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At least 1,153 records · Page 64

TRIM16 overexpression inhibits the metastasis of colorectal cancer through mediating Snail degradation

Highlights: • TRIM16 does significantly inhibit CRC cell migration and metastasis. • TRIM16 negatively regulates CRC cells EMT. • TRIM16 directly interacts with Snail. • TRIM16 promotes degradation of Snail via ubiquition proteasome pathway. Tripartite motif containing 16 (TRIM16) is a member of the tripartite motif protein family and functions as a potential tumor suppressor in several cancers. However, the specific function and clinical significance of TRIM16 in colorectal cancer (CRC) remains unclear. In this study, we observed that low TRIM16 expression was detected frequently in primary colorectal cancer (CRC) tissues and was closely associated with a better prognosis. Functional studies demonstrate that TRIM16 overexpression notably inhibits the metastasis abilities of CRC in vivo and in vitro. Mechanistically, our results demonstrated that TRIM16 directly bound and ubiquitinated Snail family transcriptional repressor 1 (Snail), an important transcriptional factor of the epithelial-mesenchymal transition (EMT) process suppressing the EMT in CRC. Additionally, our data revealed that the inhibition effect of TRIM16 on cancer metastasis was dependent on Snail degradation. Collectively, our study is the first to report that TRIM16 plays a crucial anti-tumor role in CRC tumorigenesis. We also provided novel evidence that TRIM16 might act as a prognostic and therapeutic target to assess and inhibit CRC progression.

60 APPLIED LIFE SCIENCES↗

Sensitive detection of structural dynamics using a statistical framework for comparative crystallography

Chemical and conformational changes are crucial to protein function and its pharmacological control. X-ray crystallography can reveal these changes in atomic detail, but standard analysis methods, which refine separate datasets, often overlook differences that are subtle or arise in only a subset of molecules. Direct comparison of crystallographic datasets is, in principle, more powerful, but systematic errors (“scales”) often mask changes in the crystallographic observables (“structure factors”). Machine learning algorithms that jointly estimate scales and structure factors can address this limitation. Here, we augment this approach with multivariate, structured priors derived from crystallographic theory, implemented in the variational deep learning framework Careless. Doing so strongly improves the detection of protein dynamics, element-specific anomalous signals, and the binding of drug candidates, offering a robust approach to comparative crystallography and, potentially, to detection of protein dynamics by other structure determination methods.

Hekstra, Doeke R. [Harvard Univ., Cambridge, MA (U↗

Nuclear Recoil Calibration at Sub-keV Energies in LUX and Its Impact on Dark Matter Search Sensitivity

Dual-phase xenon time projection chamber (TPC) detectors offer heightened sensitivities for dark matter detection across a spectrum of particle masses. To broaden their capability to low-mass dark matter interactions, we investigated the light and charge responses of liquid xenon (LXe) to sub-keV nuclear recoils. Using neutron events from a pulsed Adelphi Deuterium-Deuterium neutron generator, an in situ calibration was conducted on the LUX detector. We demonstrate direct measurements of light and charge yields down to 0.45 keV and 0.27 keV, respectively, both approaching single quanta production, the physical limit of LXe detectors. Furthermore, these results hold significant implications for the future of dual-phase xenon TPCs in detecting low-mass dark matter via nuclear recoils.

Dark matter detectors↗

Harnessing the Power of AI: Status and Expansion of Current Domestic Transport Security Through Flexible Embedded Hardware

As applications of Artificial Intelligence (AI) continue to expand, there are increasing opportunities to leverage applied AI methodologies with mobile transportation focused embedded systems. Current applications of AI in transportation focus on a variety of areas, including fuel efficiency, safety, security, and other broad fields of optimization or detection. To leverage these AI workflows and methodologies in the field, teams must utilize complex embedded systems capable of implementing these AI-enabled algorithms in real-time. In this paper, we will investigate how these algorithms can be integrated into existing technologies leveraging vehicle data - such as the Controller Area Network Transport Security Tracking and Reporting Unit (C-STAR). The C-STAR technology is an embedded platform with onboard computation capable of running next generation algorithms in vehicle systems AI, such as preventative maintenance, driver authentication, and transport security. As deployed in the field, the C-STAR has a limited AI functionality –this paper will directly discuss how a device like C-STAR can be utilized and the advantages of integrating these new technologies. We will open with relevant background information and transportation projects that leverage AI, focusing specifically on those around transport security such as vehicle identification, anomaly detection, and deterrence. We will then extend this into potential opportunities and scaling for AI methodologies using platforms like the C-STAR. Finally, we will speak directly to the challenges of deploying AI-powered workflows, such as computing power needs, bandwidth, hallucinations, and other regulatory considerations.

Cook, Adian [ORNL] (ORCID:0000000160825395)↗

Direct Mapping of Polyclonal Epitopes in Serum by HDX-MS

Elucidating the interactions that drive antigen recognition is central to understanding antibody-mediated protection and is vital for the rational design of immunogens. Often, structural knowledge of epitopes targeted by antibodies is derived from isolated studies of monoclonal antibodies, for which numerous structural techniques exist. In contrast, there are very few approaches capable of mapping the full scope of antigen surfaces targeted by polyclonal sera through the course of a natural antibody response. Here, in this study, we develop an approach using immobilized antigen coupled to hydrogen/deuterium exchange with mass spectrometry (HDX-MS) to probe epitope targeting in the context of the fully native serum environment. Using the well-characterized Staphylococcal enterotoxin B (SEB) as a model system, we show that complex combinations of epitopes can be detected and subtle differences across different anti-sera can be discerned. This work reveals new insight into how neutralizing antibodies and antisera target SEB, and more importantly, establishes a novel method for directly mapping the epitope landscape of polyclonal sera.

antigens↗

Event Reconstruction for Water-based Liquid Scintillator Detectors

Water Cherenkov and liquid scintillator detectors represent two complementary approaches in neutrino physics. Water Cherenkov detectors provide particle track direction and particle identification (PID) through Cherenkov ring topology, while liquid scintillator detectors offer higher light yield and lower energy thresholds. Water-based liquid scintillator (WbLS) is designed to combine the advantages of both technologies. However, the simultaneous detection of Cherenkov and scintillation light by photosensors introduces significant challenges for event reconstruction. This poster presents event reconstruction studies for WbLS detectors. A likelihood-based reconstruction framework, fiTQun, has been successfully used in Super-Kamiokande to reconstruct water Cherenkov events in cylindrical detectors. We extend and improve this framework to demonstrate event reconstruction in WbLS detectors, enabling the concurrent reconstruction of particle energy, PID, vertex, and direction. The results demonstrate competitive performance in energy resolution, PID separation, and vertex and direction reconstruction, highlighting the strong potential of WbLS for next-generation neutrino experiments.

Xie, Zhenxiong [Minnesota U.] (ORCID:0009000301442↗

Narrowing lab–to–market gaps: Device innovations in fuel generation, solar–cell, and photodetection

Academic translational research efforts to industry are often an underlying sought–after goal among various researchers. Through the interchanges of research endeavors between academia–industry, great innovations can/has been achieved that cater to the real–world application by bridging “industrially relevant” problem solving with pursuing fundamental studies. It is pertinent that most of the studies from university–level research works may not translate into demonstrable market products due to various reasons. Funding support, individual researcher goals, socioeconomic factors, and most importantly the technical know–how of generating revenue strategies for startups, are a few of the factors that have slowed the pace of collaborative efforts. However, we believe that the most crucial component is the identification of the critical parameters that solve long–standing problems that hinder the scale–up of the lab scale research into marketable products considering the techno–economic analysis. Here, to illustrate this, we take the three most relevant examples of devices for fuel generation, devices to utilize solar radiation, and devices for detection and other related applications. In this perspective, we provide an in–depth case study of each of these critical parameters to comment on the direction of research avenues that can serve as step–stones for the commercialization of university–level lab research studies.

42 ENGINEERING↗

Protection Scheme for Multiterminal HVDC System Based on Wavelet Transform Modulus Maxima

Fault protection is a major issue in the development of multiterminal high‐voltage direct current (HVDC) system based on voltage‐source converter. Owing to the rapid increase in fault current under DC faults, protection requires a fast fault detection method to isolate the fault current. However, the selectivity and reliability of the fast protection scheme should be primarily guaranteed. Therefore, a new protection strategy based on modulus maximum under wavelet transform is proposed in this paper. Fault detection and discrimination are achieved using single‐end signals of fault current. The external and internal faults can be discriminated via local information. The reliability and robustness of the proposed scheme against potential factors are verified. Numerous simulation cases are performed in PSCAD/EMTDC under different fault scenarios, and signal data are analyzed in MATLAB to demonstrate the effectiveness of the proposed fault protection scheme. © 2020 Institute of Electrical Engineers of Japan. Published by Wiley Periodicals LLC.

Huai, Qing↗

Parton distribution function uncertainties in theoretical predictions for far-forward tau neutrinos at the Large Hadron Collider

New experiments dealing with neutrinos in the far-forward region at the Large Hadron Collider (LHC) are under design or already in preparation. Two of them, FASERν and SND@LHC, are expected to be active during Run 3 and have the potential to detect the interactions of ν and $\bar {v}$ that come from high-energy collisions in one of the LHC interaction points, extracted along the direction tangent to the beam line. Tau neutrinos and antineutrinos come predominantly from $D^{±}_{s}$ production in pp collisions, followed by the leptonic decay of these mesons. Neutrino pseudorapidities in the range of η > 6.9 and η > 8.9 are relevant to these future experiments. At such pseudorapidities at high energies, QCD theoretical predictions for the flux of ν τ plus $\bar {v}_τ$ rely on parton distribution functions (PDFs) in a combination of very small and large parton–x values. We evaluate PDF un certainties affecting the flux of ν τ + $\bar {v}_τ$ produced by $D^{±}_{s}$ decay in the far forward region at the LHC. Next-to-leading order (NLO) QCD uncertainties are included in the calculation of $D^{±}_{s}$ production and NLO PDF sets are used for consistency. The theoretical uncertainty associated with the 40 PDF sets of the PROSA19 group amounts to ±(20 – 30)% for the (ν τ + $\bar {v}_τ$) number of charged-current (CC) events. Scale uncertainties are much larger, resulting in a range of CC event predictions from ~70% lower to ~90% higher than the central prediction. A comparison of the predictions with those obtained using as input the central PDFs from the 3-flavour NLO PDF sets of the CT14, ABMP16 and NNPDF3.1 collaborations show that far-forward neutrino energy distributions vary by as much as a factor of ~2 – 4 relative to the PROSA19 predictions at TeV neutrino energies. The Forward Physics Facility in the high luminosity LHC era will provide data capable of constraining NLO QCD evaluations with these PDF sets.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Development of limited-view tomography for measurement of Spray G plume direction and liquid volume fraction

Abstract The method for direct injection of fuel in the cylinder of an IC engines is important to high-efficiency and low-emission performance. Optical spray diagnostics plays an important role in understanding plume movement and interaction for multi-hole injectors, and providing baseline understanding used for computational optimization of fuel delivery. Traditional planar or line-of-sight diagnostics fail to capture the liquid distribution because of optical thickness concerns. This work proposes a high-speed (67 kHz) extinction imaging technique at various injector rotations coupled to computed tomography (CT) for time-resolved reconstruction of liquid volume fraction in three dimensions. The number of views selected and processing were based on synthetic (modeled) liquid volume fraction data where extinction and CT adequately reconstructed each plume. The exercise showed that for an 8-hole, symmetric-design injector (ECN Spray G), only three different views are enough to reproduce the direction of each plume, and particularly the mean plume direction. Therefore, the number of views was minimized for experiments to save expense. Measurements applying this limited-view technique confirm plume–plume variations also detected with mechanical patternation, while providing better spatial and temporal resolution than achieved previously. Uncertainties due to the limited view within pressurized spray chambers, the droplet size, and optically thick regions are discussed. Graphic abstract

42 ENGINEERING↗

Effect of radiation exposure on survival after first solid cancer diagnosis in A-bomb survivors

Comparison of the estimated effect of atomic bomb radiation exposure on solid cancer incidence and solid cancer mortality in the RERF Life Span Study (LSS) reveals a difference in the magnitude and shape of the excess relative risk dose response. A possible contributing factor to this difference is pre-diagnosis radiation effect on post-diagnosis survival. Pre-diagnosis radiation exposure theoretically could influence post-diagnosis survival by affecting the genetic makeup and possibly aggressiveness of cancer, or by compromising tolerance for aggressive treatment for cancer. We analyze the radiation effect on post-diagnosis survival in 20,463 LSS subjects diagnosed with first-primary solid cancer between 1958 and 2009 with particular attention to whether death was caused by the first-primary cancer, other cancer, or non-cancer diseases. From multivariable Cox regression analysis of cause-specific survival, the excess hazard at 1 Gy (EH 1Gy ) for death from the first primary cancer was not significantly different from zero – p = 0.23, EH 1Gy = 0.038 (95 % CI: –0.023, 0.104). Death from other cancer and death from non-cancer diseases both were significantly associated with radiation dose: other cancer EH 1Gy = 0.38 (95 % CI: 0.24, 0.53); non-cancer EH 1Gy = 0.24 (95 % CI: 0.13, 0.36), both p < 0.001. There is no detectable large effect of pre-diagnosis radiation exposure on post-diagnosis death from the first primary cancer in A-bomb survivors. A direct effect of pre-diagnosis radiation exposure on cancer prognosis is ruled out as an explanation for the difference in incidence and mortality dose response in A-bomb survivors.

60 APPLIED LIFE SCIENCES↗

Ultrasonic degradation of GenX (HFPO-DA) – Performance comparison to PFOA and PFOS at high frequencies

Sonolytic degradation kinetics of hexafluoropropylene oxide-dimer acid (HFPO-DA or GenX) were studied for the first time at four high ultrasonic frequencies (375, 580, 860 and 1,140kHz) and three power densities (200, 300 and 400W/L), and compared to the degradation of previously studied perfluorooctanoic acid (PFOA) and perfluorooctanesulfonic acid (PFOS). The frequency of 580kHz displayed the highest degradation of all three PFAS tested. Within each frequency, the degradation performance increased consistently with increasing power density. Degradation rates were highest for GenX over PFOA to PFOS (k GenX = 0.0501 min -1 , k PFOA = 0.0444 min -1 , k PFOS 0.0153 min -1 ), which is in direct agreement with their reported thermal stability (PFOS > PFOA > GenX). No known by-product formation as expected from the literature on truncation mechanism was detected in the samples (i.e. shorter chain carboxylic acid PFAS). Further, fluorine mass balance experiments at 580kHz and 400W/ L confirmed that GenX defluorinated fastest among the three tested PFAS and had lowest loss of fluorine in the mass balance. Degradation experiments with a mixture of all three PFAS displayed lower degradation rates than the individual experiments, where PFOA exhibited the largest reduction in degradation rate (by 31%), followed by GenX (by 19%), and finally by PFOS (by 17%). Overall, our study demonstrates that ultrasound can provide effective destruction of different PFAS (70-90% fluorine from mitigated PFAS was detected as inorganic fluoride) with a similar energy demand to alternative PFAS treatment methods reported in literature.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Time-lapse seismic inversion for CO 2 saturation with SeisCO2Net: An application to Frio-II site

Seismic monitoring of geological CO 2 storage (GCS) involves highly nonlinear seismic inversion and petrophysical inversion, making it challenging to estimate CO 2 volume efficiently and detect possible early CO 2 leakages. Deep learning (DL) using convolutional neural networks (CNNs) has shown promise in solving highly nonlinear seismic inversion problems. However, direct estimation of CO 2 plume extent/saturation from time-lapse seismic gathers using DL is still underexplored, with no reported field applications to date. The investigation of field data is primarily hindered by scarcity of field data for neural network training. Other obstacles include highly nonlinear seismic-petrophysics inverse relationship, and presence of noise in field seismic data. We introduce SeisCO2Net, a deep CNN that predicts CO 2 saturation maps directly from time-lapse full waveform shot gathers. For training, we use site-specific geological information, fluid flow physics, rock physics, and seismic modeling to generate synthetic datasets that closely resemble the CO 2 storage site. Synthetic tests show promising results, inspiring us to apply SeisCO2Net's trained weights on field data collected at Frio-II GCS site by leveraging transfer learning principles. As reference, we compare SeisCO2Net's predicted CO 2 saturation maps with results obtained from physics-based inversion. Our analyses show both methods display similar CO 2 plume shapes, reasonable CO 2 plume characteristics, and comparable saturation values. Our results suggest pre-training CNNs on physics-informed synthetic datasets and then applying the learned weights to field data is a viable approach to estimating field CO 2 saturation. This method effectively addresses the scarcity of field training data, thus encouraging the feasibility of long-term GCS monitoring.

58 GEOSCIENCES↗

Synthesis and application of thermally responsive nanofiber coatings for overtemperature monitoring

This study presents a one-pot synthesis route to organometallic nanofibers based on copper thiolate, exhibiting distinctive chemical and physical characteristics. Electron microscopy analysis of morphology and composition revealed 2-10 μm-long, 50-90 nm-diameter hollow and non-hollow fibers composed of copper, sulfur, oxygen, hydrocarbon, and chlorine. Thermogravimetric analysis showed a pronounced mass loss within 120°C-135°C. To elucidate the thermal responsive pathways, the nanofibers were characterized before and after heating. X-ray photoelectron spectroscopy indicates that an initially mixed Cu(I)/Cu(II) oxidation states transition to predominantly Cu(I) upon heating. A layer of nanofiber was coated on battery pouch foil and evaluated as a candidate thermally sensitive coating. At elevated temperature (100-130°C), nanofiber coating released volatile organic compounds, sulfide and sulfur dioxide as detected using multiple gas sensors. This thermally responsive gas release/sensing approach provides a potential large-area temperature monitoring strategy, which is particularly relevant where direct temperature measurements of individual batteries is impractical. The results established proof of concept for nanofiber-coated battery pouch foil as overtemperature warning platform that can provide alerts when surface temperatures exceed a critical threshold. More broadly, the ability to form interconnected fiber networks positions copper thiolate nanofiber coatings as promising materials for advanced applications.

Ihala Gamaralalage, Chanaka [ORNL] (ORCID:00000002↗

Observing differential spin currents by resonant inelastic X-ray scattering

Controlling spin currents, that is, the flow of spin angular momentum, in small magnetic devices, is the principal objective of spin electronics, a main contender for future energy-efficient information technologies. A pure spin current has never been measured directly because the associated electric stray fields and/or shifts in the non-equilibrium spin-dependent distribution functions are too small for conventional experimental detection methods optimized for charge transport. Here we report that resonant inelastic X-ray scattering (RIXS) can bridge this gap by measuring the spin current carried by magnons—the quanta of the spin wave excitations of the magnetic order—in the presence of temperature gradients across a magnetic insulator. This is possible due to the sensitivity of the momentum- and energy-resolved RIXS intensity to minute changes in the magnon distribution under non-equilibrium conditions. Furthermore, we use the Boltzmann equation in the relaxation time approximation to extract transport parameters, such as the magnon lifetime at finite momentum, essential for the realization of magnon spintronics.

36 MATERIALS SCIENCE↗

Advances in detection for neutron reflectometry with time-resolved imaging detectors

Thermal neutron detection in neutron scattering science is a challenging endeavour due to a limited number of technologies which are sensitive to these weakly interacting particles. While many improvements to conventional detectors are underway at various facilities, there is a great opportunity to make a leap in performance by combining the spatial resolution benefits of imaging and the temporal resolution and background discrimination of event-driven radiation detectors. This idea has been realized by using a neutron sensitive scintillator read out by a single-photon sensitive camera based on a Timepix3 ASIC. We demonstrate how such data-driven imaging sensors can enable unprecedented performance in neutron reflectometry using the ASTERIX instrument at the Los Alamos Neutron Scattering Center. Several samples were measured with both the new and a conventional 3 He detector systems. The results from this work demonstrate that these imaging based systems can satisfy performance parameters for the future QIKR reflectometer to be built at the Second Target Station at Oak Ridge National Laboratory. Further improvements to the detector are already underway which will allow streamlined and expedited experiments. We demonstrate at least a two order of magnitude increase in detection rate at an acceptable dead time and introduce a new way of tuning the detector efficiency using light collecting optics to accommodate highly intense direct beams which cannot be measured with any current detectors without severe attenuation. This will allow measurements of complete reflectometry profiles and using a single sample measurement combined with fewer direct beam calibration measurements on QIKR and potentially other reflectometers.

36 MATERIALS SCIENCE↗

Refining the thermochemical properties of CF, SiF, and their cations by combining photoelectron spectroscopy, quantum chemical calculations, and the Active Thermochemical Tables approach

Fluorinated species have a pivotal role in semiconductor material chemistry and some of them have been detected beyond the Earth's atmosphere. Achieving good energy accuracy on fluorinated species using quantum chemical calculations has long been a challenge. In addition, obtaining direct experimental thermochemical quantities has also proved difficult. Here, we report the threshold photoelectron and photoion yield spectra of SiF and CF radicals generated with a fluorine reactor. The spectra were analysed with the support of ab initio calculations, resulting in new experimental values for the adiabatic ionisation energies of both CF (9.128 ± 0.006 eV) and SiF (7.379 ± 0.009 eV). Using these values, the underlying thermochemical network of Active Thermochemical Tables was updated, providing further refined enthalpies of formation and dissociation energies of CF, SiF, and their cationic counterparts.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Star formation and AGN feedback in the local Universe: Combining LOFAR and MaNGA

The effect of active galactic nuclei (AGN) on their host galaxies – in particular their levels of star formation – remains one of the key outstanding questions of galaxy evolution. Successful cosmological models of galaxy evolution require a fraction of energy released by an AGN to be redistributed into the interstellar medium to reproduce the observed stellar mass and luminosity function and to prevent the formation of over-massive galaxies. Observations have confirmed that the radio-AGN population is energetically capable of heating and redistributing gas at all phases, however, direct evidence of AGN enhancing or quenching star formation remains rare. With modern, deep radio surveys and large integral field spectroscopy (IFS) surveys, we can detect fainter synchrotron emission from AGN jets and accurately probe the star-forming properties of galaxies, respectively. Here, in this paper, we combine data from the LOw Frequency ARray Two-meter Sky Survey (LoTSS) with data from one of the largest optical IFS surveys, Mapping Nearby Galaxies at Apache Point Observatory (MaNGA), to probe the star-forming properties of 307 local (z < 0.15) galaxies that host radio-detected AGN (RDAGN). We compare our results to a robust control sample of non-active galaxies that each match the stellar mass, redshift, visual morphology, and inclination of a RDAGN host. We find that RDAGN and control galaxies have broad star-formation rate (SFR) distributions, typically lie below the SFMS, and have negative stellar light-weighted age gradients. These results indicate that AGN selected based on their current activity are not responsible for suppressing their host galaxies’ star formation. Rather, our results support the maintenance mode role that radio AGN are expected to have in the local Universe.

79 ASTRONOMY AND ASTROPHYSICS↗