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At least 1,081 records · Page 60

A machine learning approach for identifying variables associated with risk of developing neutralizing antidrug antibodies to factor VIII

A key unmet need in the management of hemophilia A (HA) is the lack of clinically validated markers that are associated with the development of neutralizing antibodies to Factor VIII (FVIII) (commonly referred to as inhibitors). This study aimed to identify relevant biomarkers for FVIII inhibition using Machine Learning (ML) and Explainable AI (XAI) using the My Life Our Future (MLOF) research repository. The dataset includes biologically relevant variables such as age, race, sex, ethnicity, and the variants in the F8 gene. In addition, we previously carried out Human Leukocyte Antigen Class II (HLA-II) typing on samples obtained from the MLOF repository. Using this information, we derived other patient-specific biologically and genetically important variables. These included identifying the number of foreign FVIII derived peptides, based on the alignment of the endogenous FVIII and infused drug sequences, and the foreign-peptide HLA-II molecule binding affinity calculated using NetMHCIIpan. The data were processed and trained with multiple ML classification models to identify the top performing models. The top performing model was then chosen to apply XAI via SHAP, (SHapley Additive exPlanations) to identify the variables critical for the prediction of FVIII inhibitor development in a hemophilia A patient. Using XAI we provide a robust and ranked identification of variables that could be predictive for developing inhibitors to FVIII drugs in hemophilia A patients. These variables could be validated as biomarkers and used in making clinical decisions and during drug development. The top five variables for predicting inhibitor development based on SHAP values are: (i) the baseline activity of the FVIII protein, (ii) mean affinity of all foreign peptides for HLA DRB 3, 4, & 5 alleles, (iii) mean affinity of all foreign peptides for HLA DRB1 alleles), (iv) the minimum affinity among all foreign peptides for HLA DRB1 alleles, and (v) F8 mutation type.

60 APPLIED LIFE SCIENCES↗

Rapid estimation of photosynthetic leaf traits of tropical plants in diverse environmental conditions using reflectance spectroscopy

Tropical forests are one of the main carbon sinks on Earth, but the magnitude of CO 2 absorbed by tropical vegetation remains uncertain. Terrestrial biosphere models (TBMs) are commonly used to estimate the CO 2 absorbed by forests, but their performance is highly sensitive to the parameterization of processes that control leaf-level CO 2 exchange. Direct measurements of leaf respiratory and photosynthetic traits that determine vegetation CO 2 fluxes are critical, but traditional approaches are time-consuming. Reflectance spectroscopy can be a viable alternative for the estimation of these traits and, because data collection is markedly quicker than traditional gas exchange, the approach can enable the rapid assembly of large datasets. However, the application of spectroscopy to estimate photosynthetic traits across a wide range of tropical species, leaf ages and light environments has not been extensively studied. Here, we used leaf reflectance spectroscopy together with partial least-squares regression (PLSR) modeling to estimate leaf respiration ( R dark25 ), the maximum rate of carboxylation by the enzyme Rubisco ( V cmax25 ), the maximum rate of electron transport ( J max25 ), and the triose phosphate utilization rate ( T p25 ), all normalized to 25°C. We collected data from three tropical forest sites and included leaves from fifty-three species sampled at different leaf phenological stages and different leaf light environments. Our resulting spectra-trait models validated on randomly sampled data showed good predictive performance for V cmax25 , J max25 , T p25 and R dark25 (RMSE of 13, 20, 1.5 and 0.3 μmol m -2 s -1 , and R 2 of 0.74, 0.73, 0.64 and 0.58, respectively). The models showed similar performance when applied to leaves of species not included in the training dataset, illustrating that the approach is robust for capturing the main axes of trait variation in tropical species. We discuss the utility of the spectra-trait and traditional gas exchange approaches for enhancing tropical plant trait studies and improving the parameterization of TBMs.

54 ENVIRONMENTAL SCIENCES↗

A database and meta-analysis on the performance of exploding pusher implosions conducted at OMEGA

A database of 222 exploding pusher implosions conducted at the OMEGA Laser Facility is presented. The dataset consists of glass-shell capsules filled with varying pressures of D 2 , T 2 , and 3 He, which were imploded using square laser pulses with intensities ranging from 1 to 1 × 10 15 W/cm 2 . The database includes measurements of bang times, ion temperatures, and yields from the DD, D 3 He, and DT fusion reactions. A semi-analytic exploding pusher model is introduced, which effectively captures the observed trends in the data. This model predicts that the measurements scale according to a power-law relation based on the initial capsule and laser conditions. A generalized power-law scaling relation is directly fit to each dataset, providing a useful interpolation of the entire database. Overall, the database provides a valuable resource to estimating bang times, temperatures, and yields for the design of future experiments. Additionally, it provides a diverse set of data for validating more advanced implosion physics models.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Machine Learned Empirical Numerical Integrator from Simulated Data

Recently, a number of state-of-the-art surrogate machine learning (ML) models have been designed for global weather and climate prediction, which have been trained using reanalysis data products. Reanalysis data products are constructed using numerical model simulations that combine numerical integration of partial differential equations and parameterization schemes. These products are typically only archived and made available using coarsened spatial and temporal resolutions. This study explores the impact of the numerical generation methods used to produce the training datasets and the temporal resolution of those datasets on machine learning surrogate models. Using the nonlinear vector autoregression (NVAR) machine as an explainable ML technique, simple dynamical systems are emulated with ML models trained on data produced by three classical numerical integration schemes. NVAR is validated as a skillful ML method, capable of producing accurate predictions and, more importantly, reconstructing both the underlying dynamics and the numerical integration scheme used to generate the training data. However, the machine fails to generalize predictions on unseen test data generated by different numerical integration schemes, despite the underlying dynamical system being the same. This result provides a word of caution for the growing field of machine learning emulation of weather and climate dynamics. Furthermore, we illustrate using NVAR that training on temporally coarsened data may increase the required complexity of ML models and potentially introduce new numerical challenges. Finally, we discover that empirical integration schemes with arbitrary time-stepping sizes can be constructed directly from the data, which implies a potential for the development of empirical numerical integration schemes.

54 ENVIRONMENTAL SCIENCES↗

Application of an automated machine learning-genetic algorithm (AutoML-GA) coupled with computational fluid dynamics simulations for rapid engine design optimization

In recent years, the use of machine learning-based surrogate models for computational fluid dynamics (CFD) simulations has emerged as a promising technique for reducing the computational cost associated with engine design optimization. However, such methods still suffer from drawbacks. One main disadvantage is that the default machine learning (ML) hyperparameters are often severely suboptimal for a given problem. This has often been addressed by manually trying out different hyperparameter settings, but this solution is ineffective in case of a high-dimensional hyperparameter space. Besides this problem, the amount of data needed for training is also not known a priori. In response to these issues that need to be addressed, the present work describes and validates an automated active learning approach, AutoML-GA, for surrogate-based optimization of internal combustion engines. In this approach, a Bayesian optimization technique is used to find the best machine learning hyperparameters based on an initial dataset obtained from a small number of CFD simulations. Subsequently, a genetic algorithm is employed to locate the design optimum on the ML surrogate surface. In the vicinity of the design optimum, the solution is refined by repeatedly running CFD simulations at the projected optima and adding the newly obtained data to the training dataset. It is demonstrated that AutoML-GA leads to a better optimum with a lower number of CFD simulations, compared to the use of default hyperparameters. The proposed framework offers the advantage of being a more hands-off approach that can be readily utilized by researchers and engineers in industry who do not have extensive machine learning expertise.

Owoyele, Opeoluwa↗

Solar System Expansion and Strong Equivalence Principle as Seen by the NASA MESSENGER Mission

The NASA MESSENGER mission explored the innermost planet of the solar system and obtained a rich dataset of range measurements for the determination of Mercury's ephemeris. Here we use these precise data collected over seven years to estimate parameters related to General Relativity and the evolution of the Sun. These results confirm the validity of the Strong Equivalence Principle with a significantly refined uncertainty of the Nordtvedt parameter eta=(-6.6 plus or minus 7.2)x10(exp -5) By assuming a metric theory of gravitation, we retrieved the Post-Newtonian parameter beta = 1 + (-1.6 plus or minus 1.8)x10(exp -5) and the Sun's gravitational oblateness, J(sub 2 solar)=(2.246 plus or minus 0.022)x10(exp -7). Finally, we obtain an estimate of the time variation of the Sun gravitational parameter, G (raised dot)solar mass/G solar mass =(-6.13 plus or minus 1.47)x10(exp -14), which is consistent with the expected solar mass loss due to the solar wind and interior processes. This measurement allows us to constrain |G(raised dot)|/G to be less than 4 x 10(exp -14) yr(exp -1).

Antonio Genova↗

Comparison of Raindrop Size Distribution between NASA’s S-Band Polarimetric Radar and Two-Dimensional Video Disdrometers

The ground-based-radar-derived raindrop size distribution (DSD) parameters—mass-weighted drop diameter Dmass and normalized intercept parameter NW—are the sole resource for direct validation of the National Aeronautics and Space Administration (NASA) Global Precipitation Measurement (GPM) mission Core Observatory satellite-based retrieved DSD. Both Dmass and NW are obtained from radar-measured reflectivity ZH and differential reflectivity ZDR through empirical relationships. This study uses existing relationships that were determined for the GPM ground validation (GV) program and directly compares the NASA S-band polarimetric radar (NPOL) observables of ZH and ZDR and derivedDmass and NW with those calculated by two-dimensional video disdrometer (2DVD). The joint NPOL and 2DVD datasets were acquired during three GPM GV field campaigns conducted in eastern Iowa, southern Appalachia, and western Washington State. The comparative study quantifies the level of agreement for ZH, ZDR, Dmass, and log(NW) at an optimum distance (15–40 km) from the radar as well as at distances greater than 60 km from radar and over mountainous terrain. Interestingly, roughly 10%–15% of the NPOL ZH–ZDR pairs were well outside the envelope of 2DVD-estimated ZH–ZDR pairs. The exclusion of these pairs improved the comparisons noticeably.

Ali Tokay↗

Dataset from: Improved multispecies Dougherty collisions

The Dougherty model Fokker-Planck operator is extended to describe nonlinear full-f collisions between multiple species in plasmas. Simple relations for cross-species primitive moments are developed which obey conservation laws, and reproduce familiar velocity and temperature relaxation rates. This treatment of multispecies Dougherty collisions, valid for arbitrary mass ratios, avoids unphysical temperatures and satisfies the H-theorem unlike an analogous Bhatnagar-Gross-Krook operator. Formulas for both a Cartesian velocity-space and a gyroaveraged operator are provided for use in Vlasov as well as long-wavelength gyrokinetic models. We present an algorithm for the discontinuous Galerkin discretization of this operator, and provide results from relaxation and Landau damping benchmarks.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

BISON validation to in situ cladding burst test and high-burnup LOCA experiments

The process for developing and qualifying nuclear fuels for commercial nuclear application requires fundamental material development, characterization, and design; out-of-pile testing on unirradiated materials; integral fuel rod irradiations, testing, and postirradiation examinations; and transient analyses. The historical approach depends on the generation of large empirical datasets and series of integral fuel rod irradiations, and this approach ultimately takes ~20 years—or sometimes longer—to acquire data through extensive sequential testing. Thus, the qualification and eventual deployment of new fuel systems constitute a long process. However, recent technological advancements have provided researchers the opportunity to perform out-of-cell, in situ measurements to assess material performance for the duration of the experiment. One such example of this capability is the use of digital image coordination and thermal imaging to assess Zircaloy cladding performance under a simulated loss-of-coolant accident (LOCA) transient condition. In situ measurements generally provide high-fidelity strain, strain rates, and temperature surface maps. This is critical for the US nuclear industry, which is actively developing a technical basis to support extending the peak rod average burnup from 62 to ~75 GWd/tU and the deployment of accident-tolerant fuel. However, the US Nuclear Regulatory Commission (NRC) outlined in its research information letter several technical issues that the industry must address before extending burnup. One topic of specific interest is understanding the cladding balloon and rupture geometry during the LOCA heat-up phase. By leveraging these advanced in situ capabilities, this work used in situ data generated from a simulated LOCA to better understand high-temperature creep and its effect on Zircaloy balloon and rupture performance. Here, this work used the BISON fuel performance code to assess the high-temperature creep model predictions with in situ data.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Delamination-informed lifecycle decisions: A dielectric and machine learning framework for composite sorting and recycling

Composite materials are widely used in aerospace, marine, and automotive sectors due to their high strength-to-weight ratio and durability. However, their long-term reliability can be compromised by damage accumulation. Specifically, delamination initiation serves as a precursor to structural failure, which is often difficult to detect during damage inspection. Identifying and sorting delamination initiation in samples not only increases operational safety while providing critical information for end-of-life decisions, which influences both the service life extension value and the efficiency of fiber extraction during recycling. This research addresses two challenges: (1) developing a nondestructive, ex-situ framework to sort composite materials based on damage severity, particularly delamination, and (2) understanding how damage in composites influences resin removal during pyrolysis. Both experimental work and finite element analysis were performed to predict critical stress levels that are associated with delamination onset. Based on these results, three loading levels 50 %, 75 %, and 90 % of maximum stress, were selected for controlled experiments, generating composite samples with varying extents of damage for machine learning model training. Microscopic imaging of these samples confirmed the damage progression from matrix cracking to delamination, validating the computational predictions. We explored supervised machine learning using dielectric measurements to classify damage states. Preliminary results show an artificial neural network can identify early delamination which is a potential precursor to failure, with 94.44 % accuracy on our dataset. A parallel investigation into the effect of damage severity on pyrolysis recycling showed that heavily delaminated samples required significantly less energy for comparable matrix removal than undamaged samples.

dielectric variables↗

Performance testing of a Compton suppressed coincidence measurements using the Advanced Radionuclide Gamma-spectrOmeter

A Compton-suppressed multidimensional gamma-spectrometer is being developed within the Shallow Underground Laboratory (SUL) at Pacific Northwest National Laboratory (PNNL, USA). This Advanced Radionuclide Gamma-spectrOmeter (ARGO) system consists of two Broad Energy Germanium (BEGe) detectors, surrounded by a 12-detector sodium iodide (NaI) Compton suppression shield, situated inside a low-background lead and copper shield, fitted with a cosmic veto background reduction system. The detector has advanced functionality, including operation in single or combined detector mode, coincidence mode and Compton suppressed coincidence mode. Validation experiments measuring a neutron irradiated natural uranium sample, have demonstrated order of magnitude improvements in gamma detection sensitivity compared to conventional gamma-spectrometry techniques. Importantly this research demonstrates the feasibility of processing and analysing high-multiplicity datasets and the potential for high-sensitivity radionuclide measurements.

ARGO↗

Viscosity in water from first-principles and deep-neural-network simulations

Abstract We report on an extensive study of the viscosity of liquid water at near-ambient conditions, performed within the Green-Kubo theory of linear response and equilibrium ab initio molecular dynamics (AIMD), based on density-functional theory (DFT). In order to cope with the long simulation times necessary to achieve an acceptable statistical accuracy, our ab initio approach is enhanced with deep-neural-network potentials (NNP). This approach is first validated against AIMD results, obtained by using the Perdew–Burke–Ernzerhof (PBE) exchange-correlation functional and paying careful attention to crucial, yet often overlooked, aspects of the statistical data analysis. Then, we train a second NNP to a dataset generated from the Strongly Constrained and Appropriately Normed (SCAN) functional. Once the error resulting from the imperfect prediction of the melting line is offset by referring the simulated temperature to the theoretical melting one, our SCAN predictions of the shear viscosity of water are in very good agreement with experiments.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Auto-generating databases of Yield Strength and Grain Size using ChemDataExtractor

Abstract The emerging field of material-based data science requires information-rich databases to generate useful results which are currently sparse in the stress engineering domain. To this end, this study uses the’materials-aware’ text-mining toolkit, ChemDataExtractor, to auto-generate databases of yield-strength and grain-size values by extracting such information from the literature. The precision of the extracted data is 83.0% for yield strength and 78.8% for grain size. The automatically-extracted data were organised into four databases: a Yield Strength, Grain Size, Engineering-Ready Yield Strength and Combined database. For further validation of the databases, the Combined database was used to plot the Hall-Petch relationship for, the alloy, AZ31, and similar results to the literature were found, demonstrating how one can make use of these automatically-extracted datasets.

36 MATERIALS SCIENCE↗

FL‐ADS: Federated learning anomaly detection system for distributed energy resource networks

Abstract With the ongoing development of Distributed Energy Resources (DER) communication networks, the imperative for strong cybersecurity and data privacy safeguards is increasingly evident. DER networks, which rely on protocols such as Distributed Network Protocol 3 and Modbus, are susceptible to cyberattacks such as data integrity breaches and denial of service due to their inherent security vulnerabilities. This paper introduces an innovative Federated Learning (FL)‐based anomaly detection system designed to enhance the security of DER networks while preserving data privacy. Our models leverage Vertical and Horizontal Federated Learning to enable collaborative learning while preserving data privacy, exchanging only non‐sensitive information, such as model parameters, and maintaining the privacy of DER clients' raw data. The effectiveness of the models is demonstrated through its evaluation on datasets representative of real‐world DER scenarios, showcasing significant improvements in accuracy and F1‐score across all clients compared to the traditional baseline model. Additionally, this work demonstrates a consistent reduction in loss function over multiple FL rounds, further validating its efficacy and offering a robust solution that balances effective anomaly detection with stringent data privacy needs.

Purohit, Shaurya [Iowa State University Ames Iowa ↗

1-D Convolutional Graph Convolutional Networks for Fault Detection in Distributed Energy Systems

This paper presents a 1-D convolutional and graph convolutional networks for fault detection in microgrids. The combination of 1-D convolutional neural networks (1D-CNN) and graph convolutional networks (GCN) helps extract both spatial-temporal correlations from the voltage measurements in microgrids. The fault detection scheme includes fault event detection, fault type and phase classification, and fault location. There are five neural network model training to handle these tasks. Transfer learning and fine-tuning are applied to reduce training efforts. The combined 1-D convolutional and graph convolutional networks (1D-CGCN) is compared with the traditional ANN structure on the Potsdam 13-bus microgrid dataset. The accuracy of 99.5%, 98.4%, 99.2%, and 95.5% are achieved in fault event detection, fault type classification, fault phase identification, and fault location respectively. The detailed confusion matrices of fault type and fault phase classification are provided for validation.

deep neural network↗

Fracture Strength Determination Methods for Ceramic Materials Applied to Uranium Dioxide

The Advanced Fuels Campaign is currently focusing on development of accident-tolerant fuels that possess a range of property modifications intended to improve fuel performance during accident and transient conditions as well as extend license limits to burnups beyond 62 MWd/kgU. Both of these drivers have identified understanding and mitigating fuel cracking as a key performance criterion. Small-scale cantilever beam testing has been identified as a plausible method by which to collect fracture data for UO 2 as a function of chemical and structural evolutions introduced either during fabrication or irradiation. While this method has been found to be capable of providing data that are in reasonable agreement with literature for unirradiated UO 2 , the inherently small sample volumes that can be sampled limit its ability to capture the statistical nature of mechanisms that govern the fracture of brittle ceramics. A biaxial flexure strength test was developed to be used for unirradiated UO 2 . This method is standard in the community, but no systems presently in use at national laboratories, universities, or private companies are available to be used for nuclear fuel materials. This report describes the operation and benchmarking of this system, which has been validated for a number of common oxides. Future work will extend this system to characterization of both doped UO 2 and other relevant microstructural modifications that can also be measured using small-scale cantilever beam testing. Comparison of datasets collected using both methods will allow the overall applicability of small-scale techniques to be assessed and provide confidence or bounds on their use for irradiated fuels.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

High-Order Hybrid RANS-LES Study of NACA0012 Wing Sections

We develop hybrid RANS-LES strategies within Nek5000 for application to airfoil sections at small flight configurations. We present a validation and verification study of $k \space – \space \tau$ SST applied to a NACA 0012 wing section in a pure RANS and in a hybrid RANS-LES setup. The study shows good corroboration with existing experimental and numerical datasets. We also analyze some of the observed discrepancies with the experiments by evaluating the side wall “blocking” effect. We demonstrate that for the hybrid turbulence modeling approach a high-order spectral- element discretization converges faster (i.e., with less resolution) than a representative low-order finite-volume-based approach.

42 ENGINEERING↗

Evaluation of CLARA-A2 and ISCCP-H Cloud Cover Climate Data Records over Europe with ECA&D Ground-Based Measurements

Clouds are of high importance for the climate system but they still remain one of its principal uncertainties. Remote sensing techniques applied to satellite observations have assisted tremendously in the creation of long-term and homogeneous data records; however, satellite data sets need to be validated and compared with other data records, especially ground measurements. In the present study, the spatiotemporal distribution and variability of Total Cloud Cover (TCC) from the Satellite Application Facility on Climate Monitoring (CM SAF) Cloud, Albedo And Surface Radiation dataset from AVHRR data—edition 2 (CLARA-A2) and the International Satellite Cloud Climatology Project H-series (ISCCP-H) is analyzed over Europe. The CLARA-A2 data record has been created using measurements of the Advanced Very High Resolution Radiometer (AVHRR) instrument onboard the polar orbiting NOAA and the EUMETSAT MetOp satellites, whereas the ISCCP-H data were produced by a combination of measurements from geostationary meteorological satellites and the AVHRR instrument on the polar orbiting satellites. An intercomparison of the two data records is performed over their common period, 1984 to 2012. In addition, a comparison of the two satellite data records is made against TCC observations at 22 meteorological stations in Europe, from the European Climate Assessment & Dataset (ECA&D). The results indicate generally larger ISCCP-H TCC with respect to the corresponding CLARA-A2 data, in particular in the Mediterranean. Compared to ECA&D data, both satellite datasets reveal a reasonable performance, with overall mean TCC biases of 2.1 and 5.2% for CLARA-A2 and ISCCP-H, respectively. This, along with the higher correlation coefficients between CLARA-A2 and ECA&D TCC, indicates the better performance of CLARA-A2 TCC data.

Tzallas, Vasileios↗