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DOE OSTI2022

De novo protein design of photochemical reaction centers

Abstract Natural photosynthetic protein complexes capture sunlight to power the energetic catalysis that supports life on Earth. Yet these natural protein structures carry an evolutionary legacy of complexity and fragility that encumbers protein reengineering efforts and obfuscates the underlying design rules for light-driven charge separation. De novo development of a simplified photosynthetic reaction center protein can clarify practical engineering principles needed to build new enzymes for efficient solar-to-fuel energy conversion. Here, we report the rational design, X-ray crystal structure, and electron transfer activity of a multi-cofactor protein that incorporates essential elements of photosynthetic reaction centers. This highly stable, modular artificial protein framework can be reconstituted in vitro with interchangeable redox centers for nanometer-scale photochemical charge separation. Transient absorption spectroscopy demonstrates Photosystem II-like tyrosine and metal cluster oxidation, and we measure charge separation lifetimes exceeding 100 ms, ideal for light-activated catalysis. This de novo-designed reaction center builds upon engineering guidelines established for charge separation in earlier synthetic photochemical triads and modified natural proteins, and it shows how synthetic biology may lead to a new generation of genetically encoded, light-powered catalysts for solar fuel production.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2022

Antimicrobial properties of a multi-component alloy

High traffic touch surfaces such as doorknobs, countertops, and handrails can be transmission points for the spread of pathogens, emphasizing the need to develop materials that actively self-sanitize. Metals are frequently used for these surfaces due to their durability, but many metals also possess antimicrobial properties which function through a variety of mechanisms. This work investigates metallic alloys comprised of several metals which individually possess antimicrobial properties, with the target of achieving broad-spectrum, rapid sanitation through synergistic activity. An entropy-motivated stabilization paradigm is proposed to prepare scalable alloys of copper, silver, nickel and cobalt. Using combinatorial sputtering, thin-film alloys were prepared on 100 mm wafers with ≈50% compositional grading of each element across the wafer. The films were then annealed and investigated for alloy stability. Antimicrobial activity testing was performed on both the as-grown alloys and the annealed films using four microorganisms—Phi6, MS2, Bacillus subtilis and Escherichia coli —as surrogates for human viral and bacterial pathogens. Testing showed that after 30 s of contact with some of the test alloys, Phi6, an enveloped, single-stranded RNA bacteriophage that serves as a SARS-CoV-2 surrogate, was reduced up to 6.9 orders of magnitude (> 99.9999%). Additionally, the non-enveloped, double-stranded DNA bacteriophage MS2, and the Gram-negative E. coli and Gram-positive B. subtilis bacterial strains showed a 5.0, 6.4, and 5.7 log reduction in activity after 30, 20 and 10 min, respectively. Antimicrobial activity in the alloy samples showed a strong dependence on the composition, with the log reduction scaling directly with the Cu content. Concentration of Cu by phase separation after annealing improved activity in some of the samples. The results motivate a variety of themes which can be leveraged to design ideal antimicrobial surfaces.

36 MATERIALS SCIENCE↗

DOE OSTI2020

Metal-ion-controlled growth and nanoindentation response of 3D, bicontinuous Cu–Fe thin films

Bicontinuous, nanocomposite thin film morphologies depend largely on the deposition conditions applied during physical vapor deposition. With the introduction of high power impulse magnetron sputtering (HiPIMS), the range of potential morphologies achieved during deposition has been increased. In this work, we compare the deposition outcomes between traditional direct-current magnetron sputtering (DCMS) and HiPIMS for a thin film co deposit of Cu and Fe. Modular control of the columnarity, porosity and roughness was achieved by varying the Cu and Fe metal ion currents during deposition. The directionality of the nanostructured phase-separated morphology was also controlled as the ion current increased. At zero ion current for both Cu and Fe sputtered species during DCMS, the film exhibited lateral concentration modulations of Cu and Fe. The directionality of the Cu- and Fe-rich phases shifted to vertical concentration modulations at low ion currents of I Fe = 1A and I Cu = 0:1A and to lateral concentration modulations at relatively moderate ion currents of I Fe = 5A and I Cu = 2A: At high ion currents of I Fe = 18A and I Cu = 2A; a more randomized phase domain structure was observed on the nanoscale. This structural shift is rationalized using an interdiffusion model. Here, the role of different kinds of phase separated morphologies, achieved during DCMS deposition, on the mechanical properties has also been studied. Results indicated increase in hardness, indentation modulus and flow strength values with the increase in indentation strain rates. Bicontinuous Cu-Fe nanocomposites are found to be stronger than multilayer Cu-Fe samples.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Multiferroic ground states in free standing perovskite-based nanodots: a density functional theory study

In this work, we use density functional theory to investigate the possibility of polar and multiferroic states in free-standing, perovskite-based nanodots at the atomic limit of miniaturization: single unit cells with terminations which allow centro-symmetry. We consider both A-O and B-O 2 terminations for three families of nanodots: (i) A = Ba with B = Ti, Zr, and Hf; (ii) A = Ca and Sr with B = Ti; and (iii) A = Na and K with B = Nb. We find all A–O terminated dots to be non-polar and to exhibit cubic symmetry (except for K 8 NbO 6 ), regardless of the presence of ferroelectricity in the bulk. In contrast, all the B–O 2 terminated nanodots considered relax to a non-cubic ground state. Rather surprisingly, all of these structures exhibit polar ground states (except NaNb 8 O 12 ). We propose a new structural parameter, the cluster tolerance factor (CTF), to determine whether a particular chemistry will result in a polar ground state nanodot, analogous to the Goldschmidt factor for bulk ferroelectrics. In addition, we find that all A–O terminated (except Ca 8 TiO 6 ) and all polar B–O 2 terminated nanodots are magnetic, where none show magnetism in the bulk. As with bulk systems, multiferroicity in the B–O 2 terminated dots originates from separation between spin density in peripheral B atoms and polarity primarily caused by the off-center central A atom. Our findings stress that surface termination plays a crucial role in determining whether ferroelectricity is completely suppressed in perovskite-based materials at their limit of miniaturization.

36 MATERIALS SCIENCE↗

DOE OSTI2025

Locality in collider tests of quantum mechanics with top quark pairs

Tests of quantum properties of fundamental particles in high energy colliders are starting to appear. Entanglement and Bell inequality violation in top and antitop quark system is of particular interest since top quarks are unstable particles that undergo a cascade decay. We argue for criteria for the spacelike separation between top and antitop quarks at their different decay stages. We considered causal separation at three different instances: at the top quark decay, at the 𝑊 boson decay, and at the lepton/jet contact with the macroscopic apparatus. We showed that the spacelike fraction of events is the smallest, when requiring that both top quarks and 𝑊 bosons decay within the spacelike interval. For high invariant masses, typically required for the Bell inequality violation, this is almost identical to just the top quark decay requirement. We also include an option for the angular correlation of the 𝑏 quarks from top quark decay to be used for the spin correlation measurement. We require that both top quark and 𝑏 hadron decays are spacelike separated. Again, we find that at high invariant masses it is almost identical to just the requirement of spacelike separation between top and antitop quarks. We provide numerical values for our proposed criteria. If such a criterion is satisfied, the system is guaranteed to not be in a causal connection.

Entanglement in field theory↗

DOE OSTI2021

CrI 3 revisited with a many-body ab initio theoretical approach

CrI 3 has recently been shown to exhibit low-dimensional, long-range magnetic ordering from few layers to single layers of CrI 3 . The properties of CrI 3 bulk and few layered systems are uniquely defined by a combination of short-range intralayer and long-range interlayer interactions; including strong correlations, exchange and spin orbit coupling. Unfortunately, both the long-range van der Waals interactions, which are driven by dynamic, many-body electronic correlations and the competing strong intralayer correlations, present a formidable challenging for the local or semi local mean-field approximations employed in workhorse electronic structure approaches like density functional theory. In this work, we employ a sophisticated many-body approach that can simultaneously describe long- and short-range correlations. Herein, we establish that the fixed-node diffusion Monte Carlo (FNDMC) method reproduces the experimental interlayer separation distance of bulk CrI 3 for the high-temperature, monoclinic phase, with a reliable prediction of the interlayer binding energy. We subsequently employed, the FNDMC results to benchmark the accuracy of several density functional theory exchange-correlation approximations.

36 MATERIALS SCIENCE↗

DOE OSTI2024

Mechanochemically accelerated deconstruction of chemically recyclable plastics

Plastics redesign for circularity has primarily focused on monomer chemistries enabling faster deconstruction rates concomitant with high monomer yields. Yet, during deconstruction, polymer chains interact with their reaction medium, which remains underexplored in polymer reactivity. Here, we show that, when plastics are deconstructed in reaction media that promote swelling, initial rates are accelerated by over sixfold beyond those in small-molecule analogs. This unexpected acceleration is primarily tied to mechanochemical activation of strained polymer chains; however, changes in the activity of water under polymer confinement and bond activation in solvent-separated ion pairs are also important. Together, deconstruction times can be shortened by seven times by codesigning plastics and their deconstruction processes.

36 MATERIALS SCIENCE↗

DOE OSTI2020

Separating Cloud and Drizzle Signals in Radar Doppler Spectra Using a Parametric Time Domain Method

The ability to separate cloud and drizzle returns in active remote sensing observations is important for understanding the microphysics of clouds and precipitation. Yet, robust separations remain challenging in radar remote sensing. Prior methods for cloud and drizzle separation for radar observations use the properties of the Doppler spectra such as skewness. However, these methods have challenges when the drizzle becomes dominant in the observation volume. This paper presents a parametric time domain method (PTDM) that separates cloud and drizzle using the Doppler spectra measurements without assuming any prior properties of cloud and drizzle. The advantage of PTDM is that it can estimate the signal properties in the time domain and can obtain the cloud and drizzle estimates simultaneously. Based on our radar signal simulations, the uncertainty in estimated power and velocity from PTDM are within 2 dB and 0.02 m s -1 , respectively. We have also evaluated the PTDM algorithm using observations from the Atmospheric Radiation Measurement (ARM) Program W-band cloud radar in the Clouds, Aerosols, and Precipitation in the Marine Boundary Layer (CAP-MBL) campaign at the Azores in 2009–10. Two cases corresponding to light and moderate drizzling conditions are considered for the study. The statistics of the estimates obtained show that the PTDM method performs well in separating the cloud and drizzle returns. Finally, the estimated cloud and drizzle reflectivity from PTDM were used to retrieve their corresponding microphysical properties, showing that the retrieved liquid water path agrees to 25 g m -2 with the benchmark microwave method.

Engineering↗

DOE OSTI2023

Data Remapping Between One-Dimensional Meshes

In this report, we describe two approaches to the problem of remapping data from a source mesh (on which data is available) onto a target mesh. We consider two separate methods to solve the problem: Pointwise and Conservative remap, and determine why one is more advantageous when considering different physics applications and elements. We utilize C++ functionalities to derive our findings along with the C++ ”Chronos” library for timing measurements of our studies.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2025

SPRUCE Air 13C and 14C Isotopes, Marcell Experimental Forest, Minnesota, 2016-2025

This data set reports 13C (carbon) and 14C signatures of air from Spruce and Peatland Responses Under Changing Environments (SPRUCE) experimental study plots located in the S1-Bog at the Marcell Experimental Forest in northern Minnesota from 2016-2025 (2016-04-13 to 2025-09-24). Air measurements were collected approximately five times throughout each active growing season beginning in 2016 and included the 10 SPRUCE experimental plots (Plots 4, 6, 8, 10, 11, 13, 16, 17, 19, and 20) two ambient co-located ambient plots (Plots 7 and 21) and a site at the Marcell Experiment Station’s S2-Bog meteorological station (MET) located 1.7 km northeast of the SPRUCE experimental site on the S1-Bog. Air samples were assessed for both 13C- and 14C-CO2 (carbon-carbon dioxide) signatures. 13C and 14C isotopic signatures can be used in end-member analysis and C-cycle models to track the movement of C within the experimental ecosystem, calculate turnover times within plant tissues, and to test mechanisms used in models. This dataset contains one data file in comma separate (*.csv) format. Additional metadata are provided: one data dictionary and a file-level metadata file in comma separate (*.csv) format and a user guide in PDF (*.pdf) format.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2025

TEM Characterization of Nanostructured Grade 91 Neutron Irradiated to 6 DPA at 300 °C and 500 °C

Previously, samples of coarse grained (CG, grain diameter > 1 µm), ultra-fine grained (UFG, 1 µm> grain diameter> 100 nm), and nanocrystalline (NC, 100 nm> grain diameter) grade 91 steel were neutron irradiated in the Advanced Test Reactor (ATR) at Idaho National Laboratory (INL). Grade 91 is a ferritic/martensitic steel alloy with a nominal composition of Fe-9%Cr-1%Mo by weight, and it is being studied for applications in advanced nuclear reactor designs including as a fuel cladding material in gas cooled reactors. To assess the viability of this alloy for nuclear applications, the role of grain boundary size has not been sufficiently explored as a mechanism for developing radiation-tolerant materials. To achieve an UFG microstructure the material was processed using equal channel angular pressing (ECAP), and the NC microstructure was achieved through high pressure torsion (HPT). Such samples of various geometries for different types of characterization were irradiated to a dose of 6 displacements per atom (DPA) at separate temperature conditions of 300 °C and 500 °C. Thus, there were a total of 6 experimental conditions, three grain sizes (CG, UFG, and NC), each irradiated at two different temperature conditions (300 °C and 500 °C).

36 - MATERIALS SCIENCE↗

DOE OSTI2020

Irradiation and PIE of alloys X-750 and XM-19 (EPRI Phase III)

The Nuclear Science User Facilities (NSUF) based at Idaho National Laboratory (INL), along with the Electric Power Research Institute (EPRI), formed an agreement to test representative alloys used as reactor structural materials as a pilot program to establish guidelines for future NSUF research programs. This report contains results from the portion of this program established as Phase III (of three phases), entailing irradiation and post-irradiation examination of select alloys typical of boiling water reactor (BWR) internal structural materials. Phases I and II are the subject of separate reports and represent baseline material test results and irradiation experiment design, respectively. The intent of this Phase III research program is to determine properties for the materials of interest after being irradiated at the Advanced Test Reactor (ATR) to three different target fast (E>1MeV) fluences: 5.0 x 10¹⁹ n/cm², 2.0 x 10²⁰ n/cm², and 1.0 x 10²¹ n/cm². These correspond to irradiation damage levels (displacements per atom [dpa]) of approximately 0.08, 0.30, and 1.4 dpa, which represent comparable levels to (a) a previous study which looked at X-750 irradiated to ~1 x 10¹⁹ n/cm², comparable to the lowest fluence; (b) approximately a medium level of fluence for BWR components; and (c) extended life (60 – 80 years) for BWR components. The materials chosen for this research are the nickel-based alloy X-750 and austenitic stainless steel XM-19. A spare core shroud upper support bracket of alloy X-750 was purchased by EPRI from Southern Co., and a section of XM-19 plate was purchased by EPRI from GE-Hitachi. These materials were sectioned at GE Global Research Center (GE-GRC), and parts were provided to INL for use in this pilot project.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2020

Irradiation and PIE of alloys X-750 and XM-19 (EPRI Phase III)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2020

Visible-Light-Activated Photocatalytic Films toward Self-Cleaning Membranes

Membranes are among the most promising means of delivering increased supplies of fit-for-purpose water, but membrane fouling remains a critical issue restricting their widespread application. Coupling photocatalysis with membrane separation has been proposed as a potentially effective approach to reduce membrane fouling. However, commonly used materials in photocatalysis limit use of low-cost sources such as sunlight due to their large band gaps. There are few examples of in situ photocatalytic self-cleaning of membranes, with removal from the filtration system and ex situ illumination being more common. In this study, a visible-light-activated photocatalytic film prepared by nitrogen doping into the lattice of TiO 2 was deposited on commercial ceramic membranes via atomic layer deposition (ALD). The synergy between membrane separation and redox reactions between organic pollutants and reactive oxygen species (ROS) produced by the visible-light-activated layer offers a possibility for stable and sustainable membrane operation under in situ solar irradiation.

36 MATERIALS SCIENCE↗

DOE OSTI2025

Self‐Assembled Membranes for High Ion Selectivity and Proton Blocking in Electrochemical Applications

Anion-exchange membranes (AEMs) with high anion/cation selectivity and exceptional proton-blocking ability are critical for applications such as bipolar membrane electrodialysis and electrochemical acid recovery. However, existing AEMs are constrained by a trade-off between ionic conductivity and selectivity, largely due to the intrinsic coupling between charge density and water content, and they suffer from excessive proton leakage facilitated by the Grotthuss hopping mechanism. In this work, poly(vinylimidazolium) membranes functionalized with long alkyl side chains that self-assemble into well-defined microphase-separated morphologies stabilized by hydrophobic and electrostatic interactions are reported. These unique structures localize the charge density along the polymer backbone to promote fast and selective ion transport. As a result, these membranes exhibit ionic conductivities and counter-ion diffusivities surpassing those of conventional homogeneous membranes, along with unprecedented counter-ion/co-ion selectivity and proton-blocking ability. These results establish a new design paradigm for high-performance, phase separated charged polymer membranes that overcome the limitations of homogeneous membranes, with broad implications for advanced electrochemical technologies.

36 MATERIALS SCIENCE↗

DOE OSTI2023

A new climatology of South American extratropical cyclogenesis with an intercomparison among ERA5 , JRA55 and the Brazilian Navy

Abstract In South America, the most destructive extratropical cyclones occur over the southeastern quadrant of the continent, a region that includes some of the world's largest population centres. However, there are few studies of cyclogenesis in this region, and little is known about how the varying origins of these storms impact subsequent behaviour. By supplementing an observational record with current reanalysis data, this study reveals the general characteristics of cyclones that develop in the lee regions of the Andes and those that develop nearer the Atlantic coast. The comparative climatologies demonstrate that cyclone development in these separate contexts is driven by topography, local atmospheric circulations and basin‐scale climate oscillations. The analysis further reveals a low‐frequency seesaw of lee and coastal cyclogenesis, with cross‐basin ocean temperature differences playing a teleconnectional role.

Meteorology & Atmospheric Sciences↗

DOE OSTI2023

Glassy correlated state induced by disorder in the frustrated antiferromagnet Tb 2 Zr 2 O 7

Here, we study the low-temperature thermomagnetic properties of the polycrystalline material Tb 2 Zr 2 O 7 through ac susceptibility and specific heat measurements. This zirconate displays a defect-fluorite structure in which the magnetic Tb 3+ and nonmagnetic Zr 4+ cations sit randomly on the same metal sublattice. No long-range magnetic order is found down to 100 mK, although dominant antiferromagnetic interactions are observed and the spins remain dynamic down to the lowest temperatures investigated. We observed a frequency-dependent peak around 2.5 K which is well described by many models of a canonical spin-glass transition. In-field specific heat measurements and the recovered entropy of the system R ln(4) suggest a two doublets ground state separated by 7 K. Comparisons to the pyrochlores Tb 2 Ti 2 O 7 and Tb 2 Hf 2 O 7 reinforce the collective spin-glass-type behavior and the opening for discussions of an exotic Coulomb phase in this material.

36 MATERIALS SCIENCE↗

DOE OSTI2021

A study on the creep behavior of alloy 709 using in-situ scanning electron microscopy

In this research, an experimental evaluation of creep properties of Alloy 709 in the temperature range of 750–850 °C was undertaken. Alloy 709 is a novel austenitic stainless steel with 20% Cr and 25% Ni by wt% that was developed for application in structural components of nuclear power plants. Creep rupture tests were conducted in an in-situ heating-loading and Scanning Electron Microscope (SEM) unit equipped with Electron Backscatter Diffraction (EBSD) detector and Energy Dispersive Spectroscopy (EDS). “Real-time” creep damage mechanisms of Alloy 709 at various stresses and temperatures using a flat, un-notched sample with continuously reducing cross-section is studied so that the failure and maximum creep damage occurred at the center of the sample where the in-situ SEM imaging could be focused. Accelerated creep tests at temperatures and stresses above service conditions were performed by employing multiple blocks of constant loads where the loads were increased once the sample attained constant creep rate, indicating a secondary creep regime. This technique ensures multiple data points can be obtained from the same test, saves the time required for an otherwise long-term creep test and usage of SEM. Further, Coincident Site Lattice (CSL) boundary maps were collected as control maps before testing, and the grain boundaries were observed during the creep test to understand the effect of grain boundary character on the creep damage mechanism. Void growth, grain boundary separation, and sliding were found to be the main creep mechanisms whose rate is dependent on stress and temperature. Failure mechanisms studied on the fracture surface using SEM fractography were correlated to the sample surface observations to create complementary information to better understand the underline creep mechanism of Alloy 709.

36 MATERIALS SCIENCE↗