Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “structural features”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,117 records · Page 62

Ground state in the novel dimer iridate Ba 13 Ir 6 O 30 with Ir 6+ (5$d^3$) ions

We have synthesized and studied an iridate, Ba 13 Ir 6 O 30 , with unusual Ir oxidation states: 2/3 Ir 6+ (5$d^3$) ions and 1/3 Ir 5+ (5$d^4$) ions. Its crystal structure features dimers of face-sharing IrO 6 octahedra, and IrO 6 monomers that are linked via long, zigzag Ir-O-Ba-O-Ir pathways. Nevertheless, Ba 13 Ir 6 O 30 exhibits two transitions at $T_{\text{N}1}$ = 4.7K and $T_{\text{N}2}$ = 1.6 K. This magnetic order is accompanied by a huge Sommerfeld coefficient 200 mJ/mole K 2 below $T_{\text{N}2}$, signaling a coexisting frustrated/disordered state persisting down to at least 0.05 K. This iridate hosts unusually large $J_{\text{eff}}$ = 3/2 degrees of freedom, which is enabled by strong spin-orbit interactions (SOI) in the monomers with Ir 6+ ions and a joint effect of molecular orbitals and SOI in the dimers occupied by Ir 5+ and Ir 6+ ions. Features displayed by the magnetization and heat capacity suggest that the combination of covalency, SOI, and large effective spins leads to highly frustrated ferrimagnetic ordering, an interesting feature of this high-spin iridate.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Nanoscale dynamics during self-organized ion beam patterning of Si. II. Kr + bombardment

Understanding the self-organized ion beam nanopatterning of elemental semiconductors, particularly silicon, is of intrinsic scientific and technological interest. This is the second component of a two-part coherent x-ray scattering and x-ray photon correlation spectroscopy (XPCS) investigation of the kinetics and fluctuation dynamics of nanoscale ripple development on silicon during 1 keV Ar + (part I) and Kr + bombardment at 65° polar angle. Here it is found that the ion-enhanced viscous flow relaxation is essentially equal for Kr + -induced patterning as previously found for Ar + patterning despite the difference in ion masses. However, the magnitude of the surface curvature-dependent roughening rate in the early-stage kinetics is larger for Kr + than for Ar + , consistent with expectations that the heavier ion gives an increased mass redistributive contribution to the initial surface instability. As with the Ar + case, fluctuation dynamics in the late stage show a peak in correlation times at the length scale corresponding to the dominant structural feature on the surface—the ripples. Finally, it is shown that speckle motion during the surface evolution can be analyzed to determine spatial inhomogeneities in erosion rate and ripple velocity. This allows the direction and speed of ripple motion to be measured in a real time experiment. In the present case, ripple motion is found to be into the projected direction of the ion source, in contrast to expectations from an existing sputter erosion driven model with parameters derived from binary collision approximation simulations.

36 MATERIALS SCIENCE↗

First-principles calculations of metal surfaces. II. Properties of low-index platinum surfaces toward understanding electron emission

The stability of low-index platinum surfaces and their electronic properties is investigated with density functional theory, toward the goal of understanding the surface structure and electron emission, and identifying precursors to electrical breakdown, on nonideal platinum surfaces. Propensity for electron emission can be related to a local work function, which, in turn, is intimately dependent on the local surface structure. The (1×N) missing row reconstruction of the Pt(110) surface is systematically examined. The (1×3) missing row reconstruction is found to be the lowest in energy, with the (1×2) and (1×4) slightly less stable. In the limit of large (1×N) with wider (111) nanoterraces, the energy accurately approaches the asymptotic limit of the infinite Pt(111) surface. Furthermore, this suggests a local energetic stability of narrow (111) nanoterraces on free Pt surfaces that could be a common structural feature in the complex surface morphologies, leading to work functions consistent with those on thermally grown Pt substrates.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Light-induced Weyl semiconductor-to-metal transition mediated by Peierls instability

Elemental tellurium is a strongly spin-orbit coupled Peierls-distorted semiconductor whose band structure features topologically protected Weyl nodes. Here, using time-dependent density functional theory calculations, we show that impulsive optical excitation can be used to transiently control the amplitude of the Peierls distortion, realizing a mechanism to switch tellurium between three states: Weyl semiconductor, Weyl metal and non-Weyl metal. Further, we present experimental evidence of this inverse-Peierls distortion using time-resolved optical second harmonic generation measurements. These results provide a pathway to multifunctional ultrafast Weyl devices and introduce Peierls systems as viable hosts of light-induced topological transitions.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Structural and double magnetic transitions in the frustrated spin- 1 2 capped-kagome antiferromagnet ( RbCl ) Cu 5 P 2 O 10

The structural and magnetic properties of the geometrically frustrated spin- 1 2 capped-kagome antiferromagnet (RbCl) Cu 5 P 2 O 10 are investigated via temperature-dependent x-ray diffraction, magnetization, heat capacity, and 31 P NMR experiments on a polycrystalline sample. It undergoes a structural transition at around T t ≃ 310 K from a high-temperature trigonal (P ¯3m1) to a low-temperature monoclinic (C2/c) unit cell, where the low-temperature structure features the capped-kagome geometry of Cu 2+ ions. Interestingly, it shows the onset of two successive magnetic transitions at T N1 ≃ 20 K and T N2 ≃ 7 K. The shape of the 31 P NMR spectra unfolds the possible nature of the transitions below T N1 and T N2 to be of incommensurate and commensurate antiferromagnetic type, respectively. A large value of the Curie-Weiss temperature as compared to T N1 sets the frustration parameter f ≃ 8, ensuring strong magnetic frustration in the compound. From the 31 P NMR spin-lattice relaxation rate, the leading antiferromagnetic exchange coupling is estimated to be J/k B ≃ 117 K. Furthermore, these unusual double magnetic transitions make this compound beguiling for further investigations.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Diffusion coefficients predicting facet-dependent crystallization in amorphous silicon nitride

Amorphous silicon nitride is a common material in microelectronics devices, which acts as an insulating barrier. Extended annealing times at elevated temperature can initiate crystallization of α-Si 3 ⁢ N 4 , which does not possess the same barrier properties. Molecular dynamics can resolve the fundamental mechanism for α-Si 3 ⁢N 4 crystallization and the influence of local environments. Here, we compare two interatomic potentials and conclude that these models predict structural features (e.g., angular distributions and densities) which span the range of experimental measurements. We confirmed these models reproduce experimental estimates of activation energy and leveraged these models to identify crystallization drivers. We conclude that near-T g , facet-dependent silicon nitride crystal growth rates can be predicted directly by either bulk or interfacial diffusion properties.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Origin of spin gapless semiconductor behavior in CoFeCrGa: Theory and Experiment

Despite a plethora of materials suggested for spintronic applications, a new class of materials has emerged, namely spin gapless semiconductors (SGS), which offers potentially more advantageous properties than existing ones. These magnetic semiconductors exhibit a finite band gap for one spin channel and a closed gap for the other. Supported by electronic-structure calculations, we report evidence of SGS behavior in equiatomic quaternary CoFeCrGa, having a cubic Heusler (prototype LiMgPdSn) structure but exhibiting chemical disorder (DO 3 structure). CoFeCrGa is found to transform from SGS to half-metallic phase under pressure, which is attributed to unique electronic-structure features. The saturation magnetization (M S ) was obtained at 8K agrees with the Slater-Pauling rule and the Curie temperature (T C ) is found to exceed 400K. Carrier concentration (up to 250K) and electrical conductivity are observed to be nearly temperature independent, prerequisites for SGS. The anomalous Hall coefficient is estimated to be 185S/cm at 5K. Considering the SGS properties and high T C , this material appears to be promising for spintronic applications.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Electronic structure and magnetic properties in T 2 AlB 2 ( T = Fe, Mn, Cr, Co, and Ni) and their alloys

In this study, the electronic structure and intrinsic magnetic properties of Fe 2 AlB 2 -related compounds and their alloys have been investigated using density functional theory. For Fe 2 AlB 2 , the crystallographic a axis is the easiest axis, which agrees with experiments. The magnetic ground state of Mn 2 AlB 2 is found to be ferromagnetic in the basal ab plane, but antiferromagnetic along the c axis. All 3d dopings considered decrease the magnetization and Curie temperature in Fe 2 AlB 2 . Electron doping with Co or Ni has a stronger effect on the decreasing of Curie temperature in Fe 2 AlB 2 than hole doping with Mn or Cr. However, a larger amount of Mn doping on Fe 2 AlB 2 promotes the ferromagnetic to antiferromagnetic transition. A very anisotropic magnetoelastic effect is found in Fe 2 AlB 2 : the magnetization has a much stronger dependence on the lattice parameter c than on a or b, which is explained by electronic-structure features near the Fermi level. Dopings of other elements on B and Al sites are also discussed.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Absence of Dirac states in BaZnBi 2 induced by spin-orbit coupling

We report magnetotransport properties of BaZnBi 2 single crystals. Whereas electronic structure features Dirac states, such states are removed from the Fermi level by spin-orbit coupling (SOC) and consequently electronic transport is dominated by the small hole and electron pockets. Our results are consistent with not only three-dimensional, but also with quasi-two-dimensional portions of the Fermi surface. The SOC-induced gap in Dirac states is much larger when compared to isostructural SrMnBi 2 . This suggests that not only long-range magnetic order, but also mass of the alkaline-earth atoms A in ABX 2 ( A = alkaline-earth, B = transition-metal, and X = Bi/Sb) are important for the presence of low-energy states obeying the relativistic Dirac equation at the Fermi surface.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Averievite: A copper oxide kagome antiferromagnet

Averievite, Cu 5 V 2 O 10 (CsCl) , is an oxide mineral composed of Cu 2+ kagome layers sandwiched by Cu 2+ -V 5+ honeycomb layers. We have synthesized this oxide and investigated its properties from ab initio calculations along with susceptibility and specific heat measurements. The data imply a Curie-Weiss temperature of 185K as well as long-range magnetic order at 24 K due to the significant interlayer coupling from the honeycomb copper ions. This order is suppressed by substituting copper by isoelectronic zinc, suggesting that Zn-substituted averievite is a promising spin liquid candidate. A further proposed substitution that replaces V 5+ by Ti 4+ not only dopes the material but is predicted to give rise to a two-dimensional electronic structure featuring Dirac crossings. Thus, averievite is an attractive platform for S =1/2 kagome physics with the potential for realizing novel electronic states.

36 MATERIALS SCIENCE↗

β -decay feeding intensity distribution of Mn 64

Nuclei around the N=40 “Island of Inversion” exhibit interesting structure features that have been the focus of several experimental and theoretical studies. Here, the present work presents the first complete study of the β-decay feeding intensity distribution and Gamow-Teller distribution for the β decay of 64 Mn to 64 Fe up to ~10 MeV. The β-decay intensity function was extracted from Total Absorption Spectroscopy measurements made at the National Superconducting Cyclotron Laboratory with the Summing NaI(Tl) (SuN) detector. The experimental results are compared to shell model calculations with and without the inclusion of the νg 9/2 orbital. From this comparison it is clear that the νg 9/2 orbital is essential for the accurate description of the 64 Fe β-decay strength above ~3 MeV, emphasizing once again the transitional nature of this nucleus into the N=40 Island of Inversion.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Crystal structure of the toxin Msmeg_6760, the structural homolog of Mycobacterium tuberculosis Rv2035, a novel type II toxin involved in the hypoxic response

The structure of Msmeg_6760, a protein of unknown function, has been determined. Biochemical and bioinformatics analyses determined that Msmeg_6760 interacts with a protein encoded in the same operon, Msmeg_6762, and predicted that the operon is a toxin–antitoxin (TA) system. Structural comparison of Msmeg_6760 with proteins of known function suggests that Msmeg_6760 binds a hydrophobic ligand in a buried cavity lined by large hydrophobic residues. Access to this cavity could be controlled by a gate–latch mechanism. The function of the Msmeg_6760 toxin is unknown, but structure-based predictions revealed that Msmeg_6760 and Msmeg_6762 are homologous to Rv2034 and Rv2035, a predicted novel TA system involved in Mycobacterium tuberculosis latency during macrophage infection. The Msmeg_6760 toxin fold has not been previously described for bacterial toxins and its unique structural features suggest that toxin activation is likely to be mediated by a novel mechanism.

Bajaj, R. Alexandra↗

Structure of a fungal form of aspartate-semialdehyde dehydrogenase from Aspergillus fumigatus

Aspartate-semialdehyde dehydrogenase (ASADH) functions at a critical junction in the aspartate biosynthetic pathway and represents a validated target for antimicrobial drug design. This enzyme catalyzes the NADPH-dependent reductive dephosphorylation of β-aspartyl phosphate to produce the key intermediate aspartate semialdehyde. The absence of this entire pathway in humans and other mammals will allow the selective targeting of pathogenic microorganisms for antimicrobial development. Here, the X-ray structure of a new form of ASADH from the pathogenic fungal species Aspergillus fumigatus has been determined. The overall structure of this enzyme is similar to those of its bacterial orthologs, but there are some critical differences both in biological assembly and in secondary-structural features that can potentially be exploited for the development of species-selective drugs with selective toxicity against infectious fungal organisms.

Dahal, Gopal P.↗

Crystal structure of MbnF: an NADPH-dependent flavin monooxygenase from Methylocystis strain SB2

Methanobactins (MBs) are ribosomally produced and post-translationally modified peptides (RiPPs) that are used by methanotrophs for copper acquisition. The signature post-translational modification of MBs is the formation of two heterocyclic groups, either an oxazolone, pyrazinedione or imidazolone group, with an associated thioamide from an X -Cys dipeptide. The precursor peptide (MbnA) for MB formation is found in a gene cluster of MB-associated genes. The exact biosynthetic pathway of MB formation is not yet fully understood, and there are still uncharacterized proteins in some MB gene clusters, particularly those that produce pyrazinedione or imidazolone rings. One such protein is MbnF, which is proposed to be a flavin monooxygenase (FMO) based on homology. To help to elucidate its possible function, MbnF from Methylocystis sp. strain SB2 was recombinantly produced in Escherichia coli and its X-ray crystal structure was resolved to 2.6 Å resolution. Based on its structural features, MbnF appears to be a type A FMO, most of which catalyze hydroxylation reactions. Preliminary functional characterization shows that MbnF preferentially oxidizes NADPH over NADH, supporting NAD(P)H-mediated flavin reduction, which is the initial step in the reaction cycle of several type A FMO enzymes. It is also shown that MbnF binds the precursor peptide for MB, with subsequent loss of the leader peptide sequence as well as the last three C-terminal amino acids, suggesting that MbnF might be needed for this process to occur. Finally, molecular-dynamics simulations revealed a channel in MbnF that is capable of accommodating the core MbnA fragment minus the three C-terminal amino acids.

59 BASIC BIOLOGICAL SCIENCES↗

Crystal structure of a putative 3-hydroxypimelyl-CoA dehydrogenase, Hcd1, from Syntrophus aciditrophicus strain SB at 1.78 Å resolution

Syntrophus aciditrophicus strain SB is a model syntroph that degrades benzoate and alicyclic acids. Here, the structure of a putative 3-hydroxypimelyl-CoA dehydrogenase from S. aciditrophicus strain SB (SaHcd1) was resolved at 1.78 Å resolution. SaHcd1 contains sequence motifs and structural features that belong to the short-chain dehydrogenase/reductase (SDR) family of NADPH-dependent oxidoreductases. SaHcd1 is proposed to concomitantly reduce NAD + or NADP + to NADH or NADPH, respectively, while converting 3-hydroxypimelyl-CoA to 3-oxopimeyl-CoA. Further enzymatic studies are needed to confirm the function of SaHcd1.

59 BASIC BIOLOGICAL SCIENCES↗

Efficient, Parallel At-scale Correlation Analysis for Atom Probe Tomography on Hybrid Architectures

Atom probe tomography (APT) is a material probing technique that has undergone dramatic improvements in its capability to map individual atoms within a material sample resulting in data files with hundreds of millions of atoms. Understanding the nano-structural features hidden in these massive amounts of atomic data is a crucial analysis task for materials scientists. However, fast analysis capabilities for large APT workloads remains a critical bottleneck. In this paper, we present the design, implementation and detailed performance evaluations of a parallel software capable of efficiently performing extremely time-consuming correlation analyses of massive high density APT data. Starting with shared memory implementations to motivate our design choices, we extend the implementation to hybrid architectures keeping realistic APT workloads in mind. Detailed performance analyses of three different parallel implementations of the software are supported by empirical results on a Cray XC30 and a Cray XC40 architecture. Its usefulness is demonstrated by reducing the turnaround time of an end-to-end APT correlation analysis on 100 millions atoms by three orders of magnitude using 2048 MPI ranks on 1024 nodes (24 cores per node) of a Cray XC30. The software reported here equips material scientists for the first time with a high-speed scalable capability for efficient and timely analyses of massive APT data.

Lu, Hao↗

High Efficient THz Emission From Unbiased and Biased Semiconductor Nanowires Fabricated Using Electron Beam Lithography

Besides having perfect control on structural features, such as vertical alignment and uniform distribution by fabricating the wires via e-beam lithography and etching process, we also investigated the THz emission from these fabricated nanowires when they are applied DC bias voltage. To be able to apply a voltage bias, an interdigitated gold (Au) electrode was patterned on the high-quality InGaAs epilayer grown on InP substrate bymolecular beam epitaxy. Afterwards, perfect vertically aligned and uniformly distributed nanowires were fabricated in between the electrodes of this interdigitated pattern so that we could apply voltage bias to improve the THz emission. As a result, we achieved enhancement in the emitted THz radiation by ~four times, about 12 dB increase in power ratio at 0.25 THz with a DC biased electric field compared with unbiased NWs.

Biased emission↗

Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species

Prokaryotic laccases are emergent biocatalysts. However, they have not been broadly found and characterized in bacterial organisms, especially in lactic acid bacteria. Recently, a prokaryotic laccase from the lactic acid bacterium Pediococcus acidilactici 5930, which can degrade biogenic amines, was discovered. Thus, our study aimed to shed light on laccases from lactic acid bacteria focusing on two Pediococcus laccases, P. acidilactici 5930 and Pediococcus pentosaceus 4816, which have provided valuable information on their biochemical activities on redox mediators and biogenic amines. Both laccases are able to oxidize canonical substrates as ABTS, ferrocyanide and 2,6-DMP, and non-conventional substrates as biogenic amines. With ABTS as a substrate, they prefer an acidic environment and show sigmoidal kinetic activity, and are rather thermostable. Moreover, this study has provided the first structural view of two lactic acid bacteria laccases, revealing new structural features not seen before in other well-studied laccases, but which seem characteristic for this group of bacteria. We believe that understanding the role of laccases in lactic acid bacteria will have an impact on their biotechnological applications and provide a framework for the development of engineered lactic acid bacteria with enhanced properties.

36 MATERIALS SCIENCE↗