors, 𝐺 𝐸⁢ 𝑝 ⁡/𝐺 𝑀⁢ 𝑝 . However, high-𝑄 2 measurements of this ratio yielded significant disagreement with extractions based on unpolarized scattering measurements, raising questions about the reliability of the measurements and consistency of the techniques. Jefferson Lab experiment E01-001 was designed to provide a high precision extraction of 𝐺 𝐸⁢ 𝑝 ⁡/𝐺 𝑀⁢ 𝑝 from unpolarized cross-section measurements using a modified version of the Rosenbluth separation technique to allow for a more precise comparison with polarization data. Rosenbluth separations involve precise measurements of the angular dependence of the elastic 𝑒−𝑝 cross section at fixed momentum transfer, 𝑄 2 . Conventional Rosenbluth separations detect the scattered electron, requiring the comparisons of measurements with very different detected electron energy and rate for electrons at different angles. Our ‘‘super-Rosenbluth’’ measurement detected the struck proton, rather than the scattered electron to extract the elastic 𝑒−𝑝 cross section. This yielded a fixed momentum for the detected particle and dramatically reduced variation of the cross section with angle, significantly reducing rate- and momentum-dependent corrections and uncertainties. We measure the cross section vs angle with high relative precision, allowing for extremely high precision extractions of 𝐺 𝐸⁢ 𝑝 ⁡/𝐺 𝑀⁢ 𝑝 at 𝑄 2 = 2.64, 3.20, and 4.10 GeV 2 . Our results are consistent with traditional Rosenbluth extractions, but with much smaller corrections and systematic uncertainties, comparable to the uncertainties from polarization measurements. Our data confirm the discrepancy between Rosenbluth and polarization extractions of the proton form factor ratio using an improved Rosenbluth extraction that yields smaller and less-correlated uncertainties than those typical of previous Rosenbluth extractions. Here, we compare our results to calculations of two-photon exchange effects and find that the observed discrepancy can be relatively well explained by such effects.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Mechanical form factors and densities of nonrelativistic fermions

The hadron physics community has been actively debating the interpretation of so-called mechanical properties of hadrons. Nonrelativistic quantum-mechanical systems like the hydrogen atom have been appealed to in these debates as analogies. Since such appeals are likely to continue, it is important to have Galilei-covariant expressions for matrix elements of the energy-momentum tensor. In this work, I obtain Galilei-covariant breakdowns of such matrix elements into mechanical form factors, with a special focus on spin-half states. I additionally study the spatial densities associated with these form factors, using the pilot wave interpretation to guide their breakdown into contributions from internal structure and from quantum-mechanical effects such as wave packet dispersion. For completeness, I also obtain nonrelativistic Breit frame densities.

form factors↗

How analytic choices can affect the extraction of electromagnetic form factors from elastic electron scattering cross section data

Scientists often try to incorporate prior knowledge into their regression algorithms, such as a particular analytic behavior or a known value at a kinematic endpoint. Unfortunately, there is often no unique way to make use of this prior knowledge, and thus, different analytic choices can lead to very different regression results from the same set of data. In this paper, to illustrate this point in the context of the proton electromagnetic form factors, we use the Mainz elastic data with its 1422 cross section points and 31 normalization parameters. Starting with a complex unbound non-linear regression, we will show how the addition of a single theory-motivated constraint removes an oscillation from the magnetic form factor and shifts the extracted proton charge radius. We then repeat both regressions using the same algorithm, but with a rebinned version of the Mainz dataset. These examples illustrate how analytic choices, such as the function that is being used or even the binning of the data, can dramatically affect the results of a complex regression. These results also demonstrate why it is critical when using regression algorithms to have either a physical model in mind or a firm mathematical basis

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Coriolis coupling effects in proton-pickup spectroscopic factors from 12 B

Spectroscopic factors to low-lying negative-parity states in Be 11 extracted from the B 12 ( d , He 3 ) Be 11 proton-removal reaction are interpreted within the rotational model. Earlier predictions of the p -wave proton-removal strengths in the strong-coupling limit of the Nilsson model underestimated the spectroscopic factors to the 3 / 2 1 - and 5 / 2 1 - states and suggested that deviations in the 1 + ground state of the odd-odd B 12 due to Coriolis coupling should be further explored. Furthermore, in this work we use the particle rotor model to take into account these effects and obtain a good description of the level scheme in B 11 , with a moderate K mixing of the proton Nilsson levels [110]1/2 and [101]3/2. This mixing, present in the 1 + bandhead of B 12 , is key to explaining the proton-pickup data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Helium-4 gravitational form factors: Exchange currents

We evaluate the leading exchange corrections to the helium-4 gravitational form factors (GFFs) to momenta of the order of the nucleon mass. We use both the K-harmonic method with simple pair nucleon potential, and a Jastrow trial function using the Argonne 𝑣 14 potential, to evaluate the helium-4 GFFs. The exchange current contributions include the pair interaction, plus the seagull and the pion exchange interactions, modulo the recoil corrections. To estimate the off-shellness of the pion nucleon coupling in this momenta range, we discuss the results using either the pseudoscalar (PS) or pseudovector (PV) pion-nucleon couplings. When the PV coupling is used, the pair diagram contribution is higher order in the nonrelativistic expansion. The results for the helium-4 A-GFF are comparable to those given by the impulse approximation, especially for the PS coupling using both the K-harmonic method and variational method. The exchange current contributions with the PS coupling for the charge form factor of helium-4, yield better agreement with the existing data over a broad range of momenta, especially when the Argonne 𝑣 14 potential including the D-wave admixture is used.

A ≤ 5↗

Longitudinal form Factors of A ≤ 10 Nuclei in a Chiral Effective Field Theory Approach

Here, in this work, we present the elastic electron scattering longitudinal form factors of A ≤ 10 nuclei computed in a variational Monte Carlo approach. We employ the Norfolk family of local chiral interactions and a consistent electromagnetic charge operator. Our calculations are compared both to data and past theoretical evaluations. This work represents, to our knowledge, the first accurate calculation of longitudinal form factors using manybody methods based on interacting nucleon degrees of freedom in the 7 ≤ A ≤ 10 mass range. Finally, we identify 9 Be and 10 B as candidate targets for renewed experimental interest, as they exhibit the potential to provide more stringent constraints on the theoretical models.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Baryon transition form factors at the pole

Electromagnetic resonance properties are uniquely defined at the pole and do not depend on the separation of the resonance from background or the decay channel. Photon-nucleon branching ratios are nowadays often quoted at the pole, and we generalize the considerations to the case of virtual photons. In this paper, we derive and compare relations for nucleon to baryon transition form factors both for the Breit-Wigner and the pole positions. Using the MAID2007 and SAID SM08 partial wave analyses of pion electroproduction data, we compare the $G_M$, $G_E$, and $G_C$ form factors for the $\Delta(1232)$ resonance excitation at the Breit-Wigner resonance and pole positions up to $Q^2=5$ GeV$^2$. We also explore the $E/M$ and $S/M$ ratios as functions of $Q^2$. Finally, for pole and residue extraction, we apply the Laurent + Pietarinen method.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Nucleon axial-vector form factor and radius from future neutrino experiments

Precision measurements of antineutrino elastic scattering on hydrogen from future neutrino experiments offer a unique opportunity to access the low-energy structure of protons and neutrons. We discuss the determination of the nucleon axial-vector form factor and radius from antineutrino interactions on hydrogen that can be collected at the future Long-Baseline Neutrino Facility and study the sources of theoretical and experimental uncertainties. The projected accuracy would improve existing measurements by 1 order of magnitude and be competitive with contemporary lattice-QCD determinations, potentially helping to resolve the corresponding tension with measurements from (anti)neutrino elastic scattering on deuterium. We find that the current knowledge of the nucleon vector form factors could be one of the dominant sources of uncertainty. We also evaluate the constraints that can be simultaneously obtained on the absolute ν ¯ μ flux normalization. Published by the American Physical Society 2024

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Accessing the gravitational form factors of the nucleon and nuclei through a massive graviton

In contrast to the electromagnetic form factors of the nucleon and nuclei that have been extensively studied in electron scattering, there is no known way to directly measure the gravitational form factors (GFFs), the off-forward hadronic matrix element of the QCD energy-momentum tensor. I suggest exploring the possibility to access the GFFs of the proton and nuclei in conjunction with massive graviton searches at future TeV-scale lepton-ion colliders. Published by the American Physical Society 2024

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Pion gravitational form factors in the QCD instanton vacuum. II

We revisit the hard QCD contributions to the pion gravitational form factors, in terms of the twist-2,3 pion distribution amplitudes (DAs), including novel semihard contributions from the instantons. The pion DAs are evaluated in the QCD instanton vacuum and then properly evolved to higher resolution. The results are compared to our recent results from the QCD instanton vacuum, as well as Bethe-Salpeter calculations and recent lattice data. The interpolated hard and soft contributions to the pion D form factor are used to derive the (gravitational) pressure and shear within the pion, with a clear delineation of their range.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗