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At least 1,081 records · Page 60

Human cytochrome P450 17A1 structures with metabolites of prostate cancer drug abiraterone reveal substrate-binding plasticity and a second binding site

Abiraterone acetate is a first-line therapy for castration-resistant prostate cancer. This prodrug is deacetylated in vivo to abiraterone, which is a potent and specific inhibitor of cytochrome P450 17A1 (CYP17A1). CYP17A1 performs two sequential steps that are required for the biosynthesis of androgens that drive prostate cancer proliferation, analogous to estrogens in breast cancer. Abiraterone can be further metabolized in vivo on the steroid A ring to multiple metabolites that also inhibit CYP17A1. Despite its design as an active-site-directed substrate analog, abiraterone and its metabolites demonstrate mixed competitive/noncompetitive inhibition. To understand their binding, we solved the X-ray structures of CYP17A1 with three primary abiraterone metabolites. Despite different conformations of the steroid A ring and substituents, all three bound in the CYP17A1 active site with the steroid core packed against the I helix and the A ring C3 keto or hydroxyl oxygen forming a hydrogen bond with N202 similar to abiraterone itself. The structure of CYP17A1 with 3-keto, 5α-abiraterone was solved to 2.0 Å, the highest resolution to date for a CYP17A1 complex. This structure had additional electron density near the F/G loop, which is likely a second molecule of the inhibitor and which may explain the noncompetitive inhibition. Mutation of the adjacent Asn52 to Tyr positions its side chain in this space, maintains enzyme activity, and prevents binding of the peripheral ligand. Collectively, our findings provide further insight into abiraterone metabolite binding and CYP17A1 function.

59 BASIC BIOLOGICAL SCIENCES↗

Protostellar formation in rotating interstellar clouds. II - Axially symmetric collapse

A two spatial dimension gravitational hydrodynamics code has been used to calculate the initial isothermal dynamic collapse phase of axially symmetric, rotating interstellar clouds. The Eulerian code has been constructed so as to conserve angular momentum both locally (approximately) and globally (exactly). An axially symmetric, rotating cloud collapses to form a rotating, near-equilibrium ring. The rings so formed are compared with those found previously by Black and Bodenheimer, and Bodenheimer and Tscharnuter, and found to agree in structure fairly well. Numerical tests with the code, as well as an analytic calculation of the collapse of a pressureless, rotating, axially symmetric cloud in a fixed gravitational potential, support the assertion that the observed ring formation is physically realistic.

Boss, A. P.↗

The Gas Phase Protonation Sites of Six Naturally Occurring Nicotinoids

We have determined the gas phase protonation sites of six naturally occurring nicotinoids, namely nicotine (NIC), nornicotine (NOR), anabasine (ANB), anatabine (ANT), cotinine (COT) and myosmine (MYO) from experimental cryogenic ion trap infrared spectroscopy and first principles electronic structure calculations. The structural motif of these compounds consists of a common Pyridine and a differing non-Pyridine rings. The protonation site on either of these two rings correlates with the nicotinoid’s biological activity (addiction). At room temperature NIC is a mixture of Pyridine and Pyrrolidine (non-Pyridene) protomers, NOR, ANB, ANT and COT are pure Pyridine protomers and finally MYO is mostly a Pyroline (non-Pyridine) protomer. Their biological activity (addiction) correlates with the protonation preference in the nonPyridine protomer, with the exception of MYO, which, although is protonated in the Pyroline (non-Pyridine) protomer, it is not addictive because of a conjugated p system that induces a flat structure that is not optimally interacting with the environment in the in the binding pocket of the human brain.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Composite containment systems for jet engine fan blades

The use of composites in fan blade containment systems is investigated and the associated structural benefits of the composite system design are identified. Two basic types of containment structures were investigated. The short finned concept was evaluated using Kevlar/epoxy laminates for fins which were mounted in a 6061 T-6 aluminum ring. The long fin concept was evaluated with Kevlar/epoxy, 6Al4V titanium, and 2024 T-3 aluminum fins. The unfinned configurations consisted of the base-line steel sheet, a circumferentially oriented aluminum honeycomb, and a Kevlar cloth filled ring. Results obtained show that a substantial reduction in the fan blade containment system weight is possible. Minimization of damage within the engine arising from impact interaction between blade debris and the engine structure is also achieved.

Smith, G. T.↗

F Ring Core Stability: Corotation Resonance Plus Antiresonance

The decades-or-longer stability of the narrow F Ring core in a sea of orbital chaos appears to be due to an unusual combination of traditional corotation resonance and a novel kind of "antiresonance". At a series of specific locations in the F Ring region, apse precession between synodic encounters with Prometheus allows semimajor axis perturbations to promptly cancel before significant orbital period changes can occur. This cancellation fails for particles that encounter Prometheus when it is near its apoapse, especially during periods of antialignment of its apse with that of the F Ring. At these times, the strength of the semimajor axis perturbation is large (tens of km) and highly nonsinusoidal in encounter longitude, making it impossible to cancel promptly on a subsequent encounter and leading to chaotic orbital diffusion. Only particles that consistently encounter Prometheus away from its apoapse can use antiresonance to maintain stable orbits, implying that the true mean motion nF of the stable core must be defined by a corotational resonance of the form nF = nP(-kappa)P/m, where (nP, kappaP) are Prometheus' mean motion and epicycle frequency. To test this hypothesis we used the fact that Cassini RSS occultations only sporadically detect a "massive" F Ring core, composed of several-cm-and-larger particles. We regressed the inertial longitudes of 24 Cassini RSS (and VGR) detections and 43 nondetections to a common epoch, using a comb of candidate nP, and then folded them modulo the anticipated m-number of the corotational resonance (Prometheus m = 110 outer CER), to see if clustering appears. We find the "true F Ring core" is actually arranged in a series of short longitudinal arcs separated by nearly empty longitudes, orbiting at a well determined semimajor axis of 140222.4 km (from 2005-2012 at least). Small particles seen by imaging and stellar occultations spread quickly in azimuth and obscure this clumpy structure. Small chaotic variations in the mean motion and/or apse longitude of Prometheus quickly become manifest in the F Ring core, and we suggest that the core must adapt to these changes for the F Ring to maintain stability over timescales of decades and longer

Cassini RSS occultations↗

Development of impact design methods for ceramic gas turbine components

Impact damage prediction methods are being developed to aid in the design of ceramic gas turbine engine components with improved impact resistance. Two impact damage modes were characterized: local, near the impact site, and structural, usually fast fracture away from the impact site. Local damage to Si3N4 impacted by Si3N4 spherical projectiles consists of ring and/or radial cracks around the impact point. In a mechanistic model being developed, impact damage is characterized as microcrack nucleation and propagation. The extent of damage is measured as volume fraction of microcracks. Model capability is demonstrated by simulating late impact tests. Structural failure is caused by tensile stress during impact exceeding material strength. The EPIC3 code was successfully used to predict blade structural failures in different size particle impacts on radial and axial blades.

Song, J.↗

Near Discharge Cathode Assembly Plasma Potential Measurements in a 30-cm NSTAR Type Ion Engine During Beam Extraction

Floating emissive probe plasma potential data are presented over a two-dimensional array of locations in the near Discharge Cathode Assembly (DCA) region of a 30-cm diameter ring-cusp ion thruster. Discharge plasma data are presented with beam extraction at throttling conditions comparable to the NASA TH Levels 8, 12, and 15. The operating conditions of the Extended Life Test (ELT) of the Deep Space One (DS1) flight spare ion engine, where anomalous discharge keeper erosion occurred, were TH 8 and TH 12 consequently they are of specific interest in investigating discharge keeper erosion phenomena. The data do not validate the presence of a potential hill plasma structure downstream of the DCA, which has been proposed as a possible erosion mechanism. The data are comparable in magnitude to data taken by other researchers in ring-cusp electron-bombardment ion thrusters. The plasma potential structures are insensitive to thruster throttling level with a minimum as low as 14 V measured at the DCA exit plane and increasing gradually in the axial direction. A sharp increase in plasma potential to the bulk discharge value of 26 to 28 volts, roughly 10 mm radially from DCA centerline, was observed. Plasma potential measurements indicate a low-potential plume structure that is roughly 20 mm in diameter emanating from the discharge cathode that may be attributed to a free-standing plasma double layer.

Herman, Daniel A.↗

Implementation of Fiber Optic Sensing System on Sandwich Composite Cylinder Buckling Test

The National Aeronautics and Space Administration (NASA) Engineering and Safety Center Shell Buckling Knockdown Factor Project is a multicenter project tasked with developing new analysis-based shell buckling design guidelines and design factors (i.e., knockdown factors) through high-fidelity buckling simulations and advanced test technologies. To validate these new buckling knockdown factors for future launch vehicles, the Shell Buckling Knockdown Factor Project is carrying out structural testing on a series of large-scale metallic and composite cylindrical shells at the NASA Marshall Space Flight Center (Marshall Space Flight Center, Alabama). A fiber optic sensor system was used to measure strain on a large-scale sandwich composite cylinder that was tested under multiple axial compressive loads up to more than 850,000 lb, and equivalent bending loads over 22 million in-lb. During the structural testing of the composite cylinder, strain data were collected from optical cables containing distributed fiber Bragg gratings using a custom fiber optic sensor system interrogator developed at the NASA Armstrong Flight Research Center. A total of 16 fiber-optic strands, each containing nearly 1,000 fiber Bragg gratings, measuring strain, were installed on the inner and outer cylinder surfaces to monitor the test article global structural response through high-density real-time and post test strain measurements. The distributed sensing system provided evidence of local epoxy failure at the attachment-ring-to-barrel interface that would not have been detected with conventional instrumentation. Results from the fiber optic sensor system were used to further refine and validate structural models for buckling of the large-scale composite structures. This paper discusses the techniques employed for real-time structural monitoring of the composite cylinder for structural load introduction and distributed bending-strain measurements over a large section of the cylinder by utilizing unique sensing capabilities of fiber optic sensors.

FOS↗

Parametric study of high-energy ring-shaped electron beams from a laser wakefield accelerator

Abstract Laser wakefield accelerators commonly produce on-axis, low-divergence, high-energy electron beams. However, a high charge, annular shaped beam can be trapped outside the bubble and accelerated to high energies. Here we present a parametric study on the production of low-energy-spread, ultra-relativistic electron ring beams in a two-stage gas cell. Ring-shaped beams with energies higher than 750 MeV are observed simultaneously with on axis, continuously injected electrons. Often multiple ring shaped beams with different energies are produced and parametric studies to control the generation and properties of these structures were conducted. Particle tracking and particle-in-cell simulations are used to determine properties of these beams and investigate how they are formed and trapped outside the bubble by the wake produced by on-axis injected electrons. These unusual femtosecond duration, high-charge, high-energy, ring electron beams may find use in beam driven plasma wakefield accelerators and radiation sources.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

The Effects of Peel Ply on the Damage Tolerance Characteristics of the Space Launch System (SLS) Payload Adapter Fitting (PAF)

A payload adaptor fitting (PAF) has been manufactured at NASA’s Marshall Space Flight Center (MSFC) in support of the Space Launch System (SLS) program. This structure is essentially a large cone made up of eight curved “lobes” that are joined together to form the cone. The lobes were manufactured via automated fiber placement (AFP). The PAF will carry predominantly compressive loads thus compression strength will be the focus of this study. The lobes are sandwich structure made with aluminum honeycomb core and carbon/epoxy face sheets. The lobes will be inserted into metallic rings at the top and bottom of the cone to form the full cone. Both front and back exterior surfaces of each lobe have a plain weave fabric placed at ±45⁰ to the vertical direction to help prevent fiber “breakout” during drilling. The face sheet of each lobe is thickest at the top and plies are dropped as the cone reaches the main acreage in the bottom section of the cone. The entire structure used resin impregnated peel ply that, once removed, supplies a good bonding surface for secondary bonding steps. The peel ply can be removed either directly after cure, or just before any bonding operation. Since foreign object impact can occur to the structure at any time during its life, damage tolerance of the PAF structure both with and without peel ply needed to be addressed because a previous study, albeit with limited data, showed some significant differences in damage tolerance whether the peel ply was present or not [1]. A literature search showed no results for comparing impact damage on composite laminates with and without peel ply. Load versus deflection of impact curves, visual damage, dent depth, damage as ascertained by thermography and cross-sectional microscopy were evaluated as part of the damage resistance of the structure. Compression After Impact (CAI) was performed to assess damage tolerance. The impact tests were conducted on representative specimens both with and without the peel ply present.

Sandwich Structure↗

Linear versus Bent Uranium(II) Metallocenes—A Local Vibrational Mode Study

Uranium metallocenes have recently attracted attention driven by their use as catalysts in organometallic synthesis. In addition to bent U(IV) and U(III), an U(II) metallocene [(η 5 -C 5 i Pr 5 ) 2 U] was synthesized with an unusual linear Cp–U–Cp angle. Here, in this work, we investigated 22 U(II) metallocenes, (i) assessing the intrinsic strength of the U-ring interactions in these complexes with a novel bond strength measure based on our local vibrational mode analysis and (ii) systematically exploring what makes these U(II) metallocenes bent. We included relativistic effects through the NESCau Hamiltonian and complemented the local mode analysis with natural bonding orbital (NBO) and quantum theory of atoms in molecules (QTAIM) data. Our study led to the following results: (i) reduction of bulky U-ring ligand substituents does not lead to bent complexes for alkyl substituents ( i Pr and i Bu) in contrast to SiMe 3 ring substituents, which are all bent. (ii) The most bent complexes are [(η 5 -C 5 H 4 SiMe 3 ) 2 U] (130°) and [η 5 -P 5 H 5 ) 2 U] (143°). (iii) Linear complexes showed one hybridized NBO with s/d character, while bent structures were characterized by s/d/f mixing. (iv) We did not observe a correlation between the strength of the U-ring interaction and the amount of the ring-U-ring bend; the strongest interaction was found for [η 5 -Cp) 2 U] and the weakest for [η 5 -P 5 H 5 ) 2 U]. In conclusion, our results provide a foundation for the design of U(II) metallocenes with specific physicochemical properties and increased reactivity.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Debris Disks as Tracers of Nearby Planetary Systems

Many main-sequence stars possess tenuous circumstellar dust clouds believed to trace extrasolar analogs of the Sun's asteroid and Kuiper Belts. While most of these "debris disks" are known only from far-infrared photometry, dozens are now spatially resolved. In this talk, I'll review the observed structural properties of debris disks as revealed by imaging with the Hubble, Spitzer, and Herschel Space Telescopes. I will show how modeling of the far-infrared spectral energy distributions of resolved disks can be used to constrain their dust particle sizes and albedos. I will review cases of disks whose substructures suggest planetary perturbations, including a newly-discovered eccentric ring system. I'll conclude with thoughts on the potential of upcoming and proposed facilities to resolve similar structures around a greatly expanded sample of nearby debris systems.

Stapelfeldt, Karl↗

Subaru/HiCIAO HK(sub S) Imaging of LKHa 330: Multi-Band Detection of the Gap and Spiral-Like Structures

We present H- and K s-bands observations of the LkHα 330 disk with a multi-band detection of the large gap and spiral-like structures. The morphology of the outer disk (r ~ 0."3) at PA = 0°–45° and PA° = 180–290° is likely density wave-induced spirals, and comparison between our observational results and simulations suggests a planet formation. We have also investigated the azimuthal profiles at the ring and the outer-disk regions as well as radial profiles in the directions of the spiral-like structures and semimajor axis. Azimuthal analysis shows a large variety in wavelength and implies that the disk has non-axisymmetric dust distributions. The radial profiles in the major-axis direction (PA = 271°) suggest that the outer region (r ≥ 0."25) may be influenced by shadows of the inner region of the disk. The spiral-like directions (PA = 10° and 230°) show different radial profiles, which suggests that the surfaces of the spiral-like structures are highly flared and/or have different dust properties. Finally, a color map of the disk shows a lack of an outer eastern region in the H-band disk, which may hint at the presence of an inner object that casts a directional shadow onto the disk.

H- and Ks-bands observations↗

Dual factors required for cytochrome-P450-mediated hydrocarbon ring contraction in bacterial gibberellin phytohormone biosynthesis

Cytochromes P450 (CYPs) are heme-thiolate monooxygenases that prototypically catalyze the insertion of oxygen into unactivated C–H bonds but are capable of mediating more complex reactions. One of the most remarked-upon alternative reactions occurs during biosynthesis of the gibberellin A (GA) phytohormones, involving hydrocarbon ring contraction with coupled aldehyde extrusion of ent-kaurenoic acid to form the first gibberellin intermediate. While the unusual nature of this reaction has long been noted, its mechanistic basis has remained opaque. Building on identification of the relevant CYP114 from bacterial GA biosynthesis, detailed structure–function studies are reported here, including development of in vitro assays as well as crystallographic analyses both in the absence and presence of substrate. These structures provided insight into enzymatic catalysis of this unusual reaction, as exemplified by identification of a key role for the “missing” acid from an otherwise highly conserved acid–alcohol pair of residues. Notably, the results demonstrate that ring contraction requires dual factors, both the use of a dedicated ferredoxin and absence of the otherwise conserved acidic residue, with exclusion of either limiting turnover to just the initiating and more straightforward hydroxylation. The results provide detailed insight into the enzymatic structure–function relationships underlying this fascinating reaction and support the use of a semipinacol mechanism for the unusual ring contraction reaction.

59 BASIC BIOLOGICAL SCIENCES↗

Perturbation of 1 J C,F Coupling in Carbon–Fluorine Bonds on Coordination to Lewis Acids: A Structural, Spectroscopic, and Computational Study

A lithiated m-terphenyl ligand bearing fluorine atoms at the ortho positions of the flanking aryl rings was synthesized and characterized using single crystal X-ray diffraction, variable-temperature multinuclear NMR spectroscopy, and computational methods. Here, changes in 1 J C,F on coordination to lithium as a spectroscopic observable parametrizing the strength of the C–F···Li interaction are described, and a general, qualitative relationship between C–F bond lengths, Δ 1 J C,F values, and the extent of C–F bond activation as a result of Lewis acid coordination is proposed.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Probing Effects of Electron Addition to Polycyclic Conjugated Hydrocarbons Containing Four‐Membered Rings

The rectangular cyclobutadiene (CBD, C 4 H 4 ) is a unique moiety for building nonbenzenoid polycyclic conjugated hydrocarbons with interesting electron‐accepting properties. Herein, the investigation on chemical reduction of several CBD‐containing polycyclic hydrocarbons with increasing conjugation length is reported: biphenylene (C 12 H 8 ), dimethyl[2]naphthalene (C 22 H 16 ), and tetramethyl‐dibenzo‐[3]phenylene (C 30 H 22 ). The two‐step sequential reduction is first demonstrated by in situ spectroscopic investigation and then confirmed by the isolation of single crystals of the reduced products. The X‐ray crystallographic analysis reveals the formation of several mono‐ and doubly reduced products in solvent‐separated and complexed forms. The crystal structures for both neutral parents and corresponding reduced products unravel the changes in bond alternation in each ring of the fused systems. Density functional theory (DFT) and nucleus‐independent chemical shift (NICS) scan calculations reveal that the two‐electron addition reduces the aromatic character in the benzenoid rings but has minor influence on the antiaromatic CBD rings.

Zhu, Yikun [Department of Chemistry University at ↗

Modeling of a Generic Pebble Bed High-temperature Gas-cooled Reactor (PB-HTGR) with SAM

This report presents the modeling of the core of a generic pebble-bed reactor (PBR) at the system level using the System Analysis Module (SAM) code. This work is an extension of a previous work by the authors (Ooi et al. (2021)) that used the so-called 2-D ring model approach to model the PBMR-400. With the new approach, the pebble bed of the reactor is modeled with multiple PBCoreChannel components with spherical heat structures which allows the code to calculate thermal fluid parameters with built-in closure relations. The new core-channel approach is an improvement to the 2-D ring model approach as it does not introduce geometric distortions to the model and thus reduces the uncertainties of the predictions. In addition to thermal fluid simulations, point kinetics (PKE) are included to the model. Simulations are performed under a steady-state normal operation condition and a load-following transient scenario. This particular transient scenario is chosen as it tests both the thermal fluid and neutronics aspects of the model. The predicted results from both the steady-state and transient scenarios are compared with the results by Stew- art et al. (2021) who performed similar simulations with a Griffin-Pronghorn coupled tool. Despite the differences between the codes, with SAM being a system-analysis code and Pronghorn being a porous-medium code, both sets of results compare favorably. The over- all profiles and trends of the predicted temperatures and reactivities from the SAM and Griffin/Pronghorn simulations are similar, with some differences in their predicted values. The first part of the report covers the significance of a relatively fast-running approach that is capable of modeling the pebble bed reactor at the system-level while simultaneously capturing the radial thermal behavior of the core. Then, the modeling approach used in this work is discussed in details. Lastly, the results and comparisons with the Griffin/Pronghorn simulation are presented.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗