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At least 1,081 records · Page 60

Intermediate time sub-diffusion and stress relaxation in ring polymer melts

The slow dynamics of non-concatenated ring melts remains a frontier problem in polymer science with implications for many soft material environments including cellular biophysics. Here, in this work, we report large-scale simulations of model ring melts that analyze the monomer and center-of-mass (CM) mean square displacements (MSD) and stress relaxation function on intermediate time and length scales. The degree of dynamical slowing down is characterized by the maximally sub-diffusive fractional time scaling exponents. The data span an exceptionally wide range of ring degrees of polymerization and stiffnesses and are not successfully organized based on the classic measure linear chain entanglement, N/N e . Rather, we find that the crossover degree of polymerization, N D , based on ring macromolecular caging that successfully allows master curves to be constructed for the long-time CM self-diffusion constant also collapses these temporal dynamic scaling exponents. Different properties display different exponents and exhibit one or two regimes of linear variation with the logarithm of N D / N . A distinct crossover of the CM-MSD and stress relaxation exponents emerges at sufficiently large N or stiffness that is not found for the monomer MSD, indicating a novel form of dynamic decoupling. This crossover aligns with the predicted critical degree of polymerization for transitioning from a weak to strong caging regime, indicative of activated transport. The latter may reflect the emergence of an intermolecular collective contribution to stress in analogy with dense soft colloidal matter. Suggestions are made for future theoretical work to address the rich patterns of behavior discovered.

Anomalous diffusion↗

Yield reduction via the Knudsen layer effect in a mixture of fuel and pusher material

Hydrodynamic mix in inertial confinement fusion capsules produces chunk mix between deuterium-tritium fuel and inert pusher materials. The characteristic size of the intermingled fuel and pusher materials can be rapidly reduced by fluid mix, especially when the streamlines of the flow field are chaotic. This leads to an increasing Knudsen number for the fuel segments and a decreasing size of the pusher remnant with respect to the fuel ion mean-free-path. Finally, the former exacerbates Knudsen layer yield degradation due to fast ion losses, while the latter tends to alleviate Knudsen layer yield reduction due to other kinetic effects such as diffusive tunneling.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Floating dark matter in celestial bodies

Dark matter (DM) can be captured in celestial bodies after scattering and losing sufficient energy to become gravitationally bound. We derive a general framework that describes the current DM distribution inside celestial objects, which self-consistently includes the effects of concentration diffusion, thermal diffusion, gravity, and capture accumulation. For DM with sufficient interactions, we show that a significant DM population can thermalize and sit towards the celestial-body surface. This surface-enhanced DM distribution allows for new phenomenology for DM searches in a wide range of celestial bodies, including the Sun, Earth, Jupiter, Brown Dwarfs, and Exoplanets.

79 ASTRONOMY AND ASTROPHYSICS↗

Global gyrokinetic simulations of electrostatic microturbulent transport using kinetic electrons in LHD stellarator

Global gyrokinetic simulations of ion temperature gradient (ITG) and trapped electron mode (TEM) in the LHD stellarator are carried out using the gyrokinetic toroidal code (GTC) with kinetic electrons. ITG simulations show that kinetic electron effects increase the growth rate by more than 50% and more than double the turbulent transport levels compared with simulations using adiabatic electrons. Zonal flow dominates the saturation mechanism in the ITG turbulence. Nonlinear simulations of the TEM turbulence show that the main saturation mechanism is not the zonal flow but the inverse cascade of high to low toroidal harmonics. Further nonlinear simulations with various pressure profiles indicate that the ITG turbulence is more effective in driving heat conductivity whereas the TEM turbulence is more effective for particle diffusivity.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Modelling and simulation of brinicle formation

Below the Arctic sea ice, under the right conditions, a flux of icy brine flows down into the sea. The icy brine has a much lower fusion point and is denser than normal seawater. As a result, it sinks while freezing everything around it, forming an ice channel called a brinicle (also known as ice stalactite). In this paper, we develop a mathematical model for this phenomenon, assuming cylindrical symmetry. The fluid is considered to be viscous and quasi-stationary. The heat and salt transport are weakly coupled to the fluid motion and are modelled with the corresponding conservation equations, accounting for diffusive and convective effects. Finite-element discretization is employed to solve the coupled system of partial differential equations. We find that the model can capture the general behaviour of the physical system and generate brinicle-like structures while also recovering dendrite composition, which is a physically expected feature aligned with previous experimental results. This represents, to our knowledge, the first complete model proposed that captures the global structure of the physical phenomenon even though it has some discrepancies, such as brine accumulation.

97 MATHEMATICS AND COMPUTING↗

Quasi-one-dimensional uniform spin- 1 2 Heisenberg antiferromagnet KNaCuP 2 O 7 probed by P 31 and Na 23 NMR

Here we present the structural and magnetic properties of KNaCuP 2 O 7 investigated via x-ray diffraction, magnetization, specific heat, and P 31 and Na 23 NMR measurements and complementary electronic structure calculations. The temperature-dependent magnetic susceptibility and P 31 NMR shift could be modeled very well by the uniform spin- 1 2 Heisenberg antiferromagnetic chain model with a nearest-neighbor interaction J / k B ≃ 58.7 K . The corresponding mapping using first-principles electronic structure calculations leads to J DFT / k B ≃ 59 K with negligibly small interchain couplings, further confirming that the system is indeed a one-dimensional uniform spin- 1 2 Heisenberg antiferromagnet. The diverging trend of NMR spin-lattice relaxation rates ( 1 / T 1 31 and 1 / T 1 23 ) implies the onset of a magnetic long-range ordering at around T N ≃ 1 K . From the value of T N , the average interchain coupling is estimated to be J ' / k B ≃ 0.28 K . Moreover, the NMR spin-lattice relaxation rates show the dominant contributions from uniform ( q = 0 ) and staggered ( q = ± π / a ) spin fluctuations in the high- and low-temperature regimes, respectively, mimicking one-dimensionality of the spin lattice. We have also demonstrated that 1 / T 1 31 in high temperatures varies linearly with 1 / H , reflecting the effect of spin diffusion on the dynamic susceptibility. The temperature-dependent unit cell volume could be described well using the Debye approximation with a Debye temperature of Θ D ≃ 294 K , consistent with the heat capacity data.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Comparison of momentum transport models for numerical relativity

The main problems of nonvacuum numerical relativity, compact binary mergers and stellar collapse, involve hydromagnetic instabilities and turbulent flows, so that kinetic energy at small scales leads to mean effects at large scale that drive the secular evolution. Notable among these effects is momentum transport. We investigate two models of this transport effect, a relativistic Navier-Stokes system and a turbulent mean stress model, that are similar to all of the prescriptions that have been attempted to date for treating subgrid effects on binary neutron star mergers and their aftermath. Our investigation involves both stability analysis and numerical experimentation on star and disk systems. We also begin the investigation of the effects of particle and heat transport on postmerger simulations. Here, we find that correct handling of turbulent heating is crucial for avoiding unphysical instabilities. Given such appropriate handling, the evolution of a differentially rotating star and the accretion rate of a disk are reassuringly insensitive to the choice of prescription. However, disk outflows can be sensitive to the choice of method, even for the same effective viscous strength. We also consider the effects of eddy diffusion in the evolution of an accretion disk and show that it can interestingly affect the composition of outflows.

79 ASTRONOMY AND ASTROPHYSICS↗

Theoretical and experimental investigation of the equation of state of boron plasmas

We report a theoretical equation of state (EOS) table for boron across a wide range of temperatures (5.1 10 4 {5.2 10 8 K) and densities (0.25{49 g/cm 3 ), and experimental shock Hugoniot data at unprecedented high pressures (5608 118 GPa). The calculations are performed with first-principles methods combining path integral Monte Carlo (PIMC) at high temperatures and density functional theory molecular dynamics (DFT-MD) methods at lower temperatures. PIMC and DFT-MD cross-validate each other by providing coherent EOS (difference <1.5 Hartree/boron in energy and <5% in pressure) at 5.1 10 5 K. The Hugoniot measurement is conducted at the National Ignition Facility using a planar shock platform. The pressure-density relation found in our shock experiment is on top of the shock Hugoniot profile predicted with our first-principles EOS and a semi-empirical EOS table (LEOS 50). We investigate the self diffusivity and the effect of thermal and pressure-driven ionization on the EOS and shock compression behavior in high pressure and temperature conditions. We also study the sensitivity of a polar direct-drive exploding pusher platform to pressure variations based on applying pressure multipliers to LEOS 50 and by utilizing a new EOS model based on our ab initio simulations via 1D radiation-hydrodynamic calculations. The results are valuable for future theoretical and experimental studies and engineering design in high energy density research.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Equilibrium solute segregation to matrix- θ' precipitate interfaces in Al-Cu alloys from first principles

Particular combinations of solute atoms segregated to the interface of the Al and θ ' - Al 2 Cu in Al-Cu alloys can help stabilize θ ' precipitates at high temperatures. Stabilization of such precipitates is determined by a combination of thermodynamics (including driving forces for coarsening and transformation and solute segregation tendencies) and kinetic effects (including solute diffusion and interfacial mobility in the presence of interfacial solute segregation). For some alloys such as recent Al-Cu-based alloys, multiple solutes segregate in significant quantities to interfaces, and solute-solute interactions at the interface are important, with multiple types of solutes competing for similar interfacial sites. To treat this situation, we develop and apply a statistical mechanics approach to calculate the temperature-dependent equilibrium solute atoms distribution near the coherent and semicoherent interfaces between the Al matrix and the θ ' - Al 2 Cu precipitates. The developed approach is applied to the investigation of Si, Mn, and Zr segregation at the interface, as particular combinations of these elements affect the thermal stability of the θ ' precipitates. We demonstrate that because Si and Mn atoms segregate on the same semicoherent interface, the presence of Si reduces the concentration of Mn solutes at the interface. Si atoms preferably occupy the first layer of the interface and compete with Mn atoms for one type of particular sites in the layer. Mn atoms preferably occupy the second layer of the semicoherent interface, and the Mn-Mn interaction plays an important role in their distribution. Zr atoms mostly segregate on one of the two nonequivalent sites of the second layer of the coherent interface. Due to symmetry properties of the coherent interface, the calculations show that the segregation Zr of atoms to this interface will likely lead to the formation of L 1 2 ordered Al 3 Zr layer.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Electronic Structures and Magnetic Properties of Transition Metal Doped CsPbI{sub 3} Perovskite Compounds by First-Principles Calculation

Transition metal doped cesium lead halide (CsPbI{sub 3}) perovskite compounds were studied for application in photovoltaic solar cells. Electronic structures, chemical shifts of {sup 207}Pb and {sup 127}I-NMR, vibration modes in infrared and Raman spectra of transition metals (Mn{sup 2+}, Fe{sup 2+} or Cu{sup 2+})-doped CsPbI{sub 3} perovskite compounds were studied by the first-principles calculation using density functional theory. The CsPb(Fe)I{sub 3} perovskite crystals had a slight perturbation of crystal field in the coordination structure. The electron density distribution was delocalized on the 5p orbital of I atom, the 3d orbital of Fe atom and the 6p orbital of Pb atom. The first excited process was based on ligand metal charge transfer from the 5p orbital on I atom to the 3d orbital of Fe atom. The chemical shifts of {sup 127}I-NMR were associated with the electron correlation of electron-nuclear spin interaction and nuclear quadrupole interactions based on electron field graduate. The asymmetric vibrations of Pb–I bonds stretching mode related to electron conductivity with scattering of the carrier diffusion as phonon effectiveness. The slight perturbation of the coordination structure in the CsPb(Fe)I{sub 3} perovskite crystal will improve the photovoltaic and optical properties.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

PLUMECALC, Version 2.3.x

PLUMECALC is a post processor to random walk particle tracking simulations of subsurface solute transport. PLUMECALC takes results of a single particle tracking run without retention processes and incorporates the effects of matrix diffusion or other retention processes for a user-specified solute source.

Dash, Zora↗

Simulations and Data analysis for the 35 ton Liquid Argon detector as a prototype for the DUNE experiment

The Deep Underground Neutrino Experiment (DUNE) is a next-generation neutrino experiment which will be built at the Sanford Underground Research Facility (SURF), and will receive a wide-band neutrino beam from Fermilab, 1300~km away. At this baseline DUNE will be able to study many of the properties of neutrino mixing, including the neutrino mass hierarchy and the value of the CP-violating complex phase ($\delta_{CP}$). DUNE will utilise Liquid Argon (LAr) Time Projection Chamber (TPC) (LArTPC) technology, and the Far Detector (FD) will consist of four modules, each containing 17.1~kt of LAr with a fiducial mass of around 10~kt. Each of these FD modules represents around an order of magnitude increase in size, when compared to existing LArTPC experiments. \\ The 35 ton detector is the first DUNE prototype for the single (LAr) phase design of the FD. There were two running periods, one from November 2013 to February 2014, and a second from November 2015 to March 2016. During t he second running period, a system of TPCs was installed, and cosmic-ray data were collected. A method of particle identification was developed using simulations, though this was not applied to the data due to the higher than expected noise level. A new method of determining the interaction time of a track, using the effects of longitudinal diffusion, was developed using the cosmic-ray data. A camera system was also installed in the detector for monitoring purposes, and to look for high voltage breakdowns. \\ Simulations concerning the muon-induced background rate to nucleon decay are performed, following the incorporation of the MUon Simulations UNderground (MUSUN) generator into the DUNE software framework. A series of cuts which are based on Monte Carlo truth information is developed, designed to reject simulated background events, whilst preserving simulated signal events in the $n \rightarrow K^{+} + e^{-}$ decay channel. No background events are seen to survive the app lication of these cuts in a sample of 2~$\times$~10$^9$ muon! s, representing 401.6~years of detector live time. This corresponds to an annual background rate of <~0.44~events$\cdot$Mt$^{-1}\cdot$year$^{-1}$ at 90\% confidence, using a fiducial mass of 13.8~kt.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Predictive Large-Eddy Simulation of Supercritical-Pressure Reactive Flows in the Cold Ignition Regime

This report describes a one-year study performed under DOE sponsorship, continuing the investigation of high-pressure turbulent reactive flows. The interest is in the effect of the chemical species distribution in high-pressure turbulent flows in the presence of strong temperature gradients as would occur during reactions in realistic flows. The prime example of such flows are boundary layers in which the wall is at a lower temperature than that of the fluid, as would be the case in Diesel engines. Previous DOE BES work in the program further highlighted the importance of the boundary layer as a configuration for fundamental studies: soot formation in boundary layers is still a problem poorly understood and depends on the availability of particular chemical species at that location, and when boundary layer Large Eddy Simulations results were compared with measurements, the agreement was unfavorable, showing that this important ‘unit’ problem is not well understood. To understand this unit problem, modeling and Direct Numerical Simulations of this unit problem were conducted for the simplest possible multispecies system, that is a binary-species system. The results discovered a new phenomenon, that is, Soret effect induced uphill diffusion. The far-reaching implication is that through an imposed wall/fluid temperature difference it is possible to control the distribution of the species in the boundary layer. Because the results have been documented in one paper published in the refereed literature, and also in conference papers, this final report is in the form of an Executive Summary succinctly describing the results and putting them in perspective with respect to existing information. The refereed and conference papers published are individually listed as Appendices and attached to this report. One manuscript is still in progress and is thus not listed.

74 ATOMIC AND MOLECULAR PHYSICS↗

Crystal Growth in Gels from the Mechanisms of Crystal Growth to Control of Polymorphism: New Trends on Theoretical and Experimental Aspects

A gel can be considered to be a two-phase (liquid and solid) system, which lacks flow once it reaches a stationary state. The solid phase is usually a tridimensional polymeric mesh, while the liquid phase is usually found in three forms: contained in great cavities, retained in the capillary pores between micelles, or adsorbed on the surface of a micelle. The influence of the use of gels in crystal growth is diverse and depends on the type of gel being used. A decrease in solubility of any solute in the liquid may occur if the solvent interacts extensively with the polymeric section, hence, the nucleation in gels in these cases apparently occurs at relatively low supersaturations. However, if the pore size is small enough, there is a possibility that a higher supersaturation is needed, due to the compartmentalization of solvents. Finally, this may also represent an effect in the diffusion of substances. This review is divided into three main parts; the first evaluates the theory and practice used for the obtainment of polymorphs. The second part describes the use of gels into crystallogenesis of different substances. The last part is related to the particularities of protein crystal polymorphism, as well as modern trends in gel growth for high-resolution X-ray crystallography.

36 MATERIALS SCIENCE↗

A PDE Model of Breast Tumor Progression in MMTV-PyMT Mice

The evolution of breast tumors greatly depends on the interaction network among different cell types, including immune cells and cancer cells in the tumor. This study takes advantage of newly collected rich spatio-temporal mouse data to develop a data-driven mathematical model of breast tumors that considers cells’ location and key interactions in the tumor. The results show that cancer cells have a minor presence in the area with the most overall immune cells, and the number of activated immune cells in the tumor is depleted over time when there is no influx of immune cells. Interestingly, in the case of the influx of immune cells, the highest concentrations of both T cells and cancer cells are in the boundary of the tumor, as we use the Robin boundary condition to model the influx of immune cells. In other words, the influx of immune cells causes a dominant outward advection for cancer cells. We also investigate the effect of cells’ diffusion and immune cells’ influx rates in the dynamics of cells in the tumor micro-environment. Sensitivity analyses indicate that cancer cells and adipocytes’ diffusion rates are the most sensitive parameters, followed by influx and diffusion rates of cytotoxic T cells, implying that targeting them is a possible treatment strategy for breast cancer.

60 APPLIED LIFE SCIENCES↗

EXTENSION OF THE MURAM RADIATIVE MHD CODE FOR CORONAL SIMULATIONS

We present a new version of the MURaM radiative magnetohydrodynamics (MHD) code that allows for simulations spanning from the upper convection zone into the solar corona. We implement the relevant coronal physics in terms of optically thin radiative loss, field aligned heat conduction, and an equilibrium ionization equation of state. We artificially limit the coronal Alfvén and heat conduction speeds to computationally manageable values using an approximation to semi-relativistic MHD with an artificially reduced speed of light (Boris correction). We present example solutions ranging from quiet to active Sun in order to verify the validity of our approach. We quantify the role of numerical diffusivity for the effective coronal heating. We find that the (numerical) magnetic Prandtl number determines the ratio of resistive to viscous heating and that owing to the very large magnetic Prandtl number of the solar corona, heating is expected to happen predominantly through viscous dissipation. We find that reasonable solutions can be obtained with values of the reduced speed of light just marginally larger than the maximum sound speed. Overall this leads to a fully explicit code that can compute the time evolution of the solar corona in response to photospheric driving using numerical time steps not much smaller than 0.1 s. Numerical simulations of the coronal response to flux emergence covering a time span of a few days are well within reach using this approach.

79 ASTRONOMY AND ASTROPHYSICS↗

Global Simulations of the Inner Regions of Protoplanetary Disks with Comprehensive Disk Microphysics

The gas dynamics of weakly ionized protoplanetary disks (PPDs) are largely governed by the coupling between gas and magnetic fields, described by three non-ideal magnetohydrodynamical (MHD) effects (Ohmic, Hall, ambipolar). Previous local simulations incorporating these processes have revealed that the inner regions of PPDs are largely laminar and accompanied by wind-driven accretion. We conduct 2D axisymmetric, fully global MHD simulations of these regions (∼1–20 au), taking into account all non-ideal MHD effects, with tabulated diffusion coefficients and approximate treatment of external ionization and heating. With the net vertical field aligned with disk rotation, the Hall-shear instability strongly amplifies horizontal magnetic field, making the overall dynamics dependent on initial field configuration. Following disk formation, the disk likely relaxes into an inner zone characterized by asymmetric field configuration across the midplane, which smoothly transitions to a more symmetric outer zone. Angular momentum transport is driven by both MHD winds and laminar Maxwell stress, with both accretion and decretion flows present at different heights, and modestly asymmetric winds from the two disk sides. With anti-aligned field polarity, weakly magnetized disks settle into an asymmetric field configuration with supersonic accretion flow concentrated at one side of the disk surface, and highly asymmetric winds between the two disk sides. In all cases, the wind is magneto-thermal in nature, characterized by a mass loss rate exceeding the accretion rate. More strongly magnetized disks give more symmetric field configuration and flow structures. Deeper far-UV penetration leads to stronger and less stable outflows. Implications for observations and planet formation are also discussed.

79 ASTRONOMY AND ASTROPHYSICS↗