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TH-C-204-03: Writing Good Scientific Papers and Responding to Critiques

In this presentation, the Editors will outline our vision for the future of Medical Physics and review recent work-in-progress initiatives to implement this vision. Finally, we will close with guidance to authors on how to write a good Medical Physics paper. A major focus will be the transition to a new publisher in 2017 following a more than 40-year association with American Institute of Physics Publishing (AIPP). Vision for Medical Physics and status of current initiatives: Jeff Williamson, Editor-in-Chief The broad vision of Medical Physics is “to continue the Journal’s tradition of publishing the very best science that propels our discipline forward and improves our contribution to patient care.” More concretely, the Journal should be the preeminent forum for exchange of cutting edge medical physics science. We seek to identify the best contributions in (a) high impact clinical physics innovations; (b) clinical translation and validation of basic science innovations; and (c) cutting edge basic science developments with potential for patient care improvements. Among the challenges and opportunities, we face are: electronic-only and open access publishing; competition from new radiological science journals; trends towards more interactive, social-media based scientific communities; and diversification of the medical physics research, authorship, and readership domains, including clinical applications quite foreign to core ABR clinical competencies. Recently implemented and ongoing initiatives include: Revised Table of Contents (TOC) and more contemporary topical submission categories Structured review template in HTML format Comprehensive hierarchical taxonomy for identifying reviewer expertise Formal process for soliciting high quality and impact Review and Vision 20/20 Articles We have recruited four Review Article Co-editors: John Rowlands and Ingrid Reiser (imaging physics) and Joao Seco and Tim Zhu (therapy physics). The Co-Editors will identify timely topics and solicit high profile authors to submit review manuscripts. To submit an article, authors will need to work with an assigned Co-Editor to develop a mutually acceptable outline and abstract. 5) A new and exciting class of articles: Medical Physics Dataset Articles (MPDAs) MPDAs describe scientifically or clinically valuable open-access datasets with high potential for contributing to the research of medical physicists working on related problems. In contrast to Research Articles, MPDAs should not include hypothesis testing; or data analyses supporting generalizable conclusions. The publically accessible dataset must be permanently archived before the MPDA can be published. This initiative is being led by Joe Deasy. Update on new publisher transition: The transition of AAPM scientific publishing operations to a major publishing house is a major opportunity to expand Medical Physics readership and its scholarly impact. The advantages include: (a) common manuscript management and web hosting platforms for Medical Physics and its sister journal, JACMP; (b) greater than 4-fold expansion of subscribing institutions; and (c) resources to mount data-driven, highly targeted marketing campaigns to enhance citation and download rates. A transition update of this epochal development, which has only begun as of this writing (3/31/16), will be given. Improving manuscript quality via structured reviews, enhanced scientific category taxonomy, and outreach: Shiva Das, Therapy Physics Editor Medical Physics is committed to continuous improvement with the ultimate goal of improving the potential impact of accepted manuscripts. In order to do so, Medical Physics must be able to tap into important/emerging areas and be able to select high quality contributions consistently via discerning reviews. Improving the quality of reviews is crucial to selecting high quality manuscripts and also to improving manuscript impact via feedback in the review process. With this in mind, Medical Physics is in the process of: (a) fostering outreach to important areas that are currently underrepresented in Medical Physics; (b) implementing a structured template review form; and (c) implementing a comprehensive scientific category taxonomy to identify reviewers who are best suited to an article. Outreach efforts have begun to various scientific areas. Strategies to increase submissions from these areas will be discussed. As a consequence of this effort, a special issue on particle therapy is under development. A review template was implemented in late 2014 on a limited test basis. Based on reviewer feedback, the template was restructured and shortened to capture essential review elements. The restructured template is due to be released shortly. The new scientific category taxonomy is in the process of being deployed to reviewers and associate editors. Salient aspects of the structured review template and scientific category taxonomy will be discussed in this talk. Writing good scientific papers and responding to critiques: Mitch Goodsitt, Imaging Physics Editor The essential components of the abstract, introduction, methods, discussion and conclusion sections of manuscripts, as well as the desired writing style and style of the figures and tables will be reviewed. Publishable Medical Physics manuscripts must include clear and concise statements of the novelty and clinical and/or scientific importance of the authors’ work. Examples of novelty include: new technical solution to an important clinical problem; new generalizable knowledge; and first demonstration that an existing engineering solution solves a clinical problem. Please note that we encourage authors of recently published conference proceedings (e.g., SPIE, IEEE) papers on novel medical physics related work to submit more substantial versions of that work to our journal. All submissions must include: sufficient background information and rationale; enough detail for others to reproduce the authors’ work; sufficient statistical analysis to refute or validate the authors’ hypotheses; a description of how the present work compares to, is distinct from, and improves upon others’ work; and sections devoted to the limitations of the study and future directions. Writing should be polished. Poor wording, grammar and composition frustrate the review process. Our journal does not have copyeditors for revising manuscripts. When authors receive critiques from the referees and associate editor, the authors should provide a detailed point-by-point response to each comment. The authors’ rebuttal should include the text of the original criticism, the authors’ response, and a pasted copy of the modified text along with the line numbers in the revised article. The new text should be highlighted in a different font color in the revised submission. Following these recommendations will improve submissions and facilitate the review process.

60 APPLIED LIFE SCIENCES↗

Stability Analysis of Inline ZFP Compression for Floating-Point Data in Iterative Methods

Currently, the dominating constraint in many high performance computing applications is data capacity and bandwidth, in both internode communications and even moreso in intranode data motion. A new approach to address this limitation is to make use of data compression in the form of a compressed data array. Storing data in a compressed data array and converting to standard IEEE-754 types as needed during a computation can reduce the pressure on bandwidth and storage. However, repeated conversions (lossy compression and decompression) introduce additional approximation errors, which need to be shown to not significantly affect the simulation results. Here, we extend recent work that analyzed the error of a single use of compression and decompression of the ZFP compressed data array representation to the case of time-stepping and iterative schemes, where an advancement operator is repeatedly applied in addition to the conversions. We show that the accumulated error for iterative methods involving fixed-point and time evolving iterations is bounded under standard constraints. An upper bound is established on the number of additional iterations required for the convergence of stationary fixed-point iterations. An additional analysis of traditional forward and backward error of stationary iterative methods using ZFP compressed arrays is also presented. The results of several 1D, 2D, and 3D test problems are provided to demonstrate the correctness of the theoretical bounds.

97 MATHEMATICS AND COMPUTING↗

A Bilevel Approach for Identifying the Worst Contingencies for Nonconvex Alternating Current Power Systems

We address the bilevel optimization problem of identifying the most critical attacks to an alternating current (AC) power flow network. The upper-level binary maximization problem consists of choosing an attack that is treated as a parameter in the lower-level defender minimization problem. Instances of the lower-level global minimization problem by themselves are NP-hard due to the nonconvex AC power flow constraints, and bilevel solution approaches commonly apply a convex relaxation or approximation to allow for tractable bilevel reformulations at the cost of underestimating some power system vulnerabilities. Our main contribution is to provide an alternative branch-and-bound algorithm whose upper bounding mechanism (in a maximization context) is based on a reformulation that avoids relaxation of the AC power flow constraints in the lower-level defender problem. Lower bounding is provided with semidefinite programming (SDP) relaxed solutions to the lower-level problem. We establish finite termination with guarantees of either a globally optimal solution to the original bilevel problem, or a globally optimal solution to the SDP-relaxed bilevel problem which is included in a vetted list of upper-level attack solutions, at least one of which is a globally optimal solution to the bilevel problem. We demonstrate through computational experiments applied to IEEE case instances both the relevance of our contribution, and the effectiveness of our contributed algorithm for identifying power system vulnerabilities without resorting to convex relaxations of the lower-level problem. We conclude with a discussion of future extensions and improvements.

97 MATHEMATICS AND COMPUTING↗

Algorithms for Efficient Reproducible Floating Point Summation

We define “reproducibility” as getting bitwise identical results from multiple runs of the same program, perhaps with different hardware resources or other changes that should not affect the answer. Many users depend on reproducibility for debugging or correctness. However, dynamic scheduling of parallel computing resources, combined with nonassociative floating point addition, makes reproducibility challenging even for summation, or operations like the BLAS. We describe a “reproducible accumulator” data structure (the “binned number”) and associated algorithms to reproducibly sum binary floating point numbers, independent of summation order. We use a subset of the IEEE Floating Point Standard 754-2008 and bitwise operations on the standard representations in memory. Our approach requires only one read-only pass over the data, and one reduction in parallel, using a 6-word reproducible accumulator (more words can be used for higher accuracy), enabling standard tiling optimization techniques. Summing n words with a 6-word reproducible accumulator requires approximately 9 n floating point operations (arithmetic, comparison, and absolute value) and approximately 3 n bitwise operations. The final error bound with a 6-word reproducible accumulator and our default settings can be up to 2 29 times smaller than the error bound for conventional (recursive) summation on ill-conditioned double-precision inputs.

Computer Science↗

Spatiotemporal Variability of Electric System Reliability Metrics

As urbanization continues to grow, urban density also rises, placing significant stress on critical infrastructure. Cities often face challenges in investing in new infrastructure or upgrading existing ones. One area of infrastructure that has come under strain is the electric grid, leading to prolonged power outages. According to data from the U.S. Energy Information Administration, the average duration of power outages has steadily doubled from 2013 to 2021, primarily due to extreme weather events. The IEEE has developed a series of reliability metrics to assess the reliability of the electric system. However, these metrics are only applied at the utility level, making it challenging to comprehend the variations in these indices at finer spatial resolutions and, consequently, evaluate reliability at the non-utility level. In this study, we leveraged electric outage data collected at 15-minute intervals at the county level to estimate electric system reliability over a six-year period using a novel data analysis approach. Our findings reveal a gradual decline in reliability in the U.S. Southwest compared to national averages. Furthermore, the duration of outages per customer per event has significantly decreased in large portions of California and Florida. These discoveries can be valuable for utility companies as they seek to pinpoint regional anomalies and plan for prioritized remediation efforts.

Singh, Nagendra↗

Data Readiness for AI: A 360-Degree Survey

Artificial Intelligence (AI) applications critically depend on data. Poor-quality data produces inaccurate and ineffective AI models that may lead to incorrect or unsafe use. Evaluation of data readiness is a crucial step in improving the quality and appropriateness of data usage for AI. R&D efforts have been spent on improving data quality. However, standardized metrics for evaluating data readiness for use in AI training are still evolving. In this study, we perform a comprehensive survey of metrics used to verify data readiness for AI training. This survey examines more than 140 papers published by ACM Digital Library, IEEE Xplore, journals such as Nature, Springer, and Science Direct, and online articles published by prominent AI experts. This survey aims to propose a taxonomy of data readiness for AI (DRAI) metrics for structured and unstructured datasets. We anticipate that this taxonomy will lead to new standards for DRAI metrics that would be used for enhancing the quality, accuracy, and fairness of AI training and inference.

97 MATHEMATICS AND COMPUTING↗

Generative Vulnerability Assessment for Cyber-Physical Systems

Cyber-physical systems (CPS) are highly susceptible to malicious attacks due to their complex dynamics and interconnectivity. A comprehensive understanding of their vulnerabilities is essential for designing effective resilience measures. This paper presents a data-driven attack generative system for evaluating the vulnerability of CPS. The proposed approach formulates the vulnerability assessment problem as determining the feasibility of a specific attack set based on two boundary functions that represent the effectiveness and stealthiness of attacks. The attack generative model is trained using a custom loss function, with two universal approximators designed to learn the effectiveness and stealthiness functions simultaneously. Theoretical results for successful generation and asymptotic convergence of the resulting training algorithm are given. As a result, the proposed approach is evaluated via numerical simulation of an IEEE 14-bus system and gas pipeline systems, demonstrating its viability in learning how to attack nonlinear CPS and identify potential vulnerabilities.

Computer systems organization↗

Hydrogen and Battery Storage Technologies for Low-Cost Energy Decarbonization in Distribution Networks

Deep energy decarbonization cannot be achieved without high penetration of renewables. At higher renewable energy penetrations, the variability and intermittent nature of solar photovoltaic (PV) electricity can cause ramping issues with existing fossil fuel generation, requiring longer term energy storage to increase the reliability of grid operation. Here, a proton exchange membrane electrolyzer can produce H 2 and serves as a utility controllable load. The produced H 2 can then be stored and converted back into electricity, or mixed with natural gas, or used as transportation fuel, or chemical feedstock. This paper considers the perspective of the distribution system operator that operates the distributed energy resources on a standard IEEE 33-node distribution network considering the technical and physical constraints with the goal of minimizing total investment and operation cost. Different case studies, at very high PV penetrations are considered to show the challenges and path to net-zero emission energy production using H 2 energy. Sensitivity of utility PV costs and electrolyzer capital costs on producing H 2 at $\$1$ /kg are presented showing that the distribution network could produce 100% renewable electricity and H 2 could be produced at a cost of $\$1$ /kg by 2050 with conservative cost estimates and by 2030 with accelerated cost declines.

25 ENERGY STORAGE↗

bifacialVF - Bifacial PV View Factor model [SWR 17-58]

bifacialvf is a self-contained view factor (or configuration factor) model which replicates a 5-row PV system of infinite extent perpendicular to the module rows. Single-axis tracking is supported, and hourly output files based on TMY inputs are saved. Spatial nonuniformity is reported, with multiple rear-facing irradiances collected on the back of each module row. Bilinear interpolation code add-on to bifacialvf (description below) to pre-generate IV arrays and bifacial coefficients, and to examine the energy production with back side irradiance mismatch for either a portrait or landscape module. Included are IV curves and bifacial info for a Yingli (standard) module. Based on the publication: "A Practical Irradiance Model for Bifacial PV Modules" B. Marion, S. MacAlpine, C. Deline, A. Asgharzadeh, F. Toor, D. Riley, J. Stein, C. Hansen 2017 IEEE Photovoltaic Specialists Conference, Washington DC, 2017 URL: https://www.nrel.gov/docs/fy17osti/67847.pdf

Deline, Chris↗

Topology Reconfiguration and distributed Volt Var Control (TR-dVVC) v1

Topology Reconfiguation is a simple algorithm to choose a network configuration with the least losses in a system with high penetration of renewable energy. It uses a linearized optimal power flow algorithm to identify the optimal setpoints of PV in a system, then performs an exhaustive search of switch configurations to find the loss minimizing solution, it repeats this process until convergence. At the end, the operator has a switch schedule for a 24 hour period that should minimize losses. VVC is a distributed algorithm in which PV units drive voltage at points within the network to 1 per unit through reactive power control. The VVC algorithm relies on extremum seeking control to provide the control. The software package is a simulation of VVC on a standard IEEE 34 bus three phase network.

MacDonald, Jason↗

GridDS: Data Science Toolkit for Energy Grid Data

According to the U.S. Energy Information Administration (EIA), the demand for energy is expected to increase 50% by the year 20501. While energy standards, such as the Institute of Electrical and Electronics Engineers (IEEE) Standard 1547, (Basso 2015) and monitoring with wide area management systems (WAMS) (Liu 2017, Zhou 2016) have enabled large scale data collection and storage, the application of this data in mitigating costs associated with increased consumer demand is an ongoing focus for energy research. This ubiquitous data collection presents a promising opportunity for machine learning and data science to improve efficiency of distributed energy resources (DERs). The GridDS software toolkit is designed to leverage advanced metering infrastructure (AMI), outage management systems data (OMS), Supervisory control Data Acquisition (SCADA), and geographic information systems (GIS) to forecast future energy demands and detect incipient grid failures. GridDS is a python software library designed to be modular and generalizable to data recorded by DERs. In adapting to disparate datasets recorded by various WAMS, GridDS provides a range of unique functionality not presently implemented in current WAMS which have highly specific software infrastructure by design. GridDS functionality ranges from data specification and preparation, to training and validation for state of the art machine learning, to interactive data visualization. For data intake, GridDS combines: Pandera: a library for creating data specifications. TimeScaleDB: a postgresSQL database infrastructure for efficient storage of timeseries data. Dataset class: A custom dataset class / interface that ensures modularity between a range of synthetic and live recorded datasets. Is

Ladd, Alexander↗

MPC4CLR (Model-Predictive-Control-for-Critical-Load-Restoration-in-Power-Distribution-Systems) [SWR-22-24]

Model predictive control (MPC) is a system or process control technique for making decisions under uncertainty via rolling look-ahead optimizations at each control step where only the current step decisions are applied, and the rest are discarded. In this work, we developed an MPC for a critical load restoration (CLR) in power distribution systems to recover system service (electricity delivery) following an extreme event-triggered substation outage. The method considers the problem of controlling distributed energy resources (DERs) of the distribution system with the objective of achieving maximum load pick up while satisfying distribution network flow and voltage constraints. A linearized optimal power flow (OPF) model is employed to represent the physics of the network. The problem formulation is augmented with a ramping (up) reserve product for the DERs to ensure improved and upward monotonic load restoration as time evolves. Simulation analysis and performance tests are performed using a modified IEEE 13-bus test feeder integrated with wind, solar, microturbine, and energy storage battery. The software is developed using various software packages in Julia and Python. The MPC model is implemented using the JuMP optimization language in Julia while the data analytics including renewable generation and load demand forecasts, running the MPC simulation and visualizations is performed in Python.

Eseye, Abinet Tesfaye↗

Hybrid-RL-MPC4CLR (Hybird-Reinforcement-Learning-Model-Predictive-Control-for-Reserve-Policy-Assisted-Critical-Load-Restoration-in-Distribution-Grids)

Hybrid-RL-MPC4CLR was developed as a hybrid controller for active distribution grid critical load restoration, combining deep reinforcement learning (RL) and model predictive control (MPC) aiming at maximizing total restored load following an extreme event. The RL determines a policy for quantifying operating reserve requirements, thereby hedging against uncertainty, while the MPC models grid operations incorporating the RL policy actions (i.e., reserve requirements), renewable (wind and solar) power predictions, and load demand forecasts. The developers formulated the reserve requirement determination problem as a sequential decision-making problem based on the Markov Decision Process (MDP) and design an RL learning environment based on the OpenAI Gym framework and MPC simulation. The RL agent reward and MPC objective function aim to maximize and monotonically increase total restored load and minimize load shedding and renewable power curtailment. The software is developed using various software packages in Python. The MPC's optimal power flow (OPF) model is implemented using the Pyomo package, the RL simulation environment is implemented using the MPC simulation with various scenarios of renewable energy and load demand profiles and power outage beginning times, based on the OpenAI Gym framework. The RL agent training is performed using the RLlib Ray package. The RL algorithm is trained offline using historical forecasts of renewable generation and load demand profiles. Simulation analysis and performance tests are conducted using a modified IEEE 13-bus distribution test feeder containing wind turbine, photovoltaic, microturbine, and battery.

Eseye, Abinet Tesfaye↗

RLC4CLR (Reinforcement Learning Controller for Critical Load Restoration Problems)

RLC4CLR demonstrates using a reinforcement learning controller (RLC) to solve a critical load restoration (CLR) problem, which improves the grid resilience after a substation outage event. RLC4CLR consists of two parts. (1) RL environment: This environment encapsulates the CLR problem to be solved and provides interfacing functions to follow the standard OpenAI Gym format. A power system simulator, i.e., OpenDSS, is included to provide the power flow solution. Controller inputs and outputs (RL state and action) as well as the reward are defined in this environment as well. In summary, the RL environment is the problem formulation from which the RL agent can learn. (2) RL training script: The training script enables the RL agent to learn its control policy by interacting with the RL environment. For RL training, an open-sourced RL library, i.e., RLlib, is leveraged which is based on a distributed computing framework (Ray). The training script is designed to be able to be run on both local machine or the NREL HPC system. Other components of RLC4CLR include input data, e.g., grid model (standard IEEE test feeders), and other files used for results analysis.

Zhang, Xiangyu↗

bifacialVF - Bifacial PV View Factor model 2022 [SWR 17-58]

bifacialvf is a self-contained view factor (or configuration factor) model which replicates a 5-row PV system of infinite extent perpendicular to the module rows. Single-axis tracking is supported, and hourly output files based on TMY inputs are saved. Spatial nonuniformity is reported, with multiple rear-facing irradiances collected on the back of each module row. Bilinear interpolation code add-on to bifacialvf (description below) to pre-generate IV arrays and bifacial coefficients, and to examine the energy production with back side irradiance mismatch for either a portrait or landscape module. Included are IV curves and bifacial info for a Yingli (standard) module. Based on the publication: "A Practical Irradiance Model for Bifacial PV Modules" B. Marion, S. MacAlpine, C. Deline, A. Asgharzadeh, F. Toor, D. Riley, J. Stein, C. Hansen 2017 IEEE Photovoltaic Specialists Conference, Washington DC, 2017 URL: https://www.nrel.gov/docs/fy17osti/67847.pdf

Deline, Chris↗

pnnl/grid_prediction

Two datadriven predictive approaches, namely, {\em Koopman Operator Theoretic (KOT)-based} model and {\em Graph Neural Network (GNN)-based model}, to enable effective power system state predictions. The KOT-based approaches (Robust DMD, deepDMD) capture the power system evolution as a linear dynamical system on an abstract space. The GNNs model the spatio-temporal correlations using graph convolutional network and are called Spatio-Temporal Graph Convolutional Network (STGCN). These predictive models are trained, tested and compared rigorously based on their predictions of frequencies in the IEEE 68 bus system when subjected to a disturbance. GridSTAGE framework developed at Pacific Northwest National Laboratory is leveraged to generate multiple datasets (in the form of PMU measurements) for training and testing by strategically creating load changes across the spatial locations of the network

Nandanoor, Sai Pushpak↗

Adaptive Control Algorithm to Adjust Settings in Photovoltaic Inverters for Electric Grid Cybersecurity (DERAC) v0.1

Volt-VAR and Volt-Watt functionality in photovoltaic (PV) smart inverters provide mechanisms to ensure system voltage magnitudes and power factors remain within acceptable limits. However, these control functions can become unstable, introducing oscillations in system voltages when not appropriately configured or maliciously altered during a cyberattack. In the event that Volt-VAR and Volt-Watt control functions in a portion of PV smart inverters in a distribution grid are unstable, the proposed adaptation scheme utilizes the remaining and stably-behaving PV smart inverters and other Distributed Energy Resources to mitigate the effect of the instability in real-time. The adaptation mechanism is entirely decentralized, model-free, communication-free, and requires virtually no external configuration. This repository provides code to simulate the algorithm in experiments on the IEEE 37 node test feeder.

Arnold, Daniel↗

Electric Grid Simulator For Human Factor Research

The developed code simulates real-time monitor and control for west area of IEEE 118-bus system. The 24-hour load profile for each bus is derived by scaling the system’s rated load in the PSSE sav file according to the California Independent System Operator’s Day-ahead load forecast for May 1, 2024. This simulator performs several critical functions: (1) Calculating time-series power flow every 4 seconds; (2) Updating and dispatching AGC signals every minute; (3) Conducting N-1 contingency analysis every 5 minutes. Additionally, the simulator can trip lines and subsequently update and dispatch AGC signals, running power flow analysis after each tripping event.

Huang, Jianqiao [Idaho National Laboratory (INL), ↗