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At least 1,099 records · Page 61

Constraints on f ( R ) gravity from thermal-Sunyaev-Zel’dovich-effect-selected SPT galaxy clusters and weak lensing mass calibration from DES and HST

We present constraints on the f ( R ) gravity model using a sample of 1005 galaxy clusters in the redshift range 0.25–1.78 that have been selected through the thermal Sunyaev-Zel’dovich effect from South Pole Telescope data and subjected to optical and near-infrared confirmation with the multicomponent matched filter algorithm. We employ weak gravitational lensing mass calibration from the Dark Energy Survey Year 3 data for 688 clusters at z < 0.95 and from the Hubble Space Telescope for 39 clusters with 0.6 < z < 1.7 . Our cluster sample is a powerful probe of f ( R ) gravity, because this model predicts a scale-dependent enhancement in the growth of structure, which impacts the halo mass function (HMF) at cluster mass scales. To account for these modified gravity effects on the HMF, our analysis employs a semianalytical approach calibrated with numerical simulations. Combining calibrated cluster counts with primary cosmic microwave background temperature and polarization anisotropy measurements from the Planck 2018 release, we derive robust constraints on the f ( R ) parameter f R 0 . Our results, log 10 | f R 0 | < − 5.32 at the 95% credible level, are the tightest current constraints on f ( R ) gravity from cosmological scales. This upper limit rules out f ( R ) -like deviations from general relativity that result in more than a ∼ 20 % enhancement of the cluster population on mass scales M 200 c > 3 × 10 14 M ⊙ . Published by the American Physical Society 2025

79 ASTRONOMY AND ASTROPHYSICS↗

Clustering Acoustic Background Noise in the Stratosphere Using Machine Learning

Infrasound, characterized by low-frequency sound inaudible to humans (<20 Hz), emanates from natural and anthropogenic sources. Its efficacy for monitoring phenomena necessitates robust sensing networks. Traditional ground-based infrasound sensors have limitations due to atmospheric dynamics and noise interference. Balloon-bore sensors have emerged as an alternative, offering reduced noise and improved capabilities. This study bridges clustering algorithms with balloon borne infrasound data, a domain yet to be explored. Employing K-Means, DBSCAN, and GMM algorithms on normalized and reshaped data and only normalized data from a New Zealand-based NASA balloon flight, insights into background noise at stratospheric altitudes were revealed. Despite challenges arising from distinguishing signals amid unique background noise, this research provides vital reference material for noise analysis and calibration. Beyond infrasound event capture, the dataset enriches comprehension of background noise characteristics in the southern hemisphere.

47 OTHER INSTRUMENTATION↗

Incorporating historical data and past analyses for improved tensile property prediction of 9% Cr steel

Data-driven analytical clustering and visualization techniques were applied to the dataset of 9% Cr experimental alloy data generated through the eXtremeMAT project. Techniques and results were compared with the resulting clusters obtained through similar analytical techniques on previous and reduced versions of the dataset. The principal components were generated in order to reduce the dimensionality of the complex dataset and to visualize the underlying trends in the data. Partitioning around medoids was performed on the resulting principal components to determine relevant clusters. Domain knowledge labels were further applied to the principal components to compare the labels with the trends identified through the clustering methods. The resulting clusters show the addition of the new data into the dataset, and show where alignment between the domain knowledge labels and partitioning around medoids (PAM) clusters show where the labels are appropriate. The clusters can be used to compare the tensile properties of the alloys, and to reduce the variation in the dataset.

Alloy design, Mechanical Properties, data analysis↗

High-accuracy emulators for observables in ΛCDM, N eff, Σ m ν, and w cosmologies

ABSTRACT We use the emulation framework CosmoPower to construct and publicly release neural network emulators of cosmological observables, including the cosmic microwave background (CMB) temperature and polarization power spectra, matter power spectrum, distance-redshift relation, baryon acoustic oscillation (BAO) and redshift-space distortion (RSD) observables, and derived parameters. We train our emulators on Einstein–Boltzmann calculations obtained with high-precision numerical convergence settings, for a wide range of cosmological models including ΛCDM, wCDM, ΛCDM + Neff, and ΛCDM + Σmν. Our CMB emulators are accurate to better than 0.5 per cent out to ℓ = 104, which is sufficient for Stage-IV data analysis, and our P(k) emulators reach the same accuracy level out to $k=50 \, \, \mathrm{Mpc}^{-1}$, which is sufficient for Stage-III data analysis. We release the emulators via an online repository (CosmoPower Organisation), which will be continually updated with additional extended cosmological models. Our emulators accelerate cosmological data analysis by orders of magnitude, enabling cosmological parameter extraction analyses, using current survey data, to be performed on a laptop. We validate our emulators by comparing them to class and camb and by reproducing cosmological parameter constraints derived from Planck TT, TE, EE, and CMB lensing data, as well as from the Atacama Cosmology Telescope Data Release 4 CMB data, Dark Energy Survey Year-1 galaxy lensing and clustering data, and Baryon Oscillation Spectroscopic Survey Data Release 12 BAO and RSD data.

Astronomy & Astrophysics↗

Coincident learning for beam-based rf station fault identification using phase information at the SLAC linac coherent light source

Anomalies in radio-frequency (rf) stations can result in unplanned downtime and performance degradation in linear accelerators such as SLAC’s Linac Coherent Light Source (LCLS). Detecting these anomalies is challenging due to the complexity of accelerator systems, high data volume, and scarcity of labeled fault data. Prior work identified faults using beam-based detection, combining rf amplitude and beam position monitor data. Due to the simplicity of the rf amplitude data, classical methods are sufficient to identify faults, but the recall is constrained by the low-frequency and asynchronous characteristics of the data. In this work, we leverage high-frequency, time-synchronous rf phase data to enhance anomaly detection in the LCLS accelerator. Due to the complexity of phase data, classical methods fail, and we instead train deep neural networks within the Coincident Anomaly Detection (CoAD) framework. We find that applying CoAD to phase data detects nearly 3 times as many anomalies as when applied to amplitude data, while achieving broader coverage across rf stations. Furthermore, the rich structure of phase data enables us to cluster anomalies into distinct physical categories. Through the integration of auxiliary system status bits, we link clusters to specific fault signatures, providing additional granularity for uncovering the root cause of faults. We also investigate interpretability via Shapley values, confirming that the learned models focus on the most informative regions of the data and providing insight for cases where the model makes mistakes. This work demonstrates that phase-based anomaly detection for rf stations improves both diagnostic coverage and root cause analysis in accelerator systems and that deep neural networks are essential for effective analysis.

Accelerator Physics (physics.acc-ph)↗

Characterizing Spatial and Temporal Variability of California’s Coastal Upwelling Using a Satellite-Derived CUTI Index

Ocean upwelling off California is a wind-driven coastal process with complex interactions between spatial wind patterns and sea surface temperatures. Large-scale spatial and temporal upwelling characterizations are traditionally based on numerical models, while quantifying upwelling with direct observations is not straightforward. To complement model-based upwelling characterizations, here we use satellite estimates of winds, sea surface temperatures, and ocean currents along the California coast to calculate the coastal upwelling transport index (CUTI), originally calculated from a numerical ocean model. The CUTI framework accounts for both Ekman and geostrophic offshore-directed ocean transport, the latter of which is often neglected in satellite-based upwelling assessments. The approach yields the CUTI over a 30-yr period at a daily temporal and 0.25° spatial resolution to analyze upwelling patterns, with focus on potential Morro Bay and Humboldt wind energy areas. Morro Bay (CUTI median of 0.63 m 2 s −1 ) exhibits stronger, more consistent upwelling throughout the year, whereas Humboldt (CUTI median of 0.45 m 2 s −1 ) exhibits a pronounced seasonal cycle with strongest upwelling in the summer and occasional downwelling in winter. The cluster analysis of 1993–2022 satellite maps of CUTI identifies four characteristic spatial upwelling patterns along the coast, corresponding to distinct spatial distributions of sea surface temperature anomalies, Ekman transport, and geostrophic ocean water transport. This dataset provides an observation-based foundation for characterizing natural coastal upwelling off the California coast, showing good agreement with the original model CUTI while being based on satellite data and offering increased spatial resolution.

16 TIDAL AND WAVE POWER↗

Diffuse hot gas in the NGC 4261 group of galaxies

We have found diffuse X-ray gas in the group of galaxies containing the elliptical galaxy NGC 4261. This galaxy along with its associated companions are behind the Virgo cluster in the W-cloud. A recent analysis of the velocity structure in the Virgo region indicates that the W-cloud has approximately 30 members, most of which are low luminosity dwarfs. The hot X-ray emitting gas is centered about halfway between NGC 4261 and NGC 4264 and extends out to a radius of approximately 40 min(620 kpc). The spectral data for the diffuse component are well fitted with a Raymond-Smith plasma model with a temperature of 0.85(sup +0.21)(sub -0.16) keV and abundance less than 0.08 times the solar value. Under the assumption that the diffuse gas is in hydrostatic equilibrium the total mass within 40 min is 1.9 x 10(exp 13) solar mass. We estimate that the total baryonic mass of the hot gas and the galaxies is 20%-34% of the total mass in the central 40 min radius of this group. This group of galaxies contains NGC 4273 which exhibits a 'bow shock' morphology similar to that of NGC 2276. This is thought to occur when the ram pressure from the intragroup gas significantly perturbs the interstellar medium in a late-type galaxy. We show that this is unlikely in this group.

Davis, David S.↗

Using Clustering to Establish Climate Regimes from PCM Output

A multivariate statistical clustering technique--based on the k-means algorithm of Hartigan has been used to extract patterns of climatological significance from 200 years of general circulation model (GCM) output. Originally developed and implemented on a Beowulf-style parallel computer constructed by Hoffman and Hargrove from surplus commodity desktop PCs, the high performance parallel clustering algorithm was previously applied to the derivation of ecoregions from map stacks of 9 and 25 geophysical conditions or variables for the conterminous U.S. at a resolution of 1 sq km. Now applied both across space and through time, the clustering technique yields temporally-varying climate regimes predicted by transient runs of the Parallel Climate Model (PCM). Using a business-as-usual (BAU) scenario and clustering four fields of significance to the global water cycle (surface temperature, precipitation, soil moisture, and snow depth) from 1871 through 2098, the authors' analysis shows an increase in spatial area occupied by the cluster or climate regime which typifies desert regions (i.e., an increase in desertification) and a decrease in the spatial area occupied by the climate regime typifying winter-time high latitude perma-frost regions. The patterns of cluster changes have been analyzed to understand the predicted variability in the water cycle on global and continental scales. In addition, representative climate regimes were determined by taking three 10-year averages of the fields 100 years apart for northern hemisphere winter (December, January, and February) and summer (June, July, and August). The result is global maps of typical seasonal climate regimes for 100 years in the past, for the present, and for 100 years into the future. Using three-dimensional data or phase space representations of these climate regimes (i.e., the cluster centroids), the authors demonstrate the portion of this phase space occupied by the land surface at all points in space and time. Any single spot on the globe will exist in one of these climate regimes at any single point in time. By incrementing time, that same spot will trace out a trajectory or orbit between and among these climate regimes (or atmospheric states) in phase (or state) space. When a geographic region enters a state it never previously visited, a climatic change is said to have occurred. Tracing out the entire trajectory of a single spot on the globe yields a 'manifold' in state space representing the shape of its predicted climate occupancy. This sort of analysis enables a researcher to more easily grasp the multivariate behavior of the climate system.

Oglesby, Robert↗

Utilizing Airborne and Space-Based Remote Sensing Imagery to Implement the Unvegetated-Vegetated Ratio to Assess Salt Marsh Vulnerability in South Carolina

Among the most productive ecosystems on earth, salt marshes provide crucial ecosystem services including water filtration, shoreline protection, storm surge buffering, and flood mitigation. Marshes are largely dependent on their sediment budget which can significantly vary across a region and can be used to determine the life span of the marsh. Upstream land use change near Charleston, South Carolina, along with rising sea levels, are expected to alter sediment budgets and threaten marsh stability and long-term health. The unvegetated-vegetated ratio (UVVR), developed by researchers at USGS, is a scalable and efficient method to assess vulnerability. The NASA DEVELOP National Program collaborated with the South Carolina Department of Natural Resources, the South Carolina Department of Health and Environmental Control, and the United States Geological Survey Woods Hole Coastal and Marine Science Center to apply the UVVR method within Google Earth Engine. Marsh vulnerability was analyzed using UVVR derived from clustering and manual interpretation of National Agriculture Imagery Program (NAIP) high-resolution aerial imagery. NAIP derived UVVR was aggregated to Landsat 8 Operational Land Imager (OLI) and Landsat 7 Enhanced Thematic Mapper (ETM+) resolution and projection. A Random Forest Regression between Landsat derived data and UVVR was modeled to estimate a potential relationship. The estimation of this relationship was used to produce temporal change analysis maps of salt marsh vulnerability back to 1984. The NAIP imagery processed through Google Earth Engine allowed us to make detailed UVVR maps for 2009, 2015, 2017, and 2019 for decision making within South Carolina. Google Earth Engine scripting provided a novel approach to UVVR methodology that will allow decision makers to input new marsh regions and easily calculate marsh vulnerability without external data downloading. These results were used to understand what areas of the marsh need most resource allocation in the future.

NASA DEVELOP↗

SpecDis: Value Added Distance Catalog for 4 Million Stars from DESI Year-1 Data

We present the SpecDis value-added stellar distance catalog accompanying DESI Data Release 1. SpecDis trains a feed-forward neural network (NN) with Gaia parallaxes and gets the distance estimates. To build up an unbiased training sample, we do not apply selections on parallax error or signal-to-noise (S/N) of the stellar spectra, and instead, we incorporate parallax error into the loss function. Moreover, we employ principal component analysis to reduce the noise and dimensionality of stellar spectra. Validated by independent external samples of member stars with precise distances from globular clusters, dwarf galaxies, stellar streams, combined with blue horizontal branch stars, we demonstrate that our distance measurements show no significant bias up to 100 kpc, and are much more precise than Gaia parallax beyond 7 kpc. The median distance uncertainties are 23%, 19%, 11%, and 7% for S/N < 20, 20 ≤ S/N < 60, 60 ≤ S/N < 100, and S/N ≥ 100. Selecting stars with ${\mathrm{log}}\,g\lt 3.8$ and distance uncertainties smaller than 25%, we have more than 74,000 giant candidates within 50 kpc of the Galactic center and 1500 candidates beyond this distance. Additionally, we develop a Gaussian mixture model to identify unresolvable equal-mass binaries by modeling the discrepancy between the NN-predicted and the geometric absolute magnitudes from Gaia parallaxes and identify 120,000 equal-mass binary candidates. Our final catalog provides distances and distance uncertainties for >4 million stars, offering a valuable resource for Galactic astronomy.

astronomy data analysis↗

Kinetic and X-ray Absorption Spectroscopic Analysis of Catalytic Redox Cycles over Highly Uniform Polymetal Oxo Clusters

Metal–organic framework materials (MOFs) offer an opportunity for investigating catalytic properties of polymetal oxo clusters that are highly well defined and uniform in nature, in contrast to other classes of catalysts that may exhibit a propensity toward active site heterogeneity. We report herein a kinetic and X-ray absorption spectroscopy (XAS) analysis of the two-electron oxidation of CO over divalent metal sites in MIL-100(M = Fe, Cr) (MIL = Materials of Institut Lavoisier) materials carrying μ 3 -oxo bridged trimers, and connect observations about the kinetic relevance of redox steps to density functional theory (DFT) predictions published previously. The high degree of uniformity evident from in situ titration measurements leads to a congruence in mechanistic inferences made from steady-state catalytic, transient stoichiometric, isotopic exchange, and isotopic tracer data that all point to a sequential mechanism comprised of separate oxidation and reduction half-cycle steps conjoined by an active oxygen intermediate. In situ XAS data reinforce mechanistic conclusions derived from kinetic analysis, and suggest that the active oxygen intermediate may be more appropriately characterized as an iron-oxyl (Fe 3+ –O – ) rather than an iron-oxo (Fe 4+ =O 2– ) species. The Cr analogue of MIL-100 exhibits contrasting rate features that can be rationalized using an identical sequence of steps as MIL-100(Fe), but with a highly dissimilar set of kinetic parameters that can also be validated using transient stoichiometric experiments. The larger coverages of active oxygen intermediates on MIL-100(Cr) are consistent with predictions from prior DFT studies that suggest more stable and less reactive active oxygen species for metals with lower d-electron counts, and point to metal identity as a lever for precisely controlling the kinetic relevance of oxidation and reduction half-cycles in catalytic redox sequences over polymetal oxo clusters. Importantly, the results presented point to the utility of developing broadly applicable structure–catalytic property relationships over MOF nodes specifically, and highly uniform catalysts more generally.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Atacama Compact Array Measurements of the Molecular Mass in the NGC 5044 Cooling-Flow Group

The fate of cooling gas in the centers of galaxy clusters and groups is still not well understood, as is also the case for the complex processes of triggering star formation in central dominant galaxies, reheating of cooled gas by active galactic nuclei (AGN), and the triggering or “feeding” of supermassive black hole outbursts. We present CO observations of the early-type galaxy NGC 5044, which resides at the center of an X-ray bright group with a moderate cooling flow. For our analysis we combine CO(2−1) data from the 7 m antennae of the Atacama Compact Array (ACA) and the ACA total power array (TP). We demonstrate, using the 7 m array data, that we can recover the total flux inferred from IRAM 30 m single-dish observations, which corresponds to a total molecular mass of about 4 × 10(exp 7) M⨀ Most of the recovered flux is blueshifted with respect to the galaxy rest frame and is extended on kiloparsec-scales, suggesting low filling factor dispersed clouds. We find eight concentrations of molecular gas out to a radius of 10” (1.5 kpc), which we identify with giant molecular clouds. The total molecular gas mass is more centrally concentrated than the X-ray emitting gas but is extended in the northeast-southwest direction beyond the IRAM 30 m beam. We also compare the spatial extent of the molecular gas to the Hα emission: The CO emission coincides with the very bright Hα region in the center. We do not detect CO emission in the fainter Hα regions. Furthermore, we find two CO absorption features spatially located at the center of the galaxy, within 5 pc projected distance of the AGN, infalling at 255 and 265 km s(exp −1) relative to the AGN. This indicates that the two giant molecular clouds seen in absorption are most likely within the sphere of influence of the supermassive black hole.

Galaxy clusters↗

Fe protein docking transduces conformational changes to MoFe nitrogenase active site in a nucleotide-dependent manner

The reduction of dinitrogen to ammonia catalyzed by nitrogenase involves a complex series of events, including ATP hydrolysis, electron transfer, and activation of metal clusters for N 2 reduction. Early evidence shows that an essential part of the mechanism involves transducing information between the nitrogenase component proteins through conformational dynamics. Here, millisecond time-resolved hydrogen-deuterium exchange mass spectrometry was used to unravel peptide-level protein motion on the time scale of catalysis of Mo-dependent nitrogenase from Azotobacter vinelandii. Normal mode analysis calculations complemented this data, providing insights into the specific signal transduction pathways that relay information across protein interfaces at distances spanning 100 Å. Together, these results show that conformational changes induced by protein docking are rapidly transduced to the active site, suggesting a specific mechanism for activating the metal cofactor in the enzyme active site.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Unsupervised learning of ferroic variants from atomically resolved STEM images

An approach for the analysis of atomically resolved scanning transmission electron microscopy data with multiple ferroic variants in the presence of imaging non-idealities and chemical variabilities based on a rotationally invariant variational autoencoder (rVAE) is presented. We show that an optimal local descriptor for the analysis is a sub-image centered at specific atomic units, since materials and microscope distortions preclude the use of an ideal lattice as a reference point. The applicability of unsupervised clustering and dimensionality reduction methods is explored and is shown to produce clusters dominated by chemical and microscope effects, with a large number of classes required to establish the presence of rotational variants. Comparatively, the rVAE allows extraction of the angle corresponding to the orientation of ferroic variants explicitly, enabling straightforward identification of the ferroic variants as regions with constant or smoothly changing latent variables and sharp orientational changes. This approach allows further exploration of the chemical variability by separating the rotational degrees of freedom via rVAE and searching for remaining variability in the system. The code used in this article is available at https://github.com/saimani5/ferroelectric_domains_rVAE.

30 DIRECT ENERGY CONVERSION↗

The DESI N -body simulation project – I. Testing the robustness of simulations for the DESI dark time survey

ABSTRACT Analysis of large galaxy surveys requires confidence in the robustness of numerical simulation methods. The simulations are used to construct mock galaxy catalogues to validate data analysis pipelines and identify potential systematics. We compare three N-body simulation codes, abacus, gadget-2, and swift, to investigate the regimes in which their results agree. We run N-body simulations at three different mass resolutions, 6.25 × 108, 2.11 × 109, and 5.00 × 109 h−1 M⊙, matching phases to reduce the noise within the comparisons. We find systematic errors in the halo clustering between different codes are smaller than the Dark Energy Spectroscopic Instrument (DESI) statistical error for $s\ \gt\ 20\ h^{-1}$ Mpc in the correlation function in redshift space. Through the resolution comparison we find that simulations run with a mass resolution of 2.1 × 109 h−1 M⊙ are sufficiently converged for systematic effects in the halo clustering to be smaller than the DESI statistical error at scales larger than $20\ h^{-1}$ Mpc. These findings show that the simulations are robust for extracting cosmological information from large scales which is the key goal of the DESI survey. Comparing matter power spectra, we find the codes agree to within 1 per cent for k ≤ 10 h Mpc−1. We also run a comparison of three initial condition generation codes and find good agreement. In addition, we include a quasi-N-body code, FastPM, since we plan use it for certain DESI analyses. The impact of the halo definition and galaxy–halo relation will be presented in a follow-up study.

79 ASTRONOMY AND ASTROPHYSICS↗

The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters

Secondary metabolites are small molecules produced by all corners of life, often with specialized bioactive functions with clinical and environmental relevance. Secondary metabolite biosynthetic gene clusters (BGCs) can often be identified within DNA sequences by various sequence similarity tools, but determining the exact functions of genes in the pathway and predicting their chemical products can often only be done by careful, manual comparative analysis. To facilitate this, we report the first release of the secondary metabolism collaboratory (SMC), which aims to provide a comprehensive, tool-agnostic repository of BGC sequence data drawn from all publicly available and user-submitted bacterial and archaeal genome and contig sources. On the website, users are provided a searchable catalog of putative BGCs identified from each source, along with visualizations of gene and domain annotations derived from multiple sequence analysis tools. SMC’s data is also available through publicly-accessible application programming interface (API) endpoints to facilitate programmatic access. Users are encouraged to share their findings (and search for others’) through comment posts on BGC and source pages. At the time of writing, SMC is the largest repository of BGC information, holding 13.1M BGC regions from 1.3M source sequences and growing, and can be found at https://smc.jgi.doe.gov.

59 BASIC BIOLOGICAL SCIENCES↗

Interaction models and configurational entropies of binary MoTa and the MoNbTaW high entropy alloy

We introduce a simplified method to model the interatomic interactions of high entropy alloys based on a lookup table of cluster energies. Furthermore, these interactions are employed in replica exchange Monte Carlo simulations with histogram analysis to obtain thermodynamic properties across a broad temperature range. Kikuchi's cluster variation method entropy formalism is applied to directly calculate entropy from statistics on short- and long-range chemical order, and we discuss the convergence of the entropy as clusters of differing size are included. A high temperature series expansion aids in our understanding of the convergence. Computer codes implementing these methods, and supporting data, are freely available on the internet.

36 MATERIALS SCIENCE↗

Three dimensional CSCM method for the compressible Navier-Stokes equations with application to a multi-nozzle exhaust flowfield

The effective design of three-dimensional flow systems such as a clustered multinozzle shrouded exhaust system requires detailed analysis of the internal flowfield. It is pointed out that new numerical techniques on the most modern vector computers are making these analyses practicable. In this paper, the upwind differenced implicit conservative supracharacteristics method (CSCM) for three-dimensional viscous flow is presented. The new method is an implicit 'method of planes' symmetric Gauss-Seidel relaxation scheme. The data is conveniently stored on successive planes along the streamwise coordinate, and the system of equations is solved twice in each successive plane of the streamwise coordinate. The developed new three-dimensional compressible Navier-Stokes algorithm combines the best features of the storage and computationally efficient space marching procedures with the generality of time dependent techniques to solve flows with elliptic and streamwise separated flows.

Bardina, J.↗