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At least 1,135 records · Page 63

Analysis of substrate and plant spectral features of semi-arid shrub communities in the Owens Valley, California

Airborne Imaging Spectrometer (AIS) data were analyzed to deduce plant density and species composition in three semi-arid shrub-dominated communities of Owens Valley, CA, occurring on either a sand, granite alluvium, or basalt substrate. The high-spectral resolution AIS data were related to spectra obtained with field portable spectrometers, which in turn were related to plant and soil characteristics of the communities. Many of the dominant species have unique spectral features which permit their identification in AIS pixel images. The canopy-induced shadow may be a major factor influencing substrate spectral properties during fall and winter, because of low sun angles. Moreover, changes in spectral signatures following dormancy and leaf senescence tend to decrease contrasts between the plant community and the geologic substrate, also suggesting that fall and winter are a difficult time of year for spectral analyses.

Ustin, S. L.↗

A multispectral study of an extratropical cyclone with Nimbus 3 medium resolution infrared radiometer data

Four registered channels (0.2 to 4, 6.5 to 7, 10 to 11, and 20 to 23 microns) of the Nimbus 3 Medium Resolution Infrared Radiometer (MRIR) were used to study 24-hr changes in the structure of an extratropical cyclone during a 6-day period in May 1969. Use of a stereographic-horizon map projection insured that the storm was mapped with a single perspective throughout the series and allowed the convenient preparation of 24-hr difference maps of the infrared radiation fields. Single-channel and multispectral analysis techniques were employed to establish the positions and vertical slopes of jetstreams, large cloud systems, and major features of middle and upper tropospheric circulation. Use of these techniques plus the difference maps and continuity of observation allowed the early detection of secondary cyclones developing within the circulation of the primary cyclone. An automated, multispectral cloud-type identification technique was developed, and comparisons that were made with conventional ship reports and with high-resolution visual data from the image dissector camera system showed good agreement.

Holub, R.↗

A Performant, Scalable Processing Pipeline for High‐Quality and FAIR Environmental Sensor Data

High-resolution environmental monitoring is necessary to record, understand, and predict biogeochemical and ecological changes particularly in coastal systems but brings significant challenges in processing and making rapidly available the resulting data. The COMPASS-FME project established a network of coastal observational sites across the Chesapeake Bay and western Lake Erie regions extensively instrumented with soil, vegetation, and weather sensors logging data every 15 min. Our data processing framework, written in R and completely open source, prioritizes rapid model-experiment iteration and makes biogeochemical data rapidly available for quality assurance/quality control, analysis, and model ingestion. This pipeline is distinguished by a standardized and modular approach to data curation, extensive metadata and documentation, and its high performance. These attributes combine to make biogeochemical data rapidly accessible across COMPASS-FME and the broader community. Flexible, powerful, and reproducible approaches to handling high-volume environmental data are crucial for accelerating biogeosciences research.

Pennington, Stephanie C. [Pacific Northwest Nation↗

SWIPE: Spectral Water Inversion Processor and Emulator

Degradation of Earth’s inland water resources due to anthropogenic perturbations and climate anomalies at both local and global scales continues to place human health at substantial risk. There is now a growing necessity to develop pragmatic approaches that allow timely and effective extrapolation of local processes, to spatially resolved global products, and to promote operational and sustainable resource policy management. This presentation will be discussing the progress made developing SWIPE: Spectral Water Inversion Processor and Emulator. SWIPE is a platform for advanced modeling of coastal and inland aquatic habitats. The goal is create a comprehensive and cohesive system to leverage recent advancements in computation and machine learning to develop a synthetic training ground for sensitivity studies and algorithm development. The four principal facets of SWIPE include: 1. Advanced two-layer coated sphere bio-optical modeling and GPU radiative transfer modeling, 2. Big Data involving massive synthetic spectral libraries of optical properties of various global aquatic particles, surface reflectance, and top-of-atmosphere reflectance, all at hyperspectral resolution leveraging high-end computing systems at NASA Ames Research Center, 3. Deep Learning for algorithm development for water quality inversion of concentrations of common biogeophysical variables as well as optics, full uncertainty characterization by water type, and forward emulation, and lastly, 4. Image Processing for application of developed retrieval algorithms for both hyperspectral and multispectral sensors with experimental corrections for global adjacency, noise, sunglint, and benthic reflectance. This presentation will demonstrate the Equivalent Algal Populations (EAP) two-layer coated sphere scattering model which has been used develop spectral libraries of hyperspectral inherent optical properties of roughly 80 species of phytoplankton, covering 15 different classes and nine taxonomic functional types. The EAP model was also used to derive spectral properties of 10 different non-algal particle functional types. Examples of how the SMART-G (Speed-up Monte-carlo Advanced Radiative Transfer using GPU) radiative transfer code is used to model optically complex aquatic signals will be presented and discussed in the context of creating a massive synthetic database which can leverage the full power of next generation machine learning techniques and high end computing for water quality inversion. We will discuss our active investigation in things like appropriate model architectures, dimensionality reduction techniques such as PCA and autoencoders, uncertainty quantification and abstaining, and which variables actually benefit most from hyperspectral information versus multispectral resolution. We are also curious about questions relating to cost/benefit analysis in terms of computation resources, neural network complexity, and data volumes. Answers to these questions will hopefully elaborate on cost efficiency for potential future sensor design considerations.

SWIPE↗

Evaluating the Utility of Permethylated Polysaccharide Solution NMR Data for Characterization of Insoluble Plant Cell Wall Polysaccharides

Plant cell wall polysaccharide analysis encompasses the utilization of a variety of analytical tools, including gas and liquid chromatography, mass spectrometry (MS), and nuclear magnetic resonance (NMR) spectroscopy. These methods provide complementary data, which enable confident structural proposals of the many complex polysaccharide structures that exist in the complex matrices of plant cell walls. However, cell walls contain fractions of varying solubilities, and a few techniques are available that can analyze all fractions simultaneously. We have discovered that permethylation affords the complete dissolution of both soluble and insoluble polysaccharide fractions of plant cell walls in organic solvents such as chloroform or acetonitrile, which can then be analyzed by a number of analytical techniques including MS and NMR. In this work, NMR structure analysis of 10 permethylated polysaccharide standards was undertaken to generate chemical shift data providing insights into spectral changes that result from permethylation of polysaccharide residues. This information is of especial relevance to the structure analysis of insoluble polysaccharide materials that otherwise are not easily investigated by solution-state NMR methodologies. The preassigned NMR chemical shift data is shown to be vital for NMR structure analysis of minor polysaccharide components of plant cell walls that are particularly difficult to assign by NMR correlation data alone. With the assigned chemical shift data, we analyzed the permethylated samples of destarched, alcohol-insoluble residues of switchgrass and poplar by two-dimensional NMR spectral profiling. Thus, we identified, in addition to the major polysaccharide components, two minor polysaccharides, namely, <5% 3-linked arabinoxylan (switchgrass) and <2% glucomannan (poplar). In particular, the position of the arabinose residue in the arabinoxylan of the switchgrass sample was confidently assigned based on chemical shift values, which are highly sensitive to local chemical environments. Furthermore, the high resolution afforded by the 1H NMR spectra of the permethylated switchgrass and poplar samples allowed facile relative quantitative analysis of their polysaccharide composition, utilizing only a few milligrams of the cell wall material. As a result, the concepts herein developed will thus facilitate NMR structure analysis of insoluble plant cell wall polysaccharides, more so of minor cell wall components that are especially challenging to analyze with current methods.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Observational Constraints on the Spatial Effect of Greenness and Canopy Cover on Urban Heat in a Major Midlatitude City

Abstract Urban heat stress is a critical issue, particularly in cities where dense infrastructure and limited green space exacerbate temperature extremes. This study investigates the impact of greenery (EVI2), canopy cover (CC), impervious cover (IC), and water bodies on heat index in Chicago using high‐resolution data from the Heat Watch campaign. We find that EVI2, CC and proximity to water body significantly reduce heat while IC increases heat, particularly in the afternoon when solar radiation is intense. Additionally, the effective radius that land cover impacts heat is smaller in the afternoon. The combined effect analysis indicates that enhancing total greenness, not just canopy cover, is the most effective strategy to reduce heat. This study underscores the importance of strategic vegetation management, highlighting the critical role of integrated approaches in reducing urban heat.

Lee, Jangho↗

Error-controlled, progressive, and adaptable retrieval of scientific data with multilevel decomposition

Extreme-scale simulations and high-resolution instruments have been generating an increasing amount of data, which poses significant challenges to not only data storage during the run, but also post-processing where data will be repeatedly retrieved and analyzed for a long period of time. The challenges in satisfying a wide range of post-hoc analysis needs while minimizing the I/O overhead caused by inappropriate and/or excessive data retrieval should never be left unmanaged. In this paper, we propose a data refactoring, compressing, and retrieval framework capable of 1) fine-grained data refactoring with regard to precision; 2) incrementally retrieving and recomposing the data in terms of various error bounds; and 3) adaptively retrieving data in multi-precision and multi-resolution with respect to different analysis. With the progressive data re-composition and the adaptable retrieval algorithms, our framework significantly reduces the amount of data retrieved when multiple incremental precision are requested and/or the downstream analysis time when coarse resolution is used. Experiments show that the amount of data retrieved under the same progressively requested error bound using our framework is 64% less than that using state-of-the-art single-error-bounded approaches. Parallel experiments with up to 1, 024 cores and ~ 600 GB data in total show that our approach yields 1.36× and 2.52× performance over existing approaches in writing to and reading from persistent storage systems, respectively.

Liang, Xin↗

reV (The Renewable Energy Potential Model - Open Source) [SWR-21-59, SWR-20-20 and SWR-17-34]

The Renewable Energy Potential (reV) model is a platform for the detailed assessment of renewable energy resources and their geospatial intersection with grid infrastructure and land use characteristics. The reV model currently supports photovoltaic (PV), concentrating solar power (CSP), and land-based wind turbine technologies. Modules in the reV framework function at different spatial and temporal resolutions, allowing for the assessment of resource potential, technical potential, and supply curves at varying levels of detail. The platform runs on the National Renewable Energy Laboratory’s (NREL’s) high-performance computing system, providing scalable and efficient performance from a single location up to a continent, for a single year or decades of time-series resource data. Coupled with NREL’s System Advisor Model (SAM), reV supports resource assessments from 5-minute to hourly temporal resolutions and supports the analysis of long-term (i.e., year-on-year) variability of renewable generation (e.g., interannual variability and exceedance probabilities).

Maclaurin, Galen↗

metabCombiner 2.0: Disparate Multi-Dataset Feature Alignment for LC-MS Metabolomics

Liquid chromatography–high-resolution mass spectrometry (LC-HRMS), as applied to untargeted metabolomics, enables the simultaneous detection of thousands of small molecules, generating complex datasets. Alignment is a crucial step in data processing pipelines, whereby LC-MS features derived from common ions are assembled into a unified matrix amenable to further analysis. Variability in the analytical factors that influence liquid chromatography separations complicates data alignment. This is prominent when aligning data acquired in different laboratories, generated using non-identical instruments, or between batches from large-scale studies. Previously, we developed metabCombiner for aligning disparately acquired LC-MS metabolomics datasets. Here, we report significant upgrades to metabCombiner that enable the stepwise alignment of multiple untargeted LC-MS metabolomics datasets, facilitating inter-laboratory reproducibility studies. To accomplish this, a “primary” feature list is used as a template for matching compounds in “target” feature lists. We demonstrate this workflow by aligning four lipidomics datasets from core laboratories generated using each institution’s in-house LC-MS instrumentation and methods. We also introduce batchCombine, an application of the metabCombiner framework for aligning experiments composed of multiple batches. metabCombiner is available as an R package on Github and Bioconductor, along with a new online version implemented as an R Shiny App.

97 MATHEMATICS AND COMPUTING↗

Solar modulation of protons and alpha particles at rigidities of 4-10 GV/c

The high statistics and high resolution rigidity spectra from geomagnetic cutoff to 160 GV/c were provided by a superconducting-magnet spectrometer flown on a balloon. The spectra above 8.3 GV/c fit a power law in rigidity for protons and alphas; below 8.3 GV/c, no clear evidence of solar modification is available. The analysis of data from 5.5 to 8.3 GV/c by the Gleeson-Axford model for solar modulation indicated that the modulation parameter was 0.3 + or - 0.05 Gev/nucleon; the spectra below 5.5 GV/c are being analyzed using a portion of the flight data recorded while the balloon was essentially stationary

Badhwar, G. D.↗

Atlas of high resolution infrared spectra of carbon dioxide

An atlas of long-path room-temperature absorption spectra of carbon dioxide is presented for the spectral intervals 1830-2100 cm, 2395-2680 cm, and 3140-3235 cm. The spectral data were recorded at high signal to noise with the 0.01 cm resolution Fourier transform interferometer. The spectra were obtained with pressures between 1 and 10 Torr of CO2 and with total paths between 24 and 384 meters. A compilation of the measured line positions and the assignments derived from the analysis are presented. Of the 3336 lines in the atlas, 94 percent were identified as CO2 lines or as residual lines H2O and CO. Calculated positions are presented for the carbon dioxide lines; a total of 52 bands of C-12O2-16, C-13O2-16, C-12O-16O-18, C-12O-16O-17, and C-13O-16O18 were identified. The weakest carbon dioxide lines marked in the atlas have intensities of approximately 0.5 x 10 to the negative 26th power cm/molecule at room temperature.

Rinsland, C. P.↗

Characterization of Landsat-4 MSS and TM digital image data

The launch of Landsat-4 in July 1982 represents a continuation in the remote sensing of earth resources. The 80-m spatial resolution provided by the Multispectral Scanner (MSS) on board the satellite is fine enough to resolve many natural features and land-use details in both rural and urban settings. The second sensor of the spacecraft, the Thematic Mapper (TM), introduces a new era of sensing with refined spatial resolution (30 m) and expanded spectral coverage (7 bands). This paper describes results from engineering studies of the characteristics of digital image data from the two Landsat-4 sensors. These studies form a part of the Landsat-4 Image Data Quality Analysis program (LIDQA). The image data were generally found to be of high quality and the TM provided several improvements over the MSS, in its spatial and spectral characteristics.

Malila, W. A.↗

Production of global sea surface temperature fields for the Jet Propulsion Laboratory workshop comparisons

Sea surface temperature (SST) is measured from space by the advanced very high resolution radiometer (AVHRR), scanning multichannel microwave radiometer (SMMR), high resolution infrared sounder (HIRS) and VISSR atmospheric sounder (VAS). Typical accuracies have been reported from 0.5 C regionally to 2.0 C on a global basis. To evaluate the accuracy of the satellite-derived sea surface temperatures, a series of three workshops was organized to provide uniform data reduction and analysis. The analytical techniques used to intercompare satellite and in situ measurements are described in detail. Selected results showed the overall average rms errors were in the range 0.5-1.0 C.

Hilland, J. E.↗

Analysis of airborne Doppler lidar measurements of the extended California sea breeze

Airborne Doppler lidar data obtained by NASA near the top of the PBL in the central valley of California are analyzed. The experimental conditions and quality of the data are described. Wind vectors are produced on a geographic grid divided into 1-km square cells. The resulting wind field has features similar to those seen in ground level wind observations. It is suggested that, although the analysis is labor intensive and cumbersome, it produces a previously unattainable high-resolution depiction of air flow over a broad region.

Carroll, John J.↗

Analysis of hyper-spectral AVIRIS image data over a mixed-conifer forest in Maine

An introduction to some of the potential uses of hyperspectral data for ecosystem analysis is presented. The examples given are derived from a digital dataset acquired over a sub-boreal forest in central Maine in 1990 by the NASA-JPL Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) instrument gathers data from 400 to 2500 nm in 224 channels at bandwidths of approximately 10 nm. As a preview to the uses of the hyperspectral data, several products from this dataset were extracted. They range from the traditional false color composite made from simulated Thematic Mapper bands and the well known normalized difference vegetation index to much more exotic products such as fractions of vegetation, soil and shade based on linear spectral mixing models and estimates of the leaf water content at the landscape level derived using spectrum-matching techniques. Our research and that of many others indicates that the hyperspectral datasets carry much important information which is only beginning to be understood. This analysis gives an initial indication of the utility of hyperspectral data. Much work still remains to be done in algorithm development and in understanding the physics behind the complex information signal carried in the hyperspectral datasets. This work must be carried out to provide the fullest science support for high spectral resolution data to be acquired by many of the instruments to be launched as part of the Earth Observing System program in the mid-1990's.

Lawrence, William T.↗

Photospheric origins of chromospheric and coronal activity

This contract is for a two-year research study of the origins of activity in the upper atmosphere of the sun. The approach is to collect high resolution images of the lower atmosphere on observing runs at the Swedish Solar Observatory on La Palma, Canary Islands, Spain. The best observations are analyzed and compared with data from other telescopes and/or theoretical models, to study magnetic flux emergence, coronal heating, and various dynamic phenomena and transients. Software for analysis and visualization of the data is developed as needed. The contract is being performed by the Solar and Astrophysics Laboratory, part of the Lockheed Palo Alto Research Laboratory (LPARL) of the Research and Development Division (RDD) of Lockheed Missiles and Space Co., Inc. (LMSC).

Tarbell, Theodore↗

The isostatic state of Mead crater

We have analyzed high-resolution Magellan Doppler tracking data over Mead crater, using both line-of-sight and spherical harmonic methods, and have found a negative gravity anomaly of about 4-5 mgal (at spacecraft altitude, 182 km). This is consistent with no isostatic compensation of the present topography; the uncertainty in the analysis allows perhaps as much as 30% compensation at shallow dpeths (approximately 25 km). This is similar to observations of large craters on Earth, which are not generally compensated, but contrasts with at least some lunar basins which are inferred to have large Moho uplifts and corresponding positive Bouguer anomalies. An uncompensated load of this size requires a lithosphere with an effective elastic lithosphere thickness greater than 30 km. In order for the crust-mantle boundary not to have participated in the deformation associated with the collapse of the transient cavity during the creation of the crater, the yield strength near the top of the mantle must have been significantly higher on Earth and Venus than on the Moon at the time of basin formation. This might be due to increased strength against frictional sliding at the higher confining pressures within the larger planets. Alternatively, the thinner crusts of Earth and Venus compared to that of the Moon may result in higher creep strength of the upper mantle at shallower depths.

Banerdt, W. B.↗

RADARSAT: The Antarctic Mapping Project

The first Antarctic Imaging Campaign (AIC) occurred during the period September 9, 1997 through October 20, 1997. The AIC utilized the unique attributes of the Canadian RADARSAT-1 to acquire the first, high-resolution, synthetic aperture imagery covering the entire Antarctic Continent. Although the primary goal of the mission was the acquisition of image data, the nearly flawless execution of the mission enabled additional collections of exact repeat orbit data. These data, covering an extensive portion of the interior Antarctic, potentially are suitable for interferometric analysis of topography and surface velocity. This document summarizes the Project through completion with delivery of products to the NASA DAACs.

Jezek, Kenneth C.↗