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At least 1,099 records · Page 61
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Lectures on statistical mechanics

Presented here is a transcription of the lecture notes from Professor Allan N. Kaufman’s graduate statistical mechanics course Physics 212A and 212B at the University of California Berkeley from the 1972–1973 academic year. 212A addressed equilibrium statistical mechanics with topics: fundamentals (micro-canonical and sub-canonical ensembles, adiabatic law and action conservation, fluctuations, pressure, and virial theorem), classical fluids and other systems (equation of state, deviations from ideality, virial coefficients and van der Waals potential, canonical ensemble and partition function, quasistatic evolution, grand-canonical ensemble and partition function, chemical potential, simple model of a phase transition, quantum virial expansion, numerical simulation of equations of state, and phase transition), chemical equilibrium (systems with multiple species and chemical reactions, law of mass action, Saha equation, chemical equilibrium including ionization and excited states), and long-range interactions (including Coulomb, dipole, and gravitational interactions, Debye–Hückel theory, and shielding). 212B addressed nonequilibrium statistical mechanics with topics: fundamentals (definitions: realizations, moments, characteristic function, and discrete variables), Brownian motion (Langevin equation, fluctuation–dissipation theorem, spatial diffusion, Boltzmann’s H-theorem), Liouville and Klimontovich equations, Landau equation (derivation, elaboration, and H-theorem, and irreversibility), Markov processes and Fokker–Planck equation (derivations of the Fokker–Planck equation and a master equation), linear response and transport theory (linear Boltzmann equation, linear response theory of Kubo and Mori, relation of entropy production to electrical conductivity, transport relations and coefficients, normal mode solutions of the transport equations, sketch of a generalized Langevin equation method for transport theory), and an introduction to nonequilibrium quantum statistical mechanics.

plasma dynamics↗
DOE OSTI2022

Climate and hydraulic traits interact to set thresholds for liana viability

Lianas, or woody vines, and trees dominate the canopy of tropical forests and comprise the majority of tropical aboveground carbon storage. These growth forms respond differently to contemporary variation in climate and resource availability, but their responses to future climate change are poorly understood because there are very few predictive ecosystem models representing lianas. We compile a database of liana functional traits (846 species) and use it to parameterize a mechanistic model of liana-tree competition. The substantial difference between liana and tree hydraulic conductivity represents a critical source of inter-growth form variation. Here, we show that lianas are many times more sensitive to drying atmospheric conditions than trees as a result of this trait difference. Further, we use our competition model and projections of tropical hydroclimate based on Representative Concentration Pathway 4.5 to show that lianas are more susceptible to reaching a hydraulic threshold for viability by 2100.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Uncertainty reduction in residual stress measurements by an optimised inverse solution using nonconsecutive polynomials

Many destructive methods for measuring residual stresses such as the slitting method require an inverse analysis to solve the problem. The accuracy of the result as well as an uncertainty component (the model uncertainty) depends on the basis functions used in the inverse solution. The use of a series expansion as the basis functions for the inverse solution was analysed in a previous work for the particular case where functions orders grew consecutively. The present work presents a new estimation of the model uncertainty and a new improved methodology to select the final basis functions for the case where the basis is composed of polynomials. Including nonconsecutive polynomial orders in the basis generates a larger space of possible solutions to be evaluated and allows the possibility to include higher-order polynomials. The paper includes a comparison with two other inverse analyses methodologies applied to synthetically generated data. With the new methodology, the final error is reduced and the uncertainty estimation improved.

36 MATERIALS SCIENCE↗
DOE OSTI2022

merlin , an improved framework for the reconstruction of high-quality genome-scale metabolic models

Abstract Genome-scale metabolic models have been recognised as useful tools for better understanding living organisms’ metabolism. merlin (https://www.merlin-sysbio.org/) is an open-source and user-friendly resource that hastens the models’ reconstruction process, conjugating manual and automatic procedures, while leveraging the user's expertise with a curation-oriented graphical interface. An updated and redesigned version of merlin is herein presented. Since 2015, several features have been implemented in merlin, along with deep changes in the software architecture, operational flow, and graphical interface. The current version (4.0) includes the implementation of novel algorithms and third-party tools for genome functional annotation, draft assembly, model refinement, and curation. Such updates increased the user base, resulting in multiple published works, including genome metabolic (re-)annotations and model reconstructions of multiple (lower and higher) eukaryotes and prokaryotes. merlin version 4.0 is the only tool able to perform template based and de novo draft reconstructions, while achieving competitive performance compared to state-of-the art tools both for well and less-studied organisms.

Capela, João (ORCID:0000000212352922)↗
DOE OSTI2026

Data for Impact of Vertical and Seasonal Variation in Leaf Traits on Simulating Soybean Canopy Photosynthesis via 1D and 3D Modeling

Accurate modeling of photosynthesis is crucial for predicting crop productivity and quantifying the carbon cycle in agroecosystems. Leaf traits are essential inputs for modeling canopy photosynthesis. Yet, many existing models still use fixed plant functional type (PTF)-based values to parameterize leaf traits under a big-leaf or two-big-leaf assumption, neglecting their vertical profiles and seasonal changes. This simplification may introduce significant uncertainties in estimating gross primary productivity (GPP). In this study, we simulated soybean GPP and tested the effects of vertical and seasonal variation in three key leaf photosynthetic traits: the maximum carboxylation rate at 25 °C (Vcmax25), leaf chlorophyll content (LCC), and leaf mass per area (LMA) in the 1D-SCOPE and 3D-Helios models. Weekly field measurements were conducted during the growing season of 2024 to support the simulation. We designed ten leaf trait parameterization schemes by incorporating different combinations of vertical profiles and seasonal changes, while assuming homogeneous canopy architecture in both models. Our results revealed that Vcmax25 vertical and seasonal variation had the strongest influence on simulated GPP in both 1D and 3D models, while LCC and LMA effects were minimal. Particularly, the scheme with an empirically parameterized Vcmax25 profile achieved comparable performance to the scheme with the measured Vcmax25 profile. Both 1D-SCOPE and 3D-Helios accurately modeled GPP (SCOPE: R2 = 0.87, Bias = 0.55 µmol m⁻² s⁻¹; Helios: R2 = 0.9, Bias = 0.22 µmol m⁻² s⁻¹) under the most complex scheme, and their responses to vertical and seasonal variation in leaf traits were consistent, demonstrating the robustness of our findings. Based on our findings, we propose a scalable framework for parameterizing leaf traits to improve GPP simulations. This study contributes to improving the representation of leaf trait dynamics in canopy-level photosynthesis models, potentially enhancing our ability to predict crop productivity and understand agroecosystem carbon dynamics.

Photosynthesis↗
DOE OSTI2023

Photometric Objects Around Cosmic Webs (PAC) Delineated in a Spectroscopic Survey. IV. High-precision Constraints on the Evolution of the Stellar–Halo Mass Relation at Redshift z < 0.7

Taking advantage of the Photometric objects Around Cosmic webs method developed in Paper I, we measure the excess surface density $\overline{n}$ 2 w p of the photometric objects around spectroscopic objects down to stellar masses 10 8.0 M ⊙ , 10 9.2 M ⊙ , and 10 9.8 M ⊙ in the redshift ranges of z s < 0.2, 0.2 < z s < 0.4, and 0.5 < z s < 0.7, respectively, using data from the DESI Legacy Imaging Surveys and spectroscopic samples from the Sloan Digital Sky Survey (i.e., the Main, LOWZ, and CMASS samples). We model the measured in an N-body simulation, using the abundance matching method, and we constrain the stellar–halo mass relations (SHMRs) in the three redshift ranges to percent levels. With the accurate modeling, we demonstrate that the stellar mass scatter for a given halo mass is nearly a constant, and that the empirical form of Behroozi et al. describes the SHMR better than the double-power-law form at low mass. Our SHMR accurately captures the downsizing of massive galaxies from z s = 0.7, while it also indicates that small galaxies are still growing faster than their host halos. The galaxy stellar mass functions (GSMFs) from our modeling are in perfect agreement with the model-independent measurements in Paper III, although the current work extends the GSMFs to a much smaller stellar mass. Based on the GSMFs and the SHMRs, we derive the stellar mass completeness and halo occupation distributions for the LOWZ and CMASS samples, which are useful for correctly interpreting their cosmological measurements, such as galaxy–galaxy lensing and redshift space distortion.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Co-op at Sandia National Laboratories (July - December 2019, Final Report)

This co-op was performed at Sandia National Laboratories (SNL) within the Weapon Surety Engineering 11 Department (9435), which is a customer-focused organization that provides engineering and system analysis expertise to ensure a safe deterrent throughout the entire weapon lifecycle. Engineers in 9435 develop a deep knowledge in both component and system function to support rigorous evaluation and mitigation of potential failure modes. They operate across multiple engineering disciplines (mechanical, electrical, computer, materials and systems engineering) with opportunities to develop crossdisciplinary capability. The team supports a variety of stockpile systems and is part of the product teams during development, design and production, as well as advanced concept and exploratory efforts. 9435 engineers use their extensive component and system knowledge, as well as experimental data and modeling, to ensure products function as intended with assured safety. Members of the department learn the function of multiple components, how those components integrate within the system and apply surety principles and processes to ensure a safe, secure, reliable, and effective U.S. nuclear deterrent.

42 ENGINEERING↗
DOE OSTI2026

Generative Thermodynamic Computing

Here, we introduce a generative modeling framework for thermodynamic computing, in which structured data are synthesized from noise by the natural time evolution of a physical system governed by Langevin dynamics. While conventional diffusion models use neural networks to perform denoising, here the information needed to generate structure from noise is encoded by the dynamics of a thermodynamic system. Training proceeds by maximizing the probability with which the computer generates the reverse of a noising trajectory, which ensures that the computer generates data with minimal heat emission. We demonstrate this framework within a digital simulation of a thermodynamic computer. If realized in analog hardware, such a system would function as a generative model that produces structured samples without the need for artificially injected noise or active control of denoising.

Whitelam, Stephen [Lawrence Berkeley National Labo↗
DOE OSTI2020

Automated Fitting of a Semi-empirical Multiphase Equation of State for Carbon

The equation of state (EOS) of carbon is important in high explosive, geophysical, and inertial confinement fusion applications. Within the semi-empirical Sesame framework, the EOS of each phase is represented by a sum of cold, vibrational, and thermal electronic Helmholtz free energy contributions. Each phase has ~5-10 independent parameters that are adjusted to reproduce single-phase data (e.g., thermal expansion, isothermal compression) as well as experimentally- and computationally- derived phase boundaries. Manual calibration of the full multiphase EOS is arduous. We present our progress in development of automated EOS parameterization based on minimization of an objective function. Here, this function encodes deviation of model EOS results from experimental/computational benchmarks. Optimization is implemented as a combination of global (particle swarm) and local optimization techniques.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2024

Unveiling the Essential Parameters Driving Mineral Reactions during CO2 Storage in Carbonate Aquifers through Proxy Models

Numerical simulation is a commonly employed technique for studying carbon dioxide (CO2) storage processes in porous media, particularly saline aquifers. It enables the representation of diverse trapping mechanisms and the assessment of CO2 retention capacity within the subsurface. The intricate physicochemical phenomena involved necessitate the incorporation of multiphase flow, accurate depiction of fluid and rock properties, and their interactions. Among these factors, geochemical reaction rates and mechanisms are pivotal for successful CO2 trapping in carbonate reactive rocks. However, research on kinetic parameters and the influence of lithology on CO2 storage remains limited. This limitation is partly due to the challenges faced in laboratory experiments, where the time scale of the reactions and the lack of in situ conditions hinder accurate measurement of mineral reaction rates. This study employs proxy models constructed using response surfaces calibrated with simulation results to address uncertainties associated with geochemical reactions. Monte Carlo simulation is utilized to explore a broader range of parameters and identify influential factors affecting CO2 mineralization. The findings indicate that an open database containing kinetic parameters can support uncertainty assessment. Additionally, the proxy models effectively represent objective functions related to CO2 injectivity and mineralization, with calcite dissolution playing a predominant role. pH, calcite concentration, and CO2 injection rate significantly impact dolomite precipitation, while quartz content remains unaffected.

58 GEOSCIENCES↗
DOE OSTI2025

Response functions and giant monopole resonances for light to medium-mass nuclei from the ab initio symmetry-adapted no-core–shell model

Using the ab initio symmetry-adapted no-core–shell model, we compute sum rules and response functions for light to medium-mass nuclei, starting from interactions that are derived in the chiral effective field theory. Specifically, we investigate electromagnetic transitions of monopole, dipole and quadrupole nature for 4 He, and explore dominant features of giant monopole resonances in symmetric nuclei such as the closed-shell 4 He and 16 O light nuclei, the intermediate-mass open-shell 20 Ne and the medium-mass closed-shell 40 Ca. Furthermore, for the NNLO opt chiral potential, we determine parameter-free monopole sum rules, which can provide information on the incompressibility of symmetric nuclear matter. Here, we report 213(10) MeV as an estimate for the compression modulus for infinite nuclear matter, which overlaps with the lower range of values often used in current astrophysical applications.

ab initio nuclear structure↗
DOE OSTI2020

Platinum and Palladium Monolayer Electrocatalysts for Formic Acid Oxidation

The direct formic acid fuel cell holds great promise as a next generation portable power source. In this paper we report an experimental study on Pt and Pd monolayer (Pt* and Pd*) atop the close-packed facet of transition metal substrates (denoted Pt*/M or Pd*/M, where M = Pt, Pd, Ir, Au, Rh and Ru) model catalysts for formic acid oxidation (FAO) and demonstrate a promotional effect on Pt*/Au(111) and Pd*/Pt(111) surfaces. Contrary to findings on monometallic surfaces, in situ infrared reflection adsorption spectroscopy collected during formic acid oxidation at potentials anodic of 375 mV reveal that the poisoning reaction intermediate CO is not formed on the monolayer surfaces, suggesting a promotion of the direct mechanisms of FAO at the expense of the indirect mechanism through CO. Our density functional theory calculations on model surfaces with 1:1 stoichiometry for overlayer to support metal atoms for the thermochemistry of the elementary steps defined by adsorbed CO, OH, COOH, and HCOO on the (111) facet of Pt, PtML/Au, Pd, and PdML/Pt largely attribute the promotional effect observed for the monolayer catalysts to easier removal of CO brought about by easier activation of water, relative to the monometallic catalysts. This synergy between experiments and theory brings us closer to a fundamental understanding of FAO electrocatalysts under reaction conditions, paving the way to achieving more active electrocatalysts possibly with less Pt or Pd; a pre-requisite for the mass commercialization of this technology.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2026

Conservative velocity mappings for discontinuous Galerkin kinetics

Continuum computational kinetic plasma models evolve the distribution function of a plasma species f s on a phase-space grid over time. In many problems of interest the distribution function has limited extent in velocity space; hence, using a uniform, highly refined mesh would be costly and slow. Nonuniform velocity grids can reduce the computational cost by placing more degrees of freedom where f s is appreciable and fewer where it is not. In this work we introduce a first-of-its kind discontinuous Galerkin approach to nonuniform velocity-space discretization using mapped velocity coordinates. This new method is presented in the context of a gyrokinetic model used to study magnetized plasmas. We create discretizations of collisionless and collisional terms using mappings in a way that exactly conserves particles and energy. Numerical tests of such properties are presented, and we show that this new discretization can reproduce earlier gyrokinetic simulations using grids with up to 6–60 times fewer cells and 22X-60X speed-ups depending on dimensionality, geometry and plasma parameters.

Discontinuous Galerkin↗
DOE OSTI2025

Bayesian Inference for the Seismic Moment Tensor Using Regional Waveforms and Teleseismic- P Polarities with a Data-Derived Distribution of Velocity Models and Source Locations

The largest source of uncertainty in any source inversion is the velocity model used in the transfer function that relates observed ground motion to the seismic moment tensor. However, standard inverse procedure often does not quantify uncertainty in the seismic moment tensor due to error in the Green’s functions from uncertain event location and Earth structure. Here, we incorporate this uncertainty into an estimation of the seismic moment tensor using a data-derived distribution of velocity models based on complementary geophysical data sets, including thickness constraints, velocity profiles, gravity data, surface-wave group velocities, and regional body-wave travel times. The data-derived distribution of velocity models is then used as a prior distribution of Green’s functions for use in Bayesian inference of an unknown seismic moment tensor using regional and teleseismic-P waveforms. The use of multiple data sets is important for gaining resolution to different components of the moment tensor. The combined likelihood is estimated using data-specific error models and the posterior of the seismic moment tensor is estimated and interpreted in terms of the most probable source type.

58 GEOSCIENCES↗
DOE OSTI2024

Extreme sparsification of physics-augmented neural networks for interpretable model discovery in mechanics

Data-driven constitutive modeling with neural networks has received increased interest in recent years due to its ability to easily incorporate physical and mechanistic constraints and to overcome the challenging and time-consuming task of formulating phenomenological constitutive laws that can accurately capture the observed material response. However, even though neural network-based constitutive laws have been shown to generalize proficiently, the generated representations are not easily interpretable due to their high number of trainable parameters. Sparse regression approaches exist that allow for obtaining interpretable expressions, but the user is tasked with creating a library of model forms which by construction limits their expressiveness to the functional forms provided in the libraries. Here, in this work, we propose to train regularized physics-augmented neural network-based constitutive models utilizing a smoothed version of $L^0$-regularization. This aims to maintain the trustworthiness inherited by the physical constraints, but also enables interpretability which has not been possible thus far on any type of machine learning-based constitutive model where model forms were not assumed a priori but were actually discovered. During the training process, the network simultaneously fits the training data and penalizes the number of active parameters, while also ensuring constitutive constraints such as thermodynamic consistency. We show that the method can reliably obtain interpretable and trustworthy constitutive models for compressible and incompressible hyperelasticity, yield functions, and hardening models for elastoplasticity, using synthetic and experimental data. This work aims to set a new paradigm for interpretable machine learning models in the broad area of solid mechanics where low and limited data is available along with prior knowledge of physical constraints that the learned maps need to obey. This paradigm can potentially be extended to a broader spectrum of scientific exploration.

Data-driven constitutive models↗
DOE OSTI2024

Smooth trends in fermium charge radii and the impact of shell effects

The quantum-mechanical nuclear-shell structure determines the stability and limits of the existence of the heaviest nuclides with large proton numbers Z ≳ 100. Shell effects also affect the sizes and shapes of atomic nuclei, as shown by laser spectroscopy studies in lighter nuclides. However, experimental information on the charge radii and the nuclear moments of the heavy actinide elements, which link the heaviest naturally abundant nuclides with artificially produced superheavy elements, is sparse. Here we present laser spectroscopy measurements along the fermium (Z = 100) isotopic chain and an extension of data in the nobelium isotopic chain (Z = 102) across a key region. Multiple production schemes and different advanced techniques were applied to determine the isotope shifts in atomic transitions, from which changes in the nuclear mean-square charge radii were extracted. A range of nuclear models based on energy density functionals reproduce well the observed smooth evolution of the nuclear size. Both the remarkable consistency of model prediction and the similarity of predictions for different isotopes suggest a transition to a regime in which shell effects have a diminished effect on the size compared with lighter nuclei.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2022

Hydrogen Mitigation Process Testing at Nevada Solar One

The National Renewable Energy Laboratory (NREL) and Acciona Solar Power (ASP) developed and installed a process that addresses the issue of hydrogen buildup in Acciona's Nevada Solar One power plant. Our method selectively removes hydrogen from the expansion tanks of the power plant to control hydrogen levels in the circulating heat-transfer fluid (HTF). During previous work, we developed a sensor that measures hydrogen partial pressure in the expansion-tank headspace gas. We demonstrated that our sensor measures hydrogen levels over a wide range of partial pressure from 10 mbar down to 0.003 mbar. More recently, we conceived and developed an integrated process module that performs both hydrogen sensing and separating functions. The sensor/separator measures hydrogen partial pressure in the headspace gas in the same way as our original sensor design. Additionally, the integrated module separates hydrogen from the headspace gas to reduce hydrogen to the level needed to maintain the performance of receivers in the collector field. Laboratory testing at NREL showed that the sensor function had an accuracy of +/-7%, and the hydrogen extraction rate for separator function was consistent with our modeling predictions. The primary benefit of this module is its simple design, both in terms of function and incorporation into the HTF subsystem of the power plant. Most recently, NREL and ASP completed installation and initial testing of a mitigation process at ASP's Nevada Solar One power plant in Boulder City, Nevada. In this paper, we report on the completed installation, initial testing, and plans to bring the process to full automation, so that it can be operated unattended on a daily schedule.

chemical elements↗
DOE OSTI2023

Baryonic imprints on DM haloes: the concentration–mass relation in the C amels simulations

ABSTRACT The physics of baryons in haloes, and their subsequent influence on the total matter phase space, has a rich phenomenology and must be well understood in order to pursue a vast set of questions in both cosmology and astrophysics. We use the Cosmology and Astrophysics with MachinE Learning Simulation (Camels) suite to quantify the impact of four different galaxy formation parameters/processes (as well as two cosmological parameters) on the concentration–mass relation, cvir−Mvir. We construct a simulation-informed non-linear model for concentration as a function of halo mass, redshift, and six cosmological/astrophysical parameters. This is done for two galaxy formation models, IllustrisTNG and Simba, using 1000 simulations of each. We extract the imprints of galaxy formation across a wide range in mass $M_{\rm vir}\in [10^{11}, 10^{14.5}] \, {\rm M}_\odot \, h^{-1}$ and in redshift z ∈ [0, 6] finding many strong mass- and redshift-dependent features. Comparisons between the IllustrisTNG and Simba results show the astrophysical model choices cause significant differences in the mass and redshift dependence of these baryon imprints. Finally, we use existing observational measurements of cvir−Mvir to provide rough limits on the four astrophysical parameters. Our non-linear model is made publicly available and can be used to include Camels-based baryon imprints in any halo model-based analysis.

Astronomy & Astrophysics↗