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At least 1,135 records · Page 63

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DOE OSTI2020

Demonstration of a 2 ps, 5 TW peak power, long-wave infrared laser based on chirped-pulse amplification with mixed-isotope CO 2 amplifiers 2 amplifiers

We report generation of 5 TW peak power in a 2 ps pulse at 9.2 µm via chirped-pulse amplification (CPA) in mixed-isotope high-pressure CO 2 laser amplifiers. This represents the highest peak power in a single picosecond pulse format and the shortest pulse at terawatt peak power ever achieved in the long-wave infrared (LWIR) spectral range. Maximum demonstrated energy of the compressed pulse is 14 J and minimum period between shots is 20 s. The successful implementation of the chirped pulse amplification technique in a short-pulse gas laser opens a route to development of LWIR laser facilities with tens of terawatts of peak power, thus approaching the number of photons per optical cycle of current near-infrared laser systems based on solid-state active media.

43 PARTICLE ACCELERATORS↗

DOE OSTI2024

Bayesian inference of structured latent spaces from neural population activity with the orthogonal stochastic linear mixing model

The brain produces diverse functions, from perceiving sounds to producing arm reaches, through the collective activity of populations of many neurons. Determining if and how the features of these exogenous variables (e.g., sound frequency, reach angle) are reflected in population neural activity is important for understanding how the brain operates. Often, high-dimensional neural population activity is confined to low-dimensional latent spaces. However, many current methods fail to extract latent spaces that are clearly structured by exogenous variables. This has contributed to a debate about whether or not brains should be thought of as dynamical systems or representational systems. Here, we developed a new latent process Bayesian regression framework, the orthogonal stochastic linear mixing model (OSLMM) which introduces an orthogonality constraint amongst time-varying mixture coefficients, and provide Markov chain Monte Carlo inference procedures. We demonstrate superior performance of OSLMM on latent trajectory recovery in synthetic experiments and show superior computational efficiency and prediction performance on several real-world benchmark data sets. We primarily focus on demonstrating the utility of OSLMM in two neural data sets: μ ECoG recordings from rat auditory cortex during presentation of pure tones and multi-single unit recordings form monkey motor cortex during complex arm reaching. We show that OSLMM achieves superior or comparable predictive accuracy of neural data and decoding of external variables (e.g., reach velocity). Most importantly, in both experimental contexts, we demonstrate that OSLMM latent trajectories directly reflect features of the sounds and reaches, demonstrating that neural dynamics are structured by neural representations. Together, these results demonstrate that OSLMM will be useful for the analysis of diverse, large-scale biological time-series datasets.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2025

HighDimMixedModels.jl: Robust high-dimensional mixed-effects models across omics data

High-dimensional mixed-effects models are an increasingly important form of regression in which the number of covariates rivals or exceeds the number of samples, which are collected in groups or clusters. The penalized likelihood approach to fitting these models relies on a coordinate descent algorithm that lacks guarantees of convergence to a global optimum. Here, we empirically study the behavior of this algorithm on simulated and real examples of three types of data that are common in modern biology: transcriptome, genome-wide association, and microbiome data. Our simulations provide new insights into the algorithm’s behavior in these settings, and, comparing the performance of two popular penalties, we demonstrate that the smoothly clipped absolute deviation (SCAD) penalty consistently outperforms the least absolute shrinkage and selection operator (LASSO) penalty in terms of both variable selection and estimation accuracy across omics data. To empower researchers in biology and other fields to fit models with the SCAD penalty, we implement the algorithm in a Julia package, HighDimMixedModels.jl .

Gorstein, Evan↗

DOE OSTI2020

Isoflavone supplementation, via red clover hay, alters the rumen microbial community and promotes weight gain of steers grazing mixed grass pastures

Biochanin A, an isoflavone present in the pasture legume red clover (Trifloium pratense L.), alters fermentation in the rumen of cattle and other ruminants. Biochanin A inhibits hyperammonia-producing bacteria and promotes cellulolytic bacteria and fiber catalysis in vitro and ex vivo. Consequently, biochanin A supplementation improves weight gain in grazing steers. Red clover contains biologically active isoflavones that may act synergistically. Therefore, the objective was to evaluate the effect of two levels of red clover hay on growth performance and the microbial community in growing steers grazing mixed grass pastures. A grazing experiment was conducted over 2 early growing seasons (2016 and 2017) with 36 cross-bred steers and twelve rumen-fistulated, growing Holstein steers for evaluation of average daily gain and rumen microbiota, respectively. Steers were blocked by body weight and assigned to pastures with one of four treatments: 1) pasture only, 2) pasture + dry distillers’ grains (DDG), 3) pasture + DDG + low level of red clover hay (~15% red clover diet), or 4) pasture + DDG + high level of red clover hay (~30% red clover diet). DDG were added to treatments to meet protein requirements and to balance total protein supplementation between treatments. All supplementation strategies (DDG ± red clover hay) increased average daily gains in comparison to pasture-only controls (P < 0.05), with a low level of red clover supplementation being the most effective (+0.17 kg d-1 > DDG only controls; P < 0.05). Similarly, hyper-ammonia-producing bacteria inhibition (10–100-fold; P < 0.05), fiber catalysis (+10–25%; P < 0.05) and short chain fatty acid concentrations were greatest with the low red clover supplement (+~25%; P < 0.05). These results provide evidence that lower levels or red clover supplementation may be optimal for maximizing overall microbial community function and animal performance in grazing steers.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

Mono-mix strategy enables comparative proteomics of a cross-kingdom microbial symbiosis

Cross-kingdom microbial symbioses, such as those between algae and bacteria, are key players in biogeochemical cycles. The molecular changes during initiation and establishment of symbiosis are of great interest, but quantitatively monitoring such changes can be challenging, particularly when the microorganisms differ greatly in size or are intimately associated. Here, we analyze output from label-free, data-dependent acquisition (DDA) LC-MS/MS proteomics experiments investigating the well-studied interaction between the alga Chlamydomonas reinhardtii and the heterotrophic bacterium Mesorhizobium japonicum. We found that detection of bacterial proteins decreased in coculture by 50% proteome-wide due to the abundance of algal proteins. As a result, standard differential expression analysis led to numerous false-positive reports of significantly downregulated proteins, where it was not possible to distinguish meaningful biological responses to symbiosis from artifacts of the reduced protein detection in coculture relative to monoculture. We show that data normalization alone does not eliminate the impact of altered detection on differential expression analysis of the cross-kingdom symbiosis. We assessed two additional strategies to overcome this methodological artifact inherent to DDA proteomics. In the first, we combined algal and bacterial monocultures at a relative abundance that mimicked the coculture, creating a “mono-mix” control to which the coculture could be compared. This approach enabled comparable detection of bacterial proteins in the coculture and the monoculture control. In the second strategy, we enhanced detection of lowly abundant bacterial proteins by using sample fractionation upstream of LC-MS/MS analysis. When these simple approaches were combined, they allowed for meaningful comparisons of nearly 10,000 algal proteins and over 4,000 bacterial proteins in response to symbiosis by DDA. They successfully recovered expected changes in the bacterial proteome in response to algal coculture, including upregulation of sugar-binding proteins and transporters. They also revealed novel proteomic responses to coculture that guide hypotheses about algal-bacterial interactions.

Dupuis, Sunnyjoy [University of California, Berkel↗

DOE OSTI2021

Minimizing Energy Use of Mixed-Fleet Public Transit for Fixed-Route Service

Affordable public transit services are crucial for communities since they enable residents to access employment, education, and other services. Unfortunately, transit services that provide wide coverage tend to suffer from relatively low utilization, which results in high fuel usage per passenger per mile, leading to high operating costs and environmental impact. Electric vehicles (EVs) can reduce energy costs and environmental impact, but most public transit agencies have to employ them in combination with conventional, internal-combustion engine vehicles due to the high upfront costs of EVs. To make the best use of such a mixed fleet of vehicles, transit agencies need to optimize route assignments and charging schedules, which presents a challenging problem for large transit networks. We introduce a novel problem formulation to minimize fuel and electricity use by assigning vehicles to transit trips and scheduling them for charging, while serving an existing fixed-route transit schedule. We present an integer program for optimal assignment and scheduling, and we propose polynomial-time heuristic and meta-heuristic algorithms for larger networks. We evaluate our algorithms on the public transit service of Chattanooga, TN using operational data collected from transit vehicles. Our results show that the proposed algorithms are scalable and can reduce energy use and, hence, environmental impact and operational costs. For Chattanooga, the proposed algorithms can save $145,635 in energy costs and 576.7 metric tons of CO 2 emission annually.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2021

A Mixed-Method Design Approach for Empirically Based Selection of Unbiased Data Annotators

Implicit bias embedded in the annotated data is by far the greatest impediment in the effectual use of supervised machine learning models in tasks involving race, ethics, and geopolitical polarization. For societal good and demonstrable positive impact on wider society, it is paramount to carefully select data annotators and rigorously validate the annotation process. Current approaches to selecting annotators are not sufficiently grounded in scientific principles and are limited at the policy-guidance level, thereby rendering them unusable for machine learning practitioners. This work proposes a new approach based on the mixed-methods design that is functional, adaptable, and simpler to implement in selecting unbiased annotators for any machine learning problem. By demonstrating it on a real-world geopolitical problem, we also identified and ranked key inane profile characteristics towards an empirically-based selection of unbiased data annotators.

Thakur, Gautam Malviya↗

DOE OSTI2022

Bootstrapping Mixed MN Correlators in 3D

The recent emergence of the modern conformal bootstrap method for the study of conformal field theories (CFTs) has enabled the revisiting of old problems in classical critical phenomena described by three-dimensional CFTs. The study of such CFTs with O(m)^n \rtimes S_n O ( m ) n ⋊ S n global symmetry, also known as models, is pursued in this work. Systems of mixed correlators involving scalar operators in two different representations of the global symmetry group are considered. Isolated allowed regions are found in parameter space for various values of m m and n n . These ``islands’’ can be separated into two qualitative groups: those close to the unitarity bound and those further away. As a by-product of our analysis generic tensor structures required to bootstrap any G^n \rtimes S_n G n ⋊ S n theory with G G arbitrary are worked out.

Kousvos, Stefanos Robert↗

DOE OSTI2020

Mixed-Material Scintillators (MMSS Quarterly Report FY20Q2)

This project aims to invent, model, and prototype mixed-material scintillator systems (MMSSs), a new class of radiation detectors that use heterogenous internal structures of different scintillating materials to detect additional properties of radiation. These internal structures can be produced using additive manufacture (3D printing) of scintillator, a currently emerging application of additive manufacture technology. MMSSs combine the low cost and complexity of conventional scintillation detectors with capabilities currently only available in more expensive and complex detectors. By identifying promising MMSS designs, this project will enable a new class of detectors to meet DNN’s mission needs for SNM detection. This quarter, we delivered one the MMSS Particle-ID Modeling report, a major deliverable of this project. This report describes our results on simulations of the particle-ID (PID) class of detectors. We found that these detectors outperform competing approaches for neutron-gamma discrimination, neutron source pointing, and neutron spectroscopy. Further highlights of the report are described below. During this quarter, We alerted HQ to a change in schedule for the remaining simulations planned for this project: we plan to put off further simulation and reporting of the position-resolving (PR) detector class until July. This change in schedule has allowed us to go into additional detail in the PID work that is both very promising and motivates our upcoming proposal. The other active task in this project is prototyping 3D-printed scintillators with the aim of realizing the designs we’ve simulated. On that front, we had three focuses: measuring the light output, increasing the size of printed parts, and combining blue and green scintillators. We succeeded in measuring the light output, showing an output of 30% of commercial standard. This result leaves room for improvement but is within striking distance of where we need to be. We were on track to demonstrate a key requirement for increasing the size of parts and also to show combined green/blue prints before the laboratory moved to a Minimum Safe (MinSafe) Operations posture as a result of local Shelter In Place orders due to Covid-19.

42 ENGINEERING↗

DOE OSTI2020

Mixed Material Scintillator Systems Particle ID Modelling Report

AMixed-Material Scintillator System (MMSS) is a radiation detector using a scintillator made of a heterogeneous, structured mixture of two or more materials. MMSSs are designed so that the structured mixing of materials encodes properties of the radiation detected in the scintillator. This allows for new radiation detectors with advantages over detectors using traditional homogeneous scintillators. This report contains results from this project’s second task, to model and quantify the promise of the MMSSs invented earlier in the project. Those inventions have been divided into two categories, and this report focuses on the first category: MMSS inventions the use zones of differently-colored scintillators to detect and characterize neutron sources. We call this category particle-ID, or PID, detectors. Inventions using gradients designed to encode the position of radiation interactions using gradients will be discussed in a future report.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2020

Mixed Material Scintillator Systems (Quarterly Report FY20Q3)

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2020

Advanced Mixing Condensation Particle Counter (aMCPC) Instrument Handbook

The U.S. Department of Energy Atmospheric Radiation Measurement (ARM) user facility’s aerosol counting, composition, extinction, and sizing system (ACCESS) includes a base module (9400), a filter sampler (9401), an advanced mixing condensation particle counter (aMCPC, 9403), a miniaturized optical practical counter (MOPC, 9405), and a single-channel tricolor absorption photometer (STAP, 9406). This handbook focuses on the aMCPC, which measures the ultra-fast total aerosol particle number concentration at 180 ms response rate with a detection diameter (D 50 = 7 nm).

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Preliminary Theoretical Analysis of Mixed Precision Krylov Subspace Methods (Q3 Report)

The third quarter of the project was spent performing theoretical finite precision analysis of Krylov subspace method variants that use mixed precision. Our focus here is on the Conjugate Gradient (CG) method and the Lanczos method. We have performed an analysis of maximum attainable accuracy for the classical CG method in which 3 precisions are used: a working precision ε, a precision ε IP for the inner product computations, and a precision ε MV for the matrix-vector products. Our results show that performing inner product computations in lower precision does not affect the attainable accuracy. Further, we have performed a complete error analysis of the s-step Lanczos algorithm. In this case, we show that the numerical behavior of the algorithm can be significantly improved by using extra precision in a small part of the computation. We summarize the main theorems in the remainder of the document. Other activities include attending biweekly xSDK meetings. The subsequent quarter will be spent finalizing these results into technical reports and/or manuscripts for submission to journals, as well as identifying opportunities for future work.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2020

White Paper to Justify the Use of Strip Effluent in the Defense Waste Processing Facility During Slurry Mix Evaporator Processing

At the request of Savannah River Remediation (SRR), a white paper was written to assess whether it would be acceptable to process Strip Effluent (SE) in both the Sludge Receipt and Adjustment Tank (SRAT) and Slurry Mix Evaporator (SME) in the Defense Waste Processing Facility (DWPF) for the nitric-glycolic acid flowsheet. Savannah River National Laboratory (SRNL) experimental data and DWPF Sludge Batch 9 (SB9) process data was reviewed, looking at batches which included Precipitate Reactor Feed Tank (PRFT) and/or Strip Effluent Feed Tank (SEFT) feeds that led to long processing times. These batches were reviewed looking for processing problems such as melter feed trips, foamovers, heating rod or steam coil fouling, missed Reduction/Oxidation (REDOX) targets, and other process anomalies.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2020

Mixed-dimensional stackable electronics enabled by freestanding 2D/3D materials

2D material-based devices have received great deal of attention as they can be easily stacked to obtain multifunctionality. With their ultrathin thicknesses, such multifunctioning devices become so flexible and conformal that they can be placed onto any 3D featured surfaces. However, 2D heterostructures are typically demonstrated as stacked flakes where single or few devices can be fabricated due to lack of strategies for layer-by-layer stacking of 2D materials at the wafer scale. In this talk, I will discuss about our unique strategy to isolate wafer-scale 2D materials into monolayers and stack them into a heterostructures by using a layer-resolved splitting (LRS) technique. This technique enables my group at MIT to explore unprecedented wafer-scale 2D heterodevices including integrated photonics, 3D neuromorphic computing, and microLEDs, which will be introduced in my talk. While 2D heterostructures promise interesting futuristic devices, the performance of 2D material-based devices is substantially inferior to that of conventional 3D semiconductor materials. However, 3D materials exist as their bulk form, thus it is challenging to stack them together for heterostructures. Obviously, conformal coating of such single-crystalline bulks on 3D features is impossible. My group at MIT has recently invented a 2D materials-based layer transfer (2DLT) technique that can produce single-crystalline freestanding membranes from any compound materials with their excellent semiconducting performance. This technique is based on remote epitaxy of single-crystalline films on graphene followed by peeling from graphene. Stacking of freestanding 3D material membranes will enable unprecedented 3D heterostructures whose performance is expected to be superior to that of 2D heterostructures. I will talk about our group’s effort to apply single-crystalline freestanding membranes for flexible, conformal electronics as well as for 3D heterostructures. Finally, I will conclude my talk by discussing perspectives of coupling 2D-3D freestanding membranes for 2D-3D mixed heterostructured devices that can be enabled by our LRS and 2DLT techniques.

Kim, Jeehwan↗

DOE OSTI2021

Parallel Solver Framework for Mixed-Integer PDE-Constrained Optimization

ROL-PEBBL is a C++, MPI-based parallel code for mixed-integer PDE-constrained optimization (MIPDECO). In these problems we wish to optimize (control, design, etc.) physical systems, which must obey the laws of physics, when some of the decision variables must take integer values. ROL-PEBBL combines a code to efficiently search over integer choices (PEBBL = Parallel Enumeration Branch-and-Bound Library) and a code for efficient nonlinear optimization, including PDE-constrained optimization (ROL = Rapid Optimization Library). In this report, we summarize the design of ROL-PEBBL and initial applications/results. For an artificial source-inversion problem, finding sources of pollution on a grid from sparse samples, ROL-PEBBLs solution for the nest grid gave the best optimization guarantee for any general solver that gives both a solution and a quality guarantee.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2020

Mixed Material Scintillator Systems Quarterly Report FY20Q4

This project aims to invent, model, and prototype architected multimaterial scintillator systems (AMSSs), a new class of radiation detectors that use heterogenous internal structures of different scintillating materials to detect additional properties of radiation. These internal structures can be produced using additive manufacture (AM, i.e. 3D printing) of scintillator, a currently emerging application of additive manufacture technology. AMSSs combine the low cost and complexity of conventional scintillation detectors with capabilities currently only available in more expensive and complex detectors. By identifying promising AMSS designs, this project will enable a new class of detectors to meet DNN’s mission needs for SNM detection. In past reporting, we have described this detector concept as “mixed material scintillator systems” (MMSS), but as part of preparing papers for publication we have concluded the term “architected multimaterial scintillator systems” (AMSS) better reflects the importance of structure in these detectors. We plan to use the AMSS acronym going forward. This quarter, we participated in an Independent Assessment of the work so far. The panelists on the review concluded that the AMSS concept has great potential and our work so far was effective at bringing that potential to light. They highly encouraged further work on this topic. The panelists also had several useful suggestions, which we took to heart. This review is described in more detail below. This quarter saw a resumption of work on the final task of this project, prototyping. In the first half of the quarter, this work focused on solving specific technical barriers to achieve 1x1x1 cm prints. In the second half, we focused on producing high-quality samples and making characterization measurements of those samples, with an eye on our deliverable report on the prototyping task. This report can be expected along with the end-of-year report on October 30. This project successfully spent the entirety of its remaining funds this quarter, except for $13k refunded to this project in the last days of the fiscal year due to LLNL cost adjustments. This project has captured the interest of many LLNL experts, and so we have been able to effectively use our budget to harness the available effort.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2021

Heavy-Duty Mixed-Controlled Compression Ignition: Fuel Effects and Ducted Fuel Injection.

This project is focused on developing advanced combustion strategies for mixing-controlled compression ignition (MCCI, i.e., diesel-cycle) engines that are synergistic with renewable and/or unconventional fuels in a manner that enhances domestic energy security, economic competitiveness, and environmental quality. During this reporting period, the two focus areas were ducted fuel injection (DFI) and surrogate diesel fuels.

33 ADVANCED PROPULSION SYSTEMS↗