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At least 1,099 records · Page 61

Contributing to Long-term Wind Resource Characterization through Buoy-based Observations of Meteorological and Oceanographic Conditions

The U.S. Department of Energy (DOE) supports development of renewable power generation within the U.S. with increasing emphasis on offshore wind energy. This development is currently impeded by a lack of long-term wind observations above the ocean surface at wind turbine rotor plane heights. Pacific Northwest National Laboratory (PNNL) procured two AXYS WindSentinelTM buoys on behalf of DOE to support offshore wind resource assessment. The buoys are available for loan to qualified users according to agency priorities. The Lidar Buoy Loan Program represents an opportunity for organizations with an interest in offshore wind energy to work together with DOE to provide valuable meteorological and oceanographic data to the offshore community that is needed for offshore wind resource characterization. The buoys have already begun to fill observational gaps in offshore winds during long-term deployments off the coasts of Virginia and New Jersey and are scheduled for deployment off the coast of California in 2020. This paper provides an overview of the Lidar Buoy Loan Program, along with highlights of previous deployments, a summary of the upgrades to the lidar systems, and a discussion of the planned activities related to the buoys and the Lidar Buoy Loan Program.

floating lidar, offshore wind energy, wind resourc↗

The Contribution of Proton-Donor pKa on Reactivity Profiles of [FeFe]-hydrogenases

The [FeFe]-hydrogenases are enzymes that catalyze the reversible activation of H 2 coupled to the reduction–oxidation of electron carriers. Members of the different taxonomic groups of [FeFe]-hydrogenases display a wide range of preference, or bias, for H 2 oxidation or H 2 production reactions, despite sharing a common catalytic cofactor, or H-cluster. Identifying the properties that control reactivity remains an active area of investigation, and models have emerged that include diversity in the catalytic site coordination environments and compositions of electron transfer chains. The kinetics of proton-coupled electron transfer at the H-cluster might be expected to be a point of control of reactivity. To test this hypothesis, systematic changes were made to the conserved cysteine residue that functions in proton exchange with the H-cluster in the three model enzymes: CaI, CpII, and CrHydA1. CaI and CpII both employ electron transfer accessory clusters but differ in bias, whereas CrHydA1 lacks accessory clusters having only the H-cluster. Changing from cysteine to either serine (more basic) or aspartate (more acidic) modifies the sidechain pKa and thus the barrier for the proton exchange step. The reaction rates for H 2 oxidation or H 2 evolution were surveyed and measured for model [FeFe]-hydrogenases, and the results show that the initial proton-transfer step in [FeFe]-hydrogenase is tightly coupled to the control of reactivity; a change from cysteine to more basic serine favored H 2 oxidation in all enzymes, whereas a change to more acidic aspartate caused a shift in preference toward H 2 evolution. Overall, the changes in reactivity profiles were profound, spanning 10 5 in ratio of the H 2 oxidation-to-H 2 evolution rates. The fact that the change in reactivity follows a common trend implies that the effect of changing the proton-transfer residue pKa may also be framed as an effect on the scaling relationship between the H-cluster di(thiolmethyl)amine (DTMA) ligand pKa and E m values of the H-cluster. Experimental observations that support this relationship, and how it relates to catalytic function in [FeFe]-hydrogenases, are discussed.

59 BASIC BIOLOGICAL SCIENCES↗

Agriculture’s Potential Regional Economic Contributions to the United States Economy When Supplying Feedstock to the Bio-Economy

The economic impact of obtaining biomass could become significant to U.S. rural economies via the establishment of a bioeconomy. In 2023, the Bioenergy Technologies Office (BETO) and Oak Ridge National Laboratory provided a road map to obtain over a billion tons of biomass for conversion to bioenergy and other products. Using information from this roadmap, this study estimates the potential positive and negative economic impacts that occur because of land use change, along with increased technological advances. This is achieved by using the input–output model, IMPLAN, and impacting 179 Bureau of Economic Analysis regions in the conterminous United States. Biomass included in the analysis comprises dedicated energy crops, crop residues, and forest residues. The analysis found that managing pastures more intensively could result in releasing land to produce dedicated energy crops on 30.8 million hectares, resulting in the production of 361 million metric tons of biomass. This, coupled with crop residues from barley, corn, oats, sorghum, and wheat (162 million metric tons), plus forest residues (41 million metric tons), provide 564 million dry metric tons of biomass. Assuming the price for biomass in 2023 dollars was USD 77 per dry metric-ton, this additional production results in an economic benefit for the nation of USD 619 billion, an increase from the Business As Is scenario (Baseline) of almost USD 100 billion per year, assuming a mature biomass industry. An additional 700,000 jobs are required to grow, harvest/collect, and transport the biomass material from the land.

ForSEAM↗

IL-10 Signaling Elicited by Nivolumab-Induced Activation of the $\mathrm{MAP}$ Kinase Pathway Does Not Fully Contribute to Nivolumab-Modulated Heterogeneous T Cell Responses

Immune checkpoint inhibitor (ICI) therapy has revolutionized anti-cancer treatment for many late-stage cancer patients. However, ICI therapy has thus far demonstrated limited efficacy for most patients, and it remains unclear why this is so. Interleukin 10 (IL-10) is a cytokine that has been recognized as a central player in cancer biology with its ability to inhibit anti-tumor T cell responses. Recent studies suggest that IL-10 might also exert some intrinsic anti-tumor T cell responses, and clinical studies using recombinant IL-10 alone or in combination with ICI are underway. This paradoxical effect of IL-10 and its underlying mechanisms impacting ICI-modulated T cell responses remain poorly understood. In this study, using an in vitro mixed lymphocyte reaction assay, we found that treatment with ICIs such as the anti-programmed cell death receptor-1 (PD-1) mAb nivolumab elicits a strong expression of IL-10. While neutralization of IL-10 signaling with an anti-IL-10 specific mAb significantly decreases the production of IFN-γ by T cells in a cohort of donor cells, the opposite effect was observed in other donor cells. Similarly, neutralization of IL-10 signaling significantly decreases the expression of T cell activation markers Ki67 and CD25, as well as the production of Granzyme B in a cohort of donor cells, whereas the opposite effect was observed in others. Furthermore, we found that nivolumab and IL-10 differentially modulate the signal transducer and activator of transcription 3 (STAT3) and AKT serine–threonine kinase pathways. Finally, we found that nivolumab activates the mitogen-activated protein kinase (MAPK) pathway, which in turn is responsible for the observed induction of IL-10 production by nivolumab. These findings provide new insights into the mechanisms underlying anti-PD-1-modulated T cell responses by IL-10, which could lead to the discovery of novel combination treatments that target IL-10 and immune checkpoint molecules.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Targeted Quantification of Protein Phosphorylation and Its Contributions towards Mathematical Modeling of Signaling Pathways

Post-translational modifications (PTMs) are key regulatory mechanisms that can control protein function. Of these, phosphorylation is the most common and widely studied. Because of its importance in regulating cell signaling, precise and accurate measurements of protein phosphorylation across wide dynamic ranges are crucial to understanding how signaling pathways function. Although immunological assays are commonly used to detect phosphoproteins, their lack of sensitivity, specificity, and selectivity often make them unreliable for quantitative measurements of complex biological samples. Recent advances in Mass Spectrometry (MS)-based targeted proteomics have made it a more useful approach than immunoassays for studying the dynamics of protein phosphorylation. Selected reaction monitoring (SRM)—also known as multiple reaction monitoring (MRM)—and parallel reaction monitoring (PRM) can quantify relative and absolute abundances of protein phosphorylation in multiplexed fashions targeting specific pathways. In addition, the refinement of these tools by enrichment and fractionation strategies has improved measurement of phosphorylation of low-abundance proteins. The quantitative data generated are particularly useful for building and parameterizing mathematical models of complex phospho-signaling pathways. Potentially, these models can provide a framework for linking analytical measurements of clinical samples to better diagnosis and treatment of disease.

mathematical modeling↗

Advancing Our Understanding of Pyranopterin-Dithiolene Contributions to Moco Enzyme Catalysis

The pyranopterin dithiolene ligand is remarkable in terms of its geometric and electronic structure and is uniquely found in mononuclear molybdenum and tungsten enzymes. The pyranopterin dithiolene is found coordinated to the metal ion, deeply buried within the protein, and non-covalently attached to the protein via an extensive hydrogen bonding network that is enzyme-specific. However, the function of pyranopterin dithiolene in enzymatic catalysis has been difficult to determine. This focused account aims to provide an overview of what has been learned from the study of pyranopterin dithiolene model complexes of molybdenum and how these results relate to the enzyme systems. This work begins with a summary of what is known about the pyranopterin dithiolene ligand in the enzymes. We then introduce the development of inorganic small molecule complexes that model aspects of a coordinated pyranopterin dithiolene and discuss the results of detailed physical studies of the models by electronic absorption, resonance Raman, X-ray absorption and NMR spectroscopies, cyclic voltammetry, X-ray crystallography, and chemical reactivity.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A Cytoplasmic Receptor-like Kinase Contributes to Salinity Tolerance

Receptor-like cytoplasmic kinases (RLCKs) are receptor kinases that lack extracellular ligand-binding domains and have emerged as a major class of signaling proteins that regulate plant cellular activities in response to biotic/abiotic stresses and endogenous extracellular signaling molecules. We have identified a rice RLCK (OsRLCK311) that was significantly higher in transgenic pSARK-IPT rice (Oryza sativa) that exhibited enhanced growth under saline conditions. Overexpression of OsRLCK311 full-length protein (RLCK311FL) and the C-terminus of OsRLCK311 (ΔN) in Arabidopsis confirmed its role in salinity tolerance, both in seedlings and mature plants. Protein interaction assays indicated that OsRLCK311 and ΔN interacted in-vivo with the plasma membrane AQP AtPIP2;1. The RLCK311-PIP2;1 binding led to alterations in the stomata response to ABA, which was characterized by more open stomata of transgenic plants. Moreover, OsRLCK311-ΔN effect in mediating enhanced plant growth under saline conditions was also observed in the perennial grass Brachypodium sylvaticum, confirming its role in both dicots and monocots species. Lastly, OsRLCK311 interacted with the rice OsPIP2;1. We suggest that the rice OsRLCK311 play a role in regulating the plant growth response under saline conditions via the regulation of the stomata response to stress. This role seems to be independent of the RLCK311 kinase activity, since the overexpression of the RLCK311 C-terminus (ΔN), which lacks the kinase full domain, has a similar phenotype to RLCK311FL.

54 ENVIRONMENTAL SCIENCES↗

T Cells Contribute to Pathological Responses in the Non-Targeted Rat Heart following Irradiation of the Kidneys

Heart disease is a significant adverse event caused by radiotherapy for some cancers. Identifying the origins of radiogenic heart disease will allow therapies to be developed. Previous studies showed non-targeted effects manifest as fibrosis in the non-irradiated heart after 120 days following targeted X-irradiation of the kidneys with 10 Gy in WAG/RijCmcr rats. To demonstrate the involvement of T cells in driving pathophysiological responses in the out-of-field heart, and to characterize the timing of immune cell engagement, we created and validated a T cell knock downrat on the WAG genetic backgrou nd. Irradiation of the kidneys with 10 Gy of X-rays in wild-type rats resulted in infiltration of T cells, natural killer cells, and macrophages after 120 days, and none of these after 40 days, suggesting immune cell engagement is a late response. The radiation nephropathy and cardiac fibrosis that resulted in these animals after 120 days was significantly decreased in irradiated T cell depleted rats. We conclude that T cells function as an effector cell in communicating signals from the irradiated kidneys which cause pathologic remodeling of non-targeted heart.

60 APPLIED LIFE SCIENCES↗

Endogenic and Exogenic Contributions to Visible-wavelength Spectra of Europa’s Trailing Hemisphere

The composition of Europa’s trailing hemisphere reflects the combined influences of endogenous geologic resurfacing and exogenous sulfur radiolysis. Using spatially resolved visible-wavelength spectra of Europa obtained with the Hubble Space Telescope, we map multiple spectral features across the trailing hemisphere and compare their geographies with the distributions of large-scale geology, magnetospheric bombardment, and surface color. Based on such comparisons, we interpret some aspects of our spectra as indicative of purely exogenous sulfur radiolysis products and other aspects as indicative of radiolysis products formed from a mixture of endogenous material and magnetospheric sulfur. The spatial distributions of two of the absorptions seen in our spectra—a widespread downturn toward the near-UV and a distinct feature at 530 nm—appear consistent with sulfur allotropes previously suggested from ground-based spectrophotometry. However, the geographies of two additional features—an absorption feature at 360 nm and the spectral slope at red wavelengths—are more consistent with endogenous material that has been altered by sulfur radiolysis. We suggest irradiated sulfate salts as potential candidates for this material, but we are unable to identify particular species with the available data.

79 ASTRONOMY AND ASTROPHYSICS↗

Neutrino Production Associated with Late Bumps in Gamma-Ray Bursts and Potential Contribution to Diffuse Flux at IceCube

IceCube has detected many TeV–PeV neutrinos, but their astrophysical origins remain largely unknown. Motivated by the observed late-time X-ray/optical bumps in some gamma-ray bursts (GRBs), we examine the correlation between IceCube neutrinos and GRBs allowing delayed neutrinos ~days after the prompt gamma-rays. Although we have not found any definitive correlation, up to ~10% of the events observed so far at IceCube may have been neutrinos produced by the late-time GRB activities at ~1 day. Assuming a connection between some IceCube events and the late GRB bumps, we show in a model-independent way that GRB sites capable of producing late ~PeV neutrinos should be nonrelativistic or mildly relativistic. We estimate the diffuse neutrino flux from such sources and find that they can possibly account for a few IceCube events. Future observations of high-energy neutrinos and late-time GRB afterglows can further test the above proposed connection.

79 ASTRONOMY AND ASTROPHYSICS↗

A Swing of the Pendulum: The Chemodynamics of the Local Stellar Halo Indicate Contributions from Several Radial Merger Events

We find that the chemical abundances and dynamics of APOGEE and GALAH stars in the local stellar halo are inconsistent with a scenario in which the inner halo is primarily composed of debris from a single massive, ancient merger event, as has been proposed to explain the Gaia-Enceladus/Gaia Sausage (GSE) structure. The data contain trends of chemical composition with energy that are opposite to expectations for a single massive, ancient merger event, and multiple chemical evolution paths with distinct dynamics are present. We use a Bayesian Gaussian mixture model regression algorithm to characterize the local stellar halo, and find that the data are fit best by a model with four components. We interpret these components as the Virgo Radial Merger (VRM), Cronus, Nereus, and Thamnos; however, Nereus and Thamnos likely represent more than one accretion event because the chemical abundance distributions of their member stars contain many peaks. Although the Cronus and Thamnos components have different dynamics, their chemical abundances suggest they may be related. We show that the distinct low- and high-α halo populations from Nissen & Schuster are explained by VRM and Cronus stars, as well as some in situ stars. Because the local stellar halo contains multiple substructures, different popular methods of selecting GSE stars will actually select different mixtures of these substructures, which may change the apparent chemodynamic properties of the selected stars. We also find that the Splash stars in the Solar region are shifted to higher v $\phi$ and slightly lower [Fe/H] than previously reported.

79 ASTRONOMY AND ASTROPHYSICS↗

Novel Sensors for Particle Tracking: a Contribution to the Snowmass Community Planning Exercise of 2021

Five contemporary technologies are discussed in the context of their potential roles in particle tracking for future high energy physics applications. These include sensors of the 3D configuration, in both diamond and silicon, submicron-dimension pixels, thin film detectors, and scintillating quantum dots in gallium arsenide. Drivers of the technologies include radiation hardness, excellent position, vertex, and timing resolution, simplified integration, and optimized power, cost, and material.

Detectors↗

The Elastic Analysis Facility's (EAF's) Contribution to the Future of Analysis at Multi-Experiment Institutions and Future Colliders

The Elastic Analysis Facility (EAF) hosted at Fermi National Accelerator Laboratory (Fermilab) is a platform being developed with the goal of providing a fast and efficient facility for physics analysis. As high-energy physics moves towards collecting larger datasets, such as those from the High-Luminosity LHC, the EAF strives to provide a powerful and adaptable framework for future colliders and multi-experiment institutions. Currently, the EAF supports several experiments including CMS, NOvA, and DUNE as well as serving accelerator physicists and beam line operations through integrated software and secure connections to Fermilab's computing resources. In addition, the EAF was designed with a user-friendly interface, intended to be more intuitive for emerging generations of physicists, that is still accessible for established styles of analysis. The EAF can also achieve better analysis efficiency due to the modernization of software and tools that can better utilize Fermilab's computing power. Furthermore, its design incorporates industry standards whenever possible, enhancing its sustainability and making it a possible template for other national or international laboratories and research facilities. Overall, the EAF is a forward-looking solution that will meet the evolving needs of particle physics, ensuring readiness for future colliders and multi-experiment research institutions.

Chavez, Elise [Wisconsin U., Madison]↗

Processes contributing to cloud dissipation and formation events on the North Slope of Alaska

Abstract. Clear-sky periods across the high latitudes have profound impacts on the surface energy budget and lower atmospheric stratification; however an understanding of the atmospheric processes leading to low-level cloud dissipation and formation events is limited. A method to identify clear periods at Utqiaġvik (formerly Barrow), Alaska, during a 5-year period (2014–2018) is developed. A suite of remote sensing and in situ measurements from the high-latitude observatory are analyzed; we focus on comparing and contrasting atmospheric properties during low-level (below 2 km) cloud dissipation and formation events to understand the processes controlling clear-sky periods. Vertical profiles of lidar backscatter suggest that aerosol presence across the lower atmosphere is relatively invariant during the periods bookending clear conditions, which suggests that a sparsity of aerosol is not frequently a cause for cloud dissipation on the North Slope of Alaska. Further, meteorological analysis indicates two active processes ongoing that appear to support the formation of low clouds after a clear-sky period: namely, horizontal advection, which was dominant in winter and early spring, and quiescent air mass modification, which was dominant in the summer. During summer, the dominant mode of cloud formation is a low cloud or fog layer developing near the surface. This low cloud formation is driven largely by air mass modification under relatively quiescent synoptic conditions. Near-surface aerosol particles concentrations changed by a factor of 2 around summer formation events. Thermodynamic adjustment and increased aerosol presence under quiescent atmospheric conditions are hypothesized as important mechanisms for fog formation.

54 ENVIRONMENTAL SCIENCES↗

The Detection and Attribution Model Intercomparison Project (DAMIP v2.0) contribution to CMIP7

The first version of the Detection and Attribution Model Intercomparison Project (DAMIP v1.0) coordinated key simulations exploring the role of individual forcings in past, current and future climate as part of the Coupled Model Intercomparison Project, Phase 6 (CMIP6). The simulations have been used extensively in the literature for detection and attribution of long-term changes, constraining projections of climate change, attributing extreme events and understanding drivers of past and future simulated climate changes. Attribution studies using DAMIP v1.0 simulations underpinned prominent assessments of human-induced warming in the Intergovernmental Panel on Climate Change (IPCC) Sixth Assessment Report. Here, we describe the set of DAMIP v2.0 simulations, proposed for the next phase of CMIP, CMIP7. Detection and attribution studies rely on pre-industrial control simulations and historical simulations, which will be part of the Diagnostic, Evaluation and Characterization of Klima (DECK) set of simulations for CMIP7. In addition, we identify the three highest-priority single-forcing experiments for CMIP7 to be run as “Assessment Fast Track” simulations in support of the Seventh Assessment Report of the IPCC: simulations with natural forcings only, anthropogenic well-mixed greenhouse gases only and anthropogenic aerosols only. Beyond this, the DAMIP v2.0 experimental design includes full-column ozone-only simulations and land-use-only simulations, such that the set of individual forcing experiments, when these are considered together, represents the full set of historical forcings. While concentration-driven simulations are prioritised for attribution, emissions-driven versions of the DAMIP experiments are also proposed to support understanding of the influence of carbon-cycle feedbacks on the simulated responses to individual forcings.

Gillett, Nathan P. [Environment and Climate Change↗

The contribution of Humboldt Glacier, northern Greenland, to sea-level rise through 2100 constrained by recent observations of speedup and retreat

Abstract. Humboldt Glacier, northern Greenland, has retreated and accelerated through the 21st century, raising concerns that it could be a significant contributor to future sea-level rise. We use a data-constrained ensemble of three-dimensional higher-order ice sheet model simulations to estimate the likely range of sea-level rise from the continued retreat of Humboldt Glacier. We first solve for basal traction using observed ice thickness, bed topography, and ice surface velocity from the year 2007 in a PDE-constrained (partial differential equation) optimization. Next, we impose calving rates to match mean observed retreat rates from winter 2007–2008 to winter 2017–2018 in a transient calibration of the exponent in the power-law basal friction relationship. We find that power-law exponents in the range of 1/7–1/5 – rather than the commonly used 1/3–1 – are necessary to reproduce the observed speedup over this period. We then tune an iceberg calving parameterization based on the von Mises stress yield criterion in another transient-calibration step to approximate both observed ice velocities and terminus position in 2017–2018. Finally, we use the range of basal friction relationship exponents and calving parameter values to generate the ensemble of model simulations from 2007–2100 under three climate forcing scenarios from CMIP5 (two RCP8.5 forcings, Representative Concentration Pathway) and CMIP6 (one SSP5-8.5 forcing, Shared Socioeconomic Pathway). Our simulations predict 5.2–8.7 mm of sea-level rise from Humboldt Glacier, significantly higher than a previous estimate (∼ 3.5 mm) and equivalent to a substantial fraction of the 40–140 mm predicted by ISMIP6 from the whole Greenland Ice Sheet. Our larger future sea-level rise prediction results from the transient calibration of our basal friction law to match the observed speedup, which requires a semi-plastic bed rheology. In many simulations, our model predicts the growth of a sizable ice shelf in the middle of the 21st century. Thus, atmospheric warming could lead to more retreat than predicted here if increased surface melt promotes hydrofracture of the ice shelf. Our data-constrained simulations of Humboldt Glacier underscore the sensitivity of model predictions of Greenland outlet glacier response to warming to choices of basal shear stress and iceberg calving parameterizations. Further, transient calibration of these parameterizations, which has not typically been performed, is necessary to reproduce observed behavior. Current estimates of future sea-level rise from the Greenland Ice Sheet could, therefore, contain significant biases.

54 ENVIRONMENTAL SCIENCES↗

LANL contributions to Rayleigh

Rayleigh is a 3-D convection code designed for the study of dynamo behavior in spherical geometry. It evolves the incompressible and anelastic MHD equations in spherical geometry using a pseudo-spectral approach.

Edelmann, Philipp↗