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All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Composition, Growth, Succession, and Function in the Cladophora Microbiome: Insights From Quantitative Stable Isotope Probing and NanoSIMS Imaging

The branching green macroalga Cladophora glomerata and its epiphytic microbiome dominate summer biomass in the Eel River, a Northern California river under Mediterranean (summer drought, winter rain) seasonality. Green Cladophora streamers proliferate in early summer, then change to yellow and then red-brown as epiphyte loads increase. Here, we characterised successional changes in epiphytic bacteria on Cladophora, examining both community composition and growth rates, using quantitative Stable Isotope Probing (qSIP) and 16S rRNA gene amplicon sequencing. The number of bacterial taxa increased with succession while growth rates peaked in the middle stage. NanoSIMS imaging confirmed high sulphur (S) concentrations in Cladophora cell walls relative to surrounding biomass, coinciding with a bloom of sulphur bacteria (bacteria that reduce or oxidise sulphur/sulphates). In general, relative abundances and growth rates were independent, indicating that either metric alone is insufficient for understanding how taxonomy and functional groups affect ecosystem processes. For instance, the relative abundance of nitrogen fixers peaked in the late summer when their relative growth rates were slowest. Such patterns may be driven by space competition limiting growth. Together, changes in abundance and relative growth rates suggest different limiting factors for different functional groups in the Cladophora microbiome at multiple successional stages.

Biological and medical sciences↗
NASA NTRS2000

Left ventricular hypertrophy in ascending aortic stenosis mice: anoikis and the progression to early failure

BACKGROUND: To determine potential mechanisms of the transition from hypertrophy to very early failure, we examined apoptosis in a model of ascending aortic stenosis (AS) in male FVB/n mice. METHODS AND RESULTS: Compared with age-matched controls, 4-week and 7-week AS animals (n=12 to 16 per group) had increased ratios of left ventricular weight to body weight (4.7+/-0.7 versus 3.1+/-0.2 and 5. 7+/-0.4 versus 2.7+/-0.1 mg/g, respectively, P<0.05) with similar body weights. Myocyte width was also increased in 4-week and 7-week AS mice compared with controls (19.0+/-0.8 and 25.2+/-1.8 versus 14. 1+/-0.5 microm, respectively, P<0.01). By 7 weeks, AS myocytes displayed branching with distinct differences in intercalated disk size and staining for beta(1)-integrin on both cell surface and adjacent extracellular matrix. In vivo left ventricular systolic developed pressure per gram as well as endocardial fractional shortening were similar in 4-week AS and controls but depressed in 7-week AS mice. Myocyte apoptosis estimated by in situ nick end-labeling (TUNEL) was extremely rare in 4-week AS and control mice; however, a low prevalence of TUNEL-positive myocytes and DNA laddering were detected in 7-week AS mice. The specificity of TUNEL labeling was confirmed by in situ ligation of hairpin oligonucleotides. CONCLUSIONS: Our findings indicate that myocyte apoptosis develops during the transition from hypertrophy to early failure in mice with chronic biomechanical stress and support the hypothesis that the disruption of normal myocyte anchorage to adjacent extracellular matrix and cells, a process called anoikis, may signal apoptosis.

NASA Discipline Cardiopulmonary↗
NASA NTRS2022

A Candle in the Wind: A Radio Filament in the Core of the A3562 Galaxy Cluster

Using a MeerKAT observation of the galaxy cluster A3562 (a member of the Shapley Supercluster), we have discovered a narrow, long and straight, very faint radio filament, which branches out at a straight angle from the tail of a radio galaxy located in projection near the core of the cluster. The radio filament spans 200 kpc and aligns with a sloshing cold front seen in the X-rays, staying inside the front in projection. The radio spectral index along the filament appears uniform (within large uncertainties) atα' −1.5. We propose that the radio galaxy is located outside the cold front, but dips its tail under the front. The tangential wind that blows there may stretch the radio plasma from the radio galaxy into a filamentary structure. Some reacceleration is needed in this scenario to maintain the radio spectrum uniform. Alternatively, the cosmic ray electrons from that spot in the tail can spread along the cluster magnetic field lines, straightened by that same tangential flow, via anomalously fast diffusion. Our radio filament can provide constraints on this process. We also uncover a compact radio source at the Brightest Cluster Galaxy (BCG) that is 2–3 orders of magnitude

S Giacintucci↗
DOE OSTI2025

Semiclassical transition state theory through the lens of the restricted partition function

The wide adoption of transition state theory in resolving the rates of molecular processes relies on the simplification from reducing the formal and numerical expense of dynamics by a geometric constraint. Such a reduction is at odds with the uncertainty in localization that the uncertainty principle requires. While many forms of semiclassical transition state theory (SCTST) have been aimed at addressing this challenge, a popular approach has relied on resolving the underlying phase space structure of the exact rate formula to leverage Bohr–Sommerfeld quantization. Here, the Hernandez–Miller SCTST reframed the thermal rate formula into an integral of the so-called restricted partition function (RPF) over the action associated with the reaction. The density-of-state SCTST has reframed the rate formula in terms of the instanton’s density of states (DoS). Here, we show the relationship between the RPF-SCTST and the DoS-SCTST and derive the latter from the former. In this way, we help unify these branches of SCTST and provide a clearer formalism for future advances.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
NASA NTRSDate not supplied

Model Assisted Probability of Detection for NASA Space Missions

Model assisted probability of detection (MAPOD) uses data from simulations to improve a traditional probability of detection (POD) study. This could include extending the parameter space to reduce uncertainty or substituting experimental data with simulated data to reduce the time and cost of a POD study. In the past MAPOD was difficult due to limited computational resources, but recent innovations in simulation tools and high-performance computing have made this type of high-degree-of-freedom modeling possible, and complex structures have made it necessary. This presentation will summarize the work done by the computational nondestructive evaluation (CNDE) specialists within the Nondestructive Evaluation Sciences branch at NASA Langley Research Center (LaRC) to complete a MAPOD study for phased array ultrasound testing (PAUT) of a friction stir welding (FSW) method to be used on Space Launch System (SLS) structures. The three critical needs for a MAPOD study are a validated and verified model of the inspection technique for the structure being inspected, some experimental POD data, and an uncertainty model for both the model and the experimental data. PAUT was simulated using Extende CIVA’s UT module. The model was validated using laboratory inspection data from NASA Marshall Space Flight Center (MSFC) for a Hit/Miss POD for FSW in 2219-T87 aluminum panels representative of those used in the SLS. This model was then used to simulate flaw sizes that were originally omitted from the original POD study. The results of this new MAPOD study will be presented along with a discussion of the methods and processes used to analyze the original data, selected simulation parameters, and development of the uncertainty model used for the statistical analysis. The goal of this effort is not just to improve the POD study but to demonstrate the value of MAPOD and provide a roadmap for application of MAPOD on future projects.

Elizabeth Gregory↗
DOE OSTI2022

Search for hidden-charm tetraquark with strangeness in e + e - → $K$ + $D^{*}_{s}$ - $D$ *0 + c.c.*

We report a search for a heavier partner of the recently observed Z cs (3985) - state, denoted as $Z^{'-}_{cs}$, in the process e + e - → $K$ + $D^{*}_{s}$ - $D$ *0 + c.c., based on e + e - collision data collected at the center-of-mass energies of $\sqrt{s}$ = 4.661, 4.682 and 4.699 GeV with the BESIII detector. The $Z^{'-}_{cs}$ is of interest as it is expected to be a candidate for a hidden-charm and open-strange tetraquark. A partial-reconstruction technique is used to isolate K + recoil-mass spectra, which are probed for a potential contribution from $Z^{'-}_{cs}$ → $D^{*}_{s}$ - $D$ *0 + (c.c.). We find an excess of $Z^{'-}_{cs}$ → $D^{*}_{s}$ - $D$ *0 + (c.c.) candidates with a significance of 2.1σ, after considering systematic uncertainties, at a mass of 4123.5 ± 0.7 stat. ± 4.7 syst. ) MeV/c 2 . As the data set is limited in size, the upper limits are evaluated at the 90% confidence level on the product of the Born cross sections (σ BORN ) and the branching fraction ($\mathcal{B}$) of $Z^{'-}_{cs}$ → $D^{*}_{s}$ - $D$ *0 , under different assumptions of the $Z^{'-}_{cs}$ mass from 4.120 to 4.140 MeV and of the width from 10 to 50 MeV at the three center-of-mass energies. The upper limits of σ BORN ∙ $\mathcal{B}$ are found to be at the level of $\mathcal{O}$(1) pb at each energy. Larger data samples are needed to confirm the $Z^{'-}_{cs}$ state and clarify its nature in the coming years.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2023

Attentional Ptycho-Tomography (APT) for three-dimensional nanoscale X-ray imaging with minimal data acquisition and computation time

Abstract Noninvasive X-ray imaging of nanoscale three-dimensional objects, such as integrated circuits (ICs), generally requires two types of scanning: ptychographic, which is translational and returns estimates of the complex electromagnetic field through the IC; combined with a tomographic scan, which collects these complex field projections from multiple angles. Here, we present Attentional Ptycho-Tomography (APT), an approach to drastically reduce the amount of angular scanning, and thus the total acquisition time. APT is machine learning-based, utilizing axial self-Attention for Ptycho-Tomographic reconstruction. APT is trained to obtain accurate reconstructions of the ICs, despite the incompleteness of the measurements. The training process includes regularizing priors in the form of typical patterns found in IC interiors, and the physics of X-ray propagation through the IC. We show that APT with ×12 reduced angles achieves fidelity comparable to the gold standard Simultaneous Algebraic Reconstruction Technique (SART) with the original set of angles. When using the same set of reduced angles, then APT also outperforms Filtered Back Projection (FBP), Simultaneous Iterative Reconstruction Technique (SIRT) and SART. The time needed to compute the reconstruction is also reduced, because the trained neural network is a forward operation, unlike the iterative nature of these alternatives. Our experiments show that, without loss in quality, for a 4.48 × 93.2 × 3.92 µm 3 IC (≃6 × 10 8 voxels), APT reduces the total data acquisition and computation time from 67.96 h to 38 min. We expect our physics-assisted and attention-utilizing machine learning framework to be applicable to other branches of nanoscale imaging, including materials science and biological imaging.

47 OTHER INSTRUMENTATION↗
DOE OSTI2022

A 100+ RON Gasoline Blendstock for High Efficiency, Low Emission Vehicles Engines - CRADA 493 (Final Report)

This study aimed at demonstrating production of a 100+RON gasoline fraction from a linear olefins feedstock to help improve further the viability and flexibility of the Pacific Northwest National Laboratory/ LanzaTech alcohol-to-jet (ATJ) patented process that converts ethanol from LanzaTech’s syngas fermentation process to low aromatic jet-range iso-paraffins. To achieve a high RON gasoline and ultimately a 100+RON, the technical approach consisted of converting the linear olefins into an iso-olefins rich mixture and then oligomerizing the iso-olefins rich mixture into high RON compounds in a single bed loaded with an acid catalyst that allows conversion at low reaction temperature. Three families of acid catalysts labeled as type A, B and C were investigated for the single-bed conversion of linear olefins into high RON gasoline range compounds. The effects of the nature of the catalyst, acid sites concentration and operating conditions were investigated. Fuel properties measurements and engine testing were conducted for the most promising catalyst. For type A catalysts, we demonstrated that the conversion increases with the increase of the Brönsted acid site concentration and that lower reaction temperature favors the formation of desired highly branched compounds. The highest dRON obtained with type A catalyst was equal to 94 (from NMR and IQT). Type B catalysts appear very effective for producing dimethyl-olefins compounds when operating at low reaction temperature (i.e., < 100°C). The highest dRON obtained with type B catalyst was equal to 92. The results suggest that type B catalysts are less favorable to internal conversion of linear olefins into iso-olefins compared to type A catalysts which leads to the formation of a gasoline blendstock with a lower dRON. A Type C catalyst that is less commonly used for production of gasoline range compounds from linear olefins was investigated due to its ability to favor conversion of linear olefins into iso-olefins. Compared to type A and type B catalyst, type C favors the formation of highly branched compounds (i.e., with 3+ methyl groups) in the gasoline range. Indeed, a gasoline blendstock containing about 33 wt.% of highly branched compounds was produced with type C catalyst while maintaining a high linear olefins conversion (i.e., 70%). A large quantity of this gasoline blendstock was produced and fuel properties measurements including engine testing for Research Octane Number (RON), Motor Octane Number (MON) and octane sensitivity (S) were conducted. A high RON = 97, MON = 82.7, S =14.3, AKI = 90 and HoV = 334.1kJ/kg were measured. While a RON of 100 was not achieved, the fuel properties of the gasoline blendstock are very acceptable as compared to current premium gasoline. Overall, these results highlight the potential for producing a high RON/ premium gasoline blendstock starting from a linear olefins feedstock.

02 PETROLEUM↗
DOE OSTI2023

Experimental Observations of the Topology of Convolutional Neural Network Activations

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of parameters associated with a series of transformations defined by the model architecture resulting in high-dimensional, difficult to interpret internal representations of input data. As DNNs become more ubiquitous across multiple sectors of our society, there is increasing recognition that mathematical methods are needed to aid analysts, researchers, and practitioners in understanding and interpreting how these models' internal representations relate to the final classification. In this paper we apply cutting edge techniques from TDA with the goal of gaining insight towards interpretability of convolutional neural networks used for image classification. We use two common TDA approaches to explore several methods for modeling hidden layer activations as high-dimensional point clouds, and provide experimental evidence that these point clouds capture valuable structural information about the model's process. First, we demonstrate that a distance metric based on persistent homology can be used to quantify meaningful differences between layers and discuss these distances in the broader context of existing representational similarity metrics for neural network interpretability. Second, we show that a mapper graph can provide semantic insight as to how these models organize hierarchical class knowledge at each layer. These observations demonstrate that TDA is a useful tool to help deep learning practitioners unlock the hidden structures of their models.

topological data analysis, deep learning↗
NASA NTRS2009

Johnson Space Center's Risk and Reliability Analysis Group 2008 Annual Report

The Johnson Space Center (JSC) Safety & Mission Assurance (S&MA) Directorate s Risk and Reliability Analysis Group provides both mathematical and engineering analysis expertise in the areas of Probabilistic Risk Assessment (PRA), Reliability and Maintainability (R&M) analysis, and data collection and analysis. The fundamental goal of this group is to provide National Aeronautics and Space Administration (NASA) decisionmakers with the necessary information to make informed decisions when evaluating personnel, flight hardware, and public safety concerns associated with current operating systems as well as with any future systems. The Analysis Group includes a staff of statistical and reliability experts with valuable backgrounds in the statistical, reliability, and engineering fields. This group includes JSC S&MA Analysis Branch personnel as well as S&MA support services contractors, such as Science Applications International Corporation (SAIC) and SoHaR. The Analysis Group s experience base includes nuclear power (both commercial and navy), manufacturing, Department of Defense, chemical, and shipping industries, as well as significant aerospace experience specifically in the Shuttle, International Space Station (ISS), and Constellation Programs. The Analysis Group partners with project and program offices, other NASA centers, NASA contractors, and universities to provide additional resources or information to the group when performing various analysis tasks. The JSC S&MA Analysis Group is recognized as a leader in risk and reliability analysis within the NASA community. Therefore, the Analysis Group is in high demand to help the Space Shuttle Program (SSP) continue to fly safely, assist in designing the next generation spacecraft for the Constellation Program (CxP), and promote advanced analytical techniques. The Analysis Section s tasks include teaching classes and instituting personnel qualification processes to enhance the professional abilities of our analysts as well as performing major probabilistic assessments used to support flight rationale and help establish program requirements. During 2008, the Analysis Group performed more than 70 assessments. Although all these assessments were important, some were instrumental in the decisionmaking processes for the Shuttle and Constellation Programs. Two of the more significant tasks were the Space Transportation System (STS)-122 Low Level Cutoff PRA for the SSP and the Orion Pad Abort One (PA-1) PRA for the CxP. These two activities, along with the numerous other tasks the Analysis Group performed in 2008, are summarized in this report. This report also highlights several ongoing and upcoming efforts to provide crucial statistical and probabilistic assessments, such as the Extravehicular Activity (EVA) PRA for the Hubble Space Telescope service mission and the first fully integrated PRAs for the CxP's Lunar Sortie and ISS missions.

Valentine, Mark↗
DOE OSTI2023

OH Roaming and Beyond in the Unimolecular Decay of the Methyl-Ethyl-Substituted Criegee Intermediate: Observations and Predictions

Alkene ozonolysis generates short-lived Criegee intermediates that are a significant source of hydroxyl (OH) radicals. Here this study demonstrates that roaming of the separating OH radicals can yield alternate hydroxycarbonyl products, thereby reducing the OH yield. Specifically, hydroxybutanone has been detected as a stable product arising from roaming in the unimolecular decay of the methyl-ethyl-substituted Criegee intermediate (MECI) under thermal flow cell conditions. The dynamical features of this novel multistage dissociation plus a roaming unimolecular decay process have also been examined with ab initio kinetics calculations. Experimentally, hydroxybutanone isomers are distinguished from the isomeric MECI by their higher ionization threshold and distinctive photoionization spectra. Moreover, the exponential rise of the hydroxybutanone kinetic time profile matches that for the unimolecular decay of MECI. A weaker methyl vinyl ketone (MVK) photoionization signal is also attributed to OH roaming. Complementary multireference electronic structure calculations have been utilized to map the unimolecular decay pathways for MECI, starting with 1,4 H atom transfer from a methyl or methylene group to the terminal oxygen, followed by roaming of the separating OH and butanonyl radicals in the long-range region of the potential. Roaming via reorientation and the addition of OH to the vinyl group of butanonyl is shown to yield hydroxybutanone, and subsequent C–O elongation and H-transfer can lead to MVK. A comprehensive theoretical kinetic analysis has been conducted to evaluate rate constants and branching yields (ca. 10–11%) for thermal unimolecular decay of MECI to conventional and roaming products under laboratory and atmospheric conditions, consistent with the estimated experimental yield (ca. 7%).

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
NASA NTRS2009

Detection, Identification, Location, and Remote Sensing Using SAW RFID Sensor Tags

The Electromagnetic Systems Branch (EV4) of the Avionic Systems Division at NASA Johnson Space Center in Houston, TX is studying the utility of surface acoustic wave (SAW) radiofrequency identification (RFID) tags for multiple wireless applications including detection, identification, tracking, and remote sensing of objects on the lunar surface, monitoring of environmental test facilities, structural shape and health monitoring, and nondestructive test and evaluation of assets. For all of these applications, it is anticipated that the system utilized to interrogate the SAW RFID tags may need to operate at fairly long range and in the presence of considerable multipath and multiple-access interference. Towards that end, EV4 is developing a prototype SAW RFID wireless interrogation system for use in such environments called the Passive Adaptive RFID Sensor Equipment (PARSED) system. The system utilizes a digitally beam-formed planar receiving antenna array to extend range and provide direction-of-arrival information coupled with an approximate maximum-likelihood signal processing algorithm to provide near-optimal estimation of both range and temperature. The system is capable of forming a large number of beams within the field of view and resolving the information from several tags within each beam. The combination of both spatial and waveform discrimination provides the capability to track and monitor telemetry from a large number of objects appearing simultaneously within the field of view of the receiving array. In this paper, we will consider the application of the PARSEQ system to the problem of simultaneous detection, identification, localization, and temperature estimation for multiple objects. We will summarize the overall design of the PARSEQ system and present a detailed description of the design and performance of the signal detection and estimation algorithms incorporated in the system. The system is currently configured only to measure temperature (jointly with range and tag ID), but future versions will be revised to measure parameters other than temperature as SAW tags capable of interfacing with external sensors become available. It is anticipated that the estimation of arbitrary parameters measured using SAW-based sensors will be based on techniques very similar to the joint range and temperature estimation techniques described in this paper.

Barton, Richard J.↗
NASA NTRS2002

Biomass-burning Aerosols in South East-Asia: Smoke Impact Assessment(BASE-ASIA)

Biomass burning has been a regular practice for land clearing and land conversion in many countries, especially in Africa, South America, and South East Asia. Significant global sources of greenhouse gases (e.g., CO2, CH4), chemically active gases (e.g., NO, CO, HC, CH3Br), and atmospheric aerosols are produced by biomass-burning processes, which influence the Earth-atmosphere energetics and hence impact both global climate and tropospheric chemistry. Some gases and aerosols can serve as active cloud condensation nuclei, which play important role in determining the net radiation budget, precipitation rate, and cloud lifetime. Biomass burning also affects the biogeochemical cycling of nitrogen and carbon compounds from the soil to the atmosphere; the hydrological cycle (i.e., run off and evaporation); the reflectivity and emissivity of the land; and the stability of ecosystems and ecosystem biodiversity. Compared to Africa and South America, the climatology in South East Asia reveals quite different characteristics, showing distinct large-scale smoke and cloud sources and interaction regimes. The fresh water distribution in this region is highly dependent on monsoon rainfall; in fact, the predictability of the tropical climate system is much reduced during the boreal spring, which is associated with the peak season of biomass burning activities. Estimating the burning fuel (e.g., bark, branches, and wood), an important part of studying regional carbon cycle, may rely on utilizing a wide range of distinctive spectral features in the shortwave and longwave regions. Therefore, to accurately assess the impact of smoke aerosols in this region requires continuous observations from satellites, aircraft, networks of ground-based instruments and dedicated field experiments. A new initiative will be proposed and discussed.

Tsay, Si-Chee↗
DOE OSTI2020

A Quantum-Based Approach to Predict Primary Radiation Damage in Polymeric Networks

Initial atomistic-level radiation damage in chemically reactive materials is thought to induce reaction cascades that can result in undesirable degradation of macroscale properties. Ensembles of quantum-based molecular dynamics (QMD) simulations can accurately predict these cascades, but extracting chemical insights from the many underlying trajectories is a labor-intensive process that can require substantial a priori intuition. We develop here a general and automated graph-based approach to extract all chemically distinct structures sampled in QMD simulations and apply our approach to predict primary radiation damage of polydimethylsiloxane (PDMS), the main constituent of silicones. A postprocessing protocol is developed to identify underlying polymer backbone structures as connected components in QMD trajectories. Furthermore, these backbones form a repository of radiation-damaged structures. A scheme for extracting and updating a library of isomorphically distinct structures is proposed to identify the spanning set and aid chemical interpretation of the repository. The analyses are applied to ensembles of cascade QMD simulations in which the four element types in PDMS are selectively excited in primary knock-on atom events. Our approach reveals a much higher degree of combinatorial complexity in this system than was inferred through radiolysis experiments. Probabilities are extracted for radiation-induced network changes including formation of branch points, carbon linkages, cycles, bond scissions, and carbon uptake into the Si–O siloxane backbone network. The general analysis framework presented here is readily extendable to modeling chemical degradation of other polymers and molecular materials and provides a basis for future quantum-informed multiscale modeling of radiation damage.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Search for charged-lepton flavor violation in the production and decay of top quarks using trilepton final states in proton-proton collisions at $\sqrt{s}$ =13 TeV

A search is performed for charged-lepton flavor violating processes in top quark (𝑡) production and decay. The data were collected by the CMS experiment from proton-proton collisions at a center-of-mass energy of 13 TeV and correspond to an integrated luminosity of 138 fb −1 . The selected events are required to contain one opposite-sign electron-muon pair, a third charged lepton (electron or muon), and at least one jet of which no more than one is associated with a bottom quark. Boosted decision trees are used to distinguish signal from background, exploiting differences in the kinematics of the final states particles. The data are consistent with the standard model expectation. Upper limits at 95% confidence level are placed in the context of effective field theory on the Wilson coefficients, which range between 0.024–0.424 TeV −2 depending on the flavor of the associated light quark and the Lorentz structure of the interaction. These limits are converted to upper limits on branching fractions involving up (charm) quarks, 𝑡 → 𝑒⁢𝜇⁢𝑢 (𝑡 → 𝑒⁢𝜇⁢𝑐), of 0.032⁢(0.498) × 10 −6 , 0.022⁢(0.369) × 10 −6 , and 0.012⁢(0.216) × 10 −6 for tensorlike, vectorlike, and scalarlike interactions, respectively.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
NASA NTRS2003

Transmission Electron Microscopy of Non-Etched Presolar Silicon Carbide

Our solar system formed from nuclei produced in earlier generations of stars. Mixing in the proto-solar nebula isotopically homogenized most of this material, but some grains, called presolar grains, retain their original isotopic composition. The isotopic properties of presolar SiC grains indicate that most of the grains formed in the outflows of carbon-rich Asymptotic Giant Branch (AGB) stars. The microstructure of these presolar grains reflects the conditions of the dust formation and subsequent alteration. Early microstructural studies of SiC grains obtained by acid dissolution from meteorites show that most isotopically anomalous SiC grains have the face-centered cubic b- SiC structure. However, Daulton et al. have shown that a small fraction of sub-micron presolar SiC grains are of the hexagonal 2H polytype (a-SiC). Although the harsh chemical treatments of these grains does not alter their crystal structure, significant alteration of the surface morphology of the grains due to the acid treatments has been observed. In addition, the acid treatments may preferentially remove cracked or fissured grains, and possible sub-grains, such as graphite. By studying SiC grains isolated by physical separation and found in situ, we attempt to obtain a more complete analysis of presolar SiC microstructures, including the surface morphology, in order to address the formation and processing history of the grains. In our prior work, we reported on one in situ SiC grain (hereafter CBIS1). Here we present results from two additional grains, one in situ, and one prepared as a physical separate.

Stroud, Rhonda M.↗
DOE OSTI2020

Regional climate change projections from NA-CORDEX and their relation to climate sensitivity

Abstract The climate sensitivity of global climate models (GCMs) strongly influences projected climate change due to increased atmospheric carbon dioxide. Reasonably, the climate sensitivity of a GCM may be expected to affect dynamically downscaled projections. However, there has been little examination of the effect of the climate sensitivity of GCMs on regional climate model (RCM) ensembles. Therefore, we present projections of temperature and precipitation from the ensemble of projections produced as a part of the North American branch of the international Coordinated Regional Downscaling Experiment (NA-CORDEX) in the context of their relationship to the climate sensitivity of their parent GCMs. NA-CORDEX simulations were produced at 50-km and 25-km resolutions with multiple RCMs which downscaled multiple GCMs that spanned nearly the full range of climate sensitivity available in the CMIP5 archive. We show that climate sensitivity is a very important source of spread in the NA-CORDEX ensemble, particularly for temperature. Temperature projections correlate with driving GCM climate sensitivity annually and seasonally across North America not only at a continental scale but also at a local-to-regional scale. Importantly, the spread in temperature projections would be reduced if only low, mid, or high climate sensitivity simulations were considered, or if only the ensemble mean were considered. Precipitation projections correlate with climate sensitivity, but only at a continental scale during the cold season, due to the increasing influence of other processes at finer scales. Additionally, it is shown that the RCMs do alter the projection space sampled by their driving GCMs.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Novel Gloeobacterales spp. from Diverse Environments across the Globe

Photosynthetic Cyanobacteria and their descendants are the only known organisms capable of oxygenic photosynthesis. Their metabolism permanently changed the Earth’s surface and the evolutionary trajectory of life, but little is known about their evolutionary history. Genomes of the Gloeobacterales, an order of deeply divergent photosynthetic Cyanobacteria, may hold clues about the evolutionary process. However, there are only three published genomes within this order, and it is difficult to make broad inferences based on such little data. Here, I describe five species within the Gloeobacterales retrieved from publicly available databases and examine their photosynthetic gene content and the environments in which Gloeobacterales genomes and 16S rRNA gene sequences are found. The Gloeobacterales contain reduced photosystems and inhabit cold, wet-rock, and low-light environments. They are likely present in low abundances due to their low growth rate. Future searches for Gloeobacterales should target these environments, and samples should be deeply sequenced to capture the low-abundance taxa. Publicly available databases contain undescribed taxa within the Gloeobacterales. However, searching through all available data with current methods is computationally expensive. Therefore, new methods must be developed to search for these and other evolutionarily important taxa. Once identified, these novel photosynthetic Cyanobacteria will help illuminate the origin and evolution of oxygenic photosynthesis. Early branching photosynthetic Cyanobacteria such as the Gloeobacterales may provide clues into the evolutionary history of oxygenic photosynthesis, but there are few genomes or cultured taxa from this order. Five new metagenome-assembled genomes suggest that members of the Gloeobacterales all contain reduced photosystems and lack genes associated with thylakoids and circadian rhythms. Their distribution suggests that they may thrive in environments that are marginal for other species, including wet-rock and cold environments. These traits may aid in the discovery and cultivation of novel species in this clade.

59 BASIC BIOLOGICAL SCIENCES↗