Signatures of topological ground state degeneracy in Majorana islands
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Väyrynen, Jukka I. (ORCID:0000000275318764)↗
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Dynamical signatures of symmetry protected topology following symmetry breaking
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1-dimensional spin chains↗
Phonon modes and Raman signatures of MnBi 2n Te 3n+1 (n=1,2,3,4) magnetic topological heterostructures
An intrinsic antiferromagnetic topological insulator MnBi 2 Te 4 arises when intercalating a Mn-Te bilayer chain in a topological insulator, Bi 2 Te 3 . We present observations on the inter- and intralayer phonon modes of the generalized MnBi 2n Te 3n+1 (n=1,2,3,4) family using cryogenic low-frequency Raman spectroscopy with various polarization configurations. Two peaks at 66 and 112 cm –1 show abnormal perturbation in Raman linewidths below magnetic transition temperature due to spin-phonon coupling. In MnBi 4 Te 7 , B i2 Te 3 layers induce Davydov splitting of the A1g mode around 137 cm –1 at 5 K. The out-of-plane interlayer force constant estimated using the linear chain model was (3.98±0.14)×10 19 N/m 3 , three times weaker than that of Bi 2 Te 3 . Adding more Bi 2 Te 3 layers, such as MnBi 6 Te 10 and MnBi 8 Te 13 , makes Bi 2 Te 3 properties more dominant than magnetic properties. Our work experimentally and theoretically discovers the dynamics of phonon modes of MnBi 2n Te 3n+ 1 family, facilitating utilization of magnetic topological heterostructures.
74 ATOMIC AND MOLECULAR PHYSICS↗
Thermal activation signatures of the Anderson insulator and the Wigner solid forming near ν = 1
When interactions overcome disorder, integer quantum Hall plateaus support topological phases with different bulk insulators. In the center of the ν = 1 plateau the bulk is an Anderson-type insulator, while in the flanks of the plateau the bulk is the integer quantum Hall Wigner solid. We find that the activation energy along the ν = 1 plateau exhibits a very dramatic nonmonotonic dependence on the magnetic field, a dependence that is strongly correlated with the stability regions of the two phases. Furthermore, the activation energy has an unexpected minimum at the boundary between the Anderson insulator and the Wigner solid. Our findings constrain the theory of the integer quantum Hall Wigner solid, determine its thermodynamic properties, and reveal unusual behavior at the boundary between the Anderson insulator and the Wigner solid. Published by the American Physical Society 2024
75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
Phase and contrast moiré signatures in two-dimensional cone beam interferometry
Neutron interferometry has played a distinctive role in fundamental science and characterization of materials. Moiré neutron interferometers are candidate next-generation instruments: they offer microscopy-like magnification of the signal, enabling direct camera recording of interference patterns across the full neutron wavelength spectrum. Here we demonstrate the extension of phase-grating moiré interferometry to two-dimensional geometries. Our fork-dislocation phase gratings reveal phase singularities in the moiré pattern, and we explore orthogonal moiré patterns with two-dimensional phase gratings. Our measurements of phase topologies and gravitationally induced phase shifts are in good agreement with theory. These techniques can be implemented in existing neutron instruments to advance interferometric analyses of emerging materials and precision measurements of fundamental constants. Published by the American Physical Society 2024
Sarenac, D. (ORCID:0000000185753367)↗
Signatures of the attractive interaction in spin spectra of one-dimensional cuprate chains
Identifying the minimal model for cuprates is crucial for explaining the high- T c pairing mechanism. Recent photoemission experiments have suggested a significant near-neighbor attractive interaction V in cuprate chains, favoring pairing instability. To determine its strength, we systematically investigate the dynamical spin structure factors S ( q , ω ) using the density matrix renormalization group. Our analysis quantitatively reveals a notable softening in the two-spinon continuum, particularly evident in the intense spectrum at large momentum. This softening is primarily driven by the renormalization of the superexchange interaction, as determined by a comparison with the slave-boson theory. We also demonstrate the feasibility of detecting this spectral shift in thin-film samples using resonant inelastic x-ray scattering. Therefore, this provides a distinctive fingerprint for the attractive interaction, motivating future experiments to unveil essential ingredients in cuprates. Published by the American Physical Society 2024
Shen, Zecheng↗
Softening of dd excitation in the resonant inelastic x-ray scattering spectra as a signature of Hund's coupling in nickelates
We investigate the effects of Hund's coupling on the resonant x-ray absorption spectra of the recently discovered family of layered nickelate superconductors. We contrast two scenarios depending on the relative strength of the ratio of the effective Hund's coupling ( J H ) to the crystal fields ( Δ ) in these systems. We carry out the cluster and DFT + DMFT simulations of the RIXS signal at the Ni L edge for different values of Hund's coupling. We find the latter dominates for the parent compound while the former becomes important for sufficiently large doping. Our results are consistent with the observations of a softening of a RIXS peak as a function of doping by Rossi [], only when the Hund coupling is sizable. To interpret the results, we separate the theoretical RIXS signal into spin conserving and nonspin conserving channels and conclude that the infinite layer nickelates are in a regime where Δ and J compete effectively and suggest further experimental tests of the theory. Published by the American Physical Society 2025
75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
Cooperative Charge Ordering Signature of Trimer Molecules in Infinite-Layer CaCoO 2
The infinite-layer compound CaCoO 2 provides a compelling platform to explore how local orbital distortions evolve into collective electronic order. Using resonant soft x-ray scattering (RSXS) and its time-resolved counterpart (tr-RSXS), we reveal a cooperative coupling between two intertwined orders at the same in-plane wave vector, 𝑞 ≈ (1/4, 1/4, 0), comprising a quasi-two-dimensional orbital order associated with the distorted Co (1) sites and a quasi-three-dimensional trimerlike charge order stabilized through Co-O-Ca hybridization. The charge-sensitive component exhibits a uniform relaxation time of ∼400 fs (391 ± 5 fs) across multiple Co resonances, evidencing a collective charge response. A comparable timescale observed in the orbital order associated with the highly distorted Co (1) sites indicates that this collective behavior naturally originates from the same orbital framework that mediates both charge and orbital degrees of freedom. Together, these findings establish CaCoO 2 as a model system in which Jahn-Teller distortions, orbital hybridization, and geometric frustration cooperate to form molecular trimer units that dictate the macroscopic electronic behavior.
Lee, J.-S. [SLAC National Accelerator Laboratory (↗
Total absorption spectroscopy of two isomers in 70 Cu influencing nucleosynthesis signatures
Isomers have long been known to be important for astrophysical nucleosynthesis processes, yet they are often neglected in network calculations due to computational limitations or lack of data. "Astromers" are astrophysically metastable nuclear states that can greatly impact nucleosynthesis pathways. In this work we show that astromers further impact the time-dependent electromagnetic signal during heavy element nucleosynthesis. In an experiment performed at the National Superconducting Cyclotron Laboratory, three 𝛽-decaying states of 70 Cu (6 − ground state, and two isomeric states: 3 − and 1 + ) were produced. 𝛽-feeding values were extracted from experimental spectra and compared to shell-model and QRPA+PVC calculations. Here, average 𝛾-ray energies from the 𝛽-decay events were incorporated into simulations of heavy element nucleosynthesis and were found to exhibit different energy release profiles over time, which may impact, in aggregate, time-dependent observable signals.
59 ≤ A ≤ 89↗
Signatures of QCD conductivities in heavy-ion collisions
Dissipative processes are pivotal for understanding the hydrodynamic evolution of hot and dense quantum chromodynamics (QCD) matter created in relativistic nuclear collisions. The interplay of multiple conserved charges—net baryon, strangeness, and electric charge—is of particular interest. Here, we simulate the longitudinal hydrodynamic evolution with the three diffusion currents in a hydrodynamic model with a lattice-QCD-based equation of state, NEOS -4 D , and estimate rapidity distributions including diffusive corrections to the phase-space distribution in the presence of multiple charges, which ensure charge conservation at particlization. We determine the response of particle yields at midrapidity to changes in the diagonal and off-diagonal conductivities. Inversely, we find that most components of the conductivity matrix can be constrained experimentally using identified particle multiplicities at different collision energies.
73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
On Feature, Classifier and Detector Fusers for 235U Signatures Using Gamma Spectral Counts
Three types of information fusion strategies are studied to assess the performance of classifiers for detecting low-level 235 U radiation sources, using features obtained from gamma spectra of NaI detectors. These three strategies are based on using two spectral region features, fusing eight classifiers of diverse designs, and fusing multiple detectors located at different positions around the source. The inner, middle and outer groups of detectors, within a formation of two concentric circles and a spiral of 21 detectors, are identified based on their distance to the source, which is located at the center. This study provides two main qualitative insights into this classification task. First, the fusion of detectors leads to an overall improved classification performance, least in the inner group, most in the outer group, and in between for the middle group. Second, several classifiers and fusers achieve lower training error which does not translate to lower generalization error, indicating their over-fitting to training data.
Rao, Nageswara↗
A Process to Colorize and Assess Visualizations of Noisy X-Ray Computed Tomography Hyperspectral Data of Materials with Similar Spectral Signatures.
Abstract not provided.
Clifford, Joshua↗
Identifying the electrical signature of snow in photovoltaic inverter data
Explore the source record for details and available documents.
Cooper, Emma↗
Forward Modeling of Gamma Reaction History Signatures From Anticipated Deuterium-Tritium Filled MagLIF Implosions on Sandia’s Z-Machine
Nuclear reaction history measurements provide a bang time and burn width of Inertial Confinement Fusion (ICF) implosions and are essential for understanding implosion performance to constrain ICF capsule design. When fusion fuel contains Deuterium (D) and Tritium (T) gas, reaction history is informed by measuring the 16.75 MeV gamma rays generated from the D(T,γ) 5 He reaction. Such DT based reaction history measurements have not been made on the Magnetized Laser Inertial Fusion (MagLIF) platform on Sandia’s Z-Machine due to the lack of Tritium being used. The recent development of ICF implosions with tritiated fuel will open the possibility of measuring the gamma reaction history on the Z-Machine. A forward model of the Gamma Reaction History diagnostic on Z (GRH-Z) has been developed using the MCNP6.3 (Monte-Carlo N-Particle) radiation transport code. The model included the Z-Machine geometry of interest to characterize the impact of neutron induced gamma rays on the DT reaction history measurements. In addition, the impulse response functions of the GRH-Z diagnostic to understand the temporal response of the detector, and the minimum yields required to make a reaction history measurement were calculated. This approach also predicted that with T 2 gas doping of MagLIF implosions a reaction history may be made for high performance shots >8e12-2.4e13 depending on the chosen threshold for the detector, with a maximum signal to background ratio of 25%. It was found that for long duration ICF implosions that additional collimation will be needed to prevent the neutron induced gamma rays from modifying the shape of the measured DT reaction history curve.
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
Because they comprise some of the most efficient wood-decayers, Polyporales fungi impact carbon cycling in forest environment. Despite continuous discoveries on the enzymatic machinery involved in wood decomposition, the vision on their evolutionary adaptation to wood decay and genome diversity remains incomplete. We combined the genome sequence information from 50 Polyporales species, including 26 newly sequenced genomes and sought for genomic and functional adaptations to wood decay through the analysis of genome composition and transcriptome responses to different carbon sources. The genomes of Polyporales from different phylogenetic clades showed poor conservation in macrosynteny, indicative of genome rearrangements. We observed different gene family expansion/contraction histories for plant cell wall degrading enzymes in core polyporoids and phlebioids and captured expansions for genes involved in signalling and regulation in the lineages of white rotters. Furthermore, we identified conserved cupredoxins, thaumatin-like proteins and lytic polysaccharide monooxygenases with a yet uncharacterized appended module as new candidate players in wood decomposition. Given the current need for enzymatic toolkits dedicated to the transformation of renewable carbon sources, the observed genomic diversity among Polyporales strengthens the relevance of mining Polyporales biodiversity to understand the molecular mechanisms of wood decay.
59 BASIC BIOLOGICAL SCIENCES↗
Signatures of cysteine oxidation on muscle structural and contractile proteins are associated with physical performance and muscle function in older adults: Study of Muscle, Mobility and Aging (SOMMA)
Oxidative stress is considered a contributor to declining muscle function and mobility during aging; however, the underlying molecular mechanisms remain poorly described. We hypothesized that greater levels of cysteine (Cys) oxidation on muscle proteins are associated with decreased measures of mobility. Herein, we applied a novel redox proteomics approach to measure reversible protein Cys oxidation in vastus lateralis muscle biopsies collected from 56 subjects in the Study of Muscle, Mobility and Aging (SOMMA), a community-based cohort study of individuals aged 70 years and older. We tested whether levels of Cys oxidation on key muscle proteins involved in muscle structure and contraction were associated with muscle function (leg power and strength), walking speed, and fitness (VO 2 peak on cardiopulmonary exercise testing) using linear regression models adjusted for age, sex, and body weight. Higher oxidation levels of select nebulin Cys sites were associated with lower VO 2 peak, while greater oxidation of myomesin-1, myomesin-2, and nebulin Cys sites was associated with slower walking speed. Higher oxidation of Cys sites in key proteins such as myomesin-2, alpha-actinin-2, and skeletal muscle alpha-actin were associated with lower leg power and strength. We also observed an unexpected correlation (R = 0.48) between a higher oxidation level of eight Cys sites in alpha-actinin-3 and stronger leg power. Despite this observation, the results generally support the hypothesis that Cys oxidation of muscle proteins impairs muscle power and strength, walking speed, and cardiopulmonary fitness with aging.
59 BASIC BIOLOGICAL SCIENCES↗
Signatures of Selection for Resistance/Tolerance to Perkinsus olseni in Grooved Carpet Shell Clam ( Ruditapes decussatus ) Using a Population Genomics Approach
ABSTRACT The grooved carpet shell clam ( Ruditapes decussatus ) is a bivalve of high commercial value distributed throughout the European coast. Its production has suffered a decline caused by different factors, especially by the parasite Perkinsus olsenii . Improving production of R . decussatus requires genomic resources to ascertain the genetic factors underlying resistance/tolerance to P. olseni i . In this study, the first reference genome of R . decussatus was assembled through long‐ and short‐read sequencing (1677 contigs; 1.386 Mb) and further scaffolded at chromosome level with Hi‐C (19 superscaffolds; 95.4% of assembly). Repetitive elements were identified (32%) and masked for annotation of 38,276 coding‐ and 13,056 non‐coding genes. This genome was used as a reference to develop a 2bRAD‐Seq 13,438 SNP panel for a genomic screening on six shellfish beds distributed across the Atlantic Ocean and Mediterranean Sea. Beds were selected by perkinsosis prevalence and the infection level was individually evaluated in all the samples. Genetic diversity was significantly higher in the Mediterranean than in the Atlantic region. The main genetic breakage was detected between those regions (F ST = 0.224), being the Mediterranean more heterogeneous than the Atlantic. Several loci under divergent selection (394 outliers; 261 genomic windows) were detected across shellfish beds. Samples were also inspected to detect signals of selection for resistance/tolerance to P. olseni i by using infection‐level and population‐genomics approaches, and 90 common divergent outliers for resistance/tolerance to perkinsosis were identified and used for gene mining. Candidate genes and markers identified provide invaluable information for controlling perkinsosis and for improving production of the grooved carpet shell clam.
Sambade, Inés M. [Department of Zoology, Genetics ↗
Genome-wide DNA methylation patterns harbour signatures of hatchling sex and past incubation temperature in a species with environmental sex determination
Conservation of thermally sensitive species depends on monitoring organismal and population-level responses to environmental change in real time. Epigenetic processes are increasingly recognized as key integrators of environmental conditions into developmentally plastic responses, and attendant epigenomic data sets hold potential for revealing cryptic phenotypes relevant to conservation efforts. Here, we demonstrate the utility of genome-wide DNA methylation (DNAm) patterns in the face of climate change for a group of especially vulnerable species, those with temperature-dependent sex determination (TSD). Due to their reliance on thermal cues during development to determine sexual fate, contemporary shifts in temperature are predicted to skew offspring sex ratios and ultimately destabilize sensitive populations. Using reduced-representation bisulphite sequencing, we profiled the DNA methylome in blood cells of hatchling American alligators (Alligator mississippiensis), a TSD species lacking reliable markers of sexual dimorphism in early life stages. We identified 120 sex-associated differentially methylated cytosines (DMCs; FDR < 0.1) in hatchlings incubated under a range of temperatures, as well as 707 unique temperature-associated DMCs. We further developed DNAm-based models capable of predicting hatchling sex with 100% accuracy (in 20 training samples and four test samples) and past incubation temperature with a mean absolute error of 1.2°C (in four test samples) based on the methylation status of 20 and 24 loci, respectively. Though largely independent of epigenomic patterning occurring in the embryonic gonad during TSD, DNAm patterns in blood cells may serve as nonlethal markers of hatchling sex and past incubation conditions in conservation applications. These findings also raise intriguing questions regarding tissue-specific epigenomic patterning in the context of developmental plasticity.
59 BASIC BIOLOGICAL SCIENCES↗