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NASA NTRS2012

Exploratory Climate Data Visualization and Analysis Using DV3D and UVCDAT

Earth system scientists are being inundated by an explosion of data generated by ever-increasing resolution in both global models and remote sensors. Advanced tools for accessing, analyzing, and visualizing very large and complex climate data are required to maintain rapid progress in Earth system research. To meet this need, NASA, in collaboration with the Ultra-scale Visualization Climate Data Analysis Tools (UVCOAT) consortium, is developing exploratory climate data analysis and visualization tools which provide data analysis capabilities for the Earth System Grid (ESG). This paper describes DV3D, a UV-COAT package that enables exploratory analysis of climate simulation and observation datasets. OV3D provides user-friendly interfaces for visualization and analysis of climate data at a level appropriate for scientists. It features workflow inte rfaces, interactive 40 data exploration, hyperwall and stereo visualization, automated provenance generation, and parallel task execution. DV30's integration with CDAT's climate data management system (COMS) and other climate data analysis tools provides a wide range of high performance climate data analysis operations. DV3D expands the scientists' toolbox by incorporating a suite of rich new exploratory visualization and analysis methods for addressing the complexity of climate datasets.

Maxwell, Thomas↗

NASA NTRS2012

Application Programming in AWIPS II

Since its inception almost 8 years ago, NASA's Short-term Prediction Research and Transition (SPoRT) Center has integrated NASA data into the National Weather Service's decision support system (DSS) the Advanced Weather Interactive Processing System (AWIPS). SPoRT has, in some instances, had to shape and transform data sets into various formats and manipulate configurations to visualize them in AWIPS. With the advent of the next generation of DSS, AWIPS II, developers will be able to develop their own plugins to handle any type of data. Raytheon is developing AWIPS II to be a more extensible package written mainly in Java, and built around a Service Oriented Architecture. A plugin architecture will allow users to install their own code modules, and (if all the rules have been properly followed) they will work hand-in-hand with AWIPS II as if it were originally built in. Users can bring in new datasets with existing plugins, tweak plugins to handle a nuance or desired new functionality, or create an entirely new visualization layout for a new dataset. SPoRT is developing plugins to ensure its existing NASA data will be ready for AWIPS II when it is delivered, and to prepare for the future of new instruments on upcoming satellites.

Smit, Matt↗

NASA NTRS1977

Packaging of a large capacity magnetic bubble domain spacecraft recorder

A Solid State Spacecraft Data Recorder (SSDR), based on bubble domain technology, having a storage capacity of 10 to the 8th power bits, was designed and is being tested. The recorder consists of two memory modules each having 32 cells, each cell containing sixteen 100 kilobit serial bubble memory chips. The memory modules are interconnected to a Drive and Control Unit (DCU) module containing four microprocessors, 500 integrated circuits, a RAM core memory and two PROM's. The two memory modules and DCU are housed in individual machined aluminum frames, are stacked in brick fashion and through bolted to a base plate assembly which also houses the power supply.

Becker, F. J.↗

NASA NTRS1982

Solar analysis of solar-constant monitoring package (SMM)

The activity cavity radiometer irradiance monitor is supplying the first high precision data on solar total irradiance at the Earth. Thee classes of variability were discovered: large variations of amplitudes up to 0.2%; small high frequency variations in the form of a continuum in the periodogram, extending up to the Nyquist frequency; and sharp spikes at frequencies corresponding to the individual p modes already known from radial velocity measurements. The observed variations (up to 0.3%, on time scales of several days) were identified with sunspot darkness. The data analysis is expected to give information about the solar interior, as well as about the solar input to the terrestrial climate.

Hudson, H. S.↗

NASA NTRS1995

Magnetic Field Experiment Data Analysis System

The Johns Hopkins University Applied Physics Laboratory (JHU/APL) Magnetic Field Experiment Data Analysis System (MFEDAS) has been developed to process and analyze satellite magnetic field experiment data from the TRIAD, MAGSAT, AMPTE/CCE, Viking, Polar BEAR, DMSP, HILAT, UARS, and Freja satellites. The MFEDAS provides extensive data management and analysis capabilities. The system is based on standard data structures and a standard user interface. The MFEDAS has two major elements: (1) a set of satellite unique telemetry processing programs for uniform and rapid conversion of the raw data to a standard format and (2) the program Magplot which has file handling, data analysis, and data display sections. This system is an example of software reuse, allowing new data sets and software extensions to be added in a cost effective and timely manner. Future additions to the system will include the addition of standard format file import routines, modification of the display routines to use a commercial graphics package based on X-Window protocols, and a generic utility for telemetry data access and conversion.

Holland, D. B.↗

NASA NTRS1975

The control data "GIRAFFE" system for interactive graphic finite element analysis

The Graphical Interface for Finite Elements (GIRAFFE) general purpose interactive graphics application package was described. This system may be used as a pre/post processor for structural analysis computer programs. It facilitates the operations of creating, editing, or reviewing all the structural input/output data on a graphics terminal in a time-sharing mode of operation. An application program for a simple three-dimensional plate problem was illustrated.

Park, S.↗

NASA NTRS2001

An Evaluation of Fractal Surface Measurement Methods for Characterizing Landscape Complexity from Remote-Sensing Imagery

The rapid increase in digital data volumes from new and existing sensors necessitates the need for efficient analytical tools for extracting information. We developed an integrated software package called ICAMS (Image Characterization and Modeling System) to provide specialized spatial analytical functions for interpreting remote sensing data. This paper evaluates the three fractal dimension measurement methods: isarithm, variogram, and triangular prism, along with the spatial autocorrelation measurement methods Moran's I and Geary's C, that have been implemented in ICAMS. A modified triangular prism method was proposed and implemented. Results from analyzing 25 simulated surfaces having known fractal dimensions show that both the isarithm and triangular prism methods can accurately measure a range of fractal surfaces. The triangular prism method is most accurate at estimating the fractal dimension of higher spatial complexity, but it is sensitive to contrast stretching. The variogram method is a comparatively poor estimator for all of the surfaces, particularly those with higher fractal dimensions. Similar to the fractal techniques, the spatial autocorrelation techniques are found to be useful to measure complex images but not images with low dimensionality. These fractal measurement methods can be applied directly to unclassified images and could serve as a tool for change detection and data mining.

Lam, Nina Siu-Ngan↗

NASA NTRS1989

The use of aircraft and satellite remote sensing of phytoplankton chlorophyll concentrations in case 2 estuarine waters of the Chesapeake Bay

Two projects using remote sensing of phytoplankton chlorophyll concentrations in the Chesapeake Bay estuary were proposed. The first project used aircraft remote sensing with a compact radiometer system developed at NASA's Goddard Space Flight Center (GSFC), the Ocean Data Acquisition System (ODAS). ODAS includes three radiometers at 460, 490, and 520 nm, an infrared temperature sensor (PRT-5), Loran-C for navigation, and a data acquisition system using a PC and mass storage device. This instrument package can be flown in light aircraft at relatively low expense, permitting regular and frequent flights. Sixteen flights with ODAS were completed using the Virginia Institute of Marine Science's De Havilland 'Beaver'. The goal was to increase spatial and temporal resolution in assaying phytoplankton pigment concentrations in the Chesapeake. At present, analysis is underway of flight data collected between March and July 1989. The second project focused on satellite data gathered with the Nimbus-7 Coastal Zone Color Scanner (CZSC) between late 1978 and mid 1986. The problem in using CZSC data for the Chesapeake Bay is that the optical characteristics of this (and many) coastal and estuarine waters are distinct from those of the open ocean for which algorithms for computing pigment concentrations were developed. The successful use of CZCS data for the estuary requires development of site-specific algorithms and analytical approaches. Of principal importance in developing site-specific procedures is the availability of in-situ data on pigment concentrations. A significant data set was acquired from EPA's Chesapeake Bay Program in Annapolis, Maryland, and clear satellite scenes are being analyzed for which same-day sea truth measurements of pigment were obtained. Both the University of Miami and GSFC Seapak systems are being used in this effort. The main finding to date is an expected one, i.e., the algorithms developed for oceanic waters are inadequate to compute pigment concentrations for the Case 2 waters of the Chesapeake Bay. One reason is the overestimation of aerosol radiances by assuming that water-leaving radiance in Band 4 of CZCS (670 nm) is zero, an assumption that is invalid for the Bay. This prompted any attempts to iterative procedures for estimating the proportion of the Band 4 radiance that is actually attributable to aerosol by estimating the water-leaving component using optical data. A cruise on the Chesapeake the week of 7 August 1989 was conducted to collect additional optical data necessary to this task.

Harding, Lawrence W., Jr.↗

NASA NTRS2007

Clouds in GEOS-5

The GEOS-5 atmospheric model is being developed as a weather-and-climate capable model. It must perform well in assimilation mode as well as in weather and climate simulations and forecasts and in coupled chemistry-climate simulations. In developing GEOS-5, attention has focused on the representation of moist processes. The moist physics package uses a single phase prognostic condensate and a prognostic cloud fraction. Two separate cloud types are distinguished by their source: "anvil" cloud originates in detraining convection, and large-scale cloud originates in a PDF-based condensation calculation. Ice and liquid phases for each cloud type are considered. Once created, condensate and fraction from the anvil and statistical cloud types experience the same loss processes: evaporation of condensate and fraction, auto-conversion of liquid or mixed phase condensate, sedimentation of frozen condensate, and accretion of condensate by falling precipitation. The convective parameterization scheme is the Relaxed Arakawa-Schubert, or RAS, scheme. Satellite data are used to evaluate the performance of the moist physics packages and help in their tuning. In addition, analysis of and comparisons to cloud-resolving models such as the Goddard Cumulus Ensemble model are used to help improve the PDFs used in the moist physics. The presentation will show some of our evaluations including precipitation diagnostics.

Bacmeister, Julio↗

NASA NTRS1991

One GHz digitizer for space based laser altimeter

This is the final report for the research and development of the one GHz digitizer for space based laser altimeter. A feasibility model was designed, built, and tested. Only partial testing of essential functions of the digitizer was completed. Hybrid technology was incorporated which allows analog storage (memory) of the digitally sampled data. The actual sampling rate is 62.5 MHz, but executed in 16 parallel channels, to provide an effective sampling rate of one GHz. The average power consumption of the one GHz digitizer is not more than 1.5 Watts. A one GHz oscillator is incorporated for timing purposes. This signal is also made available externally for system timing. A software package was also developed for internal use (controls, commands, etc.) and for data communication with the host computer. The digitizer is equipped with an onboard microprocessor for this purpose.

Staples, Edward J.↗

NASA NTRSDate not supplied

Batch Effect Correction Methods for NASA GeneLab Transcriptomic Datasets

RNA sequencing (RNA-seq) data from space biology experiments promise to yield invaluable insights into the effects of spaceflight on terrestrial biology. However, sample numbers from each study are low due to limited crew availability, hardware, and space. To increase statistical power, spaceflight RNA-seq datasets from different missions are often aggregated together. However, this can introduce technical variation or "batch effects", often due to differences in sample handling, sample processing, and sequencing platforms. Several computational methods have been developed to correct for technical batch effects, thereby reducing their impact on true biological signals. In this study, we combined 7 mouse liver RNA-seq datasets from NASA GeneLab (part of the NASA Open Science Data Repository) to evaluate several common batch effect correction methods (ComBat and ComBat-seq from the sva R package, and Median Polish, Empirical Bayes, and ANOVA from the MBatch R package). We quantitatively evaluated the ability of these methods to correct for technical batch variables in space biology RNA-seq data using the following criteria: BatchQC, principal component analysis, dispersion separability criterion, log fold change correlation, and differential gene expression analysis. Each batch variable / correction method combination was then assessed using a custom scoring approach to identify the optimal correction method for the combined dataset, by geometrically probing the space of all allowable scoring functions to yield an aggregate volume-based scoring measure. Finally, we describe the way in which the GeneLab multi-study analysis and visualization portal will allow users to examine the presence or absence of batch effects using multiple metrics. If the user chooses to perform batch effect correction, the scoring approach described here can be implemented to identify the optimal correction method to use for their specific combined dataset prior to analysis.

Lauren M. Sanders↗

NASA NTRS1974

Space shuttle/food system study. Volume 2, appendix E: Alternate flight systems analysis

The functional requirements of stowage, preparation, serving, consumption, and cleanup were applied to each of the five food mixes selected for study in terms of the overall design of the space shuttle food system. The analysis led to a definition of performance requirements for each food mix, along with a definition of equipment to meet those requirements. Weight and volume data for all five systems, in terms of food and packaging, support equipment, and galley installation penalties, are presented.

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NASA NTRS1974

A magnetic bubble domain flight recorder

A feasibility model of an all-electronic bubble memory system has been constructed. It uses a small 60k bit bubble recorder consisting of 6 chips of 10k bits each mounted in three separate packages operating as a FIFO at a 150 KHz bubble data rate. In addition to serving as a direct tape recorder replacement, the bubble recorder can be programmed for random access to each individual chip for ranom block access operation or for self-checking or by-passing any malfunctioning memory chip. Read and write operations can be performed asynchronously from very low frequency up to basic recording field frequency. A large 50M bit prototype is planned.

Chen, T. T.↗

NASA NTRS1975

Cosmic ray particle dosimetry and trajectory tracing

Five pocket mice (Perognathus longimembris) were flown on Apollo XVII, each with a solid-state (plastic) nuclear track detector implanted beneath its scalp. The subscalp detectors were sensitive to HZE cosmic ray particles with a LET greater than or approximately equal to 0.15 million electron volts per micrometer (MeV/micron). A critical aspect of the dosimetry of the experiment involved tracing individual particle trajectories through each mouse head from particle tracks registered in the individual subscalp detectors, thereby establishing a one-to-one correspondence between a trajectory location in the tissue and the presence or absence of a lesion. The other major aspect was the identification of each registered particle. An average of 16 particles with Z greater than or equal to 6 and 2.2 particles with Z greater than or equal to 20 were found per detector. The track density, 29 tracks/sq cm, when adjusted for detection volume, was in agreement with the photographic emulsion data from an area dosimeter located next to the flight package.

Cruty, M. R.↗

NASA NTRS1975

NASA Earth Resources Survey Symposium. Volume 1-B: Geology, Information Systems and Services

A symposium was conducted on the practical applications of earth resources survey technology including utilization and results of data from programs involving LANDSAT, the Skylab earth resources experiment package, and aircraft. Topics discussed include geological structure, landform surveys, energy and extractive resources, and information systems and services.

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NASA NTRS1975

Transfer research and impact studies program

Methods developed for stimulating interest in the transfer of NASA-originated technology are described. These include: new information packaging concepts; technology transfer via people transfer; information management systems; data bank operations; and professional communication activities.

Freeman, J. E.↗

NASA NTRS1975

Interactive image processing for meteorological applications at NASA/Goddard Space Flight Center

The meteorological data processing program at the space center is centered on the analysis of geostationary satellite data. Its objectives are to detect and predict severe storms, to improve short range and long range global numerical weather forecasting models, and to develop improved satellite systems. The Image Display and Manipulation System (IDAMS) for earth resources satellite data processing is described, as is the special purpose software package, METPAK, for performing meteorology operations on IDAMS. The Atmospheric and Oceanographic Information Processing System (AOIPS), a dual terminal multiprocessor is also described.

Billingsley, J. B.↗

NASA NTRS1979

Residential solar-heating system-design package

Design package for modular solar heating system includes performance specifications, design data, installation guidelines, and other information that should be valuable to those interested in system (or similar systems) for projected installation. When installed in insulated "energy saver" home, system can supply large percentage of total energy needs of building.

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