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At least 1,117 records · Page 62
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Calibration and Validation of a Mechanistic COVID-19 Model for Translational Quantitative Systems Pharmacology – A Proof-of-Concept Model Development for Remdesivir

With the ongoing global pandemic of coronavirus disease 2019 (COVID-19), there is an urgent need to accelerate the traditional drug development process. Many studies identified potential COVID-19 therapies based on promising nonclinical data. However, the poor translatability from nonclinical to clinical settings has led to failures of many of these drug candidates in the clinical phase. In this study, we propose a mechanism-based, quantitative framework to translate nonclinical findings to clinical outcome. Adopting a modularized approach, this framework includes an in silico disease model for COVID-19 (virus infection and human immune responses) and a pharmacological component for COVID-19 therapies. Here, the disease model was able to reproduce important longitudinal clinical data for patients with mild and severe COVID-19, including viral titer, key immunological cytokines, antibody responses, and time courses of lymphopenia. Using remdesivir as a proof-of-concept example of model development for the pharmacological component, we developed a pharmacological model that describes the conversion of intravenously administered remdesivir as a prodrug to its active metabolite nucleoside triphosphate through intracellular metabolism and connected it to the COVID-19 disease model. After being calibrated with the placebo arm data, our model was independently and quantitatively able to predict the primary endpoint (time to recovery) of the remdesivir clinical study, Adaptive Covid-19 Clinical Trial (ACTT). Our work demonstrates the possibility of quantitatively predicting clinical outcome based on nonclinical data and mechanistic understanding of the disease and provides a modularized framework to aid in candidate drug selection and clinical trial design for COVID-19 therapeutics.

60 APPLIED LIFE SCIENCES↗
NASA NTRS2002

Decadal Changes in Global Ocean Annual Primary Production

The Sea-viewing Wide Field-of-View Sensor (SeaWiFS) has produced the first multi-year time series of global ocean chlorophyll observations since the demise of the Coastal Zone Color Scanner (CZCS) in 1986. Global observations from 1997-present from SeaWiFS combined with observations from 1979-1986 from the CZCS should in principle provide an opportunity to observe decadal changes in global ocean annual primary production, since chlorophyll is the primary driver for estimates of primary production. However, incompatibilities between algorithms have so far precluded quantitative analysis. We have developed and applied compatible processing methods for the CZCS, using modern advances in atmospheric correction and consistent bio-optical algorithms to advance the CZCS archive to comparable quality with SeaWiFS. We applied blending methodologies, where in situ data observations are incorporated into the CZCS and SeaWiFS data records, to provide improvement of the residuals. These re-analyzed, blended data records provide maximum compatibility and permit, for the first time, a quantitative analysis of the changes in global ocean primary production in the early-to-mid 1980's and the present, using synoptic satellite observations. An intercomparison of the global and regional primary production from these blended satellite observations is important to understand global climate change and the effects on ocean biota. Photosynthesis by chlorophyll-containing phytoplankton is responsible for biotic uptake of carbon in the oceans and potentially ultimately from the atmosphere. Global ocean annual primary decreased from the CZCS record to SeaWiFS, by nearly 6% from the early 1980s to the present. Annual primary production in the high latitudes was responsible for most of the decadal change. Conversely, primary production in the low latitudes generally increased, with the exception of the tropical Pacific. The differences and similarities of the two data records provide evidence of how the Earth's climate may be changing and how ocean biota respond. Furthermore, the results have implications for the ocean carbon cycle.

Gregg, Watson↗
DOE OSTI2024

Tracking the topology of neural manifolds across populations

Neural manifolds summarize the intrinsic structure of the information encoded by a population of neurons. Advances in experimental techniques have made simultaneous recordings from multiple brain regions increasingly commonplace, raising the possibility of studying how these manifolds relate across populations. However, when the manifolds are nonlinear and possibly code for multiple unknown variables, it is challenging to extract robust and falsifiable information about their relationships. We introduce a framework, called the method of analogous cycles, for matching topological features of neural manifolds using only observed dissimilarity matrices within and between neural populations. We demonstrate via analysis of simulations and in vivo experimental data that this method can be used to correctly identify multiple shared circular coordinate systems across both stimuli and inferred neural manifolds. Conversely, the method rejects matching features that are not intrinsic to one of the systems. Further, as this method is deterministic and does not rely on dimensionality reduction or optimization methods, it is amenable to direct mathematical investigation and interpretation in terms of the underlying neural activity. We thus propose the method of analogous cycles as a suitable foundation for a theory of cross-population analysis via neural manifolds.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

BETO 2021 Peer Review - Algal Biofuels Techno-Economic Analysis 1.3.5.200

The objective of NREL's Algal Biofuel Techno-Economic Analysis (TEA) project is to provide process modeling and analysis to support Algae Program activities, utilizing TEA models to relate key process parameters with overall economics for cultivation, processing, and conversion of algal biomass to fuels and coproducts. By quantifying economic implications of key process metrics, TEA models highlight the technical requirements to achieve future program cost goals as well as enabling a means to track progress towards these goals. This project provides high impact and relevance though generation of critical cost data tied to funded research, with our analyses subsequently exercised by BETO to guide program plans, FOA priorities, and other directives. This includes costs for both algal biomass production and downstream conversion, most notably to support BETO's fuel cost targets below $2.5/GGE by 2030. To mitigate a key risk/challenge in constraining our work to academic analyses rooted only in future projections, our work also seeks to provide near-term value to today's algae industry through frequent industry engagement, while maintaining close ties with other BETO collaborators. This project has made numerous accomplishments since the 2019 peer review, including a continued focus on opportunities for value-added products, with related analyses for new pathway opportunities to achieve BETO cost goals and notable State-of-Technology (SOT) improvements over prior cost benchmarks.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗
DOE OSTI2023

MASK4 Test Campaign for Sandia WaveBot Device

This data and report details the findings from a wave tank test focused on production of useful work of a wave energy converter (WEC) device. The experimental system and test were specifically designed to validate models for power transmission throughout the WEC system. Additionally, the validity of co-design informed changes to the power take-off (PTO) were assessed and shown to provide the expected improvements in system performance. These data describe the "MASK4" wave tank test of the Sandia WaveBot device. The WaveBot device has been tested a number of times in different permutations at the US Navy's Maneuvering and Sea Keeping (MASK) basin. Each test in this series is referred to as MASK1, MASK2, etc. The WaveBot device was first tested in one degree of freedom (heave) in 2016. This MASK1 test focused primarily on system identification and modeling. After MASK1, major modifications were performed to improve the overall real-time control and measurement system, improve the heave drive train, and add surge and pitch degrees of freedom. The second set of testing, which was broken up in to two stages: MASK2A and MASK2B, focused on bench testing and closed-loop control performance as well as nonlinear modeling. MASK3 then focused on multi-input, multi-output modeling and control for maximization of electrical power. The attached report presents the results from MASK4, which focuses on detailed modeling of the power conversion chain and validation co-design principles by way of the introduction of a magnetic spring. The test log, report, and data from the MASK4 test of the WaveBot augmented with a tunable magnetic spring. Processing codes can be found at the Github link below.

16 TIDAL AND WAVE POWER↗
NASA NTRS2014

A Revised Calibration Function and Results for the Phoenix Mission TECP Relative Humidity Sensor

The original calibration function of the R(sub H) sensor on the Phoenix Thermal and Electrical Conductivity Sensor (TECP) has been revised in order to extend the range of the valid calibration, and to improve accuracy. The original function returned non-physical R(sub H) values at the lowest temperatures. To resolve this, and because the original calibration was performed against a pair of hygrometers that measured frost point (T(sub f)), the revised calibration equation is also cast in terms of frost point. Because of the complexity of maintaining very low temperatures and high R(sub H) in the laboratory, no calibration data exists at T is greater than 203K. However, sensor response during the mission was smooth and continuous down to 181 K. Therefore we have opted to include flight data in the calibration data set; selection was limited to data acquired during periods when the atmosphere is known to have been saturated. T(sub f) remained below 210 K throughout the mission(P is greater than 0.75 Pa). R(sub H), conversely, ranged from 1 to well under 0.01 diurnally, due to approximately 50 K temperature variations. To first order, both vapor pressure and its variance are greater during daylight hours. Variance in overnight humidity is almost entirely explained by temperature, while atmospheric turbulence contributes substantial variance to daytime humidity. Likewise, data gathered with the TECP aloft reflect higher H2O abundances than at the surface, as well as greater variance. There is evidence for saturation of the atmosphere overnight throughout much of the mission. In virtually every overnight observation, once the atmosphere cooled to T(sub f), water vapor begins to decrease, and tracks air temperature. There is no evidence for substantial decreases in water vapor prior to saturation, as expected for adsorptive exchange. Likewise, there is no evidence of local control of vapor by phases such as perchlorate hydrates hydrated minerals. The daytime average H2O pressure does not change substantially over the course of the mission, although the H2O column abundance varies by a factor of 2. Column abundances calculated from TECP data are lower than orbital measurements if one assumes that H2O is uniformly mixed through a single scale height. These results argue that the vertical distribution of H2O begins to change well in advance of surface concentrations as northern autumn approaches.

Phoenix Thermal and Electrical Conductivity Sensor↗
NASA NTRSDate not supplied

The Development and Deployment of Machine Learning Models for Aircraft Engine Concept Assessment

In today's competitive landscape, the effective development and utilization of machine-learning (ML) applications have become imperative across various sectors. This study presents an outline of the procedure involved in creating and implementing ML models for conceptualizing and evaluating aircraft engines. These models leverage supervised deep-learning algorithms to analyze patterns within an open-source repository containing data on both production and research conventional turbofan engines. The main areas of focus encompass crucial engine parameters like thrust-specific fuel consumption (TSFC), engine weight, engine diameter, and turbomachinery stage counts. While the creation of ML models is fundamental for their utilization, ensuring their seamless deployment holds equal significance. To address this aspect, a conversational AI chatbot is constructed, utilizing natural language processing (NLP) techniques, to facilitate the deployment of these ML models. The comprehensive workflow encompasses several key stages: gathering and enhancing engine data, training and cross validating the ML models, testing and evaluating their performance, and finally, deploying, monitoring, and updating the ML models. By following this systematic approach, the aim is to streamline the development and deployment process of ML models tailored for aircraft engine assessment.

Development↗
NASA NTRSDate not supplied

The Development and Deployment of Machine Learning Models for Aircraft Engine Concept Assessment

In today's competitive landscape, the effective development and utilization of machine-learning (ML) applications have become imperative across various sectors. This study presents an outline of the procedure involved in creating and implementing ML models for conceptualizing and evaluating aircraft engines. These models leverage supervised deep-learning algorithms to analyze patterns within an open-source repository containing data on both production and research conventional turbofan engines. The main areas of focus encompass crucial engine parameters like thrust-specific fuel consumption (TSFC), engine weight, engine diameter, and turbomachinery stage counts. While the creation of ML models is fundamental for their utilization, ensuring their seamless deployment holds equal significance. To address this aspect, a conversational AI chatbot is constructed, utilizing natural language processing (NLP) techniques, to facilitate the deployment of these ML models. The comprehensive workflow encompasses several key stages: gathering and enhancing engine data, training and cross validating the ML models, testing and evaluating their performance, and finally, deploying, monitoring, and updating the ML models. By following this systematic approach, the aim is to streamline the development and deployment process of ML models tailored for aircraft engine assessment.

Development↗
DOE OSTI2022

Genetic programming for interpretable, data-driven continuum damage models.

The damage mechanisms that lead to failure in engineering alloys have been studied extensively, but converting this knowledge into constitutive models that are suitable for engineering-scale analysis remains a challenge. Evolution laws for continuum damage have been developed in the past and have proven effective but suffer from many non-physical assumptions that inhibit the overall accuracy of the model. Further, the assumptions inherent in these existing models prevent them from being applicable to a broad class of materials. At the same time, computational models of fine-scale damage mechanisms continue to advance making it tractable to generate large training data sets through computer simulation. Data-driven machine learning approaches can leverage these data sets to avoid making limiting assumptions, and instead produce models directly from the results of microstructural simulations and/or experiments. Many of these machine learning approaches are rapid and accurate, but they offer little to no insight into the underlying relationships among state variables being discovered. Conversely, genetic programming symbolic regression (GPSR) is a machine learning method that produces analytic expressions relating the state variables, allowing maximal insight and interpretability. To that end, we propose using GPSR as a data-driven method of obtaining microstructurally informed continuum damage models. Data is generated using microstructural simulations of damage evolution, parameterized over microstructural statistics (i.e., pore shape) and nominally applied deformations. Analytic expressions for damage evolution are obtained from the data using GPSR, and these expressions are then utilized within a continuum constitutive model. Overall, this approach is a promising method of automatically obtaining analytic relations describing constitutive phenomena in a material.

Buche, Michael Robert↗
NASA NTRS1983

Ocean color algorithm for remote sensing of chlorophyll

An algorithm for the remote detection of chlorophyll a in the ocean was tested during a Nantucket Shoals experiment conducted by NASA. A set of Multichannel Ocean Color Sensor (MOCS) data selected from one flight for each of the two altitudes flown was used to calibrate the algorithm for chlorophyll a concentration. The equations were then applied to all unsaturated MOCS data collected during the 8-day experiment to generate contour maps of chlorophyll a concentration over the shoals. One additional flight was conducted away from the shoals both on and off the Continental Shelf. Although no solar elevation or environmental corrections were made to the original conversions, the equations in these tests determined chlorophyll a concentrations to an accuracy better than 1.0 micron g/L despite the fact that the solar elevation varied between 20 deg and 56 deg during the data collection periods of the experiments.

Grew, G. W.↗
DOE OSTI2022

Organic Photovoltaic Efficiency Predictor: Data-Driven Models for Non-Fullerene Acceptor Organic Solar Cells

In the design of organic solar cells, there has been a need for materials with high power conversion efficiencies. Scharber’s model is commonly used to predict efficiency; however, it exhibits poor performance with new non-fullerene acceptor (NFA) devices, since it was designed for fullerene-based devices. In this work, an empirical model is proposed that can be a more accurate alternative for NFA organic solar cells. Additionally, many screening studies use computationally expensive methods. A model based on using semiempirical simplified time-dependent density functional theory (sTD-DFT) as an alternative method can accelerate the calculations and yield a similar accuracy. The models presented in this paper, termed organic photovoltaic efficiency predictor (OPEP) models, have shown significantly lower errors than previous models, with OPEP/B3LYP yielding errors of 1.53% and OPEP/sTD- DFT of 1.55%. As a result, the proposed computational models can be used for the fast and accurate screening of new high-efficiency NFAs/donor pairs.

14 SOLAR ENERGY↗
NASA NTRSDate not supplied

A Crew Seat for Human Exploration in Multiple Gravity Environments

This work attempts to develop a single crew seating solution that is applicable across a range of gravity environments encountered by spacecraft proposed in several conceptual spacecraft architectures. All of these spacecraft will need to provide some sort of stationary accommodation for the crew for performing various activities such as work in science laboratories, maintenance and repair facilities, medical care facilities, and spacecraft operations centers, as well as for basic habitation in crew quarters, entertainment / relaxation facilities, and crew dining facilities. Depending on the spacecraft or architecture, this stationary accommodation may be experienced continuously in microgravity, such as would be the case for the Deep Space Exploration Vehicle. Alternately, it could be in continuous lunar or Martian gravity, such as the Common Habitat base camps. It could experience fractional gravity, such as a Pressurized Rover for In-Space Missions at a Near Earth Asteroid or one of the Martian moons. It could alternate between artificial gravity and microgravity, such as the Nautilus-X. It could alternate between microgravity and lunar or Martian gravity, such as the SpaceX Starship Human Landing System or the Blue Origin Blue Moon Block 2 Human Landing System. Or it could be in continuous Earth gravity, such as ground trainer systems. Prior human spaceflight systems for stationary accommodation have been focused on microgravity applications. These systems have their own limitations and cannot be used in a gravity environment. A public crowdsourcing campaign generated dozens of ideas, which ultimately generated a Gecko Mobility Aids system for crew translation and the Multi-Gravity Crew Seat (MGCS) for stationary accommodation. The MGCS functions in gravity as a traditional terrestrial seat, performing functions of load for the overall body and forearms, as well as head and neck load relief while positioning the body within range of an intended task. In microgravity, the MGCS functions as a body restraint, securing the body against inadvertent drifting by applying a restraining pressure at the front and back of the thighs, shoulders, and back. The initial MGCS concept was developed in a NASA hackathon and was refined through a review of dozens of terrestrial seating styles. Additionally, a review of anthropometry and biomechanics data related to the neutral body posture was conducted to help inform the microgravity configuration of the MGCS. A series of CAD models were iteratively developed, with subject matter expert reviews leading to design improvements. A scale model was constructed and used with a humanoid model to demonstrate MGCS accommodation of a human-like body in both gravity and microgravity modes. Work to develop a full-scale protype of the MGCS is discussed, including design and fabrication of the headrest, arm rest, seat back, seat pan, seat base, and the conversion mechanisms. A 1-g human-in-the-loop evaluation of the prototype assessed the acceptability of performing seated activities in the MGCS, collecting data on the usability, comfort, and ease of ingress/egress. Based on the evaluation results, design modifications needed for reduced gravity testing are documented and initial work is indicated for a reduced gravity test plan.

Restraints and Mobility Aids↗
NASA NTRS2010

Stirling Convertor Extended Operation Testing and Data Analysis at Glenn Research Center

Extended operation of Stirling convertors is essential to the development of radioisotope power systems and their potential use for longduration missions. To document the reliability of the convertors, regular monitoring and analysis of the extended operation data is particularly valuable, allowing us to better understand and quantify long-life characteristics of the convertors. Furthermore, investigation and comparison of the extended operation data to baseline performance data provides an opportunity to understand system behavior should any off-nominal performance occur. Glenn Research Center (GRC) has tested 16 Stirling convertors under 24-hr unattended extended operation, including four that have operated in a thermal vacuum environment and two that are operating in the Advanced Stirling Radioisotope Generator Engineering Unit. Ten of the sixteen convertors are the Advanced Stirling Convertors (ASC) developed by Sunpower, Inc. with GRC. These are highly efficient (conversion efficiency of up to 38 percent for the ASC-1), low-mass convertors that have evolved through technologically progressive convertor builds. Six convertors at GRC are Technology Demonstration Convertors from Infinia Corporation. They have achieved greater than 27 percent conversion efficiency and have accumulated over 185,000 of the total 265,000 hr of extended operation at GRC. This paper presents the extended operation testing and data analysis of free-piston Stirling convertors at NASA GRC as well as how these tests have contributed to the Stirling convertor s progression toward flight.

Cornell, Peggy A.↗
NASA NTRSDate not supplied

Outer Planet Global Reference Atmospheric Model (GRAM) Upgrades

Introduction: The Global Reference Atmospheric Model (GRAM) is one of the most widely used engineering models of planetary atmospheres. The GRAM upgrades are being developed by NASA Marshall Space Flight Center and NASA Langley Research Center. This presentation will provide details regarding the upgrades to the existing GRAMs, the development of new GRAMs, and the ongoing objectives, tasks, and milestones related to the GRAM upgrades funded by the NASA Science Mission Directorate (SMD). GRAM: The GRAMs are engineering-oriented atmospheric models that estimate mean values and statistical variations of the atmospheric properties for numerous planetary destinations. They provide mean values and variability for any point in the atmosphere as well as seasonal, geographic, and altitude variations. GRAM outputs include atmospheric density, temperature, pressure, winds, and chemical composition along a user-defined path. They are extensively used by the engineering community because of their ability to create realistic dispersions. GRAMs have been integrated into high fidelity flight dynamic simulations of launch, entry, descent and landing (EDL), aerobraking and aerocapture. GRAMs are currently available for Earth, Mars, Venus, Neptune, Titan, and Uranus. Outer Planet GRAM Upgrade Status: Code Modernization. The outer planet GRAMs have been rearchitected from Fortran to a common object-oriented C++ framework called the GRAM Suite. This new architecture creates a common GRAM library of data models and utilities. The first C++ releases of the rearchitected legacy outer planet GRAMs (Neptune and Titan-GRAM) are straight conversions from the latest Fortran version. Model Upgrades. The focus of the model upgrade task is to improve the atmosphere models in the existing GRAMs and to establish a foundation for developing GRAMs for additional destinations. The GRAM ephemeris has been upgraded to the NASA Navigation and Ancillary Information Facility (NAIF) SPICE toolkit (version N0066). The calculation of the speed of sound has also been improved in the GRAMs. In FY20, the GRAM project established a contract with Hampton University to develop empirical global models for Jupiter, Saturn, Uranus, Neptune, and Titan. Upgraded Outer Planet GRAM Releases. GRAM Suite Version 1.0 was released in May 2020 and contains the rearchitected Neptune-GRAM, including the common GRAM framework and planet–specific code. GRAM Suite Version 1.1 was released in September 2020 and added the rearchitected Titan-GRAM to the GRAM Suite. A User Guide and Programmer’s Manual are released with all GRAMs. New Outer Planet GRAM Releases. New GRAMs have been developed for Uranus and Jupiter. Uranus-GRAM is based on the NASA Ames Research Center (ARC) Uranus Atmospheric Model [1,2] and was released in GRAM Suite Version 1.2 in July 2021. Jupiter-GRAM is based on Galileo probe Atmospheric Structure Instrument (ASI) data from Seiff et al. [3] Saturn-GRAM is also under development. Both Jupiter and Saturn-GRAM will be released in future versions of the GRAM Suite. Conclusions: GRAMs are vital and frequently used toolsets. Releases of the GRAM Suite, upgrades of the existing planetary GRAMs, and development of new planetary GRAMs are ongoing. Titan-GRAM atmosphere model upgrades will be included in the next phase of GRAM tasks. References: [1] Allen Jr., G.A. et al. (2014) 11th International Planetary Probe Workshop, Abstract #8023. [2] Allen Jr., G.A. et al. (2014) Workshop on the Study of the Ice Giant Planets, Abstract #2001. [3] Seiff, A. et al. (1998) JGR, 103, 22,857 -22,889. Acknowledgments: The authors gratefully acknowledge support from the NASA SMD.

atmospheric models↗
NASA NTRS1984

Radiometric Calibration and Geocoded Precision Processing of LANDSAT-4 Multispectral Scanner Products by the Canada Centre for Remote Sensing

Inherent in the method used by CCRS for the radiometric calibration of LANDSAT-4 MSS data is the possibility for the user to convert the corrected digital values to the absolute scene radiance of the target under observation. The generation of the constants needed for this final conversion requires both the pre-launch and post-launch radiometric calibration constants as supplied by NASA. Results of some preliminary comparative studies of the radiometric properties of the LANDSAT-4 MSS versus earlier satellites in the LANDSAT series are presented as well as early observations on the stability of the calibration data, within one scene, within one orbit, and over a period of several months. Residual striping in the corrected products is estimated. The method used to perform precision processing of the LANDSAT MSS data for generating geocoded or map compatible LANDSAT MSS products in the Unviersal Transverse Mercator projection is also reviewed. LANDSAT-4 MSS precision processed products are evaluated for geodetic accuracy, and are compared to similar products from the previous LANDSAT satellites to assess the orbit independent registration accuracy.

Murphy, J.↗
DOE OSTI2020

Water content of carbon dioxide at hydrate forming conditions

There is an interest to ensure sub-saturated water content in lines containing carbon dioxide in applications such as enhanced oil recovery and carbon sequestration, to reduce risks of hydrate blockage and corrosion. The water content of carbon dioxide at various temperatures and pressures has been measured in the past, but there is no consistent set of measurements that could be used for carbon dioxide storage and transportation design work. The solubility of water in a carbon dioxide rich gas phase at hydrate forming conditions was measured in this work. Pressures ranged from 12.06 to 29.30 bar along two isotherms, 1 °C and -7 °C, all within the gaseous carbon dioxide and hydrate stability zone. For the first time in these types of measurements, the solid phase was also characterized and confirmed to be carbon dioxide hydrate via X-ray computed tomography, simultaneous with water content measurements of the gas phase. Once carbon dioxide hydrate conversion had reached a maximum value (65% estimated by X-ray computed tomography), the equilibrium water content was measured. Prior to reaching this maximum carbon dioxide hydrate conversion, the water content in carbon dioxide was observed to decrease as liquid water converted to carbon dioxide hydrate. Furthermore, this slow conversion to hydrate, metastability of the hydrate phase, or unexpected phases may be responsible for the large discrepancy between prior data sets for similar carbon dioxide water content measurements.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

RAIS ICRP 107 Dose Conversion Factors for Radionuclides

Radionuclide dose conversion factors, also known as dose coefficients, are used for radionuclide dose calculations. Routes included are oral, inhalation, and external exposure. Separate datasets are maintained for ICRP 107, 60, and 30. The dose conversion factors from the ICRP 107 (https://rais.ornl.gov/cgibin/tools/TOX_search?select=rad107) are updated values from FGR 13 supplement using ICRP 107 decay data. The derivation and values are in “Calculations of Slope Factors and Dose Coefficients” (ORNL, 2014).

Noto, Katie [Oak Ridge National Laboratory (ORNL),↗
DOE OSTI2023

HipBone: A performance-portable graphics processing unit-accelerated C++ version of the NekBone benchmark

We present hipBone, an open-source performance-portable proxy application for the Nek5000 (and NekRS) computational fluid dynamics applications. HipBone is a fully GPU-accelerated C++ implementation of the original NekBone CPU proxy application with several novel algorithmic and implementation improvements which optimize its performance on modern fine-grain parallel GPU accelerators. Our optimizations include a conversion to store the degrees of freedom of the problem in assembled form in order to reduce the amount of data moved during the main iteration and a portable implementation of the main Poisson operator kernel. We demonstrate near-roofline performance of the operator kernel on three different modern GPU accelerators from two different vendors. We present a novel algorithm for splitting the application of the Poisson operator on GPUs which aggressively hides MPI communication required for both halo exchange and assembly. Our implementation of nearest-neighbor MPI communication then leverages several different routing algorithms and GPU-Direct RDMA capabilities, when available, which improves scalability of the benchmark. We demonstrate the performance of hipBone on three different clusters housed at Oak Ridge National Laboratory, namely, the Summit supercomputer and the Frontier early-access clusters, Spock and Crusher. Our tests demonstrate both portability across different clusters and very good scaling efficiency, especially on large problems.

Computer Science↗