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At least 1,117 records · Page 62
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

K2 Optical Emission from OJ 287 and Other γ-Ray Blazars on Hours-to-weeks Timescales from 2014 to 2018

We present second observations by K2 of OJ 287 and seven other γ-ray active galactic nuclei (AGNs) obtained in 2017–2018, second and third observations of the lobe-dominated, steep-spectrum quasar 3C 207, and observations of nine additional blazars not previously observed with K2. The AGNs were observed simultaneously with K2 and the Fermi Large Area Telescope for 51–81 days. Our full sample, observed in 2014–2018, contained 16 BL Lacertae objects (BL Lacs), nine flat-spectrum radio quasars (FSRQs), and four other γ-ray AGNs. Twelve BL Lacs and seven FSRQs exhibited fast, jagged light curves, while four BL Lacs and two FSRQs had slow, smooth light curves. Some objects changed their red-noise character significantly between repeated K2 observations. The optical characteristics of OJ 287 derived from the short-cadence K2 light curves changed between observations made before and after the predicted passage of the suspected secondary supermassive black hole through the accretion disk of the primary supermassive black hole. The average slopes of the periodogram power spectral densities of the BL Lacs' and FSRQs' light curves differed significantly, by ≈12%, with the BL Lac slopes being steeper, and a Kolmogorov–Smirnov test with a p-value of 0.039 indicates that these samples probably come from different populations; however, this result is not as strongly supported by power spectral response (PSRESP) analyses. Differences in the origin of the jets from the ergosphere or accretion disk in these two classes could produce such a disparity, as could different sizes or locations of emission regions within the jets.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Search for Correlations of High-energy Neutrinos Detected in IceCube with Radio-bright AGN and Gamma-Ray Emission from Blazars

The IceCube Neutrino Observatory sends realtime neutrino alerts with a high probability of being astrophysical in origin. We present a new method to correlate these events and possible candidate sources using 2089 blazars from the Fermi-LAT 4LAC-DR2 catalog and with 3413 active galactic nuclei (AGNs) from the Radio Fundamental Catalog. No statistically significant neutrino emission was found in any of the catalog searches. The result suggests that a small fraction, <1%, of the studied AGNs emit neutrinos that pass the alert criteria, and is compatible with prior evidence for neutrino emission presented by IceCube and other authors from sources such as TXS 0506 + 056 and PKS 1502 + 106. We also present cross-checks to other analyses that claim a significant correlation using similar data samples.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

The LSST AGN Data Challenge: Selection Methods

Abstract Development of the Rubin Observatory Legacy Survey of Space and Time (LSST) includes a series of Data Challenges (DCs) arranged by various LSST Scientific Collaborations that are taking place during the project's preoperational phase. The AGN Science Collaboration Data Challenge (AGNSC-DC) is a partial prototype of the expected LSST data on active galactic nuclei (AGNs), aimed at validating machine learning approaches for AGN selection and characterization in large surveys like LSST. The AGNSC-DC took place in 2021, focusing on accuracy, robustness, and scalability. The training and the blinded data sets were constructed to mimic the future LSST release catalogs using the data from the Sloan Digital Sky Survey Stripe 82 region and the XMM-Newton Large Scale Structure Survey region. Data features were divided into astrometry, photometry, color, morphology, redshift, and class label with the addition of variability features and images. We present the results of four submitted solutions to DCs using both classical and machine learning methods. We systematically test the performance of supervised models (support vector machine, random forest, extreme gradient boosting, artificial neural network, convolutional neural network) and unsupervised ones (deep embedding clustering) when applied to the problem of classifying/clustering sources as stars, galaxies, or AGNs. We obtained classification accuracy of 97.5% for supervised models and clustering accuracy of 96.0% for unsupervised ones and 95.0% with a classic approach for a blinded data set. We find that variability features significantly improve the accuracy of the trained models, and correlation analysis among different bands enables a fast and inexpensive first-order selection of quasar candidates.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2024

Latent Stochastic Differential Equations for Modeling Quasar Variability and Inferring Black Hole Properties

Quasars are bright and unobscured active galactic nuclei (AGN) thought to be powered by the accretion of matter around supermassive black holes at the centers of galaxies. The temporal variability of a quasar’s brightness contains valuable information about its physical properties. The UV/optical variability is thought to be a stochastic process, often represented as a damped random walk described by a stochastic differential equation (SDE). Upcoming wide-field telescopes such as the Rubin Observatory Legacy Survey of Space and Time (LSST) are expected to observe tens of millions of AGN in multiple filters over a ten year period, so there is a need for efficient and automated modeling techniques that can handle the large volume of data. Latent SDEs are machine learning models well suited for modeling quasar variability, as they can explicitly capture the underlying stochastic dynamics. In this work, we adapt latent SDEs to jointly reconstruct multivariate quasar light curves and infer their physical properties such as the black hole mass, inclination angle, and temperature slope. Our model is trained on realistic simulations of LSST ten year quasar light curves, and we demonstrate its ability to reconstruct quasar light curves even in the presence of long seasonal gaps and irregular sampling across different bands, outperforming a multioutput Gaussian process regression baseline. Our method has the potential to provide a deeper understanding of the physical properties of quasars and is applicable to a wide range of other multivariate time series with missing data and irregular sampling.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

An Estimate of the Impact of Reionization on Supermassive Black Hole Growth

Abstract The supermassive black holes (SMBHs) that power active galactic nuclei found at z ≥ 6 were formed during the Epoch of Reionization. Because reionization is an inhomogeneous process, the physical properties of SMBH host-galaxy environments will vary spatially during reionization. We construct a semi-analytic model to estimate the impact of reionization on SMBH growth. Using a series of merger trees, reionization models, and black hole (BH) growth models, we find that early reionization can reduce a SMBH’s mass by up to [50, 70, 90]% within dark matter halos of mass [10 12 , 10 11 , 10 10 ] M ⊙ by z = 6. Our findings also suggest that the redshift range in which BH growth is impacted by reionization strongly depends on whether the Eddington accretion rate can be exceeded. If so, we find that BH masses are significantly suppressed principally during the early phases of reionization ( z ≳ 10), while they are more readily suppressed across the full redshift range if super-Eddington growth is not allowed. We find that the global average impact of reionization may be to reduce the masses of BHs residing in ≲10 11 M ⊙ halos by a factor of ≳2. The census of SMBHs being uncovered by the JWST may offer a means to test the basic prediction that more massive BHs reside in cosmological volumes that are reionized at later times.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

The SPT-Chandra BCG Spectroscopic Survey. I. Evolution of the Entropy Threshold for ICM Cooling and AGN Feedback in Galaxy Clusters over the Last 10 Gyr

Abstract We present a multiwavelength study of the brightest cluster galaxies (BCGs) in a sample of the 95 most massive galaxy clusters selected from the South Pole Telescope Sunyaev–Zeldovich (SZ) survey. Our sample spans a redshift range of 0.3 < z < 1.7, and is complete with optical spectroscopy from various ground-based observatories, as well as ground and space-based imaging from optical, X-ray, and radio wave bands. At z ∼ 0, previous studies have shown a strong correlation between the presence of a low-entropy cool core and the presence of both star formation and radio-loud active galactic nuclei in the central BCG. We show for the first time that the central entropy threshold for triggering star formation, which is universally seen in nearby systems, persists out to z ∼ 1, with only marginal (∼1 σ ) evidence for evolution in the threshold entropy value itself. In contrast, we do not find a similar high- z analog for an entropy threshold for feedback, but instead measure a strong evolution in the fraction of radio-loud BCGs in high-entropy cores, decreasing with increasing redshift. This could imply that the cooling-feedback loop was not as tight in the past, or that some other fuel source like mergers are fueling the radio sources more often with increasing redshift, making the radio luminosity an increasingly unreliable proxy for radio jet power. We also find that our SZ-based sample is missing a small (∼4%) population of the most luminous radio sources ( ν L ν > 10 42 erg s −1 ), likely due to radio contamination suppressing the SZ signal with which these clusters are detected.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Simulation of Binary-single Interactions in AGN Disk. I. Gas-enhanced Binary Orbital Hardening

Stellar-mass binary black hole (BBH) mergers within the accretion disks of active galactic nuclei may contribute to gravitational wave (GW) events detected by ground-based GW detectors. In particular, the interaction between a BBH and a single stellar-mass black hole (sBH), known as the binary-single interaction (BSI) process, can potentially lead to GW events with detectable nonzero eccentricity. Previous studies of the BSI process, which neglected the effects of gas, showed that BSIs contribute non-negligibly to GW events in a coplanar disk environment. In this work, we conduct a series of two-dimensional hydrodynamical and N-body simulations to explore the BSI in a gas environment by coupling REBOUND with Athena++. We perform 360 simulation runs, spanning parameters in disk surface density Σ 0 and impact parameter b. We find that the gas-induced energy dissipation within the three-body system becomes significant if the encounter velocity between the sBHs is sufficiently large (≫c s ). Our simulation results indicate that approximately half of the end states of the BSI are changed by gas. Furthermore, at higher gas density, the number of close encounters during the BSI process will increase, and the end-state BBHs tend to be more compact. Consequently, the presence of gas may shorten the GW merger timescale for end-state BBHs and increase the three-body merger rate.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

The QPO in RE J1034+396 Originates in the Hot Corona

RE J1034+396 is one of the few active galactic nuclei (AGNs) with a significant quasiperiodic oscillation (QPO). The QPO has been observed in over 1 Ms of XMM-Newton observations spanning over a decade. We investigate the power spectral density function (PSD) of seven long (∼90 ks) XMM-Newton observations of the AGN RE J1034+396 in two energy bands. The soft (0.3–0.5 keV) band targets emission from the disk, while the hard (2–7 keV) band isolates the primary X-ray continuum emission from the corona. The QPO is significantly detected in the hard band of five of the seven observations. The best-fitting models indicate that the QPO detection in both bands is entirely attributable to the coronal emission with no additional contribution from the disk. This explains the strong coherence between the hard and soft bands at the QPO frequency. The covariance spectrum is consistent with this picture as the variability at QPO frequencies is attributed solely to fluctuations in the hot corona. The time lag as a function of energy is well described by a ∼2000 s intrinsic soft lag, resulting from the disk responding to emission from the corona, that undergoes phase wrapping at approximately the QPO frequency. By demonstrating that in this system the QPO arises in the corona, we provide new insights into the mechanisms generating QPOs.

Active galactic nuclei↗
DOE OSTI2025

Variable X-Ray Reverberation in the Rapidly Accreting Active Galactic Nucleus Ark 564: The Response of the Soft Excess to the Changing Geometry of the Inner Accretion Flow

X-ray reverberation, which exploits the time delays between variability in different energy bands as a function of Fourier frequency, probes the structure of the inner accretion disks and X-ray coronae of active galactic nuclei. We present a systematic X-ray spectroscopic and reverberation study of the high-Eddington-ratio narrow-line Seyfert 1 galaxy Ark 564, using over 900 ks of XMM-Newton and NuSTAR observations spanning 13 yr. The time-averaged spectra can be well described by a model consisting of a coronal continuum, relativistic disk reflection, warm Comptonization, and three warm absorbers. Leveraging the high X-ray brightness of Ark 564, we are able to resolve the time evolution of the spectra and contemporaneous reverberation lags. The soft-band lag relative to the continuum increases with the X-ray flux, while Fe Kα lags are detected in only a subset of epochs and do not correlate with soft lags. Models based on a lamppost corona and reflection from a standard thin disk can broadly reproduce the observed lag-energy spectra of low-flux epochs; however, additional reverberation from the warm Comptonized atmosphere is required to explain the soft lags observed in high-flux epochs. A vertically puffed-up inner disk and a variable, vertically extended corona can better explain the observed evolution of the lags and covariance spectra. Our study underscores the importance of multiepoch, multiband analyses for a comprehensive understanding the inner accretion disk and corona.

Active galactic nuclei↗
DOE OSTI2022

BASS. XXVI. DR2 Host Galaxy Stellar Velocity Dispersions

We present new central stellar velocity dispersions for 484 Sy 1.9 and Sy 2 from the second data release of the Swift/BAT AGN Spectroscopic Survey (BASS DR2). This constitutes the largest study of velocity dispersion measurements in X-ray-selected obscured active galactic nuclei (AGN) with 956 independent measurements of the Ca II H and K λ3969, 3934 and Mg I λ5175 region (3880–5550 Å) and the calcium triplet region (8350–8730 Å) from 642 spectra mainly from VLT/X-Shooter or Palomar/DoubleSpec. Our sample spans velocity dispersions of 40–360 km s 1 , corresponding to 4–5 orders of magnitude in black hole mass (M BH = 10 5.5-9.6 M ⊙ ), bolometric luminosity (L bol ~ 10 42–46 erg s -1 ), and Eddington ratio (L/L Edd ~ 10 -5 to 2). For 281 AGN, our data and analysis provide the first published central velocity dispersions, including six AGN with low-mass black holes (M BH = 10 5.5-6.5 M ⊙ ), discovered thanks to high spectral resolution observations (σ inst ~ 25 km s -1 ). The survey represents a significant advance with a nearly complete census of velocity dispersions of hard X-ray–selected obscured AGN with measurements for 99% of nearby AGN (z < 0.1) outside the Galactic plane (|b| > 10°). The BASS AGN have much higher velocity dispersions than the more numerous optically selected narrow-line AGN (i.e., ~150 versus ~100 km s -1 ) but are not biased toward the highest velocity dispersions of massive ellipticals (i.e., >250 km s -1 ). Despite sufficient spectral resolution to resolve the velocity dispersions associated with the bulges of small black holes (~10 4–5 M ⊙ ), we do not find a significant population of super-Eddington AGN. Using estimates of the black hole sphere of influence from velocity dispersion, direct stellar and gas black hole mass measurements could be obtained with existing facilities for more than ~100 BASS AGN.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

BASS. XXV. DR2 Broad-line-based Black Hole Mass Estimates and Biases from Obscuration

We present measurements of broad emission lines and virial estimates of supermassive black hole masses (M BH ) for a large sample of ultrahard X-ray-selected active galactic nuclei (AGNs) as part of the second data release of the BAT AGN Spectroscopic Survey (BASS/DR2). Our catalog includes M BH estimates for a total of 689 AGNs, determined from the Hα, Hβ, Mg II λ2798, and/or C IV λ1549 broad emission lines. The core sample includes a total of 512 AGNs drawn from the 70 month Swift/BAT all-sky catalog. We also provide measurements for 177 additional AGNs that are drawn from deeper Swift/BAT survey data. We study the links between M BH estimates and line-of-sight obscuration measured from X-ray spectral analysis. We find that broad Hα emission lines in obscured AGNs ($\mathrm{log}({N}_{{\rm{H}}}/{\mathrm{cm}}^{-2})\gt 22.0$) are on average a factor of ${8.0}_{-2.4}^{+4.1}$ weaker relative to ultrahard X-ray emission and about ${35}_{-12}^{\,+7}$% narrower than those in unobscured sources (i.e., $\mathrm{log}({N}_{{\rm{H}}}/{\mathrm{cm}}^{-2})\lt 21.5$). This indicates that the innermost part of the broad-line region is preferentially absorbed. Consequently, current single-epoch M BH prescriptions result in severely underestimated (>1 dex) masses for Type 1.9 sources (AGNs with broad Hα but no broad Hβ) and/or sources with $\mathrm{log}({N}_{{\rm{H}}}/{\mathrm{cm}}^{-2})\gtrsim 22.0$. We provide simple multiplicative corrections for the observed luminosity and width of the broad Hα component (L[bHα] and FWHM[bHα]) in such sources to account for this effect and to (partially) remedy M BH estimates for Type 1.9 objects. As a key ingredient of BASS/DR2, our work provides the community with the data needed to further study powerful AGNs in the low-redshift universe.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

A Catalog of Candidate Double and Lensed Quasars from Gaia and WISE Data

Making use of strong correlations between closely separated multiple or double sources and photometric and astrometric metadata in Gaia Early Data Release 3 (EDR3), we generate a catalog of candidate double- and multiply imaged lensed quasars and active galactic nuclei (AGNs), comprising 3140 systems. It includes two partially overlapping parts: a sample of distant (redshifts mostly greater than 1) sources with perturbed data; and systems that have been resolved into separate components by Gaia at separations less than 2''. For the first part, which is roughly one-third of the published catalog, we synthesized 0.617 million redshifts using multiple machine-learning prediction and classification methods, using independent photometric and astrometric data from Gaia EDR3 and the Wide-field Infrared Survey Explorer, with accurate spectroscopic redshifts from the Sloan Digital Sky Survey (SDSS) as a training set. Using these synthetic redshifts, we estimate a 4.9% rate of interlopers with spectroscopic redshifts below 1 in this part of the catalog. Unresolved candidate double and dual AGNs and quasars are selected as sources with a marginally high BP/RP excess factor (phot_bp_rp_excess_factor), which is sensitive to source extent, limiting our search to high-redshift quasars. For the second part of the catalog, additional filters on measured parallax and near-neighbor statistics are applied to diminish the propagation of the remaining stellar contaminants. The estimated rate of the positives (double or multiple sources) is 98%, and the estimated rate of dual (physically related) quasars is greater than 54%. A few dozen serendipitously found objects of interest are discussed in more detail, including known and new lensed images, planetary nebulae, young IR stars of peculiar morphology, and quasars with catastrophic redshift errors in SDSS.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Hot Circumsingle Disks Drive Binary Black Hole Mergers in Active Galactic Nucleus Disks

Abstract Binary black hole (BBH) mergers, particularly those with component masses in the pair-instability gap, may be produced by hierarchical mergers in the disks surrounding Active Galactic Nuclei (AGNs). While the interaction of an embedded BBH with an AGN disk is typically assumed to facilitate a merger, recent high-resolution hydrodynamical simulations challenge this assumption. However, these simulations often have simplified treatments for gas thermodynamics. In this work, we model the possible consequence of various feedback from an embedded BBH with a simple model that maintains an enhanced temperature profile around each binary component. We show that when the minidisks around each BH become hotter than the background by a factor of three, the BBH orbital evolution switches from expansion to contraction. By analyzing the gravitational torque profile, we find that this change in direction is driven by a weakening of the minidisk spirals and their positive torque on the binary. Our results highlight the important role of thermodynamics around BBHs and its effect on their orbital evolution, suggesting that AGN disks could be efficient factories for BBH mergers.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Radiative Reconnection-powered TeV Flares from the Black Hole Magnetosphere in M87

Abstract Active galactic nuclei in general, and the supermassive black hole in M87 in particular, show bright and rapid gamma-ray flares up to energies of 100 GeV and above. For M87, the flares show multiwavelength components, and the variability timescale is comparable to the dynamical time of the event horizon, suggesting that the emission may come from a compact region near the nucleus. However, the emission mechanism for these flares is not well understood. Recent high-resolution general-relativistic magnetohydrodynamic simulations show the occurrence of episodic magnetic reconnection events that can power flares near the black hole event horizon. In this work, we analyze the radiative properties of the reconnecting current layer under the extreme plasma conditions applicable to the black hole in M87 from first principles. We show that abundant pair production is expected in the vicinity of the reconnection layer, to the extent that the produced secondary pair plasma dominates the reconnection dynamics. Using analytic estimates backed by two-dimensional particle-in-cell simulations, we demonstrate that in the presence of strong synchrotron cooling, reconnection can produce a hard power-law distribution of pair plasma imprinted in the outgoing synchrotron (up to a few tens of MeV) and the inverse-Compton signal (up to TeV). We produce synthetic radiation spectra from our simulations, which can be directly compared with the results of future multiwavelength observations of M87* flares.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Simultaneous Millimeter-wave, Gamma-Ray, and Optical Monitoring of the Blazar PKS 2326-502 during a Flaring State

Including millimeter-wave data in multiwavelength studies of the variability of active galactic nuclei (AGN) can provide insights into AGN physics that are not easily accessible at other wavelengths. We demonstrate in this work the potential of cosmic microwave background (CMB) telescopes to provide long-term, high-cadence millimeter-wave AGN monitoring over large fractions of sky. We report on a pilot study using data from the SPTpol instrument on the South Pole Telescope (SPT), which was designed to observe the CMB at arcminute and larger angular scales. Between 2013 and 2016, SPTpol was used primarily to observe a single 500 deg2 field, covering the entire field several times per day with detectors sensitive to radiation in bands centered at 95 and 150 GHz. We use SPT 150 GHz observations to create AGN light curves, and we compare these millimeter-wave light curves to those at other wavelengths, in particular γ-ray and optical. In this Letter, we focus on a single source, PKS 2326-502, which has extensive, day-timescale monitoring data in gamma-ray, optical, and now millimeter-wave between 2013 and 2016. We find PKS 2326-502 to be in a flaring state in the first 2 yr of this monitoring, and we present a search for evidence of correlated variability between millimeter-wave, optical R-band, and γ-ray observations. This pilot study is paving the way for AGN monitoring with current and upcoming CMB experiments such as SPT-3G, Simons Observatory, and CMB-S4, including multiwavelength studies with facilities such as Vera C. Rubin Observatories Large Synoptic Survey Telescope.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

TRACER-CAT-LANL Aerosol Optics and Chemical Speciation - CCN

Aerosol size distribution, optical properties, and speciation data collected in La Port TX, during TRACER-CAT-LANL, July 2022, with basic trace gas measurements. All sampling was conducted with an identical aerosol inlet as the standard ARM-AOS systems. The TRacking Aerosol Convection interactions ExpeRiment Carbonaceous Aerosols Thrust by Los Alamos National Laboratory (TRACER-CAT-LANL, July 2022) was designed to complement the larger ARM TRACER science goals to understand convective cloud lifecycles and aerosol-convection interactions. TRACER-CAT-LANL is focused on understanding the relationship between particle composition and light absorption and the influence of water uptake on this relationship. This aerosol and trace gas data can be used to understand the relationship between particle composition and light absorption and the influence of water uptake on this relationship. Instruments Include: Picarro GHG Photoacoustic Soot Spectrometer (PASS-3) Humidified-cavity attenuated phase shift-single scattering albedo particulate matter monitor (H-CAPS-PMSSA) Soot Particle Aerosol Mass Spectrometer (SPAMS) Single-Particle Soot Photometer (SP2) Cloud Condensation Nuclei Counter (CCNc) Aerodynamic Particle Sizer (APS) Scanning Mobility Particle Sizer (SMPS)

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Genetically Controlled Iron Oxide Biomineralization in Encapsulin Nanocompartments for Magnetic Manipulation of a Mammalian Cell Line

Magnetic nanoparticles have proven invaluable for biomechanical investigations due to their ability to exert localized forces. However, cellular delivery of exogenous magnetic agents often results in endosomal entrapment, thereby limiting their utility for manipulating subcellular structures. This study characterizes and exploits fully genetically controlled biomineralization of iron-oxide cores inside encapsulin nanocompartments to enable magnetic-activated cell sorting (MACS) and magnetic cell manipulation. The fraction of MACS-retained cells showed substantial overexpression of encapsulins and exhibited both para- and ferrimagnetic responses with magnetic moments of 10 -15 A m 2 per cell, comparable to standard exogenous labels for MACS. Electron microscopy revealed that MACS-retained cells contained densely packed agglomerates of ≈30 nm iron oxide cores consisting of ultrafine quasicrystalline ordered nuclei within an amorphous matrix of iron, oxygen, and phosphorus. Scanning transmission X-ray microscopy, X-ray absorption spectroscopy, and Raman microspectroscopy confirmed that the iron-oxide species are consistent with ferric oxide (Fe 2 O 3 ). In addition, the encapsulin-overexpressing MACS-retained cells can be manipulated by a magnetic needle and regrown in patterns determined by magnetic gradients. This study demonstrates that the formation of quasicrystalline iron oxide with mixed para/ferrimagnetic behavior in the cytosol of mammalian cells enables magnetic manipulation without the delivery of exogenous agents.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Manipulating the Assembly and Architecture of Fibrillar Silk

Silk is a unique and exceptionally strong biological material. However, no synthetic method has yet come close to replicating the properties of natural silk. This shortfall is attributed to an insufficient understanding of both silk nanofibril structure and the mechanism of formation. Here in situ atomic force microscopy (AFM) and photo-induced force microscopy (PiFM) is utilized to investigate the formation process and define the basic structural paradigm of individual silk nanofibrils. By visualizing the multistage process of silk nanofibril formation, the importance of conformational transformations along the assembly pathway is revealed. Unfolded silk structures initially accumulate into amorphous clusters, which then evolve into crystal nuclei via conformational transformation into β-crystallites. Nanofibril elongation then occurs through the attachment of silk molecules at a single end of the nanofibril tip; this is facilitated through the formation of a new amorphous cluster that then repeats the aforementioned conformational transformation. However, enzymatic digestion of the amorphous regions leads to direct, rapid elongation of β-crystalline fibers. These findings imply that the energy landscape is characterized by shallow minima associated with intermediate states, which can be eliminated by introducing β-crystallites, and motivate research into the directed modification of the silk assembly pathway to select for features beneficial to specific applications.

36 MATERIALS SCIENCE↗